Query 000830
Match_columns 1265
No_of_seqs 812 out of 4512
Neff 8.3
Searched_HMMs 46136
Date Tue Apr 2 00:16:49 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000830.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000830hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 7E-219 1E-223 1993.8 129.0 1209 40-1257 12-1226(1228)
2 PTZ00265 multidrug resistance 100.0 4E-174 9E-179 1723.9 152.3 1206 39-1256 43-1465(1466)
3 KOG0054 Multidrug resistance-a 100.0 1E-169 2E-174 1597.8 123.6 1087 125-1257 262-1376(1381)
4 PLN03130 ABC transporter C fam 100.0 9E-159 2E-163 1591.6 146.0 1151 60-1258 305-1476(1622)
5 PLN03232 ABC transporter C fam 100.0 1E-157 2E-162 1584.4 143.0 1145 60-1259 305-1474(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 4E-152 8E-157 1532.9 144.9 1155 62-1256 323-1520(1522)
7 PTZ00243 ABC transporter; Prov 100.0 3E-146 6E-151 1470.1 143.2 1156 60-1258 248-1548(1560)
8 TIGR01271 CFTR_protein cystic 100.0 3E-144 6E-149 1451.6 144.8 1139 70-1259 94-1455(1490)
9 KOG0058 Peptide exporter, ABC 100.0 2E-110 5E-115 979.2 67.4 574 41-622 133-706 (716)
10 KOG0058 Peptide exporter, ABC 100.0 3E-109 6E-114 969.8 67.5 573 683-1259 134-707 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 4E-103 8E-108 967.5 70.5 579 39-621 648-1226(1228)
12 COG2274 SunT ABC-type bacterio 100.0 2.2E-95 5E-100 894.2 68.3 609 1-620 100-708 (709)
13 COG2274 SunT ABC-type bacterio 100.0 1.9E-91 4.1E-96 859.3 71.3 562 685-1256 143-708 (709)
14 PRK11174 cysteine/glutathione 100.0 2.6E-87 5.5E-92 840.0 75.2 568 42-621 9-585 (588)
15 PTZ00265 multidrug resistance 100.0 1.8E-86 3.8E-91 884.4 75.8 571 42-620 812-1465(1466)
16 COG1132 MdlB ABC-type multidru 100.0 5.7E-86 1.2E-90 822.8 74.9 562 43-621 4-565 (567)
17 COG1132 MdlB ABC-type multidru 100.0 1.5E-85 3.3E-90 818.9 74.3 560 687-1258 7-566 (567)
18 TIGR01193 bacteriocin_ABC ABC- 100.0 7.7E-86 1.7E-90 841.7 71.6 605 1-618 100-707 (708)
19 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.4E-85 7.3E-90 832.9 74.6 598 1-620 86-685 (686)
20 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.4E-85 3.1E-90 840.3 71.5 605 1-617 100-709 (710)
21 TIGR00958 3a01208 Conjugate Tr 100.0 3.6E-85 7.8E-90 831.0 74.1 566 39-616 145-710 (711)
22 PRK11174 cysteine/glutathione 100.0 7.5E-85 1.6E-89 817.7 74.6 566 685-1258 11-586 (588)
23 TIGR00958 3a01208 Conjugate Tr 100.0 2.6E-84 5.6E-89 823.1 74.1 564 683-1253 148-711 (711)
24 TIGR03375 type_I_sec_LssB type 100.0 1.2E-84 2.6E-89 828.9 71.0 597 1-608 88-689 (694)
25 PRK11160 cysteine/glutathione 100.0 9.4E-83 2E-87 791.7 75.0 567 43-618 4-572 (574)
26 COG4988 CydD ABC-type transpor 100.0 1.3E-82 2.8E-87 733.6 69.9 551 61-621 5-556 (559)
27 TIGR01846 type_I_sec_HlyB type 100.0 7.3E-83 1.6E-87 811.7 73.7 606 1-620 86-692 (694)
28 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.1E-82 6.6E-87 805.8 75.8 555 691-1256 131-685 (686)
29 COG4988 CydD ABC-type transpor 100.0 7.1E-82 1.5E-86 727.5 69.3 550 701-1258 5-557 (559)
30 TIGR01193 bacteriocin_ABC ABC- 100.0 4.8E-82 1E-86 806.8 73.7 562 684-1254 144-707 (708)
31 PRK11160 cysteine/glutathione 100.0 1.6E-81 3.4E-86 780.8 74.6 564 686-1255 6-573 (574)
32 KOG0056 Heavy metal exporter H 100.0 1.2E-84 2.5E-89 714.5 39.9 554 59-624 218-778 (790)
33 PRK11176 lipid transporter ATP 100.0 4.8E-81 1E-85 783.0 76.0 566 43-620 13-579 (582)
34 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.7E-81 3.7E-86 802.8 73.4 561 684-1253 142-709 (710)
35 PRK10790 putative multidrug tr 100.0 3.3E-80 7.1E-85 775.7 76.9 566 43-622 11-577 (592)
36 PRK11176 lipid transporter ATP 100.0 2.5E-80 5.4E-85 776.6 74.8 567 685-1258 14-581 (582)
37 PRK10790 putative multidrug tr 100.0 3.1E-80 6.7E-85 775.9 75.4 565 686-1259 13-578 (592)
38 TIGR03375 type_I_sec_LssB type 100.0 3.1E-80 6.8E-85 788.4 73.6 553 685-1244 136-689 (694)
39 KOG0056 Heavy metal exporter H 100.0 2E-83 4.2E-88 704.9 37.9 503 751-1258 272-776 (790)
40 KOG0057 Mitochondrial Fe/S clu 100.0 9.3E-81 2E-85 703.8 59.2 554 59-621 33-587 (591)
41 TIGR02203 MsbA_lipidA lipid A 100.0 1.4E-79 3.1E-84 769.1 75.1 564 45-620 4-568 (571)
42 TIGR01846 type_I_sec_HlyB type 100.0 1.8E-79 3.8E-84 780.6 75.2 566 684-1256 127-692 (694)
43 TIGR01192 chvA glucan exporter 100.0 3.8E-79 8.3E-84 760.2 76.1 565 43-621 7-571 (585)
44 TIGR02868 CydC thiol reductant 100.0 7.7E-80 1.7E-84 762.7 69.4 525 45-579 3-529 (529)
45 PRK13657 cyclic beta-1,2-gluca 100.0 7.2E-79 1.6E-83 762.3 76.4 567 41-621 5-571 (588)
46 COG4987 CydC ABC-type transpor 100.0 2.9E-79 6.3E-84 691.6 64.0 507 742-1254 62-571 (573)
47 PRK10789 putative multidrug tr 100.0 6.8E-79 1.5E-83 757.3 72.2 543 70-622 9-552 (569)
48 KOG0057 Mitochondrial Fe/S clu 100.0 1.4E-79 3E-84 694.2 59.6 514 738-1258 74-588 (591)
49 TIGR02204 MsbA_rel ABC transpo 100.0 2.5E-78 5.4E-83 758.2 75.5 570 43-620 6-575 (576)
50 TIGR02203 MsbA_lipidA lipid A 100.0 2.7E-78 5.9E-83 757.6 74.6 565 686-1257 4-569 (571)
51 PRK13657 cyclic beta-1,2-gluca 100.0 1.7E-77 3.7E-82 749.8 75.9 564 684-1257 7-571 (588)
52 TIGR02868 CydC thiol reductant 100.0 1.4E-77 3.1E-82 742.5 68.9 520 687-1215 4-529 (529)
53 TIGR01192 chvA glucan exporter 100.0 1E-76 2.2E-81 738.5 76.4 565 684-1258 7-572 (585)
54 TIGR02857 CydD thiol reductant 100.0 5E-77 1.1E-81 737.6 70.9 525 58-591 5-529 (529)
55 TIGR02204 MsbA_rel ABC transpo 100.0 1.8E-76 3.8E-81 741.4 74.8 566 686-1256 8-575 (576)
56 PRK10789 putative multidrug tr 100.0 1.1E-76 2.3E-81 737.6 72.0 514 740-1258 38-552 (569)
57 COG4987 CydC ABC-type transpor 100.0 9.3E-77 2E-81 671.3 64.6 554 55-618 15-571 (573)
58 TIGR00957 MRP_assoc_pro multi 100.0 1.5E-76 3.3E-81 799.1 74.4 508 105-619 1009-1519(1522)
59 COG5265 ATM1 ABC-type transpor 100.0 4.5E-79 9.7E-84 667.5 40.0 491 759-1254 3-496 (497)
60 PLN03130 ABC transporter C fam 100.0 4.8E-76 1E-80 791.8 74.2 508 103-621 955-1475(1622)
61 COG1123 ATPase components of v 100.0 6.7E-78 1.4E-82 699.1 45.3 486 381-1256 5-532 (539)
62 TIGR01842 type_I_sec_PrtD type 100.0 3.2E-75 7E-80 722.0 72.3 532 59-607 9-542 (544)
63 TIGR02857 CydD thiol reductant 100.0 4.4E-75 9.5E-80 720.3 69.9 528 695-1227 2-529 (529)
64 PLN03232 ABC transporter C fam 100.0 8E-75 1.7E-79 781.4 72.0 512 103-621 952-1472(1495)
65 PTZ00243 ABC transporter; Prov 100.0 1.3E-74 2.9E-79 777.2 73.9 512 107-621 1004-1547(1560)
66 COG5265 ATM1 ABC-type transpor 100.0 1.6E-76 3.5E-81 647.4 41.0 490 124-618 5-496 (497)
67 TIGR01842 type_I_sec_PrtD type 100.0 3.3E-73 7.2E-78 704.0 71.8 538 693-1243 3-542 (544)
68 PRK10261 glutathione transport 100.0 2.9E-74 6.3E-79 718.8 50.1 504 381-1254 12-565 (623)
69 TIGR01194 cyc_pep_trnsptr cycl 100.0 5.5E-72 1.2E-76 692.6 67.0 534 42-599 4-551 (555)
70 PRK13549 xylose transporter AT 100.0 3.2E-74 7E-79 706.1 45.0 462 381-1242 5-493 (506)
71 PRK15134 microcin C ABC transp 100.0 1.8E-73 3.9E-78 703.3 48.6 470 381-1249 5-521 (529)
72 PRK09700 D-allose transporter 100.0 5.2E-73 1.1E-77 696.8 45.4 459 381-1240 5-495 (510)
73 PRK10762 D-ribose transporter 100.0 1.5E-72 3.3E-77 690.5 46.3 454 381-1242 4-483 (501)
74 COG4172 ABC-type uncharacteriz 100.0 2.8E-72 6.1E-77 608.6 40.2 473 381-1253 6-526 (534)
75 TIGR01271 CFTR_protein cystic 100.0 8.2E-70 1.8E-74 731.3 73.5 500 113-622 937-1454(1490)
76 TIGR03269 met_CoM_red_A2 methy 100.0 1.6E-72 3.4E-77 694.2 41.6 457 382-1243 1-517 (520)
77 KOG0054 Multidrug resistance-a 100.0 2.6E-70 5.6E-75 693.8 62.6 510 102-618 859-1373(1381)
78 PRK11288 araG L-arabinose tran 100.0 3.5E-72 7.6E-77 687.3 44.2 456 381-1242 4-484 (501)
79 TIGR02633 xylG D-xylose ABC tr 100.0 9.1E-72 2E-76 684.7 46.9 460 382-1241 2-490 (500)
80 TIGR01257 rim_protein retinal- 100.0 8.5E-69 1.8E-73 708.4 77.8 220 380-608 927-1150(2272)
81 PRK15439 autoinducer 2 ABC tra 100.0 1.2E-71 2.7E-76 682.5 47.3 465 381-1243 11-492 (510)
82 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.2E-69 4.8E-74 669.4 65.8 531 684-1235 5-551 (555)
83 COG4618 ArpD ABC-type protease 100.0 8.9E-70 1.9E-74 607.9 53.0 499 737-1244 62-561 (580)
84 PRK10982 galactose/methyl gala 100.0 5.7E-71 1.2E-75 675.6 45.9 454 384-1242 1-479 (491)
85 COG4618 ArpD ABC-type protease 100.0 3.7E-69 7.9E-74 602.9 50.7 530 63-608 30-561 (580)
86 PRK10938 putative molybdenum t 100.0 6E-70 1.3E-74 667.0 44.2 453 381-1236 3-485 (490)
87 TIGR00956 3a01205 Pleiotropic 100.0 2.1E-68 4.5E-73 711.4 58.0 213 1017-1240 759-990 (1394)
88 PRK15064 ABC transporter ATP-b 100.0 1.3E-68 2.7E-73 660.4 50.3 478 382-1243 2-525 (530)
89 PRK10522 multidrug transporter 100.0 2.6E-66 5.6E-71 642.3 67.1 523 48-603 6-535 (547)
90 PRK11819 putative ABC transpor 100.0 1E-66 2.2E-71 645.0 52.0 482 381-1244 6-534 (556)
91 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.1E-66 4.6E-71 642.3 51.0 480 381-1243 4-531 (552)
92 PRK10522 multidrug transporter 100.0 1.1E-64 2.3E-69 627.8 66.1 471 751-1241 61-537 (547)
93 TIGR00954 3a01203 Peroxysomal 100.0 1E-63 2.2E-68 626.2 63.1 532 41-593 77-653 (659)
94 PRK10636 putative ABC transpor 100.0 5.5E-65 1.2E-69 635.4 50.3 201 1017-1243 312-517 (638)
95 PLN03140 ABC transporter G fam 100.0 2.7E-64 5.9E-69 667.8 59.7 214 1016-1239 866-1106(1470)
96 COG1129 MglA ABC-type sugar tr 100.0 4.9E-64 1.1E-68 580.0 42.5 455 381-1240 8-487 (500)
97 PRK11147 ABC transporter ATPas 100.0 2.6E-63 5.6E-68 622.5 51.4 201 1017-1243 319-528 (635)
98 PLN03073 ABC transporter F fam 100.0 1.1E-63 2.4E-68 623.3 46.6 201 1016-1242 507-713 (718)
99 PRK13409 putative ATPase RIL; 100.0 5.7E-63 1.2E-67 607.3 37.1 193 1017-1238 340-537 (590)
100 TIGR00954 3a01203 Peroxysomal 100.0 7.8E-60 1.7E-64 591.1 63.3 526 684-1229 79-653 (659)
101 COG3845 ABC-type uncharacteriz 100.0 1.7E-61 3.7E-66 544.5 41.8 462 381-1240 4-489 (501)
102 COG0488 Uup ATPase components 100.0 1.3E-60 2.8E-65 568.9 45.2 482 381-1243 3-525 (530)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.7E-53 3.6E-58 476.4 27.4 238 1016-1257 1-238 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 4.3E-52 9.3E-57 421.1 21.6 220 381-610 2-228 (240)
105 COG1126 GlnQ ABC-type polar am 100.0 7.6E-50 1.6E-54 404.8 22.3 218 1017-1248 2-230 (240)
106 COG1135 AbcC ABC-type metal io 100.0 5.1E-50 1.1E-54 426.6 21.3 223 382-611 2-235 (339)
107 PRK14257 phosphate ABC transpo 100.0 7.5E-49 1.6E-53 450.3 26.4 228 1012-1247 75-317 (329)
108 COG1125 OpuBA ABC-type proline 100.0 1.8E-49 3.9E-54 408.9 19.0 224 382-613 2-231 (309)
109 COG1135 AbcC ABC-type metal io 100.0 3.6E-49 7.9E-54 420.2 21.5 226 1018-1254 2-243 (339)
110 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.8E-48 3.9E-53 435.8 27.5 237 380-620 1-237 (275)
111 COG1117 PstB ABC-type phosphat 100.0 7.2E-49 1.6E-53 395.0 19.6 221 380-610 6-240 (253)
112 KOG0927 Predicted transporter 100.0 7.7E-48 1.7E-52 434.2 29.4 193 1017-1234 389-586 (614)
113 COG1117 PstB ABC-type phosphat 100.0 6.3E-48 1.4E-52 388.2 18.2 221 1016-1246 6-240 (253)
114 cd03252 ABCC_Hemolysin The ABC 100.0 3E-46 6.6E-51 414.1 27.4 235 1018-1254 1-235 (237)
115 COG1125 OpuBA ABC-type proline 100.0 4.3E-47 9.4E-52 391.3 18.9 222 1018-1253 2-235 (309)
116 cd03288 ABCC_SUR2 The SUR doma 100.0 3.9E-46 8.4E-51 417.2 28.2 241 1014-1256 16-256 (257)
117 PRK14257 phosphate ABC transpo 100.0 1.8E-46 4E-51 430.5 26.1 226 377-610 76-316 (329)
118 COG4615 PvdE ABC-type sideroph 100.0 4.3E-43 9.4E-48 379.8 46.7 470 108-599 55-529 (546)
119 KOG0065 Pleiotropic drug resis 100.0 3.5E-45 7.6E-50 451.9 33.6 207 397-606 128-350 (1391)
120 cd03252 ABCC_Hemolysin The ABC 100.0 1.9E-45 4.2E-50 407.7 26.8 234 382-617 1-234 (237)
121 COG1127 Ttg2A ABC-type transpo 100.0 7.1E-46 1.5E-50 381.9 21.2 228 380-617 7-245 (263)
122 COG3839 MalK ABC-type sugar tr 100.0 1.2E-45 2.6E-50 411.9 22.5 217 381-613 3-229 (338)
123 COG1120 FepC ABC-type cobalami 100.0 1.1E-45 2.3E-50 397.1 20.4 214 381-608 2-229 (258)
124 cd03253 ABCC_ATM1_transporter 100.0 9.5E-45 2.1E-49 402.0 26.9 234 1018-1254 1-234 (236)
125 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.1E-44 2.5E-49 401.7 26.7 235 1018-1253 1-235 (238)
126 cd03251 ABCC_MsbA MsbA is an e 100.0 9.7E-45 2.1E-49 401.4 26.0 233 1018-1252 1-233 (234)
127 cd03244 ABCC_MRP_domain2 Domai 100.0 1.5E-44 3.2E-49 396.3 26.3 221 1016-1238 1-221 (221)
128 cd03288 ABCC_SUR2 The SUR doma 100.0 2.4E-44 5.1E-49 402.8 28.4 240 377-618 15-254 (257)
129 cd03254 ABCC_Glucan_exporter_l 100.0 1.6E-44 3.5E-49 398.3 26.4 226 1016-1243 1-226 (229)
130 COG3638 ABC-type phosphate/pho 100.0 2.1E-45 4.5E-50 377.4 17.7 216 381-606 3-236 (258)
131 COG3842 PotA ABC-type spermidi 100.0 2E-45 4.3E-50 412.4 18.9 218 380-613 4-232 (352)
132 TIGR02314 ABC_MetN D-methionin 100.0 1E-44 2.2E-49 416.3 24.5 225 1018-1253 2-241 (343)
133 COG3840 ThiQ ABC-type thiamine 100.0 1.1E-44 2.3E-49 354.7 20.8 209 382-608 2-220 (231)
134 KOG0062 ATPase component of AB 100.0 4E-44 8.6E-49 402.1 28.2 211 1015-1257 360-575 (582)
135 COG2884 FtsE Predicted ATPase 100.0 5.6E-45 1.2E-49 360.3 18.3 207 382-601 2-220 (223)
136 COG1124 DppF ABC-type dipeptid 100.0 1.3E-44 2.7E-49 375.4 21.3 228 1017-1255 3-243 (252)
137 COG1116 TauB ABC-type nitrate/ 100.0 1.2E-44 2.6E-49 380.1 21.0 198 381-597 3-212 (248)
138 cd03253 ABCC_ATM1_transporter 100.0 4.8E-44 1E-48 396.4 26.8 233 382-617 1-233 (236)
139 cd03251 ABCC_MsbA MsbA is an e 100.0 4.3E-44 9.4E-49 396.2 26.4 226 382-608 1-226 (234)
140 COG1136 SalX ABC-type antimicr 100.0 3.7E-44 8E-49 377.7 24.5 209 382-597 2-221 (226)
141 cd03254 ABCC_Glucan_exporter_l 100.0 5.2E-44 1.1E-48 394.2 26.4 227 380-608 1-227 (229)
142 TIGR02314 ABC_MetN D-methionin 100.0 2.1E-44 4.6E-49 413.6 23.9 223 382-611 2-234 (343)
143 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 5.8E-44 1.3E-48 396.1 26.7 227 382-608 1-227 (238)
144 COG1124 DppF ABC-type dipeptid 100.0 1.9E-44 4.1E-49 374.1 20.8 226 381-616 3-240 (252)
145 COG1120 FepC ABC-type cobalami 100.0 2E-44 4.2E-49 387.4 21.4 213 1017-1243 2-228 (258)
146 COG3839 MalK ABC-type sugar tr 100.0 2.8E-44 6E-49 401.0 22.9 218 1017-1250 3-230 (338)
147 COG1127 Ttg2A ABC-type transpo 100.0 4.6E-44 1E-48 368.5 22.2 225 1016-1254 7-246 (263)
148 cd03245 ABCC_bacteriocin_expor 100.0 1.3E-43 2.8E-48 388.6 26.3 220 1016-1236 1-220 (220)
149 cd03244 ABCC_MRP_domain2 Domai 100.0 2E-43 4.4E-48 387.3 27.0 220 380-601 1-220 (221)
150 COG1122 CbiO ABC-type cobalt t 100.0 6E-44 1.3E-48 385.1 22.3 215 1017-1244 3-229 (235)
151 COG4615 PvdE ABC-type sideroph 100.0 6.9E-41 1.5E-45 362.7 45.8 474 741-1235 51-529 (546)
152 PRK13631 cbiO cobalt transport 100.0 2.3E-43 5.1E-48 403.8 27.8 221 1016-1243 20-265 (320)
153 COG1122 CbiO ABC-type cobalt t 100.0 6.2E-44 1.3E-48 385.1 21.0 215 381-608 3-229 (235)
154 COG3638 ABC-type phosphate/pho 100.0 8.5E-44 1.8E-48 365.6 20.4 222 1017-1254 3-245 (258)
155 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.5E-43 3.2E-48 378.2 22.7 210 381-608 4-228 (254)
156 cd03248 ABCC_TAP TAP, the Tran 100.0 2.3E-43 4.9E-48 388.1 24.5 219 1014-1232 8-226 (226)
157 COG2884 FtsE Predicted ATPase 100.0 6.8E-44 1.5E-48 352.7 17.9 208 1018-1238 2-221 (223)
158 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.9E-43 6.2E-48 376.0 24.0 218 1017-1254 4-236 (254)
159 cd03245 ABCC_bacteriocin_expor 100.0 5.7E-43 1.2E-47 383.4 26.9 219 381-600 2-220 (220)
160 COG3840 ThiQ ABC-type thiamine 100.0 1.9E-43 4.2E-48 345.9 20.2 210 1018-1245 2-221 (231)
161 COG1116 TauB ABC-type nitrate/ 100.0 2.1E-43 4.5E-48 370.9 21.4 197 1017-1232 3-211 (248)
162 cd03261 ABC_Org_Solvent_Resist 100.0 2.5E-43 5.5E-48 390.0 23.4 217 1018-1249 1-231 (235)
163 cd03260 ABC_PstB_phosphate_tra 100.0 2.1E-43 4.5E-48 388.7 22.1 212 1018-1241 1-227 (227)
164 PRK13631 cbiO cobalt transport 100.0 3.9E-43 8.4E-48 402.0 25.1 222 380-608 20-266 (320)
165 COG1136 SalX ABC-type antimicr 100.0 7.7E-43 1.7E-47 367.7 23.7 207 1018-1234 2-222 (226)
166 cd03248 ABCC_TAP TAP, the Tran 100.0 8.6E-43 1.9E-47 383.5 25.0 220 377-596 7-226 (226)
167 COG1118 CysA ABC-type sulfate/ 100.0 1.5E-43 3.2E-48 376.0 18.0 222 381-612 2-232 (345)
168 PRK14269 phosphate ABC transpo 100.0 7.8E-43 1.7E-47 388.5 24.6 223 1017-1249 2-236 (246)
169 PRK13650 cbiO cobalt transport 100.0 1E-42 2.2E-47 393.5 24.8 217 1017-1244 4-230 (279)
170 COG3842 PotA ABC-type spermidi 100.0 2.9E-43 6.2E-48 395.0 19.5 221 1016-1252 4-235 (352)
171 cd03369 ABCC_NFT1 Domain 2 of 100.0 2E-42 4.3E-47 375.1 25.3 206 1013-1238 2-207 (207)
172 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-42 3E-47 384.0 24.6 217 382-608 1-227 (235)
173 PRK11650 ugpC glycerol-3-phosp 100.0 1.6E-42 3.5E-47 401.8 26.1 219 1017-1250 3-231 (356)
174 PRK14250 phosphate ABC transpo 100.0 2.3E-42 5E-47 383.2 25.5 224 1017-1253 3-231 (241)
175 PRK11432 fbpC ferric transport 100.0 1.4E-42 3.1E-47 400.8 24.8 219 1017-1251 6-234 (351)
176 PRK11153 metN DL-methionine tr 100.0 1.9E-42 4.1E-47 401.1 25.3 223 1018-1251 2-238 (343)
177 PRK11650 ugpC glycerol-3-phosp 100.0 1.6E-42 3.5E-47 401.8 24.1 218 381-613 3-230 (356)
178 cd03260 ABC_PstB_phosphate_tra 100.0 1.7E-42 3.7E-47 381.5 23.0 210 382-605 1-227 (227)
179 PRK14273 phosphate ABC transpo 100.0 2.7E-42 5.8E-47 386.3 24.8 226 1016-1251 6-246 (254)
180 PRK11432 fbpC ferric transport 100.0 1.5E-42 3.3E-47 400.6 23.6 217 381-613 6-232 (351)
181 COG4178 ABC-type uncharacteriz 100.0 8.7E-39 1.9E-43 377.1 55.2 470 103-592 88-587 (604)
182 TIGR01186 proV glycine betaine 100.0 1.7E-42 3.8E-47 399.6 23.1 207 1033-1250 6-226 (363)
183 TIGR03265 PhnT2 putative 2-ami 100.0 2.5E-42 5.4E-47 399.7 24.2 218 1017-1250 4-231 (353)
184 TIGR00972 3a0107s01c2 phosphat 100.0 3.3E-42 7.2E-47 383.8 24.3 222 1018-1249 2-238 (247)
185 PRK13637 cbiO cobalt transport 100.0 5.8E-42 1.3E-46 388.7 26.6 217 1018-1243 3-234 (287)
186 PRK13647 cbiO cobalt transport 100.0 3.3E-42 7.1E-47 388.4 24.2 213 1017-1242 4-226 (274)
187 PRK10744 pstB phosphate transp 100.0 5.2E-42 1.1E-46 384.9 25.7 226 1014-1249 10-250 (260)
188 cd03219 ABC_Mj1267_LivG_branch 100.0 2.5E-42 5.4E-47 382.7 22.8 216 1018-1243 1-232 (236)
189 TIGR03265 PhnT2 putative 2-ami 100.0 2.3E-42 4.9E-47 400.1 23.0 221 381-613 4-230 (353)
190 PRK14242 phosphate transporter 100.0 4E-42 8.6E-47 384.9 24.2 220 1017-1246 6-240 (253)
191 COG4178 ABC-type uncharacteriz 100.0 1.2E-38 2.6E-43 375.9 54.4 467 741-1229 89-588 (604)
192 TIGR01186 proV glycine betaine 100.0 1.7E-42 3.7E-47 399.7 21.3 206 397-613 6-225 (363)
193 PRK11153 metN DL-methionine tr 100.0 3.9E-42 8.4E-47 398.5 24.1 222 382-610 2-233 (343)
194 cd03296 ABC_CysA_sulfate_impor 100.0 6.7E-42 1.5E-46 379.4 24.8 213 1018-1246 3-229 (239)
195 PRK14269 phosphate ABC transpo 100.0 5.4E-42 1.2E-46 381.7 24.1 218 381-608 2-231 (246)
196 PRK13650 cbiO cobalt transport 100.0 5E-42 1.1E-46 387.9 24.0 217 381-608 4-230 (279)
197 cd03219 ABC_Mj1267_LivG_branch 100.0 3.4E-42 7.4E-47 381.6 22.2 222 382-608 1-233 (236)
198 PRK13646 cbiO cobalt transport 100.0 8.6E-42 1.9E-46 387.4 25.4 219 1018-1243 3-235 (286)
199 cd03256 ABC_PhnC_transporter A 100.0 5.5E-42 1.2E-46 381.3 23.2 213 1018-1243 1-234 (241)
200 PRK13643 cbiO cobalt transport 100.0 6.5E-42 1.4E-46 388.5 24.2 216 1018-1243 2-233 (288)
201 PRK10851 sulfate/thiosulfate t 100.0 6.5E-42 1.4E-46 396.3 24.6 218 1017-1250 2-233 (353)
202 cd03263 ABC_subfamily_A The AB 100.0 4.6E-42 9.9E-47 376.3 22.1 211 1018-1241 1-219 (220)
203 PRK13635 cbiO cobalt transport 100.0 7.4E-42 1.6E-46 386.2 24.3 215 1017-1243 5-229 (279)
204 PRK09536 btuD corrinoid ABC tr 100.0 7.3E-42 1.6E-46 399.1 24.9 222 1017-1254 3-237 (402)
205 PRK13642 cbiO cobalt transport 100.0 1.1E-41 2.4E-46 385.0 25.6 216 1017-1243 4-229 (277)
206 PRK13643 cbiO cobalt transport 100.0 6.6E-42 1.4E-46 388.4 23.7 221 382-608 2-234 (288)
207 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.3E-42 9.3E-47 386.7 21.9 219 1019-1251 26-258 (269)
208 PRK14235 phosphate transporter 100.0 9.9E-42 2.1E-46 383.6 24.9 224 1014-1247 16-255 (267)
209 cd03224 ABC_TM1139_LivF_branch 100.0 6.7E-42 1.5E-46 375.7 22.9 217 1018-1243 1-221 (222)
210 PRK14267 phosphate ABC transpo 100.0 7.3E-42 1.6E-46 382.7 23.3 225 1017-1251 4-245 (253)
211 TIGR00960 3a0501s02 Type II (G 100.0 3.8E-42 8.3E-47 375.6 20.4 203 1018-1232 2-216 (216)
212 cd03258 ABC_MetN_methionine_tr 100.0 8.2E-42 1.8E-46 377.6 23.1 215 1018-1243 2-230 (233)
213 PRK13637 cbiO cobalt transport 100.0 9.5E-42 2E-46 386.9 24.2 220 382-608 3-235 (287)
214 PRK09452 potA putrescine/sperm 100.0 1.3E-41 2.7E-46 395.4 25.8 218 1016-1249 13-240 (375)
215 cd03291 ABCC_CFTR1 The CFTR su 100.0 5.2E-41 1.1E-45 377.1 29.9 222 1012-1253 34-256 (282)
216 PRK09452 potA putrescine/sperm 100.0 7.3E-42 1.6E-46 397.4 23.7 218 380-613 13-240 (375)
217 PRK14250 phosphate ABC transpo 100.0 1.7E-41 3.6E-46 376.3 25.5 221 381-615 3-229 (241)
218 TIGR03258 PhnT 2-aminoethylpho 100.0 7.6E-42 1.6E-46 396.0 23.6 220 1015-1250 3-235 (362)
219 cd03369 ABCC_NFT1 Domain 2 of 100.0 2.4E-41 5.1E-46 366.7 25.9 203 380-602 5-207 (207)
220 TIGR02315 ABC_phnC phosphonate 100.0 9.1E-42 2E-46 379.9 23.2 212 1018-1242 2-234 (243)
221 PRK13636 cbiO cobalt transport 100.0 1.1E-41 2.4E-46 385.9 24.2 214 1017-1243 5-231 (283)
222 PRK14247 phosphate ABC transpo 100.0 1.4E-41 3.1E-46 379.7 24.5 227 1017-1253 3-244 (250)
223 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1E-41 2.2E-46 378.8 23.1 221 1018-1249 1-231 (242)
224 TIGR03258 PhnT 2-aminoethylpho 100.0 7.5E-42 1.6E-46 396.0 22.7 223 379-613 3-234 (362)
225 PRK14273 phosphate ABC transpo 100.0 1.4E-41 3E-46 380.6 24.1 224 380-613 6-244 (254)
226 cd03259 ABC_Carb_Solutes_like 100.0 5.2E-42 1.1E-46 373.7 20.1 203 1018-1236 1-213 (213)
227 PRK10851 sulfate/thiosulfate t 100.0 1.1E-41 2.4E-46 394.3 24.1 221 381-613 2-232 (353)
228 TIGR00972 3a0107s01c2 phosphat 100.0 1.8E-41 4E-46 377.9 24.6 218 382-609 2-234 (247)
229 PRK14242 phosphate transporter 100.0 1.3E-41 2.9E-46 380.6 23.5 219 381-609 6-239 (253)
230 PRK15079 oligopeptide ABC tran 100.0 1.7E-41 3.6E-46 389.9 24.7 226 1017-1252 8-260 (331)
231 PRK13634 cbiO cobalt transport 100.0 2.1E-41 4.5E-46 384.7 25.2 216 1018-1243 3-235 (290)
232 PRK14259 phosphate ABC transpo 100.0 2.6E-41 5.7E-46 380.3 25.7 224 1016-1249 12-259 (269)
233 PRK10744 pstB phosphate transp 100.0 2.4E-41 5.3E-46 379.4 25.3 222 379-610 11-247 (260)
234 PRK11000 maltose/maltodextrin 100.0 1.5E-41 3.4E-46 396.5 24.4 218 1017-1250 3-230 (369)
235 PRK13646 cbiO cobalt transport 100.0 1.4E-41 3.1E-46 385.6 23.4 220 382-608 3-236 (286)
236 PRK14237 phosphate transporter 100.0 2.3E-41 4.9E-46 380.7 24.7 222 1015-1246 18-254 (267)
237 cd03296 ABC_CysA_sulfate_impor 100.0 1.6E-41 3.4E-46 376.5 23.0 215 382-608 3-227 (239)
238 cd03250 ABCC_MRP_domain1 Domai 100.0 2.4E-41 5.3E-46 365.7 24.0 200 1018-1231 1-204 (204)
239 cd03224 ABC_TM1139_LivF_branch 100.0 1.6E-41 3.4E-46 372.8 22.7 216 382-606 1-220 (222)
240 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.2E-41 4.7E-46 374.6 24.0 216 1018-1244 2-222 (236)
241 PRK13651 cobalt transporter AT 100.0 1.9E-41 4.2E-46 385.8 24.2 217 1018-1244 3-255 (305)
242 PRK13647 cbiO cobalt transport 100.0 2.2E-41 4.9E-46 381.6 24.5 212 381-605 4-225 (274)
243 PRK13634 cbiO cobalt transport 100.0 1.5E-41 3.3E-46 385.9 23.2 220 382-608 3-236 (290)
244 TIGR03005 ectoine_ehuA ectoine 100.0 2.1E-41 4.5E-46 378.6 24.0 218 1018-1249 1-242 (252)
245 PRK14268 phosphate ABC transpo 100.0 2E-41 4.4E-46 379.6 23.8 225 1016-1250 11-249 (258)
246 cd03256 ABC_PhnC_transporter A 100.0 1.7E-41 3.8E-46 377.3 23.0 220 382-605 1-232 (241)
247 PRK11831 putative ABC transpor 100.0 2.5E-41 5.3E-46 380.8 24.1 224 1017-1254 7-244 (269)
248 PRK14244 phosphate ABC transpo 100.0 1.1E-41 2.5E-46 380.5 21.2 223 1018-1250 6-244 (251)
249 PRK11629 lolD lipoprotein tran 100.0 1.9E-41 4.2E-46 374.3 22.7 210 1017-1237 5-228 (233)
250 PRK14236 phosphate transporter 100.0 3.1E-41 6.8E-46 380.6 24.9 223 1015-1247 23-260 (272)
251 PRK13633 cobalt transporter AT 100.0 2.6E-41 5.7E-46 382.6 24.3 217 1017-1244 4-234 (280)
252 PRK10070 glycine betaine trans 100.0 2.1E-41 4.6E-46 395.0 24.1 206 1034-1250 42-261 (400)
253 PRK14274 phosphate ABC transpo 100.0 3.4E-41 7.3E-46 378.3 24.9 224 1017-1250 12-250 (259)
254 PRK14251 phosphate ABC transpo 100.0 2E-41 4.3E-46 378.7 22.9 224 1017-1250 4-242 (251)
255 TIGR00960 3a0501s02 Type II (G 100.0 1.3E-41 2.8E-46 371.4 20.9 203 382-596 2-216 (216)
256 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.2E-41 4.8E-46 376.0 23.0 218 382-608 1-226 (242)
257 cd03258 ABC_MetN_methionine_tr 100.0 1.9E-41 4.1E-46 374.7 22.3 220 382-608 2-231 (233)
258 cd03266 ABC_NatA_sodium_export 100.0 2.2E-41 4.7E-46 370.4 22.5 207 1018-1236 2-218 (218)
259 PRK13651 cobalt transporter AT 100.0 2.2E-41 4.8E-46 385.4 23.3 220 382-608 3-255 (305)
260 PRK14240 phosphate transporter 100.0 4.2E-41 9.2E-46 375.9 25.1 224 1016-1249 2-240 (250)
261 TIGR02315 ABC_phnC phosphonate 100.0 2.5E-41 5.4E-46 376.4 23.1 220 382-605 2-233 (243)
262 PRK13652 cbiO cobalt transport 100.0 3.1E-41 6.6E-46 381.4 24.1 214 1017-1243 3-227 (277)
263 PRK13632 cbiO cobalt transport 100.0 3.2E-41 6.9E-46 380.3 24.1 215 1017-1243 7-231 (271)
264 PRK14245 phosphate ABC transpo 100.0 2.3E-41 5E-46 377.8 22.7 223 1017-1249 3-240 (250)
265 PRK15079 oligopeptide ABC tran 100.0 3.6E-41 7.8E-46 387.1 24.9 229 381-615 8-259 (331)
266 PRK14248 phosphate ABC transpo 100.0 3.8E-41 8.3E-46 379.6 24.7 220 1017-1246 21-255 (268)
267 cd03226 ABC_cobalt_CbiO_domain 100.0 1.3E-41 2.9E-46 368.0 20.1 199 1019-1233 1-205 (205)
268 cd03218 ABC_YhbG The ABC trans 100.0 2.1E-41 4.5E-46 374.3 22.0 216 1018-1243 1-222 (232)
269 cd03264 ABC_drug_resistance_li 100.0 2.3E-41 5E-46 368.1 22.0 203 1018-1236 1-211 (211)
270 PRK14235 phosphate transporter 100.0 3.7E-41 8E-46 379.0 24.3 220 379-608 17-252 (267)
271 PRK14262 phosphate ABC transpo 100.0 2.7E-41 6E-46 377.4 23.1 227 1017-1253 3-244 (250)
272 TIGR03415 ABC_choXWV_ATP choli 100.0 2.1E-41 4.5E-46 392.1 22.8 209 1034-1253 38-264 (382)
273 PRK11264 putative amino-acid A 100.0 7.2E-41 1.6E-45 374.2 26.5 220 1017-1246 3-236 (250)
274 PRK09536 btuD corrinoid ABC tr 100.0 3.9E-41 8.5E-46 393.0 25.3 214 381-608 3-229 (402)
275 PRK14239 phosphate transporter 100.0 3.4E-41 7.3E-46 377.3 23.8 220 1017-1246 5-239 (252)
276 PRK14256 phosphate ABC transpo 100.0 4.9E-41 1.1E-45 375.6 24.8 225 1015-1249 2-242 (252)
277 PRK13640 cbiO cobalt transport 100.0 4.5E-41 9.8E-46 380.7 24.8 216 1016-1243 4-232 (282)
278 PRK11000 maltose/maltodextrin 100.0 2.3E-41 5.1E-46 395.0 23.1 218 381-610 3-226 (369)
279 cd03265 ABC_DrrA DrrA is the A 100.0 3E-41 6.4E-46 369.6 22.5 209 1018-1241 1-219 (220)
280 PRK10575 iron-hydroxamate tran 100.0 3.2E-41 7E-46 379.3 23.2 221 1017-1253 11-245 (265)
281 PRK13635 cbiO cobalt transport 100.0 5E-41 1.1E-45 379.5 24.8 216 381-608 5-230 (279)
282 COG1118 CysA ABC-type sulfate/ 100.0 1.2E-41 2.7E-46 361.4 18.5 217 1017-1249 2-233 (345)
283 PRK11607 potG putrescine trans 100.0 3.7E-41 8E-46 392.3 24.4 222 380-613 18-245 (377)
284 PRK10619 histidine/lysine/argi 100.0 4.6E-41 9.9E-46 376.8 24.3 219 1015-1246 3-244 (257)
285 PRK14247 phosphate ABC transpo 100.0 6.2E-41 1.3E-45 374.5 25.1 220 381-610 3-237 (250)
286 cd03259 ABC_Carb_Solutes_like 100.0 2E-41 4.3E-46 369.1 20.5 207 382-600 1-213 (213)
287 cd03268 ABC_BcrA_bacitracin_re 100.0 3.3E-41 7.3E-46 366.0 22.0 203 1018-1236 1-208 (208)
288 PRK13537 nodulation ABC transp 100.0 5.9E-41 1.3E-45 382.8 25.0 214 1016-1244 6-228 (306)
289 PRK11308 dppF dipeptide transp 100.0 5.8E-41 1.3E-45 385.2 25.1 227 1017-1253 5-254 (327)
290 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.1E-41 4.6E-46 370.5 20.5 204 1018-1232 1-218 (218)
291 PRK13644 cbiO cobalt transport 100.0 5.5E-41 1.2E-45 378.4 24.3 213 1018-1243 2-224 (274)
292 cd03263 ABC_subfamily_A The AB 100.0 2.7E-41 5.9E-46 370.2 21.2 215 382-605 1-219 (220)
293 COG4175 ProV ABC-type proline/ 100.0 1.6E-41 3.4E-46 360.1 18.5 223 381-614 4-261 (386)
294 PRK14259 phosphate ABC transpo 100.0 9.5E-41 2.1E-45 375.7 26.1 220 380-609 12-255 (269)
295 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.5E-41 5.4E-46 380.5 21.3 218 383-614 26-257 (269)
296 cd03250 ABCC_MRP_domain1 Domai 100.0 6.5E-41 1.4E-45 362.3 23.7 200 382-595 1-204 (204)
297 PRK14260 phosphate ABC transpo 100.0 4.9E-41 1.1E-45 376.7 23.6 223 1016-1248 6-248 (259)
298 TIGR03411 urea_trans_UrtD urea 100.0 4.6E-41 9.9E-46 373.9 23.1 222 1017-1243 2-231 (242)
299 PRK14267 phosphate ABC transpo 100.0 5.2E-41 1.1E-45 375.8 23.5 218 381-608 4-238 (253)
300 PRK14249 phosphate ABC transpo 100.0 7.9E-41 1.7E-45 373.7 24.8 218 1017-1244 4-236 (251)
301 PRK11607 potG putrescine trans 100.0 6.1E-41 1.3E-45 390.5 24.8 219 1016-1250 18-246 (377)
302 PRK14268 phosphate ABC transpo 100.0 5.2E-41 1.1E-45 376.3 23.3 222 381-612 12-247 (258)
303 cd03218 ABC_YhbG The ABC trans 100.0 3.7E-41 7.9E-46 372.3 21.7 216 382-607 1-222 (232)
304 cd03247 ABCC_cytochrome_bd The 100.0 3.7E-41 8E-46 355.7 20.7 178 1018-1236 1-178 (178)
305 TIGR02769 nickel_nikE nickel i 100.0 6.2E-41 1.4E-45 377.0 23.9 226 1018-1253 3-250 (265)
306 PRK14271 phosphate ABC transpo 100.0 1.3E-40 2.7E-45 375.5 26.4 223 1017-1249 21-257 (276)
307 PRK11629 lolD lipoprotein tran 100.0 6.5E-41 1.4E-45 370.1 23.5 214 381-601 5-228 (233)
308 PRK09473 oppD oligopeptide tra 100.0 3.5E-41 7.6E-46 387.5 22.2 232 381-616 12-260 (330)
309 PRK14243 phosphate transporter 100.0 9.7E-41 2.1E-45 374.9 25.2 221 1017-1247 10-252 (264)
310 PRK13636 cbiO cobalt transport 100.0 5.8E-41 1.3E-45 380.0 23.7 219 381-608 5-232 (283)
311 PRK13537 nodulation ABC transp 100.0 3.7E-41 8E-46 384.5 22.1 218 380-608 6-228 (306)
312 TIGR02769 nickel_nikE nickel i 100.0 5.6E-41 1.2E-45 377.3 23.2 228 382-616 3-249 (265)
313 PRK09493 glnQ glutamine ABC tr 100.0 1E-40 2.2E-45 370.4 25.0 217 1018-1244 2-226 (240)
314 PRK14238 phosphate transporter 100.0 1.1E-40 2.4E-45 375.7 25.5 223 1017-1249 24-261 (271)
315 cd03266 ABC_NatA_sodium_export 100.0 4.3E-41 9.4E-46 368.0 21.7 211 382-600 2-218 (218)
316 PRK13648 cbiO cobalt transport 100.0 8.8E-41 1.9E-45 376.6 24.8 215 1017-1243 7-231 (269)
317 PRK11231 fecE iron-dicitrate t 100.0 6E-41 1.3E-45 375.4 23.2 221 1018-1254 3-236 (255)
318 PRK09473 oppD oligopeptide tra 100.0 9.8E-41 2.1E-45 383.8 25.6 229 1017-1253 12-261 (330)
319 PRK11614 livF leucine/isoleuci 100.0 7.4E-41 1.6E-45 370.8 23.7 218 1017-1243 5-226 (237)
320 cd03293 ABC_NrtD_SsuB_transpor 100.0 3E-41 6.6E-46 369.5 20.3 206 1018-1239 1-219 (220)
321 PRK14261 phosphate ABC transpo 100.0 8.4E-41 1.8E-45 374.0 24.3 227 1017-1253 6-247 (253)
322 PRK13649 cbiO cobalt transport 100.0 1.1E-40 2.3E-45 378.4 25.5 219 1018-1243 3-234 (280)
323 PRK11022 dppD dipeptide transp 100.0 6.5E-41 1.4E-45 385.1 23.9 229 1017-1253 3-253 (326)
324 cd03301 ABC_MalK_N The N-termi 100.0 3.9E-41 8.5E-46 367.0 21.0 203 1018-1236 1-213 (213)
325 cd03291 ABCC_CFTR1 The CFTR su 100.0 3.2E-40 7E-45 370.7 28.9 218 377-614 35-253 (282)
326 TIGR03410 urea_trans_UrtE urea 100.0 3.4E-41 7.4E-46 371.9 20.7 212 1018-1242 1-220 (230)
327 PRK13642 cbiO cobalt transport 100.0 1E-40 2.2E-45 377.2 25.0 217 381-608 4-230 (277)
328 TIGR02211 LolD_lipo_ex lipopro 100.0 5.8E-41 1.3E-45 367.9 22.3 205 1018-1233 2-220 (221)
329 PRK14266 phosphate ABC transpo 100.0 1.1E-40 2.4E-45 372.5 24.8 224 1017-1250 3-241 (250)
330 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.2E-41 6.9E-46 369.1 19.8 208 382-596 1-218 (218)
331 PRK14274 phosphate ABC transpo 100.0 9.2E-41 2E-45 374.8 23.9 220 381-610 12-246 (259)
332 PRK13645 cbiO cobalt transport 100.0 1.1E-40 2.4E-45 379.6 24.7 222 1015-1243 4-240 (289)
333 PRK14270 phosphate ABC transpo 100.0 1.2E-40 2.5E-45 372.4 24.4 219 1017-1245 4-237 (251)
334 PRK13641 cbiO cobalt transport 100.0 1E-40 2.2E-45 378.8 24.3 216 1017-1243 2-234 (287)
335 cd03300 ABC_PotA_N PotA is an 100.0 6E-41 1.3E-45 369.9 21.7 211 1018-1244 1-221 (232)
336 PRK11124 artP arginine transpo 100.0 9.8E-41 2.1E-45 371.1 23.5 216 1018-1243 3-230 (242)
337 PRK11247 ssuB aliphatic sulfon 100.0 1E-40 2.2E-45 371.2 23.6 204 1017-1239 12-219 (257)
338 cd03264 ABC_drug_resistance_li 100.0 7.6E-41 1.6E-45 364.0 22.1 203 382-600 1-211 (211)
339 cd03226 ABC_cobalt_CbiO_domain 100.0 4.5E-41 9.7E-46 363.9 20.1 199 383-597 1-205 (205)
340 PRK10070 glycine betaine trans 100.0 6.9E-41 1.5E-45 390.7 23.2 209 398-613 42-260 (400)
341 PRK11831 putative ABC transpor 100.0 9.2E-41 2E-45 376.2 23.2 227 381-617 7-243 (269)
342 TIGR02673 FtsE cell division A 100.0 5.3E-41 1.1E-45 366.3 20.6 201 1018-1231 2-214 (214)
343 PRK14248 phosphate ABC transpo 100.0 1.6E-40 3.4E-45 374.6 25.0 219 381-609 21-254 (268)
344 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.9E-41 1.7E-45 370.1 22.2 216 382-608 2-222 (236)
345 PRK11264 putative amino-acid A 100.0 1.9E-40 4.2E-45 370.8 25.5 219 381-609 3-235 (250)
346 PRK14254 phosphate ABC transpo 100.0 1.7E-40 3.7E-45 376.0 25.3 221 1016-1246 38-272 (285)
347 PRK14240 phosphate transporter 100.0 1.1E-40 2.5E-45 372.4 23.6 220 380-609 2-236 (250)
348 TIGR03415 ABC_choXWV_ATP choli 100.0 7E-41 1.5E-45 387.7 22.5 211 397-614 37-261 (382)
349 PRK14252 phosphate ABC transpo 100.0 1.5E-40 3.4E-45 374.0 24.7 227 1013-1249 12-255 (265)
350 TIGR03005 ectoine_ehuA ectoine 100.0 1.1E-40 2.3E-45 372.9 23.1 219 382-610 1-239 (252)
351 TIGR02211 LolD_lipo_ex lipopro 100.0 8.6E-41 1.9E-45 366.5 22.0 209 382-597 2-220 (221)
352 PRK10895 lipopolysaccharide AB 100.0 1.1E-40 2.3E-45 370.6 22.8 217 1017-1243 3-226 (241)
353 TIGR03410 urea_trans_UrtE urea 100.0 6E-41 1.3E-45 370.0 20.7 212 382-605 1-219 (230)
354 TIGR00968 3a0106s01 sulfate AB 100.0 1.8E-40 3.8E-45 367.1 24.5 211 1018-1244 1-221 (237)
355 cd03247 ABCC_cytochrome_bd The 100.0 1E-40 2.2E-45 352.3 21.5 178 382-600 1-178 (178)
356 cd03265 ABC_DrrA DrrA is the A 100.0 1.1E-40 2.4E-45 365.1 22.5 209 382-605 1-219 (220)
357 PRK13548 hmuV hemin importer A 100.0 1.9E-40 4.1E-45 371.2 24.9 213 1017-1243 2-230 (258)
358 PRK11308 dppF dipeptide transp 100.0 1.1E-40 2.4E-45 382.9 23.5 229 381-616 5-253 (327)
359 PRK11022 dppD dipeptide transp 100.0 9.2E-41 2E-45 383.9 22.8 227 382-616 4-252 (326)
360 cd03290 ABCC_SUR1_N The SUR do 100.0 1.8E-40 4E-45 362.8 24.1 210 1019-1231 2-218 (218)
361 PRK14238 phosphate transporter 100.0 1.7E-40 3.7E-45 374.1 24.6 220 381-610 24-258 (271)
362 PRK14263 phosphate ABC transpo 100.0 1.9E-40 4E-45 371.4 24.7 225 1017-1251 8-253 (261)
363 cd03268 ABC_BcrA_bacitracin_re 100.0 9.1E-41 2E-45 362.6 21.4 203 382-600 1-208 (208)
364 PRK14253 phosphate ABC transpo 100.0 1.9E-40 4.1E-45 370.4 24.6 222 1017-1248 3-238 (249)
365 PRK09493 glnQ glutamine ABC tr 100.0 1.1E-40 2.4E-45 370.1 22.6 217 382-608 2-226 (240)
366 PRK14249 phosphate ABC transpo 100.0 1.9E-40 4.1E-45 370.7 24.5 222 381-608 4-236 (251)
367 COG0410 LivF ABC-type branched 100.0 1.5E-40 3.2E-45 342.9 21.7 220 381-608 3-227 (237)
368 PRK13638 cbiO cobalt transport 100.0 1.4E-40 3E-45 375.4 23.6 212 1018-1243 2-225 (271)
369 PRK14245 phosphate ABC transpo 100.0 1.5E-40 3.3E-45 371.1 23.6 219 381-609 3-236 (250)
370 PRK14236 phosphate transporter 100.0 1.8E-40 4E-45 374.4 24.5 220 379-608 23-257 (272)
371 cd03292 ABC_FtsE_transporter F 100.0 8.6E-41 1.9E-45 364.7 21.1 202 1018-1232 1-214 (214)
372 PRK14258 phosphate ABC transpo 100.0 1.6E-40 3.5E-45 372.7 23.7 222 1016-1247 6-249 (261)
373 cd03225 ABC_cobalt_CbiO_domain 100.0 7.3E-41 1.6E-45 364.3 20.2 201 1019-1231 1-211 (211)
374 PRK14261 phosphate ABC transpo 100.0 1.7E-40 3.6E-45 371.6 23.6 219 381-609 6-239 (253)
375 PRK14272 phosphate ABC transpo 100.0 1.6E-40 3.5E-45 371.8 23.5 225 1017-1251 4-244 (252)
376 PRK14237 phosphate transporter 100.0 2.3E-40 4.9E-45 372.6 24.7 219 380-608 19-252 (267)
377 PRK10253 iron-enterobactin tra 100.0 2E-40 4.4E-45 372.8 24.2 214 1016-1243 6-233 (265)
378 PRK11614 livF leucine/isoleuci 100.0 1.8E-40 3.9E-45 367.7 23.5 219 381-608 5-227 (237)
379 PRK14241 phosphate transporter 100.0 1.6E-40 3.5E-45 372.5 23.4 219 1017-1245 4-244 (258)
380 PRK13644 cbiO cobalt transport 100.0 1.6E-40 3.6E-45 374.6 23.5 218 382-608 2-225 (274)
381 PRK14243 phosphate transporter 100.0 2.6E-40 5.6E-45 371.4 25.0 220 381-610 10-251 (264)
382 PRK14275 phosphate ABC transpo 100.0 1.7E-40 3.7E-45 376.5 23.7 226 1016-1251 38-278 (286)
383 PRK14251 phosphate ABC transpo 100.0 1.9E-40 4E-45 370.9 23.7 223 381-613 4-241 (251)
384 cd03235 ABC_Metallic_Cations A 100.0 7E-41 1.5E-45 364.9 19.7 198 1019-1236 1-213 (213)
385 PRK13645 cbiO cobalt transport 100.0 1.4E-40 3E-45 378.8 23.0 224 379-608 4-241 (289)
386 PRK13632 cbiO cobalt transport 100.0 1.8E-40 4E-45 374.1 23.6 220 381-608 7-232 (271)
387 TIGR03411 urea_trans_UrtD urea 100.0 1.9E-40 4.1E-45 369.0 23.4 221 382-607 3-231 (242)
388 PRK10575 iron-hydroxamate tran 100.0 1.6E-40 3.4E-45 373.7 22.9 213 381-607 11-237 (265)
389 TIGR01288 nodI ATP-binding ABC 100.0 1.5E-40 3.2E-45 380.6 23.0 213 1017-1244 4-225 (303)
390 PRK13641 cbiO cobalt transport 100.0 1.7E-40 3.6E-45 377.1 23.3 221 381-608 2-235 (287)
391 PRK10895 lipopolysaccharide AB 100.0 1.7E-40 3.7E-45 368.9 22.9 218 381-608 3-227 (241)
392 PRK14239 phosphate transporter 100.0 1.6E-40 3.5E-45 371.9 22.8 219 381-609 5-238 (252)
393 PRK13639 cbiO cobalt transport 100.0 1.3E-40 2.8E-45 376.0 22.2 213 1018-1243 2-226 (275)
394 PRK14256 phosphate ABC transpo 100.0 2.4E-40 5.3E-45 370.0 24.0 223 380-612 3-241 (252)
395 cd03257 ABC_NikE_OppD_transpor 100.0 1.7E-40 3.7E-45 366.3 22.4 212 1018-1236 2-228 (228)
396 PRK11247 ssuB aliphatic sulfon 100.0 2.4E-40 5.3E-45 368.2 23.8 205 380-603 11-219 (257)
397 PRK11300 livG leucine/isoleuci 100.0 2.1E-40 4.6E-45 371.5 23.5 220 1017-1243 5-243 (255)
398 PRK14244 phosphate ABC transpo 100.0 1.4E-40 3E-45 371.7 21.8 219 382-610 6-240 (251)
399 PRK13649 cbiO cobalt transport 100.0 1.9E-40 4.1E-45 376.5 23.2 220 382-608 3-235 (280)
400 TIGR01288 nodI ATP-binding ABC 100.0 1.2E-40 2.7E-45 381.2 21.9 217 381-608 4-225 (303)
401 PRK13633 cobalt transporter AT 100.0 2.2E-40 4.7E-45 375.1 23.6 217 381-608 4-234 (280)
402 TIGR03522 GldA_ABC_ATP gliding 100.0 2.1E-40 4.5E-45 378.6 23.6 212 1018-1244 3-222 (301)
403 TIGR03873 F420-0_ABC_ATP propo 100.0 2.2E-40 4.7E-45 371.1 23.2 212 1018-1243 2-226 (256)
404 PRK10771 thiQ thiamine transpo 100.0 3.4E-40 7.4E-45 364.1 24.3 208 1018-1243 2-219 (232)
405 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.5E-40 5.3E-45 360.0 22.8 201 1018-1236 1-211 (211)
406 PRK14246 phosphate ABC transpo 100.0 3E-40 6.5E-45 368.9 24.0 228 1016-1253 9-251 (257)
407 PRK15112 antimicrobial peptide 100.0 3.5E-40 7.5E-45 371.1 24.6 229 1017-1256 4-253 (267)
408 PRK13652 cbiO cobalt transport 100.0 2.6E-40 5.5E-45 373.9 23.6 215 381-608 3-228 (277)
409 PRK13640 cbiO cobalt transport 100.0 3.6E-40 7.8E-45 373.4 24.9 216 381-608 5-233 (282)
410 PRK13648 cbiO cobalt transport 100.0 3.1E-40 6.8E-45 372.1 24.3 220 381-608 7-232 (269)
411 COG4555 NatA ABC-type Na+ tran 100.0 4.3E-41 9.4E-46 335.3 15.1 219 382-608 2-223 (245)
412 PRK11701 phnK phosphonate C-P 100.0 8E-40 1.7E-44 367.0 27.3 227 1017-1253 6-251 (258)
413 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.4E-40 2.9E-45 364.3 20.5 209 382-602 1-218 (220)
414 PRK10584 putative ABC transpor 100.0 3E-40 6.6E-45 363.8 23.4 208 1017-1235 6-227 (228)
415 PRK11231 fecE iron-dicitrate t 100.0 2.5E-40 5.4E-45 370.4 23.1 212 382-607 3-227 (255)
416 PRK14271 phosphate ABC transpo 100.0 3.2E-40 7E-45 372.3 24.1 223 381-609 21-253 (276)
417 PRK11124 artP arginine transpo 100.0 3.1E-40 6.8E-45 367.0 23.7 216 382-607 3-230 (242)
418 cd03246 ABCC_Protease_Secretio 100.0 1.9E-40 4.2E-45 348.3 20.7 172 1018-1232 1-173 (173)
419 PRK14265 phosphate ABC transpo 100.0 5E-40 1.1E-44 370.6 25.6 221 1016-1246 19-261 (274)
420 cd03299 ABC_ModC_like Archeal 100.0 3.6E-40 7.7E-45 364.2 23.9 211 1018-1245 1-221 (235)
421 PRK10908 cell division protein 100.0 2.7E-40 5.8E-45 362.5 22.7 204 1018-1234 2-217 (222)
422 PRK10247 putative ABC transpor 100.0 2.6E-40 5.6E-45 362.8 22.5 211 381-603 7-223 (225)
423 PRK10619 histidine/lysine/argi 100.0 3.4E-40 7.3E-45 369.8 23.9 219 380-608 4-242 (257)
424 PRK14253 phosphate ABC transpo 100.0 3.5E-40 7.6E-45 368.2 23.9 218 381-608 3-234 (249)
425 PRK13536 nodulation factor exp 100.0 1.9E-40 4.2E-45 382.0 22.4 217 381-608 41-262 (340)
426 cd03301 ABC_MalK_N The N-termi 100.0 1.8E-40 4E-45 361.7 20.8 207 382-600 1-213 (213)
427 PRK14270 phosphate ABC transpo 100.0 4.1E-40 9E-45 367.9 24.1 218 381-608 4-236 (251)
428 PRK10247 putative ABC transpor 100.0 2.6E-40 5.6E-45 362.8 22.0 210 1017-1239 7-223 (225)
429 PRK14255 phosphate ABC transpo 100.0 3.6E-40 7.9E-45 368.8 23.5 223 1017-1249 5-242 (252)
430 PRK13536 nodulation factor exp 100.0 4.7E-40 1E-44 378.8 25.0 213 1017-1244 41-262 (340)
431 PRK15093 antimicrobial peptide 100.0 4E-40 8.6E-45 380.1 24.5 229 1017-1253 3-258 (330)
432 cd03246 ABCC_Protease_Secretio 100.0 3.3E-40 7.2E-45 346.5 21.6 172 382-596 1-173 (173)
433 PRK14262 phosphate ABC transpo 100.0 3.7E-40 8E-45 368.3 23.3 219 381-609 3-236 (250)
434 TIGR02673 FtsE cell division A 100.0 2.3E-40 5.1E-45 361.2 21.1 201 382-595 2-214 (214)
435 cd03257 ABC_NikE_OppD_transpor 100.0 2.3E-40 4.9E-45 365.2 21.2 213 382-600 2-228 (228)
436 cd03290 ABCC_SUR1_N The SUR do 100.0 5.5E-40 1.2E-44 359.0 23.8 210 383-595 2-218 (218)
437 PRK13548 hmuV hemin importer A 100.0 5.9E-40 1.3E-44 367.3 24.6 212 382-607 3-230 (258)
438 PRK11300 livG leucine/isoleuci 100.0 4.2E-40 9E-45 369.2 23.4 223 381-608 5-244 (255)
439 PRK13638 cbiO cobalt transport 100.0 3.6E-40 7.8E-45 372.0 23.0 217 382-608 2-226 (271)
440 cd03269 ABC_putative_ATPase Th 100.0 2.6E-40 5.5E-45 359.6 20.8 201 1018-1236 1-210 (210)
441 PRK14272 phosphate ABC transpo 100.0 4.4E-40 9.5E-45 368.3 23.2 227 381-613 4-242 (252)
442 PRK11144 modC molybdate transp 100.0 4.4E-40 9.5E-45 382.8 24.0 212 1018-1246 2-221 (352)
443 cd03225 ABC_cobalt_CbiO_domain 100.0 2.3E-40 5E-45 360.4 20.3 205 383-595 1-211 (211)
444 TIGR03522 GldA_ABC_ATP gliding 100.0 3.9E-40 8.4E-45 376.4 23.0 215 382-607 3-221 (301)
445 PRK14275 phosphate ABC transpo 100.0 5.1E-40 1.1E-44 372.6 23.6 221 380-610 38-273 (286)
446 PRK14264 phosphate ABC transpo 100.0 5.8E-40 1.3E-44 375.3 24.2 220 1016-1245 44-291 (305)
447 PRK14260 phosphate ABC transpo 100.0 4.6E-40 1E-44 368.9 22.9 220 380-609 6-245 (259)
448 PRK09984 phosphonate/organopho 100.0 9.4E-40 2E-44 367.3 25.2 227 1017-1260 4-256 (262)
449 cd03262 ABC_HisP_GlnQ_permease 100.0 2.8E-40 6.2E-45 360.3 20.2 201 1018-1232 1-213 (213)
450 cd03292 ABC_FtsE_transporter F 100.0 3.6E-40 7.8E-45 359.8 21.0 206 382-596 1-214 (214)
451 PRK00349 uvrA excinuclease ABC 100.0 4E-39 8.6E-44 406.9 33.3 104 1145-1248 818-932 (943)
452 PRK14254 phosphate ABC transpo 100.0 9.3E-40 2E-44 369.9 24.9 219 380-608 38-270 (285)
453 PRK10253 iron-enterobactin tra 100.0 5.9E-40 1.3E-44 369.0 23.1 214 380-607 6-233 (265)
454 PRK15093 antimicrobial peptide 100.0 5.4E-40 1.2E-44 379.0 23.2 229 381-615 3-256 (330)
455 PRK13547 hmuV hemin importer A 100.0 8.3E-40 1.8E-44 367.0 24.0 212 1018-1243 2-244 (272)
456 COG1123 ATPase components of v 100.0 3.9E-40 8.5E-45 383.8 22.1 234 380-617 279-529 (539)
457 PRK10418 nikD nickel transport 100.0 1.1E-39 2.3E-44 364.8 24.8 228 1017-1258 4-246 (254)
458 COG0410 LivF ABC-type branched 100.0 6.8E-40 1.5E-44 338.0 21.2 220 1017-1244 3-227 (237)
459 PRK13639 cbiO cobalt transport 100.0 6.1E-40 1.3E-44 370.4 22.9 218 382-608 2-227 (275)
460 cd03235 ABC_Metallic_Cations A 100.0 2.7E-40 5.9E-45 360.2 19.3 198 383-600 1-213 (213)
461 PRK14252 phosphate ABC transpo 100.0 1E-39 2.2E-44 367.4 24.4 220 379-608 14-250 (265)
462 TIGR01277 thiQ thiamine ABC tr 100.0 9.1E-40 2E-44 355.8 23.3 202 1018-1237 1-212 (213)
463 PRK11144 modC molybdate transp 100.0 7.8E-40 1.7E-44 380.7 23.8 212 382-610 2-221 (352)
464 cd03234 ABCG_White The White s 100.0 4.2E-40 9.1E-45 361.8 20.4 210 1018-1236 4-226 (226)
465 cd03269 ABC_putative_ATPase Th 100.0 3.5E-40 7.6E-45 358.5 19.4 205 382-600 1-210 (210)
466 PRK11701 phnK phosphonate C-P 100.0 8.6E-40 1.9E-44 366.7 23.2 225 381-614 6-248 (258)
467 TIGR01978 sufC FeS assembly AT 100.0 6.4E-40 1.4E-44 365.2 21.9 214 1018-1243 1-234 (243)
468 COG4555 NatA ABC-type Na+ tran 100.0 3.1E-40 6.8E-45 329.2 17.1 213 1018-1244 2-223 (245)
469 TIGR03873 F420-0_ABC_ATP propo 100.0 9.1E-40 2E-44 366.0 23.1 221 382-607 2-226 (256)
470 PRK14241 phosphate transporter 100.0 8E-40 1.7E-44 367.0 22.6 218 381-608 4-243 (258)
471 cd03262 ABC_HisP_GlnQ_permease 100.0 8E-40 1.7E-44 356.8 21.9 205 382-596 1-213 (213)
472 PRK10584 putative ABC transpor 100.0 1.2E-39 2.6E-44 359.1 23.3 212 381-599 6-227 (228)
473 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.2E-39 2.6E-44 354.6 22.9 201 382-600 1-211 (211)
474 PRK10908 cell division protein 100.0 1.1E-39 2.4E-44 357.7 22.8 208 382-598 2-217 (222)
475 TIGR01188 drrA daunorubicin re 100.0 6E-40 1.3E-44 375.3 21.4 200 1033-1244 6-214 (302)
476 PRK14265 phosphate ABC transpo 100.0 2.5E-39 5.5E-44 364.9 26.1 220 380-609 19-260 (274)
477 PRK14263 phosphate ABC transpo 100.0 1.3E-39 2.9E-44 364.5 23.7 219 381-609 8-247 (261)
478 PRK14258 phosphate ABC transpo 100.0 1.1E-39 2.5E-44 365.9 23.2 221 380-610 6-248 (261)
479 COG1131 CcmA ABC-type multidru 100.0 7.2E-40 1.6E-44 369.9 21.6 213 381-607 4-226 (293)
480 PRK10419 nikE nickel transport 100.0 1.4E-39 3.1E-44 366.0 23.8 230 1017-1254 3-251 (268)
481 PRK13547 hmuV hemin importer A 100.0 1.7E-39 3.8E-44 364.4 24.0 221 382-607 2-244 (272)
482 PRK14266 phosphate ABC transpo 100.0 1.9E-39 4E-44 362.6 24.1 220 382-611 4-238 (250)
483 cd03300 ABC_PotA_N PotA is an 100.0 9.1E-40 2E-44 360.5 21.2 211 382-608 1-221 (232)
484 TIGR00968 3a0106s01 sulfate AB 100.0 2.1E-39 4.6E-44 358.5 24.2 215 382-608 1-221 (237)
485 COG1131 CcmA ABC-type multidru 100.0 8.4E-40 1.8E-44 369.4 21.2 214 1017-1244 4-227 (293)
486 COG0411 LivG ABC-type branched 100.0 3.6E-40 7.9E-45 342.7 16.6 220 382-609 5-241 (250)
487 COG4175 ProV ABC-type proline/ 100.0 5.8E-40 1.2E-44 348.2 18.3 225 1017-1252 4-263 (386)
488 PRK14264 phosphate ABC transpo 100.0 2.1E-39 4.6E-44 370.6 24.5 219 380-608 44-290 (305)
489 PRK14255 phosphate ABC transpo 100.0 1.9E-39 4E-44 363.1 23.4 219 381-609 5-238 (252)
490 PRK15112 antimicrobial peptide 100.0 2.4E-39 5.2E-44 364.2 23.8 227 381-617 4-250 (267)
491 PRK10771 thiQ thiamine transpo 100.0 2.9E-39 6.3E-44 356.6 23.9 209 382-608 2-220 (232)
492 cd03234 ABCG_White The White s 100.0 1.1E-39 2.5E-44 358.4 20.5 214 382-600 4-226 (226)
493 TIGR02142 modC_ABC molybdenum 100.0 1.8E-39 3.9E-44 378.3 23.3 212 1022-1249 4-227 (354)
494 PRK11248 tauB taurine transpor 100.0 1.6E-39 3.5E-44 362.5 21.9 202 1018-1238 2-215 (255)
495 PRK14246 phosphate ABC transpo 100.0 2.6E-39 5.7E-44 361.2 23.5 226 380-615 9-249 (257)
496 PRK09984 phosphonate/organopho 100.0 3E-39 6.5E-44 363.2 24.1 220 381-605 4-240 (262)
497 TIGR01188 drrA daunorubicin re 100.0 9.2E-40 2E-44 373.8 20.3 203 397-607 6-213 (302)
498 TIGR01978 sufC FeS assembly AT 100.0 1.8E-39 3.9E-44 361.6 21.7 215 382-606 1-233 (243)
499 PRK10419 nikE nickel transport 100.0 3.3E-39 7.2E-44 363.0 23.6 227 381-614 3-248 (268)
500 COG0444 DppD ABC-type dipeptid 100.0 2.2E-39 4.7E-44 352.3 20.9 231 382-617 2-253 (316)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.6e-219 Score=1993.75 Aligned_cols=1209 Identities=53% Similarity=0.860 Sum_probs=1113.1
Q ss_pred hHhHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 000830 40 SVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSW 119 (1265)
Q Consensus 40 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (1265)
..++.++|+|..+.++.+++++.+++++.++..|++.++++.+++.+..... . ...+....+++.+++++++.++..|
T Consensus 12 ~~~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~-~-~~~~~~~~~~l~~~~lg~~~~~~~~ 89 (1228)
T KOG0055|consen 12 TVSFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTN-K-IASSEVSKVALYFVYLGVGVFISGF 89 (1228)
T ss_pred ccchHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccc-h-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999999999999999999999999999999999999999998865331 1 2224567788889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 120 IEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFA 199 (1265)
Q Consensus 120 ~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 199 (1265)
++..||.+.++|...++|.++++.+++++++|||.+ .+|++.+++++|++.|++++++.+..+++.+.+++.++++.|+
T Consensus 90 ~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~ 168 (1228)
T KOG0055|consen 90 IQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFY 168 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999984 7799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Q 000830 200 RVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGR 279 (1265)
Q Consensus 200 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 279 (1265)
..|+|+++++.+.|++++...++.+.+.+...+.+++++++.++++|+++++|||.+|+.|+.+.++|.+..+...+...
T Consensus 169 ~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi 248 (1228)
T KOG0055|consen 169 YGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGI 248 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Q 000830 280 KAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMI 359 (1265)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l 359 (1265)
+...+.++..++..++.+..+++.+|||+.++..+..++|.+++.++++++....+++..+.+..+..+++|+.+|++.+
T Consensus 249 ~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i 328 (1228)
T KOG0055|consen 249 KKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETI 328 (1228)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999888899989999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcc
Q 000830 360 ERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSG 439 (1265)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 439 (1265)
+..|+++.....+.......|.|+|+||+|+||.+++.++|+|+||+|++|+++||||||||||||++++|.|||+|++|
T Consensus 329 ~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G 408 (1228)
T KOG0055|consen 329 DRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSG 408 (1228)
T ss_pred cCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCc
Confidence 99888766443333455678999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCC
Q 000830 440 EILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGI 519 (1265)
Q Consensus 440 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 519 (1265)
+|++||.|+++++.+|+|++||.|+|+|.||++||+|||+||+|+++.+++.+|||++++++||..||+||||.+||+|.
T Consensus 409 ~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~ 488 (1228)
T KOG0055|consen 409 EVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGV 488 (1228)
T ss_pred eEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEe
Q 000830 520 QLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKT 599 (1265)
Q Consensus 520 ~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~ 599 (1265)
+|||||||||||||||++||+||||||||||||+++|+.++++|++.++|||+|+|||||+++++||+|+||++|+|+|.
T Consensus 489 qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~ 568 (1228)
T KOG0055|consen 489 QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQ 568 (1228)
T ss_pred CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCcchhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCccc-ccCcccchhhhcccCCCCCCC--c
Q 000830 600 GSHEELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSF-GASFRSEKESVLSHGAADATE--P 676 (1265)
Q Consensus 600 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~ 676 (1265)
|+|+||++.+ |.|.+|++.|+...+.+..+..++.. .....+...+....+. +......... .....++.++ .
T Consensus 569 G~h~ELi~~~-G~Y~~lv~~Q~~~~~~~~~~~~~~~~--~~~~~s~~~s~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~ 644 (1228)
T KOG0055|consen 569 GTHDELIALG-GIYSSLVRLQELEKAAEDEEEEESLK--EERSRSLKSSSSSPSLSRGSNRSNLLS-VKPEGEDPEEPVS 644 (1228)
T ss_pred cCHHHHHhcc-chHHHHHHHHhhhhhhhccccccchh--hhhhhccccccccccccCCcccccccc-ccccccccccccc
Confidence 9999999984 99999999997665433211000000 0000000000000000 0000000000 0000000000 1
Q ss_pred cchhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhhhhHHHHHHHHHHHHHHHHHHH
Q 000830 677 ATAKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYM-DWDTTQREVKKITILFCCAAVITVIVH 755 (1265)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~ 755 (1265)
......++++++++.+|+|+++++|.+++++.|..+|++++.+++.+..+.. +++........|.++|++++++..+..
T Consensus 645 ~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~ 724 (1228)
T KOG0055|consen 645 EEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITN 724 (1228)
T ss_pred cccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1114567889999999999999999999999999999999999999999885 444455545559999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 756 AIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIA 835 (1265)
Q Consensus 756 ~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~ 835 (1265)
+++++++.+.++++..|+|.++|+++++++++|||.++|. |.|.+|+.+|+..++..+.+.+..+++++..++++++++
T Consensus 725 ~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiia 803 (1228)
T KOG0055|consen 725 FLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIA 803 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHH
Q 000830 836 FILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKR 915 (1265)
Q Consensus 836 ~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~ 915 (1265)
|+++|+++++++++.|++++..+.+.+++.+...+.++.+.++...+.|+++|++||++|+.|+++.+.|.+.++...+.
T Consensus 804 f~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~ 883 (1228)
T KOG0055|consen 804 FIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKS 883 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 916 SFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFE 995 (1265)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~ 995 (1265)
..+++.+.++.+++++++.++.+++++|+|.+++..+.+++..++.+++++.+.+..++++.++.|++.++..++.++++
T Consensus 884 ~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~ 963 (1228)
T KOG0055|consen 884 SFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFE 963 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccccCC--CCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC
Q 000830 996 VLDRKTQVIGD--IGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPT 1073 (1265)
Q Consensus 996 ~~~~~~~~~~~--~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~ 1073 (1265)
+++++|..+.. .+...++.+|+|+|+||+|+||+||+.+||+|+||+|++||++||||||||||||++.||.|||||+
T Consensus 964 i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~ 1043 (1228)
T KOG0055|consen 964 ILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD 1043 (1228)
T ss_pred HhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 99999866543 2333556789999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCC
Q 000830 1074 AGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGER 1153 (1265)
Q Consensus 1074 ~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~ 1153 (1265)
+|.|.|||+||+++++++||++|++|+|||.||++||||||.||.++++++|+.+||+.|++|+||.+||+||||.|||+
T Consensus 1044 ~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGer 1123 (1228)
T KOG0055|consen 1044 AGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGER 1123 (1228)
T ss_pred CCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcc
Confidence 99999999999999999999999999999999999999999999666999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEE
Q 000830 1154 GVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKII 1233 (1265)
Q Consensus 1154 G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Iv 1233 (1265)
|.+||||||||||||||++||||||||||||||||.++|+.||++|+++..+||+|+|||||+||++||.|+|+++|+|+
T Consensus 1124 G~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~Vv 1203 (1228)
T KOG0055|consen 1124 GVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVV 1203 (1228)
T ss_pred cCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecChhhhhhcCCcHHHHHHHHhh
Q 000830 1234 EQGTHSSLVENEDGAYFKLINLQQ 1257 (1265)
Q Consensus 1234 e~Gt~~eLl~~~~g~f~~l~~~~~ 1257 (1265)
|+|||+||++ ++|.|++|++.|.
T Consensus 1204 E~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1204 EQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred ecccHHHHHh-CCCchHHHhhhcc
Confidence 9999999999 8999999999875
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.2e-174 Score=1723.93 Aligned_cols=1206 Identities=30% Similarity=0.493 Sum_probs=1018.2
Q ss_pred hhHhHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 000830 39 RSVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSS 118 (1265)
Q Consensus 39 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (1265)
++.++..+|+|..+.++.+++++++++++.+++.|++|++++.++|.+... ..+..+.+.+++++++.+++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~--------~~~~~~~~~~~~~~i~~~~~~ 114 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLG--------ENVNDIIFSLVLIGIFQFILS 114 (1466)
T ss_pred ccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------chHHHHHHHHHHHHHHHHHHH
Confidence 445789999999988888889999999999999999999999999976321 112233455666677788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 119 WIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGF 198 (1265)
Q Consensus 119 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 198 (1265)
|++.+++.+.++++..++|.++|++++++|++|||+ .++|++++++++|++.+++.++..+..++..++.++++++++|
T Consensus 115 ~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~-~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~ 193 (1466)
T PTZ00265 115 FISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDN-NPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSL 193 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 5889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 000830 199 ARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYG 278 (1265)
Q Consensus 199 ~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 278 (1265)
+++|+|++++++++|+++++..++.++.++..++.++..++.++.++|+++|+++||+|+.|+.+.++|++..+...+..
T Consensus 194 ~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~ 273 (1466)
T PTZ00265 194 FKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYI 273 (1466)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------ccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 000830 279 RKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKH--------ISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKA 350 (1265)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--------~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 350 (1265)
.+...+.++..++..++.++.+++++|+|++++..| .+++|.+++++++.+.....+..+.+.+..++.+.+
T Consensus 274 ~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~ 353 (1466)
T PTZ00265 274 LKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLE 353 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888888889999999999999875 477888888777766666666777888999999999
Q ss_pred HHHHHHHHhccccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHH
Q 000830 351 AAYPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLI 430 (1265)
Q Consensus 351 a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll 430 (1265)
|++|++++++.+++.+. ...+...+. .+.|+|+||+|+|+++++.++|+|+||+|++||++|||||||||||||+++|
T Consensus 354 a~~ri~~ii~~~~~~~~-~~~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL 431 (1466)
T PTZ00265 354 ATNSLYEIINRKPLVEN-NDDGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLI 431 (1466)
T ss_pred HHHHHHHHHcCCCCCCC-CCCCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 99999999987765432 111111222 2479999999999865555799999999999999999999999999999999
Q ss_pred HhccCCCcceEEE-CCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCC--------------------------
Q 000830 431 ERFYEPLSGEILL-DGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKD-------------------------- 483 (1265)
Q Consensus 431 ~~~~~~~~G~i~~-~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~-------------------------- 483 (1265)
+|+|+|++|+|.+ ||+++++++.+++|++||||+|+|.||++||+|||.+|.+
T Consensus 432 ~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (1466)
T PTZ00265 432 ERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKR 511 (1466)
T ss_pred HHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcccccccccccccccccc
Confidence 9999999999999 5799999999999999999999999999999999999742
Q ss_pred -------------------------------CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 484 -------------------------------DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 484 -------------------------------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
..++++++++|+.+++++|+..||+||||.+|++|.+|||||||||+||
T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIA 591 (1466)
T PTZ00265 512 NSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIA 591 (1466)
T ss_pred ccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHH
Confidence 2456889999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhccCEEEEEeCC----------------
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRNADVIAVVQGR---------------- 594 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G---------------- 594 (1265)
|||+++|+|||||||||+||++++..|++.|+++. +|+|+|+||||+++++.||+|++|++|
T Consensus 592 RAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~ 671 (1466)
T PTZ00265 592 RAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPT 671 (1466)
T ss_pred HHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccc
Confidence 99999999999999999999999999999999986 489999999999999999999999986
Q ss_pred -------------------------------EEEEeeCcchhccCCchHHHHHHHHHHHhhhccCCC-CCCCCCC-CCcc
Q 000830 595 -------------------------------KIVKTGSHEELISNPNSAYAALVQLQEAASQQSNSS-QCPNMGR-PLSI 641 (1265)
Q Consensus 595 -------------------------------~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~ 641 (1265)
+|+|+|+|+||++..++.|+.|+..|.......... ....... ....
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~ 751 (1466)
T PTZ00265 672 KDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAY 751 (1466)
T ss_pred ccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccccc
Confidence 599999999999855899999998875432111000 0000000 0000
Q ss_pred cccc-cc---cCCCc--ccccCcc-cchhhhcccCCCCC-CC-c----------cchhhhHHHHHHHhhchhhHHHHHHH
Q 000830 642 KFSR-EL---SGTRT--SFGASFR-SEKESVLSHGAADA-TE-P----------ATAKHVSAIKLYSMVRPDWTYGVCGT 702 (1265)
Q Consensus 642 ~~~~-~~---~~~~~--~~~~~~~-~~~~~~~~~~~~~~-~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (1265)
.... .. ..... ....... ............+. .+ + .........++++..+++++.+.+++
T Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (1466)
T PTZ00265 752 KDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVTIIA 831 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 0000 00 00000 0000000 00000000000000 00 0 00111134455666777777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 703 ICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAIL 782 (1265)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll 782 (1265)
+++++.+...|+++++++.++..++.. .........|.+++++++++..++.+++.++..+.++++..++|..+|++++
T Consensus 832 ~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll 910 (1466)
T PTZ00265 832 LSILVAGGLYPVFALLYAKYVSTLFDF-ANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENIL 910 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999988866531 1122234567777888888889999999999999999999999999999999
Q ss_pred hCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 783 SNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATYPLIISGHISEKL 862 (1265)
Q Consensus 783 ~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~ 862 (1265)
++|++|||+..+++|++++|+++|++.++..+...+..++..++.++++++++++++|.+++++++++|++........+
T Consensus 911 ~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~ 990 (1466)
T PTZ00265 911 YQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRAR 990 (1466)
T ss_pred cCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999877899999999999999999999999999999999999999999999999988876655544333222111
Q ss_pred HHHh--hhhH-------------HHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000830 863 FFQG--YGGN-------------LSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFY 927 (1265)
Q Consensus 863 ~~~~--~~~~-------------~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (1265)
.... .... ..+........+.|++.|++|||+|+.|+++.++|.+..+...+...+...+.++++
T Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1466)
T PTZ00265 991 LTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLW 1070 (1466)
T ss_pred HHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1110 0000 122345667899999999999999999999999999999999888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC-
Q 000830 928 GISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGD- 1006 (1265)
Q Consensus 928 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~- 1006 (1265)
++.+++.++..++++|+|++++..+.++++.++.++.++.+...++..+..+++++..+..+++|++++++.+++.+..
T Consensus 1071 ~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~ 1150 (1466)
T PTZ00265 1071 GFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRD 1150 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCC
Confidence 9999999999999999999999999999999988877766666667888899999999999999999999876543211
Q ss_pred -CCcc---cCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC----------
Q 000830 1007 -IGEE---LTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP---------- 1072 (1265)
Q Consensus 1007 -~~~~---~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p---------- 1072 (1265)
.+.. .+...|.|+|+||+|+||++|+.+||+|+||+|+|||++|||||||||||||+++|+|||+|
T Consensus 1151 ~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~ 1230 (1466)
T PTZ00265 1151 NGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKN 1230 (1466)
T ss_pred CcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccc
Confidence 1111 12345789999999999977666899999999999999999999999999999999999999
Q ss_pred --------------------------------------------CCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcc
Q 000830 1073 --------------------------------------------TAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFAT 1108 (1265)
Q Consensus 1073 --------------------------------------------~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~g 1108 (1265)
++|+|+|||+|++++++++||++|+||||||+||+|
T Consensus 1231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~g 1310 (1466)
T PTZ00265 1231 EHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNM 1310 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccc
Confidence 699999999999999999999999999999999999
Q ss_pred cHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCC
Q 000830 1109 SIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALD 1188 (1265)
Q Consensus 1109 TIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD 1188 (1265)
||||||.+|.++++++|+++||+.|++++||.+||+||||.|||+|.+|||||||||||||||+|+|+||||||||||||
T Consensus 1311 TIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD 1390 (1466)
T PTZ00265 1311 SIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLD 1390 (1466)
T ss_pred cHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc--CCceEEEEecCchhhhccCEEEEEeC----CEEE-EecChhhhhhcCCcHHHHHHHHh
Q 000830 1189 VESERVVQQALQRLM--RKRTTIIVAHRLSTIKNADQISVIES----GKII-EQGTHSSLVENEDGAYFKLINLQ 1256 (1265)
Q Consensus 1189 ~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~~DrI~vl~~----G~Iv-e~Gt~~eLl~~~~g~f~~l~~~~ 1256 (1265)
++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |+++ |.|+|+||+++.+|.|++||+.|
T Consensus 1391 ~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1391 SNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 999999999999984 68999999999999999999999999 9954 89999999974589999999876
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-169 Score=1597.81 Aligned_cols=1087 Identities=22% Similarity=0.327 Sum_probs=848.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC----CchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 125 WMYTGERQAAKMRMAYLRSMLNQ----DISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFAR 200 (1265)
Q Consensus 125 ~~~~~~~~~~~lR~~~~~~l~~~----~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 200 (1265)
+.+...+++.++|..+...++++ +-..-.. .++|+++|.+++|++++.++. .+++.+|....-+++..++
T Consensus 262 ~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~-~t~G~ivNlms~D~~ri~~~~-----~~~h~~w~~Plqi~~~l~l 335 (1381)
T KOG0054|consen 262 YFFVSFRVGMRLRSALISAIYRKALRLSNSARGE-TTVGEIVNLMSVDAQRLSDAA-----CFLHLLWSAPLQIILALYL 335 (1381)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHhhhcCchhhccC-CCcchhhhhhhhhHHHHHHHH-----HHHHHHHHHHHHHHHHHHH
Confidence 44567788888887765555544 4433323 578999999999999999975 3566666666666666665
Q ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHH
Q 000830 201 VWQI----SLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYK 276 (1265)
Q Consensus 201 ~~~l----~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~ 276 (1265)
.|.+ +++.++++.+++++..+++++.++...+..+..+++.+.++|.++|||+||+|+||+.+.++.++.++++.+
T Consensus 336 Ly~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~ 415 (1381)
T KOG0054|consen 336 LYGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELK 415 (1381)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHH
Confidence 5553 556666677777788889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000830 277 YGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVV-VHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPI 355 (1265)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri 355 (1265)
..+|.....++...+..+...++.++ .++.+. ..++.+++..+|+.+..+-.+..|+..++..+..+.++.+|.+|+
T Consensus 416 ~lrk~~~~~~~~~~~~~~~p~lv~~~--tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri 493 (1381)
T KOG0054|consen 416 LLRKSAYLSALNSFLNFFSPVLVSVV--TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRL 493 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888776665555544333 344444 557788888889887766677778888899999999999999999
Q ss_pred HHHhccccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC
Q 000830 356 FEMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE 435 (1265)
Q Consensus 356 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~ 435 (1265)
.+++..++.... .....+..+.+..|+++|.+|+|++..+.+.|+||||+|++|+.+||||+.|||||+|+++|+|+++
T Consensus 494 ~~fl~~~e~~~~-~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~ 572 (1381)
T KOG0054|consen 494 KEFLLSEELDPD-SVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMP 572 (1381)
T ss_pred HHHhcCcccCcc-ccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcc
Confidence 999976433221 1111122334457999999999986445569999999999999999999999999999999999999
Q ss_pred CCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCccccccccc
Q 000830 436 PLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVG 515 (1265)
Q Consensus 436 ~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~ 515 (1265)
..+|++.++| .++||||+||+|+|||||||+||.|.. .+...++.+.|.+..+++.||.|+.|+||
T Consensus 573 ~~sG~v~v~g-------------siaYv~Q~pWI~ngTvreNILFG~~~d-~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIG 638 (1381)
T KOG0054|consen 573 KLSGSVAVNG-------------SVAYVPQQPWIQNGTVRENILFGSPYD-EERYDKVIKACALKKDLEILPFGDLTEIG 638 (1381)
T ss_pred cccceEEEcC-------------eEEEeccccHhhCCcHHHhhhcCcccc-HHHHHHHHHHccCHhHHhhcCCCCcceec
Confidence 9999999998 499999999999999999999998753 34444455555666889999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHH-HHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCC
Q 000830 516 ERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSV-QEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGR 594 (1265)
Q Consensus 516 ~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G 594 (1265)
|+|.||||||||||+||||+|+|+||++||||+||+|+|+.++| .++|+.+.++||+|+|||+++++++||+|++|+||
T Consensus 639 ErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G 718 (1381)
T KOG0054|consen 639 ERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDG 718 (1381)
T ss_pred CCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCC
Confidence 99999999999999999999999999999999999999987655 56888888899999999999999999999999999
Q ss_pred EEEEeeCcchhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcc--cCCCC
Q 000830 595 KIVKTGSHEELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLS--HGAAD 672 (1265)
Q Consensus 595 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 672 (1265)
+|++.|+|+|+++. +..+.++......+...+ ...... .....+.+... +.........+...... .....
T Consensus 719 ~I~~~Gty~el~~~-~~~~~~l~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1381)
T KOG0054|consen 719 KIVESGTYEELLKS-GGDFAELAHEEESEQEEE--ASEKDL---ESGESSRESES-RSLESLSSEEEKSKDEKEEEDKLV 791 (1381)
T ss_pred eEecccCHHHHHhc-chhHHHHhhccchhhccc--cccccc---cccccccchhh-hhhhhhcccccccccccchhhHHH
Confidence 99999999999976 777777733222111111 000000 00000000000 00000000000000000 00000
Q ss_pred CCCccchhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----Ccchh-h---hhHHHHHHHH
Q 000830 673 ATEPATAKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYM----DWDTT-Q---REVKKITILF 744 (1265)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~---~~~~~~~~~~ 744 (1265)
..++++.+.+.+.. |+.|+..+.....+...+.......+.....++|+ ++... . .+...+.++|
T Consensus 792 ~~ee~~~G~v~~~v-------Y~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY 864 (1381)
T KOG0054|consen 792 QEEERETGKVSWSV-------YKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVY 864 (1381)
T ss_pred HHHHHhcCEeeHHH-------HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHH
Confidence 11112333344333 33333331111111000111111222333334443 22211 1 2456788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000830 745 CCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQN 824 (1265)
Q Consensus 745 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~ 824 (1265)
.+++++..++..++.+.+...+.++++++|++|+++++++||+|||+ +|+|||+|||++|++.+|..++..+..+++.
T Consensus 865 ~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt--TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~ 942 (1381)
T KOG0054|consen 865 ALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT--TPTGRILNRFSKDIDTVDVLLPFTLEFFLQS 942 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC--CCccchhhhcccchHHHHHhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH----HHHHHHHHhhhHHHHHhccHHH
Q 000830 825 FGLVTASFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKA----NMLAAEAVSNIRTVAAFCSEDK 900 (1265)
Q Consensus 825 ~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~e~l~gi~tIra~~~e~~ 900 (1265)
++.+++.++++.+..|++ +++++|+.+++.+++.+| ...+|+++|..+.. .+|++|++.|+.|||||+.+++
T Consensus 943 ~~~~l~~~~vi~~~~P~f---li~~~pl~v~~~~~~~~Y-~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~r 1018 (1381)
T KOG0054|consen 943 LLNVLGILVVISYVTPWF---LIAIIPLGVIYYFVQRYY-LATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEER 1018 (1381)
T ss_pred HHHHHHHHHHhhHHhHHH---HHHHHHHHHHHHHHHHHH-HHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHH
Confidence 999999988888887754 556667766666655544 44567887764433 3899999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 901 VLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALV 980 (1265)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 980 (1265)
|.+++...++.+.+..+......-++..-..++..+..+.+..+....-.. ..+.+.+-.++.+.+.....++..+...
T Consensus 1019 f~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~-~~~~g~vGLslsyal~lt~~l~~~vR~~ 1097 (1381)
T KOG0054|consen 1019 FIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSG-LISPGLVGLSLSYALQLTGLLQWLVRQS 1097 (1381)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999887665433333322222333222222222221111111 1334544445555666666677777888
Q ss_pred HHHHHHHHHHHHHHHHhcccccccCC----CCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCC
Q 000830 981 PDLLKGNQMAASVFEVLDRKTQVIGD----IGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSG 1056 (1265)
Q Consensus 981 ~~~~~~~~~~~ri~~~~~~~~~~~~~----~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SG 1056 (1265)
.+++..++++||+.++.+.++|.+.. .+++.||.+|.|+|+|++.+|.++ .++|||||||+|+||||||||||||
T Consensus 1098 ~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTG 1176 (1381)
T KOG0054|consen 1098 SELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTG 1176 (1381)
T ss_pred HHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCC
Confidence 89999999999999999977662211 135568999999999999999754 3679999999999999999999999
Q ss_pred CChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchH
Q 000830 1057 SGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAH 1136 (1265)
Q Consensus 1057 SGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~ 1136 (1265)
||||||+++|+|+.+|.+|+|.|||+||+++++++||+++++|||||+||+||+|+||+| ..+++|++||+|+++++++
T Consensus 1177 aGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDP-f~e~sD~~IW~ALe~~~Lk 1255 (1381)
T KOG0054|consen 1177 AGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDP-FDEYSDDEIWEALERCQLK 1255 (1381)
T ss_pred CCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCc-ccccCHHHHHHHHHHhChH
Confidence 999999999999999999999999999999999999999999999999999999999998 6789999999999999999
Q ss_pred HHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCch
Q 000830 1137 SFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLS 1216 (1265)
Q Consensus 1137 ~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ 1216 (1265)
++|+++|+|||++|.|+|.|||.||||++||||||||++|||+||||||++|++||..||++||+.|++||||+||||++
T Consensus 1256 ~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~ 1335 (1381)
T KOG0054|consen 1256 DVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLN 1335 (1381)
T ss_pred HHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHHHhh
Q 000830 1217 TIKNADQISVIESGKIIEQGTHSSLVENEDGAYFKLINLQQ 1257 (1265)
Q Consensus 1217 ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~~~~ 1257 (1265)
||+|||||+|||+|+|+|+|+|++|++++++.|++++.+..
T Consensus 1336 TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~ 1376 (1381)
T KOG0054|consen 1336 TVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAA 1376 (1381)
T ss_pred hhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHH
Confidence 99999999999999999999999999988999987776543
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=9.2e-159 Score=1591.59 Aligned_cols=1151 Identities=20% Similarity=0.250 Sum_probs=840.7
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Q 000830 60 LGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSC--WMYTGERQAAKMR 137 (1265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~lR 137 (1265)
++.++.++..++....|++++.+++.+.... . . .... .+...+++..++..++ ...+. ...++.++...++
T Consensus 305 ~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~--~-~-~~~~-~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~ir~~L~ 377 (1622)
T PLN03130 305 LGGFFKIGNDLSQFVGPLLLNLLLESMQNGE--P-A-WIGY-IYAFSIFVGVVLGVLC--EAQYFQNVMRVGFRLRSTLV 377 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--c-c-hHHH-HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 4444455555555556668889998764321 1 0 0111 1111111111111111 11121 2356677777788
Q ss_pred HHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 138 MAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIAL 217 (1265)
Q Consensus 138 ~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~ 217 (1265)
..+|+|+++++..++++ .++|+++|++++|++.+++++. .+..++..++.+++++++++......+++.++++.++++
T Consensus 378 ~~i~~k~L~l~~~~~~~-~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~ 455 (1622)
T PLN03130 378 AAVFRKSLRLTHEGRKK-FTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFP 455 (1622)
T ss_pred HHHHHHHhcCChhhcCC-CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999987 5899999999999999999874 455555555555555444443222222222233334445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 218 AGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLF 297 (1265)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1265)
+..++.++.++..++.++..+++.+.+.|.++||++||+|+||+.+.+++++.++++.+..++.....++...+......
T Consensus 456 l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~ 535 (1622)
T PLN03130 456 IQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPV 535 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667788888888999999999999999999999999999999999999999999888877776666554433222221
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCC
Q 000830 298 LSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDK 377 (1265)
Q Consensus 298 ~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~ 377 (1265)
.+.++++|++.+.+|.+++|.+++++..+.....|+..++..+..+.+++++++|+.++++.++..... . .....
T Consensus 536 --~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~--~-~~~~~ 610 (1622)
T PLN03130 536 --LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLP--N-PPLEP 610 (1622)
T ss_pred --HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc--C-CcccC
Confidence 234556788888899999999998877777777888888889999999999999999999754332110 0 01111
Q ss_pred CcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCc-ceEEECCeeCCCCChHHH
Q 000830 378 LSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLS-GEILLDGNNIKGLDLKWL 456 (1265)
Q Consensus 378 ~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-G~i~~~g~~~~~~~~~~~ 456 (1265)
..+.|+++|++|+|+++++.++|+|+||+|++||+++||||||||||||+++|+|+++|++ |+|.+.
T Consensus 611 ~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~------------ 678 (1622)
T PLN03130 611 GLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIR------------ 678 (1622)
T ss_pred CCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEc------------
Confidence 2347999999999985445679999999999999999999999999999999999999999 999864
Q ss_pred hhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 457 RQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 457 r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
++|+||+|+||||++||||||+||.|. +++++.++++.+++++++..||+|++|.|||+|.+|||||||||+||||+|
T Consensus 679 -~~Iayv~Q~p~LfngTIreNI~fg~~~-d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly 756 (1622)
T PLN03130 679 -GTVAYVPQVSWIFNATVRDNILFGSPF-DPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVY 756 (1622)
T ss_pred -CeEEEEcCccccCCCCHHHHHhCCCcc-cHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 479999999999999999999999874 688999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHH-HHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHH
Q 000830 537 KNPSILLLDEATSALDAESENSVQ-EALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAA 615 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 615 (1265)
++|+||||||||||||+++++++. ++++...+++|+|+||||++.++.||+|++|++|+|+++|+|+|++++ ++.|++
T Consensus 757 ~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~-~~~~~~ 835 (1622)
T PLN03130 757 SNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNN-GPLFQK 835 (1622)
T ss_pred CCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhc-chhHHH
Confidence 999999999999999999998774 567777789999999999999999999999999999999999999976 788888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHHHHhhchhh
Q 000830 616 LVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKLYSMVRPDW 695 (1265)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (1265)
+...+...++........... ............ ......................++++..+.+.+..+..|.+...
T Consensus 836 l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g 912 (1622)
T PLN03130 836 LMENAGKMEEYVEENGEEEDD-QTSSKPVANGNA--NNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALG 912 (1622)
T ss_pred HHHhccccccccccccccccc-cccccccccccc--ccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhc
Confidence 876543211110000000000 000000000000 00000000000000000000011111222233333333332211
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 696 TY-GVCGTICAIIAGAQMPLFALGVSQALVAYYMDWD-TTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLTLRV 773 (1265)
Q Consensus 696 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 773 (1265)
.. ....+++..+ ....+. .....+..+|.+.. ........+.++|++++++..++.+++.+++.+.+.+++.++
T Consensus 913 ~~~~~~~~~~~~~---~~~~~~-~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L 988 (1622)
T PLN03130 913 GAWVVMILFLCYV---LTEVFR-VSSSTWLSEWTDQGTPKTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRL 988 (1622)
T ss_pred cHHHHHHHHHHHH---HHHHHH-HHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1111111100 001111 11112222232211 111223456777888888888899999999999999999999
Q ss_pred HHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 774 REKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATYPLI 853 (1265)
Q Consensus 774 r~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~ 853 (1265)
|.+++++++++|++|||+ +|+|+++|||++|++.++..++..+..++..++.+++.++++++++|... ++++|+.
T Consensus 989 ~~~l~~~ll~~p~~ffd~--~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~---~~~~pl~ 1063 (1622)
T PLN03130 989 HDAMLGSILRAPMSFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISL---WAIMPLL 1063 (1622)
T ss_pred HHHHHHHHHcCCHHHhcc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH
Confidence 999999999999999996 89999999999999999999999999999998888888888887776432 2334443
Q ss_pred HHHHHHHHHHHHhhhhHHHH----HHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000830 854 ISGHISEKLFFQGYGGNLSK----AYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGI 929 (1265)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1265)
+++...... ..+..++.++ ..+...+++.|+++|++|||+|+.++++.+.+.+..+...+..+.......+....
T Consensus 1064 ~~~~~~~~~-~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~ 1142 (1622)
T PLN03130 1064 VLFYGAYLY-YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIR 1142 (1622)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333222 2223333333 23445689999999999999999999998888877777655444332222222111
Q ss_pred HHHHHHHHHHHHHHHH-HHHHhhhc-cc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000830 930 SQFFIFSSYGLALWYG-SVLMGKEL-AS-----FKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQ 1002 (1265)
Q Consensus 930 ~~~~~~~~~~~~~~~g-~~l~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~ 1002 (1265)
..++. ++.++++ ...+..+. .. .+.+-..+.+.......+..+......++..+.+++|+.++.+.++|
T Consensus 1143 l~~~~----~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E 1218 (1622)
T PLN03130 1143 LETLG----GLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSE 1218 (1622)
T ss_pred HHHHH----HHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 11111 1222222 22222211 10 11111112222333344555556667788899999999999987765
Q ss_pred ccCC----CCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEE
Q 000830 1003 VIGD----IGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVM 1078 (1265)
Q Consensus 1003 ~~~~----~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1078 (1265)
.... ...+.||.+|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||||||||||+++|+|+|+|++|+|+
T Consensus 1219 ~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~ 1297 (1622)
T PLN03130 1219 APLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRIL 1297 (1622)
T ss_pred ccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEE
Confidence 4321 112234667899999999999743 24699999999999999999999999999999999999999999999
Q ss_pred ECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCC
Q 000830 1079 VDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLS 1158 (1265)
Q Consensus 1079 idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1158 (1265)
|||+||+++++++||++|++|||||+||+|||||||+++. +++|+|+|+|++.++++++|.++|+||||+|||+|.+||
T Consensus 1298 IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLS 1376 (1622)
T PLN03130 1298 IDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFS 1376 (1622)
T ss_pred ECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCC
Confidence 9999999999999999999999999999999999999975 689999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecCh
Q 000830 1159 GGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTH 1238 (1265)
Q Consensus 1159 gGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~ 1238 (1265)
|||||||||||||+|+|+|||||||||+||++||+.||++|++.+++||+|+||||++|+++||||+||++|+|+|+|+|
T Consensus 1377 gGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~ 1456 (1622)
T PLN03130 1377 VGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTP 1456 (1622)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCcHHHHHHHHhhc
Q 000830 1239 SSLVENEDGAYFKLINLQQR 1258 (1265)
Q Consensus 1239 ~eLl~~~~g~f~~l~~~~~~ 1258 (1265)
+||+++++|.|++|++.+..
T Consensus 1457 ~eLl~~~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1457 ENLLSNEGSAFSKMVQSTGA 1476 (1622)
T ss_pred HHHHhCCCCHHHHHHHHcCh
Confidence 99998668999999987653
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-157 Score=1584.43 Aligned_cols=1145 Identities=20% Similarity=0.259 Sum_probs=841.6
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 60 LGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMA 139 (1265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~ 139 (1265)
++.++.++..++....|++++.+++.+.... . . .....+...+++..++..++.....+.....+.++...++..
T Consensus 305 ~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~--~-~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~ 379 (1495)
T PLN03232 305 LGGIFKIGHDLSQFVGPVILSHLLQSMQEGD--P-A--WVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAA 379 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--c-c--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555556556668899998764321 1 0 000111111111111111111111122245667777778889
Q ss_pred HHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
Q 000830 140 YLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIV---PLIA 216 (1265)
Q Consensus 140 ~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~---p~~~ 216 (1265)
+|+|+++++..++++ .++|+++|++++|++.+++++ ..+..++..++.+++++++++ +.+++..++.+ .+++
T Consensus 380 i~~k~l~l~~~~~~~-~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~---~~lg~~~l~~~~v~~l~~ 454 (1495)
T PLN03232 380 IFHKSLRLTHEARKN-FASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLY---QQLGVASLFGSLILFLLI 454 (1495)
T ss_pred HHHHHhcCChhhcCC-CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHH
Confidence 999999999999987 589999999999999999986 344444444444443333322 23333333222 2333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 217 LAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVL 296 (1265)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1265)
++..++.++.++..++.++..+++.+.++|.++||++||+|+||+.+.+++++.++++.+..++.....++...+.....
T Consensus 455 pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~ 534 (1495)
T PLN03232 455 PLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIP 534 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566788888999999999999999999999999999999999999999999999998888887766655433222221
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCC
Q 000830 297 FLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLD 376 (1265)
Q Consensus 297 ~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~ 376 (1265)
..+.++++|++++.++.+++|.+++++..+.....|+..++..+..+.++++|.+|+.++++.+++.... . ....
T Consensus 535 --~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~--~-~~~~ 609 (1495)
T PLN03232 535 --VVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQ--N-PPLQ 609 (1495)
T ss_pred --HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc--c-CCcC
Confidence 1233467788888899999999999877777777888888889999999999999999999765432111 1 1111
Q ss_pred CCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH
Q 000830 377 KLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL 456 (1265)
Q Consensus 377 ~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~ 456 (1265)
...+.|+++|++|+|+++++.++|+|+||+|++||+++||||||||||||+++|+|+|+|++|.+. .+
T Consensus 610 ~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------~~ 677 (1495)
T PLN03232 610 PGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------VI 677 (1495)
T ss_pred CCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------Ee
Confidence 123479999999999864456799999999999999999999999999999999999999998763 25
Q ss_pred hhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 457 RQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 457 r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
|++|+||+|+||||++||||||+||.+ .+++++.++++.+++++++..||+|++|.|||+|.+||||||||||||||+|
T Consensus 678 ~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly 756 (1495)
T PLN03232 678 RGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVY 756 (1495)
T ss_pred cCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHh
Confidence 678999999999999999999999986 5788999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHH-HHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHH
Q 000830 537 KNPSILLLDEATSALDAESENSVQE-ALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAA 615 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 615 (1265)
++|+||||||||||||+++++++.+ ++....+++|+|+||||++.++.||+|++|++|+|++.|+|+|++++ ++.|.+
T Consensus 757 ~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~-~~~~~~ 835 (1495)
T PLN03232 757 SNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS-GSLFKK 835 (1495)
T ss_pred cCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc-chhHHH
Confidence 9999999999999999999987754 56666789999999999999999999999999999999999999986 788888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHHHHhhchhh
Q 000830 616 LVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKLYSMVRPDW 695 (1265)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (1265)
++..+...++.....+..+...+. .+.. .............+..........+++...+.+.+..+..|.+..+
T Consensus 836 l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~ 909 (1495)
T PLN03232 836 LMENAGKMDATQEVNTNDENILKL-----GPTV-TIDVSERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVG 909 (1495)
T ss_pred HHHhcccccccccccccccccccc-----cccc-cccccccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcC
Confidence 876543211110000000000000 0000 0000000000000000000000011112223333333344443322
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhc-Ccchh----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 696 TYGVCG-TICAIIAGAQMPLFALGVSQALVAYYM-DWDTT----QREVKKITILFCCAAVITVIVHAIEHLSFGIMGERL 769 (1265)
Q Consensus 696 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 769 (1265)
...... +++..+ ...+......+|+ .|... ......|..+|++++++..++.+++.+++.+.+.++
T Consensus 910 ~~~~~~~~~~~~~--------~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~ 981 (1495)
T PLN03232 910 GLWVVMILLVCYL--------TTEVLRVSSSTWLSIWTDQSTPKSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHA 981 (1495)
T ss_pred cHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 111111 0011112222333 12111 122456778888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 770 TLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVAT 849 (1265)
Q Consensus 770 ~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~ 849 (1265)
+.++|++++++++++|++|||+ +++|+++||+++|++.++..++..+..++..++.+++++++++++++... ++.
T Consensus 982 ~~~lr~~l~~~ll~~p~~ff~~--~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~---~~~ 1056 (1495)
T PLN03232 982 AKRLHDAMLNSILRAPMLFFHT--NPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTISL---WAI 1056 (1495)
T ss_pred HHHHHHHHHHHHHcCCeeeeCc--CCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 9999999999999999999996 89999999999999999999999998888888888777777776665332 223
Q ss_pred HHHHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000830 850 YPLIISGHISEKLFFQGYGGNL----SKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGI 925 (1265)
Q Consensus 850 ~pl~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1265)
+|+.+.+......+ .+..++. ....+...+++.|+++|++|||+|+.++++.+++.+..+...+..+.......+
T Consensus 1057 ~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 1135 (1495)
T PLN03232 1057 MPLLILFYAAYLYY-QSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRW 1135 (1495)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34433333222222 2222223 333445568999999999999999999999888887777666554432222221
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHh-hhcc----cHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000830 926 FYGISQFFIFSSYGLALWY-GSVLMG-KELA----SFKSVMK-SFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLD 998 (1265)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~-g~~l~~-~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~ 998 (1265)
....... .. .+.+++ +...+. .+.. .+...+. .+.+......++..+...+.+++..+.+++|+.++++
T Consensus 1136 l~~~~~~---~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~ 1211 (1495)
T PLN03232 1136 LTIRLET---LG-GVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYID 1211 (1495)
T ss_pred HHHHHHH---HH-HHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111111 11 122222 222222 1211 1111111 2222333444566677778888999999999999998
Q ss_pred ccccccCC--C--CcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCC
Q 000830 999 RKTQVIGD--I--GEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTA 1074 (1265)
Q Consensus 999 ~~~~~~~~--~--~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~ 1074 (1265)
.+++.... . ..+.||..|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||||||||||+++|+|+|+|++
T Consensus 1212 ~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~ 1290 (1495)
T PLN03232 1212 LPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEK 1290 (1495)
T ss_pred CCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCC
Confidence 77664321 1 11224567899999999999643 3469999999999999999999999999999999999999999
Q ss_pred cEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCC
Q 000830 1075 GKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERG 1154 (1265)
Q Consensus 1075 G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G 1154 (1265)
|+|+|||+|++++++++||++|++|||||+||+|||||||+++. +++|+|+|+|++.++++++|+++|+||||+|||+|
T Consensus 1291 G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G 1369 (1495)
T PLN03232 1291 GRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGG 1369 (1495)
T ss_pred ceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCC
Confidence 99999999999999999999999999999999999999999975 78999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEE
Q 000830 1155 VQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIE 1234 (1265)
Q Consensus 1155 ~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive 1234 (1265)
.+|||||||||||||||+|+|+|||||||||+||++||+.||++|++.+++||+|+||||++|+++||||+||++|+|+|
T Consensus 1370 ~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE 1449 (1495)
T PLN03232 1370 ENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLE 1449 (1495)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhhhhhcCCcHHHHHHHHhhcc
Q 000830 1235 QGTHSSLVENEDGAYFKLINLQQRQ 1259 (1265)
Q Consensus 1235 ~Gt~~eLl~~~~g~f~~l~~~~~~~ 1259 (1265)
+|+|+||+++++|.|++|++.+...
T Consensus 1450 ~Gt~~eLl~~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1450 YDSPQELLSRDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred ECCHHHHHhCCCCHHHHHHHHhChh
Confidence 9999999996667999999887543
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.7e-152 Score=1532.94 Aligned_cols=1155 Identities=19% Similarity=0.250 Sum_probs=853.9
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 62 SIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYL 141 (1265)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~ 141 (1265)
++..++..++....|++++.+++.+.... .+ ......++..++++.++..++.....+.....+.++...++..+|
T Consensus 323 ~~~~l~~~~~~~~~P~ll~~li~~~~~~~-~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy 398 (1522)
T TIGR00957 323 FCFKAIHDLMMFIGPQILSLLIRFVNDPM-AP---DWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVY 398 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444445557899998764321 01 110111112222222223333322333345677888888999999
Q ss_pred HHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 142 RSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGM 221 (1265)
Q Consensus 142 ~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~ 221 (1265)
+|+++++..++++ .++|+++|++++|++.+.++. ..+..++..++.+++++++++......+++.++++++++++..+
T Consensus 399 ~K~L~l~~~~~~~-~~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~ 476 (1522)
T TIGR00957 399 RKALVITNSARKS-STVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAV 476 (1522)
T ss_pred HHHHhCChhhcCC-CCHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987 589999999999999998855 34444444444444444443332222345555666677777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 222 YAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWS 301 (1265)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (1265)
+.++.++..++.++..+++.+.+.|.++||++||+|+||+.+.+++++.++++.+..++......+.......... .+
T Consensus 477 ~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~--~~ 554 (1522)
T TIGR00957 477 MAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPF--LV 554 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Confidence 8899999999999999999999999999999999999999999999999999888877766665443322211111 11
Q ss_pred HHHHHHHHHHH--hcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCC-C
Q 000830 302 LLVWYVSVVVH--KHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDK-L 378 (1265)
Q Consensus 302 ~~~~~g~~~~~--~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~-~ 378 (1265)
.++.++.+.+. ++.++.+.+|+.+..+.....|+..++..+..+.+++++.+|+.++++.+++... ......... .
T Consensus 555 ~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~-~~~~~~~~~~~ 633 (1522)
T TIGR00957 555 ALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPD-SIERRTIKPGE 633 (1522)
T ss_pred HHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc-cccccccCCCC
Confidence 22234455554 3567888888877655566678888999999999999999999999976543211 000011111 1
Q ss_pred cccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhh
Q 000830 379 SGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQ 458 (1265)
Q Consensus 379 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~ 458 (1265)
.+.|+++|++|+|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 634 ~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 699 (1522)
T TIGR00957 634 GNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG------------- 699 (1522)
T ss_pred CCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------------
Confidence 2379999999999743 34699999999999999999999999999999999999999999999997
Q ss_pred heeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 459 QIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
+|+||+|+||+|++||+|||.+|.+. ++++..++++.+++.+++..+|+|++|.+|++|.+|||||||||+||||+|++
T Consensus 700 ~i~yv~Q~~~l~~~Ti~eNI~~g~~~-~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~ 778 (1522)
T TIGR00957 700 SVAYVPQQAWIQNDSLRENILFGKAL-NEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSN 778 (1522)
T ss_pred EEEEEcCCccccCCcHHHHhhcCCcc-CHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 59999999999999999999999763 45666777777888899999999999999999999999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHH---HcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHH
Q 000830 539 PSILLLDEATSALDAESENSVQEALDR---VMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAA 615 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~---~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 615 (1265)
|+|+|||||||+||+++++.+.+.+.+ +.+++|+|+|||+++.+..||+|++|++|+|++.|+|+++.++ ++.|.+
T Consensus 779 ~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~~~~ 857 (1522)
T TIGR00957 779 ADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQR-DGAFAE 857 (1522)
T ss_pred CCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhc-chhHHH
Confidence 999999999999999999999998853 4568999999999999999999999999999999999999876 677887
Q ss_pred HHHHHHHhhhccCCCCC---C-CCCCCCc--------ccccccccCCC----cccc-cC--ccc-chhhhcccCCC-C--
Q 000830 616 LVQLQEAASQQSNSSQC---P-NMGRPLS--------IKFSRELSGTR----TSFG-AS--FRS-EKESVLSHGAA-D-- 672 (1265)
Q Consensus 616 ~~~~~~~~~~~~~~~~~---~-~~~~~~~--------~~~~~~~~~~~----~~~~-~~--~~~-~~~~~~~~~~~-~-- 672 (1265)
+...+...++.+..... . ....... .....+..... .+.. .. ... ........... .
T Consensus 858 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1522)
T TIGR00957 858 FLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETW 937 (1522)
T ss_pred HHHhhccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchh
Confidence 77544321111000000 0 0000000 00000000000 0000 00 000 00000000000 0
Q ss_pred ---CCCccchhhhHHHHHHHhhchhhHHHHHH-HHHHHHHHHHHHH--HHHHHHHHHHHhhcCcch---hhhhHHHHHHH
Q 000830 673 ---ATEPATAKHVSAIKLYSMVRPDWTYGVCG-TICAIIAGAQMPL--FALGVSQALVAYYMDWDT---TQREVKKITIL 743 (1265)
Q Consensus 673 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 743 (1265)
.++.+..+.+.+. .|+.|+..+ ....++..+...+ ....+...+..+|.+... .......+..+
T Consensus 938 ~~~~~e~~~~g~v~~~-------~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~i 1010 (1522)
T TIGR00957 938 KLMEADKAQTGQVELS-------VYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSV 1010 (1522)
T ss_pred hhHHHHHHhcCcccHH-------HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHH
Confidence 0000111122222 223332221 1111110011110 111122222223332110 11122345567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000830 744 FCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQ 823 (1265)
Q Consensus 744 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~ 823 (1265)
|++++++..++.++..+++.+.+.++..++|++++++++++|++|||. +++|+++|||++|++.++..++..+..++.
T Consensus 1011 y~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnR~s~Di~~id~~l~~~~~~~~~ 1088 (1522)
T TIGR00957 1011 YGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER--TPSGNLVNRFSKELDTVDSMIPPVIKMFMG 1088 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888888888888899999999999999999999999999996 899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHH
Q 000830 824 NFGLVTASFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLE 903 (1265)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~ 903 (1265)
.++.+++.++++++.+|.+++++++.+++.+.......+..+...+......+...+++.|+++|++|||+|++++++.+
T Consensus 1089 ~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~ 1168 (1522)
T TIGR00957 1089 SLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIH 1168 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHH
Confidence 99998888888888888765544443333332222222222222222233345566899999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 904 LYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMG-KELASFKSVMKSFMVLIVTALAMGETLALVPD 982 (1265)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1265)
++.+..+...+..+.......+......++.. .+.++.+...+. .+.++.+.+..++.+......++..+...+.+
T Consensus 1169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~ 1245 (1522)
T TIGR00957 1169 QSDLKVDENQKAYYPSIVANRWLAVRLECVGN---CIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSE 1245 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988887766554444444333333322 223333443332 46678888877777777788888889999999
Q ss_pred HHHHHHHHHHHHHHhcccccccC--CC--CcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCC
Q 000830 983 LLKGNQMAASVFEVLDRKTQVIG--DI--GEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSG 1058 (1265)
Q Consensus 983 ~~~~~~~~~ri~~~~~~~~~~~~--~~--~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSG 1058 (1265)
++..+.+++|+.++.+.+++... +. ..+.||.+|.|+|+||+|+|+++. +++|+|+||+|+|||+||||||||||
T Consensus 1246 ~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~-~~vL~~is~~I~~GekiaIVGrTGsG 1324 (1522)
T TIGR00957 1246 METNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDL-DLVLRHINVTIHGGEKVGIVGRTGAG 1324 (1522)
T ss_pred HHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCC-cccccceeEEEcCCCEEEEECCCCCC
Confidence 99999999999999987665431 11 112346679999999999998542 46999999999999999999999999
Q ss_pred hHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHH
Q 000830 1059 KSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSF 1138 (1265)
Q Consensus 1059 KSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~ 1138 (1265)
||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+|||||||++. ++++|+|+|+|++.++++++
T Consensus 1325 KSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~-~~~sdeei~~al~~a~l~~~ 1403 (1522)
T TIGR00957 1325 KSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPF-SQYSDEEVWWALELAHLKTF 1403 (1522)
T ss_pred HHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcc-cCCCHHHHHHHHHHcCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999974 47999999999999999999
Q ss_pred HHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhh
Q 000830 1139 ISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTI 1218 (1265)
Q Consensus 1139 i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti 1218 (1265)
|.++|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.||++|++.+++||+|+||||++++
T Consensus 1404 I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti 1483 (1522)
T TIGR00957 1404 VSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTI 1483 (1522)
T ss_pred HhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHHHh
Q 000830 1219 KNADQISVIESGKIIEQGTHSSLVENEDGAYFKLINLQ 1256 (1265)
Q Consensus 1219 ~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~~~ 1256 (1265)
++||||+||++|+|+|+|+|+||++ .+|.|++|+++.
T Consensus 1484 ~~~DrIlVld~G~IvE~G~~~eLl~-~~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1484 MDYTRVIVLDKGEVAEFGAPSNLLQ-QRGIFYSMAKDA 1520 (1522)
T ss_pred HhCCEEEEEECCEEEEECCHHHHHh-CCCHHHHHHHHc
Confidence 9999999999999999999999998 479999999864
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.6e-146 Score=1470.15 Aligned_cols=1156 Identities=18% Similarity=0.222 Sum_probs=856.1
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 60 LGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMA 139 (1265)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~ 139 (1265)
+++++.++..++....|++++.+++.+... .........+.+.+++..++..++.....+.....+.++...++..
T Consensus 248 ~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~----~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~~ 323 (1560)
T PTZ00243 248 WQIPFKLLSDVCTLTLPVLLKYFVKFLDAD----NATWGRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNAL 323 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555566666666788888875321 1111100111112222222333333334444556666777778888
Q ss_pred HHHHHHhCCchhhcc-ccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 140 YLRSMLNQDISLFDT-EASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALA 218 (1265)
Q Consensus 140 ~~~~l~~~~~~~f~~-~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~ 218 (1265)
+|+|+++++...+.. +.++|+++|.+++|++.+.+++. .+..++...+.+++++++++.+....+++.++++++++++
T Consensus 324 if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~-~~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~~pl 402 (1560)
T PTZ00243 324 IFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQ-YCMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVTLPL 402 (1560)
T ss_pred HHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999998877741 14789999999999999999974 4556677777777777777766666788888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 219 GGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFL 298 (1265)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1265)
..++.++..+..++..+..+++.+.+.|.++|||+||.++||+.+.+++++.++++.+..++.....++...+......+
T Consensus 403 ~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~p~l 482 (1560)
T PTZ00243 403 NGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFVNNATPTL 482 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999888777766655444333333
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccc----cc-c----
Q 000830 299 SWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSK----AS-S---- 369 (1265)
Q Consensus 299 ~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~----~~-~---- 369 (1265)
.. ++.++.+.+.++.++++.+|+++..+..+..|+..++..+..+.++.+|++||.++++.++... +. .
T Consensus 483 ~~--~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~ 560 (1560)
T PTZ00243 483 MI--AVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYWRE 560 (1560)
T ss_pred HH--HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccchhhccc
Confidence 22 2345667778899999999998877777778999999999999999999999999997543100 00 0
Q ss_pred ----cc--C-----C----------C---------------------------CCCCcccEEEEeEEEECCCC-------
Q 000830 370 ----KT--G-----R----------K---------------------------LDKLSGHIEFKDVSFCYPSR------- 394 (1265)
Q Consensus 370 ----~~--~-----~----------~---------------------------~~~~~~~i~~~~v~f~y~~~------- 394 (1265)
.. . . . .....+.+.++|++|+++..
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (1560)
T PTZ00243 561 QREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHIVE 640 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccccccccccccccccccccc
Confidence 00 0 0 0 00011347788888775410
Q ss_pred ------------------------------CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEEC
Q 000830 395 ------------------------------PDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLD 444 (1265)
Q Consensus 395 ------------------------------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~ 444 (1265)
.++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++
T Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~~~ 720 (1560)
T PTZ00243 641 GGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVWAE 720 (1560)
T ss_pred ccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEEC
Confidence 12458999999999999999999999999999999999999999999874
Q ss_pred CeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChH
Q 000830 445 GNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGG 524 (1265)
Q Consensus 445 g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 524 (1265)
++|+||+|+||+|++||+|||.++.+. ..+++.++.+.+++.++++.+|+|++|.+|++|.+||||
T Consensus 721 -------------~~i~yv~Q~~~l~~~Tv~enI~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSGG 786 (1560)
T PTZ00243 721 -------------RSIAYVPQQAWIMNATVRGNILFFDEE-DAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLSGG 786 (1560)
T ss_pred -------------CeEEEEeCCCccCCCcHHHHHHcCChh-hHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCCHH
Confidence 369999999999999999999998653 345667777778888999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHH-HHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcc
Q 000830 525 QKQRIAISRAIVKNPSILLLDEATSALDAESENSVQE-ALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHE 603 (1265)
Q Consensus 525 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~ 603 (1265)
|||||+|||||+.+|+|||||||||+||+++++.+.+ ++....+|+|+|+|||+++.+..||+|++|++|++++.|+++
T Consensus 787 QkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~~~ 866 (1560)
T PTZ00243 787 QKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVEFSGSSA 866 (1560)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEecCHH
Confidence 9999999999999999999999999999999887765 444455689999999999999999999999999999999999
Q ss_pred hhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhccc-C----CCCCCCccc
Q 000830 604 ELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSH-G----AADATEPAT 678 (1265)
Q Consensus 604 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~ 678 (1265)
++++. +.|..+........+..+.....+.. ..+............... ............ . .....+++.
T Consensus 867 ~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~e~~~ 942 (1560)
T PTZ00243 867 DFMRT--SLYATLAAELKENKDSKEGDADAEVA-EVDAAPGGAVDHEPPVAK-QEGNAEGGDGAALDAAAGRLMTREEKA 942 (1560)
T ss_pred HHHhC--hHHHHHHHhhcccccccccccccccc-cccccccccccccccccc-cccccccccccccccccchhhhHHHHh
Confidence 99864 45766654322111100000000000 000000000000000000 000000000000 0 000001111
Q ss_pred hhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhc-Ccch--hhhhHHHHHHHHHHHHHHHH
Q 000830 679 AKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVS---QALVAYYM-DWDT--TQREVKKITILFCCAAVITV 752 (1265)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~ 752 (1265)
.+.+.+.. |++|+........ .+.+++.+.+. .....+|+ .|.. .......+..+|+++.++..
T Consensus 943 ~g~v~~~~-------y~~Y~~~~g~~~~---~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~l~~y~~~~~~~~ 1012 (1560)
T PTZ00243 943 SGSVPWST-------YVAYLRFCGGLHA---AGFVLATFAVTELVTVSSGVWLSMWSTRSFKLSAATYLYVYLGIVLLGT 1012 (1560)
T ss_pred cCcccHHH-------HHHHHHHhhhHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccHHHHHHHHHHHHH
Confidence 12222222 2222221110000 00111111111 11222222 1111 11122345666777666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 753 IVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASF 832 (1265)
Q Consensus 753 i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~ 832 (1265)
++..++.+.....+.+...++|.++|++++++|+.|||+ +++|+++|||++|++.++..++..+..++..++.+++.+
T Consensus 1013 ~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~--~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~l 1090 (1560)
T PTZ00243 1013 FSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT--TPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSI 1090 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC--CCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777777788889999999999999999999996 899999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH----HHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHH
Q 000830 833 VIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSK----AYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRE 908 (1265)
Q Consensus 833 ~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~ 908 (1265)
+++++.+|.+. ++++|+.++...+... +....++.++ ..+...+++.|++.|++|||+|+.++++.+++.+.
T Consensus 1091 i~~~~~~p~~~---~~~i~~~~~~~~i~~~-~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~ 1166 (1560)
T PTZ00243 1091 LVTSASQPFVL---VALVPCGYLYYRLMQF-YNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRR 1166 (1560)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHH
Confidence 88888887433 3334444443333332 2333344443 34455689999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 909 LVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVL--MGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKG 986 (1265)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1265)
.+...+..+.......+......++..+...+..+++... ...+..+.+.+..++.+......++..+...+.+++..
T Consensus 1167 ~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~ 1246 (1560)
T PTZ00243 1167 LDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEAD 1246 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988887766555555544444444444433333444332 22334566666555556666677788888889999999
Q ss_pred HHHHHHHHHHhccccccc-C--------------------------C-CCc---ccCCCcccEEEEeEEEECCCCCCccc
Q 000830 987 NQMAASVFEVLDRKTQVI-G--------------------------D-IGE---ELTNVEGTIELRGVHFSYPSRPEVVI 1035 (1265)
Q Consensus 987 ~~~~~ri~~~~~~~~~~~-~--------------------------~-~~~---~~~~~~g~I~~~~Vsf~Y~~~~~~~v 1035 (1265)
+.+++|+.++++..++++ . . ... +.++..|.|+|+||+|+|++. .++|
T Consensus 1247 ~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~v 1325 (1560)
T PTZ00243 1247 MNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLV 1325 (1560)
T ss_pred HHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCce
Confidence 999999999986433211 0 0 000 112345889999999999753 3469
Q ss_pred ccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhc
Q 000830 1036 FKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENIL 1115 (1265)
Q Consensus 1036 L~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~ 1115 (1265)
|+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+|||||||+
T Consensus 1326 L~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNId 1405 (1560)
T PTZ00243 1326 LRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVD 1405 (1560)
T ss_pred eecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC-CCEEEEecCcCCCCHHHHHH
Q 000830 1116 YGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKN-PEILLLDEATSALDVESERV 1194 (1265)
Q Consensus 1116 ~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~-p~ILlLDEaTSaLD~~te~~ 1194 (1265)
++ ++++|+|+|+|++.++++++|.++|+||||.|||+|.||||||||||||||||+++ |+|||||||||+||++||+.
T Consensus 1406 p~-~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~ 1484 (1560)
T PTZ00243 1406 PF-LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQ 1484 (1560)
T ss_pred cc-cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHH
Confidence 85 57899999999999999999999999999999999999999999999999999996 89999999999999999999
Q ss_pred HHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHHHhhc
Q 000830 1195 VQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENEDGAYFKLINLQQR 1258 (1265)
Q Consensus 1195 I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~~~~~ 1258 (1265)
|+++|++.+++||+|+||||++++.+||+|+||++|+|+|+|+|+||+++++|.|++|++.+..
T Consensus 1485 Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~ 1548 (1560)
T PTZ00243 1485 IQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGR 1548 (1560)
T ss_pred HHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 9999999999999999999999999999999999999999999999998678999999987754
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.7e-144 Score=1451.64 Aligned_cols=1139 Identities=18% Similarity=0.244 Sum_probs=824.4
Q ss_pred hhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Q 000830 70 VSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDI 149 (1265)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~ 149 (1265)
++....|++++.+++.+.... ... ......+++.++++.++..++.....+.....+.++...+...+|+|+++++.
T Consensus 94 ~~~~~~P~ll~~li~~~~~~~--~~~-~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~ 170 (1490)
T TIGR01271 94 ATKAVQPLLLGRIIASYDPFN--APE-REIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTLKLSS 170 (1490)
T ss_pred HHHHHHHHHHHHHHHHhccCC--CCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 333444457889988763211 000 01111122222222223333333344444455666666666677999999999
Q ss_pred hhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 150 SLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGL 229 (1265)
Q Consensus 150 ~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~ 229 (1265)
..+++ .++|+++|++++|++.+.+++... ..+....+.+++++++++.+....+++.++++++++++..+++++..+.
T Consensus 171 ~~~~~-~~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~~~~~ 248 (1490)
T TIGR01271 171 RVLDK-ISTGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQKMMPY 248 (1490)
T ss_pred HHhcC-CCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99986 589999999999999999976543 3444555555666666666555677888888888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 230 IARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSV 309 (1265)
Q Consensus 230 ~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 309 (1265)
.++.++..+++.+.++|.++|||+||+|+||+.+.+++++.++++.+..++..........+..+... .+.++.++.+
T Consensus 249 ~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~--~~~~~~f~~y 326 (1490)
T TIGR01271 249 RDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGF--FVVFLSVVPY 326 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888877665444333222222 2334455666
Q ss_pred HHHhcccchhHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCcccEEEEeEE
Q 000830 310 VVHKHISNGGESFTTMLNVVIAGLSLG-QAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVS 388 (1265)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~ 388 (1265)
.+.++ ++.+.+|+++.++..+..++. .++..+..+.++.++++||.++++.++.... . . ......++++|++
T Consensus 327 ~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~-~---~--~~~~~~i~~~~~~ 399 (1490)
T TIGR01271 327 ALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTL-E---Y--NLTTTEVEMVNVT 399 (1490)
T ss_pred HHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc-c---c--cCCCCceEEecce
Confidence 66544 577888887655555555653 5777889999999999999999975432111 0 0 0112359999999
Q ss_pred EECCCCC-------------------------------CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCC
Q 000830 389 FCYPSRP-------------------------------DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPL 437 (1265)
Q Consensus 389 f~y~~~~-------------------------------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~ 437 (1265)
|+|+... ..++|+|+||+|++|++++|+||||||||||+++|+|+++|+
T Consensus 400 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~~~~ 479 (1490)
T TIGR01271 400 ASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGELEPS 479 (1490)
T ss_pred EecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC
Confidence 9995310 135899999999999999999999999999999999999999
Q ss_pred cceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCC
Q 000830 438 SGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGER 517 (1265)
Q Consensus 438 ~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~ 517 (1265)
+|+|.++| +|+||+|+||+|++||+|||.||.+ .+.++..++++.+++.+++..+|+|++|.+|++
T Consensus 480 ~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~ 545 (1490)
T TIGR01271 480 EGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDKTVLGEG 545 (1490)
T ss_pred CceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhccccccccccCc
Confidence 99999998 4999999999999999999999975 334445556666677889999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHH-HHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEE
Q 000830 518 GIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQE-ALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKI 596 (1265)
Q Consensus 518 g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i 596 (1265)
|.+|||||||||+||||++++|+|||||||||+||+++++.+.+ ++.++.+++|+|+|||+++.+..||+|++|++|+|
T Consensus 546 g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i 625 (1490)
T TIGR01271 546 GITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVC 625 (1490)
T ss_pred CCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999987 56777789999999999999999999999999999
Q ss_pred EEeeCcchhccCCchHHHHHHHHHHH-hh---hc------c-------C-CC-----CCC---C--CCCCCc-ccc----
Q 000830 597 VKTGSHEELISNPNSAYAALVQLQEA-AS---QQ------S-------N-SS-----QCP---N--MGRPLS-IKF---- 643 (1265)
Q Consensus 597 ~~~g~~~~l~~~~~~~~~~~~~~~~~-~~---~~------~-------~-~~-----~~~---~--~~~~~~-~~~---- 643 (1265)
++.|+++++.+. ++.|.+....... .+ +. + . .. +.. + ...+.. ...
T Consensus 626 ~~~g~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (1490)
T TIGR01271 626 YFYGTFSELQAK-RPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSI 704 (1490)
T ss_pred EEEcCHHHHHhc-ChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999875 5566555431100 00 00 0 0 00 000 0 000000 000
Q ss_pred ------------------cc----ccc--CCCcc-----------------ccc-----------Ccc-------cc---
Q 000830 644 ------------------SR----ELS--GTRTS-----------------FGA-----------SFR-------SE--- 661 (1265)
Q Consensus 644 ------------------~~----~~~--~~~~~-----------------~~~-----------~~~-------~~--- 661 (1265)
.. +.. ..... ... ... ..
T Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1490)
T TIGR01271 705 ILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNR 784 (1490)
T ss_pred cccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccc
Confidence 00 000 00000 000 000 00
Q ss_pred -----hh---hhc------------c-------c-CCC-------C-----------CCCccchhhhHHHHHHHhhchhh
Q 000830 662 -----KE---SVL------------S-------H-GAA-------D-----------ATEPATAKHVSAIKLYSMVRPDW 695 (1265)
Q Consensus 662 -----~~---~~~------------~-------~-~~~-------~-----------~~~~~~~~~~~~~~~~~~~~~~~ 695 (1265)
++ ... . . ... + .+++...+.+.+. .|+
T Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~-------vY~ 857 (1490)
T TIGR01271 785 GENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWN-------TYL 857 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHH-------HHH
Confidence 00 000 0 0 000 0 0000001112221 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-Ccchh---------h--------------hhHHHH-HHHHHHHHHH
Q 000830 696 TYGVCGTICAIIAGAQMPLFALGVSQALVAYYM-DWDTT---------Q--------------REVKKI-TILFCCAAVI 750 (1265)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~--------------~~~~~~-~~~~~~~~~~ 750 (1265)
.|+..+.....+...+...+...+...+..+|+ .|... . .....| .++|++++++
T Consensus 858 ~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1490)
T TIGR01271 858 RYITTNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADS 937 (1490)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHH
Confidence 333221100000000001111122233333443 22110 0 011122 3344444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 751 TVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTA 830 (1265)
Q Consensus 751 ~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~ 830 (1265)
..++.+++.+++.+.+.+.+.++|.+++++++++|++||++ +++|+++|||++|++.++..++..+..++..++.+++
T Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~ 1015 (1490)
T TIGR01271 938 VLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT--MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLG 1015 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677788888999999999999999999999999999996 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH----HHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHH
Q 000830 831 SFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSK----AYLKANMLAAEAVSNIRTVAAFCSEDKVLELYS 906 (1265)
Q Consensus 831 ~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~ 906 (1265)
.++++++++|.+.+ +++|+++++.++...+.+ ..++.++ ..+...+++.|++.|+.|||+|++++++.+++.
T Consensus 1016 ~l~~i~~~~p~l~l---~~~~l~~~~~~~~~~~~~-~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~ 1091 (1490)
T TIGR01271 1016 AIFVVSVLQPYIFI---AAIPVAVIFIMLRAYFLR-TSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFH 1091 (1490)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHH
Confidence 98888888887544 344444443333333332 2334333 334456899999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 907 RELVEPSKRSFIRGQIAGIFYGISQFFIFSSYG--LALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLL 984 (1265)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1265)
+..+...+..+.......+......++...... +.++++... ...+.+..++.+.......+..+...+.++.
T Consensus 1092 ~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~~-----~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le 1166 (1490)
T TIGR01271 1092 KALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTNQ-----DGEGEVGIILTLAMNILSTLQWAVNSSIDVD 1166 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998876554443333222222222222111111 112222221 2222222223333344445566667778888
Q ss_pred HHHHHHHHHHHHhcccccccCC-C-----------------CcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCC
Q 000830 985 KGNQMAASVFEVLDRKTQVIGD-I-----------------GEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAG 1046 (1265)
Q Consensus 985 ~~~~~~~ri~~~~~~~~~~~~~-~-----------------~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~G 1046 (1265)
..+.+++|+.++.+.+++.... . .++.||..|.|+|+||+|+|++. .+++|+|+||+|+||
T Consensus 1167 ~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~G 1245 (1490)
T TIGR01271 1167 GLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGG 1245 (1490)
T ss_pred HHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCC
Confidence 9999999999999776553211 0 01124567899999999999853 457999999999999
Q ss_pred cEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHH
Q 000830 1047 KSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEV 1126 (1265)
Q Consensus 1047 e~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei 1126 (1265)
|+||||||||||||||+++|+|+|+ ++|+|+|||+||++++++++|++|+||||||+||+||||+||++. ..++|+++
T Consensus 1246 ekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~-~~~tdeei 1323 (1490)
T TIGR01271 1246 QRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPY-EQWSDEEI 1323 (1490)
T ss_pred CEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcc-cCCCHHHH
Confidence 9999999999999999999999997 799999999999999999999999999999999999999999985 46899999
Q ss_pred HHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCc
Q 000830 1127 IEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKR 1206 (1265)
Q Consensus 1127 ~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~ 1206 (1265)
|+|++.+++++++.++|+||||+|||+|.+|||||||||||||||+++|+|||||||||+||++||+.|+++|++.+++|
T Consensus 1324 ~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~ 1403 (1490)
T TIGR01271 1324 WKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNC 1403 (1490)
T ss_pred HHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHHHhhcc
Q 000830 1207 TTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENEDGAYFKLINLQQRQ 1259 (1265)
Q Consensus 1207 TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~~~~~~ 1259 (1265)
|||+||||++++.+||||+||++|+|+|.|+|++|++ .+|.|++|++.+.+.
T Consensus 1404 TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~-~~~~f~~l~~~~~~~ 1455 (1490)
T TIGR01271 1404 TVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLN-ETSLFKQAMSAADRL 1455 (1490)
T ss_pred EEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHc-CCcHHHHHHHHhChh
Confidence 9999999999999999999999999999999999997 689999999877643
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-110 Score=979.21 Aligned_cols=574 Identities=40% Similarity=0.614 Sum_probs=537.4
Q ss_pred HhHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000830 41 VSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWI 120 (1265)
Q Consensus 41 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (1265)
..+++++.|.++. |+.+..+.++.++......+.|.+.|+++|.+.... .....+...+..+.++.++..++.++
T Consensus 133 ~~~~rl~~l~~~~-~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~----~~~~~~~~~~~~l~~l~~~~a~~~~~ 207 (716)
T KOG0058|consen 133 TLLKRLLGLLKPE-WKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGD----DSADALKRACTILLGLFLIGALANAI 207 (716)
T ss_pred hHHHHHHHHhchh-HHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhcc----chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999876 445677777777777778888889999999876511 11334445566677778888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 121 EVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFAR 200 (1265)
Q Consensus 121 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 200 (1265)
+.+++.++++++..++|.++|+++++++++|||. +.+||++||++.|++.+.+.++..+...+.+.+..++++++|+++
T Consensus 208 r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~-nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~ 286 (716)
T KOG0058|consen 208 RGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDE-NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSL 286 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhh
Confidence 9999999999999999999999999999999998 589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 000830 201 VWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRK 280 (1265)
Q Consensus 201 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~ 280 (1265)
||+|+++.++.+|+++++..+++++.++..++.|++.++.+...+|.+++|||||+|+.|+.+.++|.+..++..+..+|
T Consensus 287 S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k 366 (716)
T KOG0058|consen 287 SWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKK 366 (716)
T ss_pred hHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Q 000830 281 AGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIE 360 (1265)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~ 360 (1265)
.+...+++.....+..++..+.+++||++++..|.++.|.+.++++|......++..+...++.++++..|.+|+||++|
T Consensus 367 ~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~d 446 (716)
T KOG0058|consen 367 EAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMD 446 (716)
T ss_pred HHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcce
Q 000830 361 RDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGE 440 (1265)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 440 (1265)
++|..+.. ....+....|.|+|+||+|+||.+++.++|+|+||+|+|||+||+|||||+||||++++|.+||+|++|+
T Consensus 447 r~P~i~~~--G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~ 524 (716)
T KOG0058|consen 447 RKPRIPLT--GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGR 524 (716)
T ss_pred cCCCCCCC--CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCe
Confidence 99887653 1122235789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCC
Q 000830 441 ILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQ 520 (1265)
Q Consensus 441 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 520 (1265)
|.+||+||+++++.+||++||+|.|||.||++||+|||.||.+++++|++.+||++|++|+||.++|+||||.|||+|.+
T Consensus 525 IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~q 604 (716)
T KOG0058|consen 525 ILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQ 604 (716)
T ss_pred EEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEee
Q 000830 521 LSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 521 LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 600 (1265)
|||||||||||||||++||.||||||||||||+++|..|+++|.++++++|||+|+|||+|+++||+|+|+++|+++|.|
T Consensus 605 LSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G 684 (716)
T KOG0058|consen 605 LSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMG 684 (716)
T ss_pred ccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhccCCchHHHHHHHHHHH
Q 000830 601 SHEELISNPNSAYAALVQLQEA 622 (1265)
Q Consensus 601 ~~~~l~~~~~~~~~~~~~~~~~ 622 (1265)
+|+||++++++.|+++++.|..
T Consensus 685 ~h~eLl~~~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 685 THDELLSKPNGLYAKLVQRQLD 706 (716)
T ss_pred cHHHHhhCcccHHHHHHHHhcc
Confidence 9999999978999999987753
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.8e-109 Score=969.84 Aligned_cols=573 Identities=36% Similarity=0.592 Sum_probs=543.9
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 683 SAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSF 762 (1265)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 762 (1265)
..++++.+.+++|+++..+..+.++......+.+.+.+++++..+. ..............+.++.++..++.+++.+++
T Consensus 134 ~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~-~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~ 212 (716)
T KOG0058|consen 134 LLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISE-GDDSADALKRACTILLGLFLIGALANAIRGGLL 212 (716)
T ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999999888888877788888888887765 112233444556777888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 763 GIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRI 842 (1265)
Q Consensus 763 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 842 (1265)
.++++++..++|..+|+++++++++|||. |.+|++++|+++|...+.+.++..+...+.+++..++++.+|+.++|.+
T Consensus 213 ~~a~~rv~~rlR~~lF~sil~QdiaFFD~--nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~L 290 (716)
T KOG0058|consen 213 QYAGERVVARLRTDLFRSLLRQDIAFFDE--NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRL 290 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcc--CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHH
Confidence 99999999999999999999999999997 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000830 843 TLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQI 922 (1265)
Q Consensus 843 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1265)
+++.+..+|++.+...++.+++++.+++.+++..+++....|.+.+++|||+|+.|++..++|.+.+++..+...+.+..
T Consensus 291 tlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a 370 (716)
T KOG0058|consen 291 TLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVA 370 (716)
T ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000830 923 AGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQ 1002 (1265)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~ 1002 (1265)
.+++++..++........++|+|+.++..+.++.+++..++++......++..+...+.++.++..+++|+++++|++|.
T Consensus 371 ~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~ 450 (716)
T KOG0058|consen 371 YGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPR 450 (716)
T ss_pred hhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcccC-CCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECC
Q 000830 1003 VIGDIGEELT-NVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDG 1081 (1265)
Q Consensus 1003 ~~~~~~~~~~-~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG 1081 (1265)
.+.. +...| ..+|.|+|+||+|+||.||+.+||||+||+|+|||+||+||||||||||++++|.|||+|++|+|++||
T Consensus 451 i~~~-G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG 529 (716)
T KOG0058|consen 451 IPLT-GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDG 529 (716)
T ss_pred CCCC-CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECC
Confidence 7655 43333 578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhH
Q 000830 1082 IDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQ 1161 (1265)
Q Consensus 1082 ~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1161 (1265)
+||++++.++||++||+|.|||+||+|||+|||.||.+.+++|||.+|+++|++|+||.++|+||||.|||+|.+|||||
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQ 609 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQ 609 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhh
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||||||||||+|||+||||||||||||+++|..||++|.+..+++|||+|||||+||++||+|+|+++|+|+|.|+|+||
T Consensus 610 KQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eL 689 (716)
T KOG0058|consen 610 KQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDEL 689 (716)
T ss_pred HHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcHHHHHHHHhhcc
Q 000830 1242 VENEDGAYFKLINLQQRQ 1259 (1265)
Q Consensus 1242 l~~~~g~f~~l~~~~~~~ 1259 (1265)
+++++|.|++|+++|...
T Consensus 690 l~~~~gly~~Lv~~q~~~ 707 (716)
T KOG0058|consen 690 LSKPNGLYAKLVQRQLDS 707 (716)
T ss_pred hhCcccHHHHHHHHhccc
Confidence 998889999999998754
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-103 Score=967.48 Aligned_cols=579 Identities=43% Similarity=0.710 Sum_probs=543.1
Q ss_pred hhHhHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 000830 39 RSVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSS 118 (1265)
Q Consensus 39 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (1265)
.+.++++++++.+| .|.++++|++++++.|+..|++.++++.++..+.... ++........+++++++++++..++.
T Consensus 648 ~~~s~~~i~k~~~p-e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~--~~~~~~~~~~~al~f~~l~~~~~i~~ 724 (1228)
T KOG0055|consen 648 EKVSFWRIFKLNKP-EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPD--DDELKREVRAWALIFLGLGIVSGITN 724 (1228)
T ss_pred ccccHHHHHHhccc-hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC--hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999987 5788899999999999999999999999998875321 12222222337788888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 119 WIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGF 198 (1265)
Q Consensus 119 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 198 (1265)
+++++++.+.++++..++|..+|+++++++.+|||...++|.+.+|+.+|...++..+.+.+..++.++..+++++++.|
T Consensus 725 ~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf 804 (1228)
T KOG0055|consen 725 FLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAF 804 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999644449999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 000830 199 ARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYG 278 (1265)
Q Consensus 199 ~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 278 (1265)
+++|+|+++++++.|++++..+...+.+.....+..+...+.+.++.|++++||||++|+.|+++.+.|.+..++..+..
T Consensus 805 ~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~ 884 (1228)
T KOG0055|consen 805 IYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSS 884 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000830 279 RKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEM 358 (1265)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~ 358 (1265)
.+.+.+.++..++.+.+.++.+++.+|||++++..|.+++..++..++.+.+..+.+++.....+.+.+|+.|+.+++++
T Consensus 885 ~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i 964 (1228)
T KOG0055|consen 885 FKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEI 964 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988888888888888899999999999999999999
Q ss_pred hccccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCc
Q 000830 359 IERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLS 438 (1265)
Q Consensus 359 l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 438 (1265)
+|++|++++..+.+...++.+|+|+|+||+|+||.+|+.++|+|+||++++||++||||||||||||++.||.|+|+|++
T Consensus 965 ~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~ 1044 (1228)
T KOG0055|consen 965 LDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDA 1044 (1228)
T ss_pred hcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 99998776544334445667899999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCC
Q 000830 439 GEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERG 518 (1265)
Q Consensus 439 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g 518 (1265)
|.|.|||+|++++++++||++||.|+|||.||++||||||+||.+.++.+|+++||+.|++|+||.+||+||||.+||+|
T Consensus 1045 G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG 1124 (1228)
T KOG0055|consen 1045 GKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERG 1124 (1228)
T ss_pred CeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCccc
Confidence 99999999999999999999999999999999999999999996668999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEE
Q 000830 519 IQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVK 598 (1265)
Q Consensus 519 ~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 598 (1265)
.+||||||||||||||++|||+||||||+|||||.++|+.+|++|++.+.|||+|+|||||+++++||.|+|++||+|+|
T Consensus 1125 ~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE 1204 (1228)
T KOG0055|consen 1125 VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVE 1204 (1228)
T ss_pred CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCcchhccCCchHHHHHHHHHH
Q 000830 599 TGSHEELISNPNSAYAALVQLQE 621 (1265)
Q Consensus 599 ~g~~~~l~~~~~~~~~~~~~~~~ 621 (1265)
+|||++|+++ ++.|.+|++.|.
T Consensus 1205 ~GtH~~L~~~-~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1205 QGTHDELLAK-RGIYFRLVQLQS 1226 (1228)
T ss_pred cccHHHHHhC-CCchHHHhhhcc
Confidence 9999999995 999999998764
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.2e-95 Score=894.18 Aligned_cols=609 Identities=29% Similarity=0.398 Sum_probs=546.2
Q ss_pred CCCCCCCCcccccCcccCCCCCCCCcchhhhhHHHhhhhhHhHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 000830 1 MSTPAVGSFPVNDYNNSSNNNNNNNTEDQESSKKQQQKRSVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFG 80 (1265)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1265)
+.||+.|....+.++..+.|++......+..+.+....++..+.+++..+.++++. +.-.++.+++..++....|+++.
T Consensus 100 v~dp~~g~~~l~~~e~~~~~tg~~l~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-l~~v~~~sl~l~i~~l~~p~~~q 178 (709)
T COG2274 100 VLDPAKGIRRLSLEEFEKLWTGIALLLAPTASRKFKDIPPFGLSWFIPLLFKYRRL-LFEVLLASLLLQLLALATPLFSQ 178 (709)
T ss_pred EEeCCCCcEEcCHHHHHHhhheeEEEEecccccccccccccchHhHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999976666655544222233334566666666655443 33334445555555555556889
Q ss_pred HHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhH
Q 000830 81 KLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGE 160 (1265)
Q Consensus 81 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~ 160 (1265)
.++|.+.... ..+.+....+.++++++...++.+++.++..+++.++..++-.++|+|++++|++||++ +++||
T Consensus 179 ~viD~Vl~~~-----~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~-r~~Ge 252 (709)
T COG2274 179 IVIDKVLPDA-----SRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEK-RSVGE 252 (709)
T ss_pred HHHHhhhccC-----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccC-CChhh
Confidence 9999876432 23444455566666777788899999999999999999999999999999999999997 59999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 161 VISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKA 240 (1265)
Q Consensus 161 l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (1265)
+++|+ +|.+.|+++++..+...+.++.++++.+++|++++|.|++++++.+|+++++..++.+.+++..++..+..++.
T Consensus 253 ~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~ 331 (709)
T COG2274 253 IISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQ 331 (709)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 69999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhH
Q 000830 241 GEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGE 320 (1265)
Q Consensus 241 ~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~ 320 (1265)
++...|++.||++||+.+.|..+..+|++...+..+...+..+.......+..++..+..++++|+|++++.+|.+|.|.
T Consensus 332 ~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~ 411 (709)
T COG2274 332 QSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQ 411 (709)
T ss_pred hhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccc
Q 000830 321 SFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIF 400 (1265)
Q Consensus 321 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l 400 (1265)
++++.+.......|+..+...+..+++++.+.+|+.++++.++|.+.... ....++..|+|+|+||+|+|+.++ .++|
T Consensus 412 LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-~~~~~~~~g~I~~~nvsf~y~~~~-~~vL 489 (709)
T COG2274 412 LVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-LIHLPKLQGEIEFENVSFRYGPDD-PPVL 489 (709)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-cccccccCceEEEEEEEEEeCCCC-cchh
Confidence 99987777777789999999999999999999999999998877543211 134456788999999999998653 4799
Q ss_pred cceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhcc
Q 000830 401 DKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILY 480 (1265)
Q Consensus 401 ~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~ 480 (1265)
+|+||+|++||++||||+||||||||+|+|+|+|+|++|+|++||.|+.++++.++|++||||+||+.||+|||+|||++
T Consensus 490 ~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l 569 (709)
T COG2274 490 EDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIAL 569 (709)
T ss_pred hceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHH
Q 000830 481 GKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQ 560 (1265)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~ 560 (1265)
+.|+.++|++++||+.+++|+||.++|.||+|.+||+|.+|||||||||+|||||+++|+||||||||||||++||+.|.
T Consensus 570 ~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~ 649 (709)
T COG2274 570 GNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIIL 649 (709)
T ss_pred CCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHHH
Q 000830 561 EALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQLQ 620 (1265)
Q Consensus 561 ~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 620 (1265)
+.|.+..+|+|+|+||||++++++||+|+||++|+|+++|+|+|+++. ++.|.++++.|
T Consensus 650 ~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 650 QNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred HHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHhcc
Confidence 999999999999999999999999999999999999999999999998 89999998754
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.9e-91 Score=859.31 Aligned_cols=562 Identities=31% Similarity=0.509 Sum_probs=509.4
Q ss_pred HHHHHhhchhhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 685 IKLYSMVRPDWTYGVCGTICAI---IAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLS 761 (1265)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 761 (1265)
.+++....++|+.+.-.++.++ +.++..|++. ..+++.... ....+......+.+++.+++..++..++.++
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~---q~viD~Vl~--~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~ 217 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFS---QIVIDKVLP--DASRSTLTVLAIGLLLAALFEALLRLLRTYL 217 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhc--cCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555566655443333333 3333444433 222222221 1122334445666777778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 762 FGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWR 841 (1265)
Q Consensus 762 ~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 841 (1265)
+...+.++...+-.++|+|+++.|++||++ +++|++++|+. |.+.+++++.......+..+.+.++.++++++++|.
T Consensus 218 ~~~~~~rld~~l~~~~~~hll~Lpl~~f~~--r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~ 294 (709)
T COG2274 218 IAHLGKRLDLELSGRFFRHLLRLPLSYFEK--RSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWK 294 (709)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcCcHHHccC--CChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999996 78999999986 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHH
Q 000830 842 ITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQ 921 (1265)
Q Consensus 842 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 921 (1265)
+++++++.+|+.++..++..+++++..++..+..+..++...|++.|++|||+.+.|+++..+|++...+..+..++...
T Consensus 295 L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~ 374 (709)
T COG2274 295 LTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEK 374 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHH
Confidence 99999999999999999999999999888888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000830 922 IAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKT 1001 (1265)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~ 1001 (1265)
...+...+..++......+++|+|+.++..+.+|.|+++++.+.......++..+...+.+++....+.+|+.++++.++
T Consensus 375 ~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~ 454 (709)
T COG2274 375 LALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPP 454 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cccCCC-CcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEEC
Q 000830 1002 QVIGDI-GEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVD 1080 (1265)
Q Consensus 1002 ~~~~~~-~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~id 1080 (1265)
|.+.+. ....++..|+|+|+||+|+|+.++ +++|+|+||+|+|||+|||||+||||||||+++|.|+|+|++|+|++|
T Consensus 455 E~~~~~~~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~d 533 (709)
T COG2274 455 EQEGDKTLIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLD 533 (709)
T ss_pred ccccccccccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 865443 234566789999999999998653 479999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChh
Q 000830 1081 GIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGG 1160 (1265)
Q Consensus 1081 G~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1160 (1265)
|+|+++++++.+|++|+|||||++||+|||||||+++.|+.++||+++||+.+++|+||.++|.||||+|||+|.+||||
T Consensus 534 g~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGG 613 (709)
T COG2274 534 GVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGG 613 (709)
T ss_pred CEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhh
Q 000830 1161 QKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSS 1240 (1265)
Q Consensus 1161 QkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~e 1240 (1265)
|||||+|||||++||+||||||||||||++||+.|.+.|.+..++||+|+||||++++++||||+||++|+|+|+|+|+|
T Consensus 614 QrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~e 693 (709)
T COG2274 614 QRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEE 693 (709)
T ss_pred HHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCcHHHHHHHHh
Q 000830 1241 LVENEDGAYFKLINLQ 1256 (1265)
Q Consensus 1241 Ll~~~~g~f~~l~~~~ 1256 (1265)
|++ .+|.|+++|+.|
T Consensus 694 ll~-~~g~y~~l~~~q 708 (709)
T COG2274 694 LLA-QGGLYARLYQQQ 708 (709)
T ss_pred HHH-hcChHHHHHhcc
Confidence 999 599999999876
No 14
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.6e-87 Score=840.02 Aligned_cols=568 Identities=21% Similarity=0.258 Sum_probs=484.3
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 42 SLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIE 121 (1265)
Q Consensus 42 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (1265)
.+++++++.+++++. ++++++++++..++.+..|++++.++|.+.... .. ...+..+...++++.++..++.++.
T Consensus 9 ~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (588)
T PRK11174 9 LTRWLKQQSKPAKRW-LNLSILLGFLSGLLLIAQAWLLATILQALIIEN---IP-REALLPPFILLILLFVLRALLAWLR 83 (588)
T ss_pred hhHHHHHHhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---Cc-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 366788888877554 566777778888888888889999999764211 01 1122223333444555667788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 122 VSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARV 201 (1265)
Q Consensus 122 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 201 (1265)
.++....+.++..++|.++|+|++++|+++|++ .++|++++|+++|++.+++++...++.++..++.+++.++++++++
T Consensus 84 ~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~-~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 162 (588)
T PRK11174 84 ERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQG-KPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPIN 162 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchhhcc-CCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999997 5899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Q 000830 202 WQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKA 281 (1265)
Q Consensus 202 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 281 (1265)
|.+++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|++..++..+...+.
T Consensus 163 ~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 242 (588)
T PRK11174 163 WAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEV 242 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888999999999999999999999999999999999999999999999999999888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHH---------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 000830 282 GLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGES---------FTTMLNVVIAGLSLGQAAPDITAFIRAKAAA 352 (1265)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~ 352 (1265)
.+..+...++..++..+..+++++++++.+. |.++.|.+ +..+.+......|+..+...+..+.+++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~ 321 (588)
T PRK11174 243 LRMAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAA 321 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776666666655555555455455555443 66676643 1111222233567888888899999999999
Q ss_pred HHHHHHhccccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHh
Q 000830 353 YPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIER 432 (1265)
Q Consensus 353 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~ 432 (1265)
+|+.++++.+++.+.. .....+....+.|+|+||+|.|++ ++++|+|+||+|+|||++|||||||||||||+++|+|
T Consensus 322 ~ri~~~l~~~~~~~~~-~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g 398 (588)
T PRK11174 322 ESLVTFLETPLAHPQQ-GEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLG 398 (588)
T ss_pred HHHHHHHcCCCcccCC-CccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 9999999865432111 110111112356999999987763 3469999999999999999999999999999999999
Q ss_pred ccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccc
Q 000830 433 FYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFET 512 (1265)
Q Consensus 433 ~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 512 (1265)
+| |++|+|.+||+|+++++.+++|++|+||||+|+||++||+|||++|+|+++++++++||+.+++++++..||+||||
T Consensus 399 ~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT 477 (588)
T PRK11174 399 FL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDT 477 (588)
T ss_pred CC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccc
Confidence 99 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEe
Q 000830 513 QVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQ 592 (1265)
Q Consensus 513 ~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~ 592 (1265)
.+||+|.+|||||||||+|||||++||+|||||||||+||+++|+.|+++|+++.+++|+|+||||+++++.||+|++|+
T Consensus 478 ~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~ 557 (588)
T PRK11174 478 PIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQ 557 (588)
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCEEEEeeCcchhccCCchHHHHHHHHHH
Q 000830 593 GRKIVKTGSHEELISNPNSAYAALVQLQE 621 (1265)
Q Consensus 593 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 621 (1265)
+|+|+|+|+|+||+++ ++.|++++..|.
T Consensus 558 ~G~i~e~G~~~eL~~~-~~~y~~l~~~q~ 585 (588)
T PRK11174 558 DGQIVQQGDYAELSQA-GGLFATLLAHRQ 585 (588)
T ss_pred CCeEeecCCHHHHHhc-chHHHHHHHHhh
Confidence 9999999999999987 789999997764
No 15
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.8e-86 Score=884.44 Aligned_cols=571 Identities=29% Similarity=0.448 Sum_probs=489.5
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 42 SLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIE 121 (1265)
Q Consensus 42 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (1265)
.+.+++++.+++++ .++++++++++.+++.|+++++++.+++.+... .........+.+++++++++.+++.+++
T Consensus 812 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~l~~~~~~i~~~~~~~l~ 886 (1466)
T PTZ00265 812 NLRIVYREIFSYKK-DVTIIALSILVAGGLYPVFALLYAKYVSTLFDF----ANLEANSNKYSLYILVIAIAMFISETLK 886 (1466)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556666655544 357778888889999999999999999976421 1111223345566667777788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchhhcc-ccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 122 VSCWMYTGERQAAKMRMAYLRSMLNQDISLFDT-EASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFAR 200 (1265)
Q Consensus 122 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~-~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 200 (1265)
.++..+.++++..++|.++|++++++|++||++ ++++|++++|+++|++.+++++...+..++..++.+++++++++++
T Consensus 887 ~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~ 966 (1466)
T PTZ00265 887 NYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYF 966 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999984 3579999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHHHHHHHhhHHHHHHhcchHH
Q 000830 201 VWQISLVTLSIVPLIALAGGMYAYVTIGLI-AR-----------------VRKSYVKAGEIAEEVIGNVRTVQAFAGEDK 262 (1265)
Q Consensus 201 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~ 262 (1265)
+|.++++++.++|++ ...+.++.+... .+ .++..++.+..++|.++|+++||+|+.|+.
T Consensus 967 ~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~ 1043 (1466)
T PTZ00265 967 CPIVAAVLTGTYFIF---MRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDY 1043 (1466)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHH
Confidence 999887765443333 333344332211 11 223456778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHH
Q 000830 263 AVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDI 342 (1265)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 342 (1265)
+.++|++..+...+...+...+.++..++..++..+..++++|+|++++..|.++.|.+++++++++....++..+...+
T Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~ 1123 (1466)
T PTZ00265 1044 FCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLK 1123 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888888888888888888888899999999999999999998887766555545677778889
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccCCC---CCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCC
Q 000830 343 TAFIRAKAAAYPIFEMIERDTMSKASSKTGRK---LDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGS 419 (1265)
Q Consensus 343 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~s 419 (1265)
..+.+++++++|++++++.+++.+.....+.. .+...+.|+|+||+|+||++++.++|+|+||+|++|+++||||||
T Consensus 1124 ~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~S 1203 (1466)
T PTZ00265 1124 GDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGET 1203 (1466)
T ss_pred HHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCC
Confidence 99999999999999999876543211111111 123457899999999998766668999999999999999999999
Q ss_pred CCcHHHHHHHHHhccCC------------------------------------------------------CcceEEECC
Q 000830 420 GSGKSTVISLIERFYEP------------------------------------------------------LSGEILLDG 445 (1265)
Q Consensus 420 GsGKSTl~~ll~~~~~~------------------------------------------------------~~G~i~~~g 445 (1265)
|||||||+++|+|+|+| ++|+|++||
T Consensus 1204 GsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG 1283 (1466)
T PTZ00265 1204 GSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDG 1283 (1466)
T ss_pred CCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECC
Confidence 99999999999999999 699999999
Q ss_pred eeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 446 NNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 446 ~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
+|+++++.+++|++||||+|||+||++||+|||+||+|+++++++++||+.+++++||..||+||||.|||+|.+|||||
T Consensus 1284 ~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQ 1363 (1466)
T PTZ00265 1284 VDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQ 1363 (1466)
T ss_pred EEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhccCEEEEEeC----CEEE-E
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRNADVIAVVQG----RKIV-K 598 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~----G~i~-~ 598 (1265)
||||||||||+++|+||||||||||||+++|+.|+++|.++. +++|+|+||||++++++||+|+||++ |+++ |
T Consensus 1364 kQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e 1443 (1466)
T PTZ00265 1364 KQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQA 1443 (1466)
T ss_pred HHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEE
Confidence 999999999999999999999999999999999999999884 69999999999999999999999999 9955 8
Q ss_pred eeCcchhccCCchHHHHHHHHH
Q 000830 599 TGSHEELISNPNSAYAALVQLQ 620 (1265)
Q Consensus 599 ~g~~~~l~~~~~~~~~~~~~~~ 620 (1265)
+|+|+||+++.++.|+++++.|
T Consensus 1444 ~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1444 HGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred ecCHHHHHhcCCChHHHHHhhc
Confidence 9999999974479999998765
No 16
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=5.7e-86 Score=822.85 Aligned_cols=562 Identities=35% Similarity=0.525 Sum_probs=502.0
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 43 LFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEV 122 (1265)
Q Consensus 43 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1265)
+++++.+.+ .+ .+.++.++.++..++....|.+++.++|.+... ......+..+++++.++..++.++..
T Consensus 4 ~~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~ 73 (567)
T COG1132 4 LRRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD-------LGELLELLLLLLLLALLGGVLRALQS 73 (567)
T ss_pred HHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555554 34 456666677777777777777889999876511 12223334444555556677788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 123 SCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVW 202 (1265)
Q Consensus 123 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 202 (1265)
++..+.+.++..++|.++|++++++|+++|++ .++|++++|+++|++.++..+......+...+..+++.+++++..+|
T Consensus 74 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~-~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (567)
T COG1132 74 YLGSRLGQKIVADLRRDLFEKLLRLPLSFFDK-AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSW 152 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHhCc-CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhH
Confidence 88888889999999999999999999999998 58899999999999999999998866666678889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000830 203 QISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAG 282 (1265)
Q Consensus 203 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 282 (1265)
.+++++++..|++.+...++.++.++..++.++..++.++.+.|.++|+++||+|+.++.+.+++++..++..+...+..
T Consensus 153 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (567)
T COG1132 153 RLALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRAS 232 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998899888899999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccc
Q 000830 283 LAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERD 362 (1265)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 362 (1265)
...+...++..++..+...+++++|.+.+..+.++.|.+.+++.+......|+..+...+..+..+..+++|++++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~ 312 (567)
T COG1132 233 RLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEE 312 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888888888888888999999999999999999999888888888778899999999999999999999999999876
Q ss_pred cccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEE
Q 000830 363 TMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEIL 442 (1265)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 442 (1265)
++..+... ......+.|+|+||+|+|++ ++++|+|+||+++|||++||||||||||||++++|+|+|+|++|+|+
T Consensus 313 ~~~~~~~~---~~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~ 387 (567)
T COG1132 313 PEVEDPPD---PLKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEIL 387 (567)
T ss_pred ccccCCCC---CCCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEE
Confidence 54332111 12334567999999999974 35699999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCC
Q 000830 443 LDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLS 522 (1265)
Q Consensus 443 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 522 (1265)
+||+|+++++.+++|++|++|||||+||++||+|||.+|+|+++++|+++||+.++++|||+++|+||||.+||+|.+||
T Consensus 388 idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LS 467 (567)
T COG1132 388 IDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLS 467 (567)
T ss_pred ECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCc
Q 000830 523 GGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSH 602 (1265)
Q Consensus 523 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 602 (1265)
||||||||||||+++||||||||||||+||++||+.|++++.++.++||+|+||||++++++||+|+||++|+|+|.|+|
T Consensus 468 gGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h 547 (567)
T COG1132 468 GGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTH 547 (567)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred chhccCCchHHHHHHHHHH
Q 000830 603 EELISNPNSAYAALVQLQE 621 (1265)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~~ 621 (1265)
+||+++ ++.|+++++.|.
T Consensus 548 ~eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 548 EELLAK-GGLYARLYQAQG 565 (567)
T ss_pred HHHHHc-CCHHHHHHHHhh
Confidence 999998 999999998774
No 17
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.5e-85 Score=818.93 Aligned_cols=560 Identities=34% Similarity=0.541 Sum_probs=489.7
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 687 LYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMG 766 (1265)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 766 (1265)
++.+.+ ++ .+..+.++.++...........+...++... ........+...++++.++..++.+...+...+.+
T Consensus 7 l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 80 (567)
T COG1132 7 LLKYLK-YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALL----ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLG 80 (567)
T ss_pred HHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444 55 5555555555554444444455555555443 11122333445555556677778888888888888
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 767 ERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVV 846 (1265)
Q Consensus 767 ~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~ 846 (1265)
.+...++|.++++++++.|++||++ +++|++++|+++|++.++..+......+...+..+++.+++++..+|.+++++
T Consensus 81 ~~~~~~lr~~~~~~l~~~~~~~~~~--~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 158 (567)
T COG1132 81 QKIVADLRRDLFEKLLRLPLSFFDK--AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALIL 158 (567)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHhCc--CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999997 78999999999999999999999866666678888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000830 847 VATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIF 926 (1265)
Q Consensus 847 l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (1265)
+...|++.+......+..+...+..++...+..+.+.|.++|+++||+|+.++...+++.+..+...+...+.....+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (567)
T COG1132 159 LLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALL 238 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888887777766677777788888899999999999999999999999999999888888888877777777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 000830 927 YGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGD 1006 (1265)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~ 1006 (1265)
..+..++........+++|..++..+.++.+.+...+.+......++..+......+..+..+++|++++++.+++....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~ 318 (567)
T COG1132 239 APLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDP 318 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Confidence 78888889999999999999999999999999888888888888889999999999999999999999999986653322
Q ss_pred CCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCC
Q 000830 1007 IGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKR 1086 (1265)
Q Consensus 1007 ~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~ 1086 (1265)
... .....|.|+|+||+|+|++ ++++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|+|||+||++
T Consensus 319 ~~~-~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~ 395 (567)
T COG1132 319 PDP-LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRD 395 (567)
T ss_pred CCC-CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhh
Confidence 111 2344678999999999984 3579999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000830 1087 LNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1087 ~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrla 1166 (1265)
+++++||++|++|||||+||+|||+|||++|+++++|||+++||+.++++|||.++|+||||.|||+|.+||||||||||
T Consensus 396 i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrla 475 (567)
T COG1132 396 ISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLA 475 (567)
T ss_pred cCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCC
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENED 1246 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1246 (1265)
||||++++|||||||||||+||++||+.|++++++..++||+|+||||++|+++||+|+|||+|+|+|.|+|+||++ .+
T Consensus 476 iARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~-~~ 554 (567)
T COG1132 476 IARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLA-KG 554 (567)
T ss_pred HHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHH-cC
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999 59
Q ss_pred cHHHHHHHHhhc
Q 000830 1247 GAYFKLINLQQR 1258 (1265)
Q Consensus 1247 g~f~~l~~~~~~ 1258 (1265)
|.|++||+.|..
T Consensus 555 g~y~~l~~~~~~ 566 (567)
T COG1132 555 GLYARLYQAQGG 566 (567)
T ss_pred CHHHHHHHHhhc
Confidence 999999998753
No 18
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=7.7e-86 Score=841.72 Aligned_cols=605 Identities=24% Similarity=0.316 Sum_probs=523.3
Q ss_pred CCCC--CCCCcccccCcccCCCCCCCCcchhhhhHHHhhhhhHhHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHH
Q 000830 1 MSTP--AVGSFPVNDYNNSSNNNNNNNTEDQESSKKQQQKRSVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIF 78 (1265)
Q Consensus 1 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (1265)
+.|| +.|-..++.++....|++......+..+.++.+.+...+++++++.+++++. +...++++++..++....|++
T Consensus 100 i~dP~~~~g~~~~~~~ef~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~p~~ 178 (708)
T TIGR01193 100 IADPDPTVGITKISKEDFYEEWTGIAIFISPTPEYKPIKEKENSLLKFIPLITRQKKL-IVNIVIAAIIVTLISIAGSYY 178 (708)
T ss_pred EEcCCcccCCEEecHHHHHhhCCCEEEEEEecccccccccccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 4699 8898788889999999987666665544443322335567777777665443 345555566666666777778
Q ss_pred HHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccCh
Q 000830 79 FGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEAST 158 (1265)
Q Consensus 79 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~ 158 (1265)
++.++|.+.... ....+..+...++++.++..++.+++.++..+.+.++..++|.++|+|++++|+++|++ .++
T Consensus 179 ~~~iiD~v~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~-~~~ 252 (708)
T TIGR01193 179 LQKIIDTYIPHK-----MMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRLSIDIILSYIKHLFELPMSFFST-RRT 252 (708)
T ss_pred HHHHHHHhhccC-----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-Cch
Confidence 999999865321 11222333333444555667788888899999999999999999999999999999997 589
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 159 GEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYV 238 (1265)
Q Consensus 159 G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (1265)
|++++|++ |++.+++++...+...+.++..+++.++++++++|.+++++++.+|+++++..++.++.++..++.++..+
T Consensus 253 G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (708)
T TIGR01193 253 GEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANA 331 (708)
T ss_pred hHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997 99999999988888888888888888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 000830 239 KAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNG 318 (1265)
Q Consensus 239 ~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 318 (1265)
+.++.+.|.++|+++||+|+.|+.+.++|++...+..+...+.....+....+..++..+..++++++|++++.+|.+|.
T Consensus 332 ~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~ 411 (708)
T TIGR01193 332 VLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTL 411 (708)
T ss_pred HHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 99999999999999999999999999999999998888888888777777666666666777888899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCcccEEEEeEEEECCCCCCCc
Q 000830 319 GESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVA 398 (1265)
Q Consensus 319 g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~ 398 (1265)
|.++++..+......|+..+...+..+++++.+.+|+.++++.+++.+... .....+...+.|+|+||+|+|++ +++
T Consensus 412 G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~-~~~~~~~~~~~I~~~~vsf~y~~--~~~ 488 (708)
T TIGR01193 412 GQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKK-KRTELNNLNGDIVINDVSYSYGY--GSN 488 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc-cccCCCCCCCcEEEEEEEEEcCC--CCc
Confidence 999998877777778999999999999999999999999998665432211 10112334568999999999973 346
Q ss_pred cccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHh
Q 000830 399 IFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENI 478 (1265)
Q Consensus 399 ~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni 478 (1265)
+|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|+||||+|+||++||+|||
T Consensus 489 iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi 568 (708)
T TIGR01193 489 ILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENL 568 (708)
T ss_pred ceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHH
Q 000830 479 LYG-KDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEN 557 (1265)
Q Consensus 479 ~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~ 557 (1265)
.++ .++++++++.++|+.+++++++..+|+||||.+||+|.+|||||||||+||||++++|+|||||||||+||+++|+
T Consensus 569 ~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~ 648 (708)
T TIGR01193 569 LLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEK 648 (708)
T ss_pred hccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHH
Confidence 999 5788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHH
Q 000830 558 SVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQ 618 (1265)
Q Consensus 558 ~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 618 (1265)
.+.+.|+++ +++|+|+||||+++++.||+|++|++|++++.|+|+||+++ ++.|+++++
T Consensus 649 ~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 649 KIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDR-NGFYASLIH 707 (708)
T ss_pred HHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhc-CCcHHHHhh
Confidence 999999885 68999999999999999999999999999999999999987 788988864
No 19
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.4e-85 Score=832.92 Aligned_cols=598 Identities=25% Similarity=0.284 Sum_probs=511.0
Q ss_pred CCCCCCCCc-ccccCcccCCCCCCCCcchhhhhHHHhhhhhHhHHHHHHh-hchhhHHHHHHHHHHHHHHHhhHHHHHHH
Q 000830 1 MSTPAVGSF-PVNDYNNSSNNNNNNNTEDQESSKKQQQKRSVSLFKLFAF-ADFYDYILMSLGSIGACVHGVSVPVFFIF 78 (1265)
Q Consensus 1 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (1265)
+.||+.|.. ..+.++.+.. ++......+. .+ .+...+++++++ .++.+ ..+...++++++..++....|++
T Consensus 86 i~dP~~g~~~~~~~~e~~~~-~g~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~p~~ 158 (686)
T TIGR03797 86 IFDPATGTRRRVDAAMAATL-APEAYMFYRP--LP---DKALGLRDLLRFALRGAR-RDLLAILAMGLLGTLLGMLVPIA 158 (686)
T ss_pred EECCCCCCCcccCHHHHHhc-CCEEEEEecC--Cc---cccccHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 479999976 5666655444 3323333222 11 111335555555 33333 33445555666666666677778
Q ss_pred HHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccCh
Q 000830 79 FGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEAST 158 (1265)
Q Consensus 79 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~ 158 (1265)
++.++|.+.... . ...+..+.+.++++.++..++.+++.++....+.++..++|.++|+|++++|++||++ .++
T Consensus 159 ~~~iid~v~~~~----~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~-~~~ 232 (686)
T TIGR03797 159 TGILIGTAIPDA----D-RSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQ-YST 232 (686)
T ss_pred HHHHHHHhhhcC----C-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCC-CCh
Confidence 999999865321 1 1223333444455556667888888899999999999999999999999999999997 589
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 159 GEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYV 238 (1265)
Q Consensus 159 G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (1265)
|++++|++ |++.+++++...+...+..+...++.++++++++|.+++++++.+|+.+++..++.+..++..++.++..+
T Consensus 233 g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (686)
T TIGR03797 233 GDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSG 311 (686)
T ss_pred hHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997 89999999998888888888888888899999999999999999999888888899999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 000830 239 KAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNG 318 (1265)
Q Consensus 239 ~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 318 (1265)
+.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+..+....+..++..+..++++++|++++.+|.++.
T Consensus 312 ~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~lti 391 (686)
T TIGR03797 312 KISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSL 391 (686)
T ss_pred HHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 99999999999999999999999999999999999999999888888887777777777788888999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCcccEEEEeEEEECCCCCCCc
Q 000830 319 GESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVA 398 (1265)
Q Consensus 319 g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~ 398 (1265)
|.++++..+......|+..+...+..+++++.+.+|+.++++.+++.+. .........+.|+|+||+|+|++. +++
T Consensus 392 G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~---~~~~~~~~~~~I~~~nvsf~Y~~~-~~~ 467 (686)
T TIGR03797 392 GSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDE---AKTDPGKLSGAIEVDRVTFRYRPD-GPL 467 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc---CcCCCCCCCceEEEEEEEEEcCCC-Ccc
Confidence 9999888777777788999999999999999999999999976554321 111122345679999999999743 357
Q ss_pred cccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHh
Q 000830 399 IFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENI 478 (1265)
Q Consensus 399 ~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni 478 (1265)
+|+|+||+|+|||++|||||||||||||+|+|+|+|+|++|+|++||+|+++++++++|++|+||||||++|++||+|||
T Consensus 468 vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi 547 (686)
T TIGR03797 468 ILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENI 547 (686)
T ss_pred ceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHH
Q 000830 479 LYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENS 558 (1265)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~ 558 (1265)
++++| .++++++++|+.+++++++..+|+|+||.+||+|.+|||||||||+|||||+++|+|||||||||+||+++|+.
T Consensus 548 ~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~ 626 (686)
T TIGR03797 548 AGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAI 626 (686)
T ss_pred hcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHH
Confidence 99998 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHHH
Q 000830 559 VQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQLQ 620 (1265)
Q Consensus 559 i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 620 (1265)
+.+.|+++ ++|+|+||||+++++.||+|++|++|+|++.|+|+||+++ ++.|++++..|
T Consensus 627 i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l~~~q 685 (686)
T TIGR03797 627 VSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQLARRQ 685 (686)
T ss_pred HHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHHHHhc
Confidence 99999886 6899999999999999999999999999999999999987 79999988643
No 20
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.4e-85 Score=840.35 Aligned_cols=605 Identities=23% Similarity=0.283 Sum_probs=521.6
Q ss_pred CCCCCCCCcccccCcccCCCCCCCCcchhhhhHHHhhhhhHhHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 000830 1 MSTPAVGSFPVNDYNNSSNNNNNNNTEDQESSKKQQQKRSVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFG 80 (1265)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1265)
+.||+.|-..++.++..+.|++......+..+.++.+.....+++++++.+++++. +...++++++..++....|++++
T Consensus 100 i~dP~~g~~~~~~~e~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~p~~~~ 178 (710)
T TIGR03796 100 LNDPALGPRTVSLEEFDESFTGVVLTFEPGPEFQKGGRKPSLLRALWRRLRGSRGA-LLYLLLAGLLLVLPGLVIPAFSQ 178 (710)
T ss_pred EECCCCCCEEccHHHHHhhCCCeEEEEEECccccccCcCcccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999998888888888899886666655544433322224456666666655433 34445555555556666677889
Q ss_pred HHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhH
Q 000830 81 KLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGE 160 (1265)
Q Consensus 81 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~ 160 (1265)
.++|.+.... . ...+..+...++++.++..++.+++.++....+.++..++|.++|+|++++|+++|++ .++|+
T Consensus 179 ~iid~v~~~~----~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~-~~~g~ 252 (710)
T TIGR03796 179 IFVDEILVQG----R-QDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQ-RHAGD 252 (710)
T ss_pred HHHHHHhhcC----C-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC-CcccH
Confidence 9999765321 1 1122223333444455667788888999999999999999999999999999999997 58999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 161 VISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKA 240 (1265)
Q Consensus 161 l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (1265)
+++|+++| +.+++++...+..++.+++.+++.++++++++|.+++++++.+|+.+++..++.++.++..++.++..++.
T Consensus 253 ~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (710)
T TIGR03796 253 IASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKL 331 (710)
T ss_pred HHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988 78999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhH
Q 000830 241 GEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGE 320 (1265)
Q Consensus 241 ~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~ 320 (1265)
++.+.|.++|+++||++++|+.+.++|++...+..+...+..+..+....+..++..+..++++++|++++.+|.++.|.
T Consensus 332 ~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~ 411 (710)
T TIGR03796 332 TGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGM 411 (710)
T ss_pred HHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999999999999999999999999999999888888888887777777777788888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccc---c-CCCC-CCCcccEEEEeEEEECCCCC
Q 000830 321 SFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSK---T-GRKL-DKLSGHIEFKDVSFCYPSRP 395 (1265)
Q Consensus 321 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~---~-~~~~-~~~~~~i~~~~v~f~y~~~~ 395 (1265)
++++..+......|+..+...+..++++..+.+|+.++++.+++.+.... . .... +...+.|+++||+|+|++.
T Consensus 412 lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~- 490 (710)
T TIGR03796 412 LVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL- 490 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCCC-
Confidence 99888777777789999999999999999999999999987654322110 0 0111 2335689999999999853
Q ss_pred CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHH
Q 000830 396 DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIR 475 (1265)
Q Consensus 396 ~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~ 475 (1265)
++++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||+|++|++||+
T Consensus 491 ~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~ 570 (710)
T TIGR03796 491 EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVR 570 (710)
T ss_pred CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHH
Confidence 35699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHH
Q 000830 476 ENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAES 555 (1265)
Q Consensus 476 ~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~ 555 (1265)
|||.++.|+.++++++++|+.+++++++.++|+|+||.+||+|.+|||||||||+|||||+++|+|||||||||+||+++
T Consensus 571 eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~t 650 (710)
T TIGR03796 571 DNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPET 650 (710)
T ss_pred HHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHH
Confidence 99999988899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHH
Q 000830 556 ENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALV 617 (1265)
Q Consensus 556 ~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 617 (1265)
|+.+.+.|++ .++|+|+||||+++++.||+|++|++|+|++.|+|+||+++ ++.|++++
T Consensus 651 e~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 651 EKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred HHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHHc-CCcHHHHh
Confidence 9999999986 58999999999999999999999999999999999999987 78898876
No 21
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.6e-85 Score=830.99 Aligned_cols=566 Identities=34% Similarity=0.498 Sum_probs=497.7
Q ss_pred hhHhHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 000830 39 RSVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSS 118 (1265)
Q Consensus 39 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (1265)
....+++++++.++.+ ..+++++++.++..++....|++++.++|.+.... . ...+......++++.++..++.
T Consensus 145 ~~~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~ 218 (711)
T TIGR00958 145 TADLLFRLLGLSGRDW-PWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDK----G-PPALASAIFFMCLLSIASSVSA 218 (711)
T ss_pred hhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----C-HHHHHHHHHHHHHHHHHHHHHH
Confidence 3345778888887654 44566677777777788888889999999875321 1 1122222333444455566778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 119 WIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGF 198 (1265)
Q Consensus 119 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 198 (1265)
+++.++..+.+.++..++|.++|++++++|+++|++ .++|++++|+++|++.+++.+...+..++..+..+++.+++++
T Consensus 219 ~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~-~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~ 297 (711)
T TIGR00958 219 GLRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDE-NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFML 297 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888899999999999999999999999999997 5899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 000830 199 ARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYG 278 (1265)
Q Consensus 199 ~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 278 (1265)
.++|.++++.++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|++..++..+..
T Consensus 298 ~~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 377 (711)
T TIGR00958 298 WLSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLN 377 (711)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000830 279 RKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEM 358 (1265)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~ 358 (1265)
.+.....+....+..++..+..++++++|++++.+|.++.|.+++++.+......++..+...+..+++++.+.+|++++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~ 457 (711)
T TIGR00958 378 KRKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEY 457 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777766666555666666677788899999999999999999988888888889999999999999999999999999
Q ss_pred hccccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCc
Q 000830 359 IERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLS 438 (1265)
Q Consensus 359 l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 438 (1265)
++.+++.+.. ....+.+..+.|+|+||+|+||+++++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++
T Consensus 458 l~~~~~~~~~--~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~ 535 (711)
T TIGR00958 458 LDRKPNIPLT--GTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTG 535 (711)
T ss_pred hCCCCCCCCC--CCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCC
Confidence 9876543221 11122234567999999999986555679999999999999999999999999999999999999999
Q ss_pred ceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCC
Q 000830 439 GEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERG 518 (1265)
Q Consensus 439 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g 518 (1265)
|+|.+||+|+++++.+++|++|+||+|||++|++||+|||.+|.++.+++++.++++.+++++++.++|+|+||.+||+|
T Consensus 536 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 615 (711)
T TIGR00958 536 GQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKG 615 (711)
T ss_pred CEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEE
Q 000830 519 IQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVK 598 (1265)
Q Consensus 519 ~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 598 (1265)
.+|||||||||+||||++++|+|||||||||+||+++|+.+++ . ...+++|+|+||||+++++.||+|++|++|+|+|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~-~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive 693 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-S-RSRASRTVLLIAHRLSTVERADQILVLKKGSVVE 693 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-h-hccCCCeEEEEeccHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998 3 3346899999999999999999999999999999
Q ss_pred eeCcchhccCCchHHHHH
Q 000830 599 TGSHEELISNPNSAYAAL 616 (1265)
Q Consensus 599 ~g~~~~l~~~~~~~~~~~ 616 (1265)
+|+|+||+++ ++.|+++
T Consensus 694 ~Gt~~eL~~~-~~~y~~l 710 (711)
T TIGR00958 694 MGTHKQLMED-QGCYKHL 710 (711)
T ss_pred eeCHHHHHhC-CCchHhc
Confidence 9999999987 6788765
No 22
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.5e-85 Score=817.70 Aligned_cols=566 Identities=22% Similarity=0.289 Sum_probs=476.5
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 685 IKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGI 764 (1265)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 764 (1265)
.+++.+.+++++.+..++++.++..+..+..++.+...++........ ......+..+++++.++..++.+++.++...
T Consensus 11 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK11174 11 RWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP-REALLPPFILLILLFVLRALLAWLRERVGFK 89 (588)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888888888888888777777777777777766644311111 1122233444555566677788888899999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 765 MGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITL 844 (1265)
Q Consensus 765 ~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~l 844 (1265)
.+.+...++|.++|+++++.|.+||++ +++|++++|+++|++.+++.+...+..++..++.++++++++++++|.+++
T Consensus 90 ~~~~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 167 (588)
T PRK11174 90 AGQHIRQQIRQQVLDKLQQLGPAWIQG--KPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGL 167 (588)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhhcc--CCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999996 889999999999999999999999999999988888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000830 845 VVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAG 924 (1265)
Q Consensus 845 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (1265)
++++.+|+.++......+..+...++.++...+..+.+.|.++|+++||+|++|+++.+++.+..++..+...+..+...
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (588)
T PRK11174 168 ILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAF 247 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888777777777777777778888888999999999999999999999999999999888887777766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 925 IFYGISQFFIFSSYGLALWYGSVLMGKELASFKSV---------MKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFE 995 (1265)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~ 995 (1265)
....+..++..+...+..++++..+ .+.+++|.+ +.+..+......++..+......+..+..+.+|+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 248 LSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666655555554444444444333 255555543 111122333456777788888899999999999999
Q ss_pred HhcccccccCCCCcccC-CCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCC
Q 000830 996 VLDRKTQVIGDIGEELT-NVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTA 1074 (1265)
Q Consensus 996 ~~~~~~~~~~~~~~~~~-~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~ 1074 (1265)
+++.+++.........+ +..+.|+|+||+|.|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+| |++
T Consensus 327 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 327 FLETPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred HHcCCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 99876532211111111 23457999999998863 356999999999999999999999999999999999999 999
Q ss_pred cEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCC
Q 000830 1075 GKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERG 1154 (1265)
Q Consensus 1075 G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G 1154 (1265)
|+|++||+|+++++.+++|++|+||||||+||+|||||||.+|+|+++|+|+++|++.++++++|+++|+||||.|||+|
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEE
Q 000830 1155 VQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIE 1234 (1265)
Q Consensus 1155 ~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive 1234 (1265)
.+||||||||||||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e 563 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQ 563 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEee
Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred ecChhhhhhcCCcHHHHHHHHhhc
Q 000830 1235 QGTHSSLVENEDGAYFKLINLQQR 1258 (1265)
Q Consensus 1235 ~Gt~~eLl~~~~g~f~~l~~~~~~ 1258 (1265)
.|+|+||++ .+|.|+++++.|.+
T Consensus 564 ~G~~~eL~~-~~~~y~~l~~~q~~ 586 (588)
T PRK11174 564 QGDYAELSQ-AGGLFATLLAHRQE 586 (588)
T ss_pred cCCHHHHHh-cchHHHHHHHHhhc
Confidence 999999998 68999999988754
No 23
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.6e-84 Score=823.13 Aligned_cols=564 Identities=33% Similarity=0.515 Sum_probs=496.1
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 683 SAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSF 762 (1265)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 762 (1265)
..++++++.+++|+++..++++.++........++...+.++....... ........++++++.++..++..++.+++
T Consensus 148 ~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 225 (711)
T TIGR00958 148 LLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKG--PPALASAIFFMCLLSIASSVSAGLRGGSF 225 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888888888777777777666666666666666665432111 11122233445555566777888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 763 GIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRI 842 (1265)
Q Consensus 763 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 842 (1265)
.+.+.++..++|.++|++++++|++||++ +++|++++|+++|++.+++.+...+..++..+..+++++++++.++|.+
T Consensus 226 ~~~~~~~~~~lr~~l~~~ll~~~~~~f~~--~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l 303 (711)
T TIGR00958 226 NYTMARINLRIREDLFRSLLRQDLGFFDE--NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRL 303 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999996 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000830 843 TLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQI 922 (1265)
Q Consensus 843 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1265)
++++++..|+.++......+..++..++.++...+.++.+.|+++|+++||+|+.|+++.++|.+..++..+...+....
T Consensus 304 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 383 (711)
T TIGR00958 304 TMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALA 383 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998988888777777777777788888888899999999999999999999999999999999988887777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000830 923 AGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQ 1002 (1265)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~ 1002 (1265)
......+..++......+.+++|.+++..+.++.+.++....+......++..+.....++..+..+.+|++++++.+++
T Consensus 384 ~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~ 463 (711)
T TIGR00958 384 YAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPN 463 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 66666667777777778888999999999999999999888888888889999999999999999999999999987665
Q ss_pred ccCCCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCc
Q 000830 1003 VIGDIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGI 1082 (1265)
Q Consensus 1003 ~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~ 1082 (1265)
........+++..|.|+|+||+|+||++++.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+
T Consensus 464 ~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~ 543 (711)
T TIGR00958 464 IPLTGTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGV 543 (711)
T ss_pred CCCCCCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCE
Confidence 43221112223467899999999998766668999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1083 DIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1083 di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
|+++++.+++|++|+||||||++|+|||||||.+|.++.+|+++++|++.++++++++++|+||||.+||+|.+||||||
T Consensus 544 ~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQk 623 (711)
T TIGR00958 544 PLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQK 623 (711)
T ss_pred EHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
||||||||++++|+|||||||||+||++||+.+++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+||+
T Consensus 624 QRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~ 701 (711)
T TIGR00958 624 QRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLM 701 (711)
T ss_pred HHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHH
Confidence 99999999999999999999999999999999999 3345789999999999999999999999999999999999999
Q ss_pred hcCCcHHHHHH
Q 000830 1243 ENEDGAYFKLI 1253 (1265)
Q Consensus 1243 ~~~~g~f~~l~ 1253 (1265)
+ .+|.|++|+
T Consensus 702 ~-~~~~y~~lv 711 (711)
T TIGR00958 702 E-DQGCYKHLV 711 (711)
T ss_pred h-CCCchHhcC
Confidence 8 688999874
No 24
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.2e-84 Score=828.89 Aligned_cols=597 Identities=24% Similarity=0.307 Sum_probs=511.5
Q ss_pred CCCCCCC--CcccccCcccCCCCCCCCcchhhhhHHHhh-h--hhHhHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHH
Q 000830 1 MSTPAVG--SFPVNDYNNSSNNNNNNNTEDQESSKKQQQ-K--RSVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVF 75 (1265)
Q Consensus 1 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (1265)
+.||+.| -...+..+..+.|++......+....++.+ + ....+++++++.+++++ .+...++++++..++....
T Consensus 88 i~DP~~g~~~~~~~~~e~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~ 166 (694)
T TIGR03375 88 VLLPETGDGEQELSLDALEALYSGYAIFVRPQFRFDARADELISPRPKHWFWSTLKESWP-LYRDVLIASLLINLLALAS 166 (694)
T ss_pred EEccCCCCCceEecHHHHHhhcCCeEEEEecccccccccccccccccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 4699999 666777777777777544443332222111 1 12345666666665543 3345555666666667777
Q ss_pred HHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccc
Q 000830 76 FIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTE 155 (1265)
Q Consensus 76 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~ 155 (1265)
|++++.++|.+.... . ...+..+.+.++++.++..++.+++.++..+.+.++..++|.++|+|++++|+++ ++
T Consensus 167 p~~~~~iiD~~~~~~----~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~- 239 (694)
T TIGR03375 167 PLFVMNVYDRVVPNQ----A-FETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKADLILSAKLFERVLGLRMEA-RP- 239 (694)
T ss_pred HHHHHHHHHHhhhcC----c-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CC-
Confidence 778999999765321 1 1222223333444455567788889999999999999999999999999999998 55
Q ss_pred cChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 156 ASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRK 235 (1265)
Q Consensus 156 ~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (1265)
.++|++++|+ +|++.+++++...+...+.++..+++.++++++++|.++++.++.+|+++++..++.++.++..++.++
T Consensus 240 ~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 318 (694)
T TIGR03375 240 ASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMR 318 (694)
T ss_pred CChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999 799999999998888888888888888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000830 236 SYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHI 315 (1265)
Q Consensus 236 ~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 315 (1265)
..++..+.+.|+++|+++||+|++|+.+.++|++..++..+...+..+..+....+..++..+..++++++|++++.+|.
T Consensus 319 ~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ 398 (694)
T TIGR03375 319 ESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGE 398 (694)
T ss_pred HHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999998888888877777777888888999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCcccEEEEeEEEECCCCC
Q 000830 316 SNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRP 395 (1265)
Q Consensus 316 ~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~ 395 (1265)
++.|.+++++.+......|+..+...+..+..++.+.+|+.++++.+++.+.. ..........+.|+|+||+|+|++.
T Consensus 399 ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~-~~~~~~~~~~~~I~~~~vsf~Y~~~- 476 (694)
T TIGR03375 399 LTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEG-TRFLHRPRLQGEIEFRNVSFAYPGQ- 476 (694)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CCCCCCCCccceEEEEEEEEEeCCC-
Confidence 99999999887777777899999999999999999999999999876543221 1111122345679999999999743
Q ss_pred CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHH
Q 000830 396 DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIR 475 (1265)
Q Consensus 396 ~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~ 475 (1265)
++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||+|++|++||+
T Consensus 477 ~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~ 556 (694)
T TIGR03375 477 ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLR 556 (694)
T ss_pred CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHH
Confidence 35699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHH
Q 000830 476 ENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAES 555 (1265)
Q Consensus 476 ~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~ 555 (1265)
|||.+++|++++++++++++.+++++++..+|+|+||.+||+|.+|||||||||+||||++++|+|||||||||+||+++
T Consensus 557 eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~t 636 (694)
T TIGR03375 557 DNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRS 636 (694)
T ss_pred HHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHH
Confidence 99999999899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 556 ENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 556 ~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|+.+++.|.++.+++|+|+||||+++++.||+|++|++|+++|.|+|+||+++
T Consensus 637 e~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 637 EERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 99999999998889999999999999999999999999999999999999864
No 25
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.4e-83 Score=791.75 Aligned_cols=567 Identities=22% Similarity=0.278 Sum_probs=485.7
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 43 LFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEV 122 (1265)
Q Consensus 43 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1265)
+++++++.+++++ .++++++++++..++....|.+++.++|................ .....+++++++..++.++..
T Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 81 (574)
T PRK11160 4 LLPFLKLYKRHWF-MLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYM-LPAAGVRGAAIGRTAGRYGER 81 (574)
T ss_pred hHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHH-hHHHHHHHHHHHHHHHHHHHH
Confidence 4456666666544 34566667777666777777789999986532110000000111 112223344556677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 123 SCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVW 202 (1265)
Q Consensus 123 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 202 (1265)
++.+..+.++..++|.++|+|++++|+.+|++ .++|++++|+++|++.+++++...++.++..++.+++.++++++++|
T Consensus 82 ~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~-~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (574)
T PRK11160 82 LVSHDATFRVLTHLRVFTFSKLLPLSPAGLAR-YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDL 160 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChHhhcc-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999997 58999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Q 000830 203 QISLVTLSIVPLIALA-GGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKA 281 (1265)
Q Consensus 203 ~l~l~~l~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 281 (1265)
.+++++++++|+++++ ..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+.
T Consensus 161 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (574)
T PRK11160 161 TLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQ 240 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888876653 466778888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Q 000830 282 GLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVI-AGLSLGQAAPDITAFIRAKAAAYPIFEMIE 360 (1265)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~ 360 (1265)
.+..+...++..++..+..++++++|++++ +|.++.|.+++++.+... ...++..+...+..++++.++++|+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~ 319 (574)
T PRK11160 241 ANLTGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITE 319 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 988888888777777777777888898884 788899988776554433 334666677788899999999999999998
Q ss_pred cccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcce
Q 000830 361 RDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGE 440 (1265)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 440 (1265)
.+++.+... . .......+.|+|+||+|+|+++ ++++|+|+||+++|||++|||||||||||||+++|+|+|+|++|+
T Consensus 320 ~~~~~~~~~-~-~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~ 396 (574)
T PRK11160 320 QKPEVTFPT-T-STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGE 396 (574)
T ss_pred CCCCCCCCc-c-cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 765432111 1 1112234679999999999753 246999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCC
Q 000830 441 ILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQ 520 (1265)
Q Consensus 441 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 520 (1265)
|.+||+|+++++.+++|++|+||||||++|++||+|||+++.|+.+++++.++++.+++++++.. |+||||.+||+|.+
T Consensus 397 I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~ 475 (574)
T PRK11160 397 ILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQ 475 (574)
T ss_pred EEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCC
Confidence 99999999999999999999999999999999999999999998999999999999999999999 99999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEee
Q 000830 521 LSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 521 LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 600 (1265)
|||||||||+||||++++|+|||||||||+||+++|+.+++.|.++.+++|+|+||||+++++.||+|++|++|++++.|
T Consensus 476 LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g 555 (574)
T PRK11160 476 LSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQG 555 (574)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred CcchhccCCchHHHHHHH
Q 000830 601 SHEELISNPNSAYAALVQ 618 (1265)
Q Consensus 601 ~~~~l~~~~~~~~~~~~~ 618 (1265)
+|+||+++ ++.|+++++
T Consensus 556 ~~~~l~~~-~g~y~~l~~ 572 (574)
T PRK11160 556 THQELLAQ-QGRYYQLKQ 572 (574)
T ss_pred CHHHHHhc-CcHHHHHHh
Confidence 99999987 899999875
No 26
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-82 Score=733.62 Aligned_cols=551 Identities=25% Similarity=0.337 Sum_probs=488.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 61 GSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAY 140 (1265)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~ 140 (1265)
..+++.+.++......+++..+++.+.... ....+..+...+++..++..++.|.+.......+.++..++|..+
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~-----~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~ 79 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQ-----LFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLV 79 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566666666667777777655321 123334445555666777888899999888999999999999999
Q ss_pred HHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 141 LRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGG 220 (1265)
Q Consensus 141 ~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~ 220 (1265)
++++.++++.+-.+ .++|+..+.++..++.++.+++..+|+++...+..+..++.+++++|.-++++++.+|++.+++.
T Consensus 80 l~~l~~~gp~~~~~-~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMi 158 (559)
T COG4988 80 LDKLAKLGPAFIAQ-KPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMI 158 (559)
T ss_pred HHHHHhCChhhhcC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 221 MYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSW 300 (1265)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1265)
++++..++..+++...+.++++.+-+.++|+.|+|+|+..+...+++.+..++.++..++.-++.-+...++.++..++.
T Consensus 159 lvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsi 238 (559)
T COG4988 159 LVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSI 238 (559)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998888888999999988
Q ss_pred HHHHHHHHHHHHh-cccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCc
Q 000830 301 SLLVWYVSVVVHK-HISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLS 379 (1265)
Q Consensus 301 ~~~~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~ 379 (1265)
+++..+.+....+ |.++....+.+++..--++.|+..+...++.-+.+.++.+.++.+++.+.+..+............
T Consensus 239 AlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~ 318 (559)
T COG4988 239 ALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPP 318 (559)
T ss_pred HHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCC
Confidence 8888777776666 677766555554444445679999999999999999999999999987654322111001111122
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
..++.+|++|.||+.+ ++++|+||++++|+++||||+||||||||+++|+|+++|++|+|.+||+++++++.+.||++
T Consensus 319 ~ei~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 319 IEISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred ceeeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhH
Confidence 3455669999998643 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000830 460 IGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNP 539 (1265)
Q Consensus 460 i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 539 (1265)
++||+|+|+||++||||||++++++++++++.++++.+++.+|+.. |+|+||.+||+|.+|||||+||+++||||++++
T Consensus 397 i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~ 475 (559)
T COG4988 397 ISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPA 475 (559)
T ss_pred eeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHH
Q 000830 540 SILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQL 619 (1265)
Q Consensus 540 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 619 (1265)
+++|||||||+||.+||+.|.+.|.++.+++|+|+||||+..+++||+|+||++|++++.|+|++|.++ ++.|++|+..
T Consensus 476 ~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~ 554 (559)
T COG4988 476 SLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQ 554 (559)
T ss_pred CEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 8999999987
Q ss_pred HH
Q 000830 620 QE 621 (1265)
Q Consensus 620 ~~ 621 (1265)
|+
T Consensus 555 q~ 556 (559)
T COG4988 555 QE 556 (559)
T ss_pred Hh
Confidence 75
No 27
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=7.3e-83 Score=811.68 Aligned_cols=606 Identities=24% Similarity=0.324 Sum_probs=523.1
Q ss_pred CCCCCCC-CcccccCcccCCCCCCCCcchhhhhHHHhhhhhHhHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHH
Q 000830 1 MSTPAVG-SFPVNDYNNSSNNNNNNNTEDQESSKKQQQKRSVSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFF 79 (1265)
Q Consensus 1 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (1265)
+.||+.| -..++.++..+.|++......+.. .++ ++....+.+++++.+++++ .+...++++++..++....|+++
T Consensus 86 i~Dp~~g~~~~i~~~e~~~~~~g~~l~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~ll~l~~p~~~ 162 (694)
T TIGR01846 86 IYDPPGDAPEVLSREVLEALWSGTVILLATRS-VAG-KALKFGFSWFIPAIIRYRK-QFREVLLISLALQLFALVTPLLF 162 (694)
T ss_pred EEcCCCCCceeeCHHHHHhhCCCeEEEEecCc-ccc-ccccCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4699999 667888888888988666555443 221 1222346667666665433 33445555556666666677789
Q ss_pred HHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChh
Q 000830 80 GKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTG 159 (1265)
Q Consensus 80 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G 159 (1265)
+.++|.+.... . ...+..+.+.++++.++..++.+++.++....+.++..++|.++|+|++++|+++|++ .++|
T Consensus 163 ~~iid~v~~~~----~-~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~-~~~g 236 (694)
T TIGR01846 163 QVVIDKVLVHR----G-LSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPLGYFES-RRVG 236 (694)
T ss_pred HHHHHHhhccC----C-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCC-CCHH
Confidence 99999765321 1 1223333344445555667888999999999999999999999999999999999997 5999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 160 EVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVK 239 (1265)
Q Consensus 160 ~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1265)
++++|+ +|++.+++++...+..++..+...++.++++++++|.+++++++.+|+++++..++.++.++..++..+..++
T Consensus 237 ~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 315 (694)
T TIGR01846 237 DTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAA 315 (694)
T ss_pred HHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 6999999999888888887777777778899999999999999999999888888888889999999999999
Q ss_pred HHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Q 000830 240 AGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGG 319 (1265)
Q Consensus 240 ~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g 319 (1265)
.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+..+....+..++..+..++++++|++++..|.++.|
T Consensus 316 ~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G 395 (694)
T TIGR01846 316 ATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPG 395 (694)
T ss_pred HHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHH
Confidence 99999999999999999999999999999999999999999888888877777777778888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCcccEEEEeEEEECCCCCCCcc
Q 000830 320 ESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAI 399 (1265)
Q Consensus 320 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~ 399 (1265)
.++++.........|+..+...+..+++++.+.+|+.++++.+++.+.. .....+...+.|+++||+|+|++. ++++
T Consensus 396 ~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~--~~~~~~~~~~~i~~~~vsf~y~~~-~~~i 472 (694)
T TIGR01846 396 QLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA--GLAALPELRGAITFENIRFRYAPD-SPEV 472 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC--CCCCCCCCCCeEEEEEEEEEcCCC-Cccc
Confidence 9998877777777899999999999999999999999999866543211 111122345689999999999743 3469
Q ss_pred ccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhc
Q 000830 400 FDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENIL 479 (1265)
Q Consensus 400 l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~ 479 (1265)
|+|+||++++||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|+||+|+|++|++||+|||.
T Consensus 473 l~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~ 552 (694)
T TIGR01846 473 LSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIA 552 (694)
T ss_pred cccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHH
Q 000830 480 YGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSV 559 (1265)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i 559 (1265)
++.|+.+++++.++|+.+++++++..+|+|+||.+||+|.+||||||||++|||||+++|+|||||||||+||+++++.+
T Consensus 553 ~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i 632 (694)
T TIGR01846 553 LCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALI 632 (694)
T ss_pred cCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHH
Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHHH
Q 000830 560 QEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQLQ 620 (1265)
Q Consensus 560 ~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 620 (1265)
.+.|+++.+++|+|+||||+++++.||+|++|++|+|++.|+|+|++++ ++.|++++..|
T Consensus 633 ~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 633 MRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLAL-QGLYARLWQQQ 692 (694)
T ss_pred HHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHc-CChHHHHHHhh
Confidence 9999998889999999999999999999999999999999999999987 79999998754
No 28
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.1e-82 Score=805.82 Aligned_cols=555 Identities=26% Similarity=0.357 Sum_probs=484.0
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 691 VRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLT 770 (1265)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 770 (1265)
.+++++.+...++++++..+.....++.+..+++...... .......+.+.++++.++..++.+++.++....+.++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (686)
T TIGR03797 131 LRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDA--DRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMD 208 (686)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555655555555555544444444444444444332111 11122334455555666678888899999999999999
Q ss_pred HHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 771 LRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATY 850 (1265)
Q Consensus 771 ~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~ 850 (1265)
.++|..+|+++++.|+.||++ .++|++++|++ |++.+++.+...+...+..+...++++++++.++|.+++++++.+
T Consensus 209 ~~l~~~~~~~ll~~~~~~~~~--~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 285 (686)
T TIGR03797 209 ASLQAAVWDRLLRLPVSFFRQ--YSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALA 285 (686)
T ss_pred HHHHHHHHHHHHcCCHHHHCC--CChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999996 88999999997 799999999888888777888888888899999999999999888
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000830 851 PLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGIS 930 (1265)
Q Consensus 851 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1265)
|+.++..++..+..+...++..+...+..+.+.|+++|+++||+++.|+++.++|.+...+..+...+......+...+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (686)
T TIGR03797 286 LVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFN 365 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777777777777777888888889999999999999999999999999999999999998888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcc
Q 000830 931 QFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIGEE 1010 (1265)
Q Consensus 931 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~ 1010 (1265)
.++..+...+.+|+|.+++..+.++.+.++++..+......++..+......++.+..+.+|+.++++.+++..... ..
T Consensus 366 ~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~-~~ 444 (686)
T TIGR03797 366 AVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK-TD 444 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc-CC
Confidence 88888888999999999999999999999998888888888899999999999999999999999998765432211 11
Q ss_pred cCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHH
Q 000830 1011 LTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLK 1090 (1265)
Q Consensus 1011 ~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~ 1090 (1265)
..+..|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+
T Consensus 445 ~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~ 523 (686)
T TIGR03797 445 PGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQ 523 (686)
T ss_pred CCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHH
Confidence 22345789999999999743 35799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1091 SLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1091 ~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
++|++|+||||||++|+|||||||.++++ ++++++++|++.++++++++++|+||||.+||+|.+|||||||||+||||
T Consensus 524 ~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARA 602 (686)
T TIGR03797 524 AVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARA 602 (686)
T ss_pred HHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999988 99999999999999999999999999999999999999999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCCcHHH
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENEDGAYF 1250 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~ 1250 (1265)
++++|+|||||||||+||++||+.+++.|++. ++|+|+||||+++++.||+|+||++|+|+|.|+|+||++ ++|.|+
T Consensus 603 ll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~-~~~~y~ 679 (686)
T TIGR03797 603 LVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMA-REGLFA 679 (686)
T ss_pred HhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHh-CCcHHH
Confidence 99999999999999999999999999999987 689999999999999999999999999999999999998 689999
Q ss_pred HHHHHh
Q 000830 1251 KLINLQ 1256 (1265)
Q Consensus 1251 ~l~~~~ 1256 (1265)
+|++.|
T Consensus 680 ~l~~~q 685 (686)
T TIGR03797 680 QLARRQ 685 (686)
T ss_pred HHHHhc
Confidence 999865
No 29
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.1e-82 Score=727.46 Aligned_cols=550 Identities=27% Similarity=0.384 Sum_probs=489.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 701 GTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSA 780 (1265)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ 780 (1265)
..+++++.++.....+++++..+...+.... ......+.+.++++.++..++.+.+......++.++...+|+.++++
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~--~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQL--FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555666677777666654221 23344556666667777788888888899999999999999999999
Q ss_pred HHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 781 ILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATYPLIISGHISE 860 (1265)
Q Consensus 781 ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~ 860 (1265)
+.+.+..|-.. .|+|+..+.++..++.++.++...++.+....+..++.++.+++++|..+++++.+.|++.+++++.
T Consensus 83 l~~~gp~~~~~--~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv 160 (559)
T COG4988 83 LAKLGPAFIAQ--KPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV 160 (559)
T ss_pred HHhCChhhhcC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998886 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 861 KLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGL 940 (1265)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1265)
.+..+...++....+.+.++++-+.++|+.|+|.|+..+...++..+...+.++..++.-+.+.....+..++.+...++
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAl 240 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIAL 240 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888999999999999999999999999999999999999999999999999999888888899998888776
Q ss_pred HHH-HHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC--cccCCCccc
Q 000830 941 ALW-YGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIG--EELTNVEGT 1017 (1265)
Q Consensus 941 ~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~--~~~~~~~g~ 1017 (1265)
... .|..++..|.+++...+.++...--...|+....+.++.-..+..+++.++.+.+.+.+...... ...+..+..
T Consensus 241 vAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~e 320 (559)
T COG4988 241 VAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIE 320 (559)
T ss_pred HHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCce
Confidence 654 45555544788887777777777778889999999999999999999999999987765433221 112222345
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++|+||+.+ ++++|+||+++||+++||||+||||||||+++|.|+++|++|+|.+||+|.++++.+.||++++
T Consensus 321 i~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~ 398 (559)
T COG4988 321 ISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQIS 398 (559)
T ss_pred eeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHee
Confidence 66679999998653 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000830 1098 LVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEI 1177 (1265)
Q Consensus 1098 ~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1177 (1265)
+|||+|++|+|||||||.+++++.+|+++++|++.+++.+|++. |+|+||.+||+|.+|||||+|||++||||++++++
T Consensus 399 ~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l 477 (559)
T COG4988 399 WVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASL 477 (559)
T ss_pred eeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCE
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred EEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHHHhh
Q 000830 1178 LLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENEDGAYFKLINLQQ 1257 (1265)
Q Consensus 1178 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~~~~ 1257 (1265)
+|||||||+||.+||+.|++.|.++++++|||+||||++.+.+||+|+|||+||++|.|+|++|.+ ++|.|++|+++|.
T Consensus 478 ~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~-~~~~y~~l~~~q~ 556 (559)
T COG4988 478 LLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSE-KQGLYANLLKQQE 556 (559)
T ss_pred EEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhh-cCcHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999998 7999999999886
Q ss_pred c
Q 000830 1258 R 1258 (1265)
Q Consensus 1258 ~ 1258 (1265)
.
T Consensus 557 ~ 557 (559)
T COG4988 557 G 557 (559)
T ss_pred c
Confidence 5
No 30
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.8e-82 Score=806.80 Aligned_cols=562 Identities=26% Similarity=0.388 Sum_probs=489.8
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 684 AIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFG 763 (1265)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 763 (1265)
+.+++.+.+++++.+...++++++..+.....++.+..+++...... .......+.+.++++.++..++.+++.++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (708)
T TIGR01193 144 LLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHK--MMGTLGIISIGLIIAYIIQQILSYIQIFLLN 221 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566667777777666665555555554455555555555443211 1112222334444555666778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 764 IMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRIT 843 (1265)
Q Consensus 764 ~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 843 (1265)
+.+.++..++|.++|+++++.|+.||++ +++|++++|++ |.+.+.+.+.......+..+..++++++++++++|.++
T Consensus 222 ~~~~~~~~~l~~~~~~~ll~l~~~~f~~--~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 298 (708)
T TIGR01193 222 VLGQRLSIDIILSYIKHLFELPMSFFST--RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLF 298 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCC--CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999996 89999999998 89999999888888888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000830 844 LVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIA 923 (1265)
Q Consensus 844 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1265)
+++++.+|++++..++..+..++..++..+...+..+.+.|+++|+++||++|.|+++.++|.+...+..+...+.....
T Consensus 299 li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (708)
T TIGR01193 299 LLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKAD 378 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888888888889999999999999999999999999999999998888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 000830 924 GIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQV 1003 (1265)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 1003 (1265)
.....+..++..+...+++|+|++++..+.++.|.++++..+......++..+......+..+..+.+|+.++++.+++.
T Consensus 379 ~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~ 458 (708)
T TIGR01193 379 QGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEF 458 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 77777777777788888999999999999999999999888888888899999999999999999999999999876554
Q ss_pred cCCCC-cccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCc
Q 000830 1004 IGDIG-EELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGI 1082 (1265)
Q Consensus 1004 ~~~~~-~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~ 1082 (1265)
..... ...++..|.|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+
T Consensus 459 ~~~~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~ 536 (708)
T TIGR01193 459 INKKKRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGF 536 (708)
T ss_pred cccccccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCE
Confidence 32211 112344678999999999973 346999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccEEEecCCCCCcccHHHHhccC-CCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhH
Q 000830 1083 DIKRLNLKSLRKHIALVQQEPALFATSIYENILYG-KDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQ 1161 (1265)
Q Consensus 1083 di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g-~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1161 (1265)
|+++++.+++|++|+||||||+||+|||||||.++ .++++++++++|++.+++++++.++|+||||.+||+|.+|||||
T Consensus 537 ~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQ 616 (708)
T TIGR01193 537 SLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQ 616 (708)
T ss_pred EHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHH
Confidence 99999999999999999999999999999999998 57899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhh
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||||+||||++++|+|||||||||+||++||+.+++.|++. +++|+|+||||+++++.||+|+||++|+++|.|+|+||
T Consensus 617 rQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L 695 (708)
T TIGR01193 617 KQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDEL 695 (708)
T ss_pred HHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999985 78999999999999999999999999999999999999
Q ss_pred hhcCCcHHHHHHH
Q 000830 1242 VENEDGAYFKLIN 1254 (1265)
Q Consensus 1242 l~~~~g~f~~l~~ 1254 (1265)
++ .+|.|++||+
T Consensus 696 ~~-~~~~y~~l~~ 707 (708)
T TIGR01193 696 LD-RNGFYASLIH 707 (708)
T ss_pred Hh-cCCcHHHHhh
Confidence 98 6899999985
No 31
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.6e-81 Score=780.82 Aligned_cols=564 Identities=22% Similarity=0.289 Sum_probs=476.9
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 686 KLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDT--TQREVKKITILFCCAAVITVIVHAIEHLSFG 763 (1265)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 763 (1265)
+++++.+++++.+..+.++.++...........+...++........ ...........+.+++++..++.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (574)
T PRK11160 6 PFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSH 85 (574)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778877777777666665555444445555555543221110 0000111122344455667778888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 764 IMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRIT 843 (1265)
Q Consensus 764 ~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 843 (1265)
..+.+...++|.++|+++++.|+.||++ .++|++++|+++|++.++.++...+..++..++.++++++++++++|.++
T Consensus 86 ~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 86 DATFRVLTHLRVFTFSKLLPLSPAGLAR--YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHhhccChHhhcc--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999996 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000830 844 LVVVATYPLIISG-HISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQI 922 (1265)
Q Consensus 844 lv~l~~~pl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1265)
+++++.+|++++. .++..+..+...++.++...+....+.|.++|+++||+|+.|+++.+++.+..++..+...+..+.
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888777765543 344455556666677778888889999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000830 923 AGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIV-TALAMGETLALVPDLLKGNQMAASVFEVLDRKT 1001 (1265)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~ 1001 (1265)
.+....+..++..+..++.+++|.+++ .+..+.+.+++.+.+... ...++..+......+..+..+.+|+.++++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~ 322 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKP 322 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888888888888888888889998884 677888887766554433 334556666777888889999999999998766
Q ss_pred cccCCCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECC
Q 000830 1002 QVIGDIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDG 1081 (1265)
Q Consensus 1002 ~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG 1081 (1265)
+..........+..+.|+|+||+|+|+++ +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||
T Consensus 323 ~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g 401 (574)
T PRK11160 323 EVTFPTTSTAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNG 401 (574)
T ss_pred CCCCCcccCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 53221111112345789999999999753 24689999999999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhH
Q 000830 1082 IDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQ 1161 (1265)
Q Consensus 1082 ~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1161 (1265)
+|+++++.+++|++|+||||||++|+|||+|||.++.++.+|+++++|++.+++++++++ |+||||.+||+|.+|||||
T Consensus 402 ~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGq 480 (574)
T PRK11160 402 QPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGE 480 (574)
T ss_pred EEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHH
Confidence 999999999999999999999999999999999999989999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhh
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
|||||||||++++|+|||||||||+||++||+.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+||
T Consensus 481 rqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l 560 (574)
T PRK11160 481 QRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQEL 560 (574)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHH
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred hhcCCcHHHHHHHH
Q 000830 1242 VENEDGAYFKLINL 1255 (1265)
Q Consensus 1242 l~~~~g~f~~l~~~ 1255 (1265)
++ .+|.|++||+.
T Consensus 561 ~~-~~g~y~~l~~~ 573 (574)
T PRK11160 561 LA-QQGRYYQLKQR 573 (574)
T ss_pred Hh-cCcHHHHHHhh
Confidence 98 69999999863
No 32
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-84 Score=714.54 Aligned_cols=554 Identities=28% Similarity=0.368 Sum_probs=451.2
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH
Q 000830 59 SLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSV------AILFSSWIEVSCWMYTGERQ 132 (1265)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 132 (1265)
+...++.++.-++....|.+.+.++|.+.. +..... .....++.+.+ +..+++-++.++|..+.+-.
T Consensus 218 ~~cl~ll~i~rli~~~~pi~~k~iv~~lta----p~~~~~---~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyt 290 (790)
T KOG0056|consen 218 VFCLFLLIIGRLINVSLPILSKWIVDELTA----PDTFQY---SLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYT 290 (790)
T ss_pred HHHHHHHHHHHHHhhhhHHhHHHHHHhhcC----cchhhH---HHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhH
Confidence 334444445555566667788889887652 111111 11112222222 23456677788888888888
Q ss_pred HHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000830 133 AAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFII-GFARVWQISLVTLSI 211 (1265)
Q Consensus 133 ~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~l~l~~l~~ 211 (1265)
.+++-..+|+|+..+++.|+-+ +.+|+++..++...+.+. ++...+.++.-.+.-+.++++. ....+|+.+|+++++
T Consensus 291 tR~ie~~lfrHlh~LSlrwHL~-rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~ 368 (790)
T KOG0056|consen 291 TREIETELFRHLHNLSLRWHLN-RRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLM 368 (790)
T ss_pred HHHHHHHHHHHHHhhceeeeec-ccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHH
Confidence 8999999999999999999976 589999988877766665 3333333333333333333333 334688899998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 212 VPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGS 291 (1265)
Q Consensus 212 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1265)
+.+...+...+.....+..+++..+..+......+++-+.+|||-|++|+++.++|.+...++.+...|...-..+.+..
T Consensus 369 m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~ 448 (790)
T KOG0056|consen 369 MLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIV 448 (790)
T ss_pred HHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766655444444455555665555566667789999999999999999999999999999888877765544443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Q 000830 292 MHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKT 371 (1265)
Q Consensus 292 ~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~ 371 (1265)
-+.+..++.+..-.+..|.+..+.++.|+.+.+..+++.+.+|+..+...+..++...+-+++++++++++++..+.+ .
T Consensus 449 Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P-~ 527 (790)
T KOG0056|consen 449 QNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP-G 527 (790)
T ss_pred hhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC-C
Confidence 333333333333344456677888999998888888889999999999999999999999999999999888765533 2
Q ss_pred CCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCC
Q 000830 372 GRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGL 451 (1265)
Q Consensus 372 ~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~ 451 (1265)
..+....+|.|+|+||+|.|+ +++++|+||||+++||+++|+|||||+||||++++|.|||+.++|.|+|||+||++.
T Consensus 528 a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnv 605 (790)
T KOG0056|consen 528 APPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNV 605 (790)
T ss_pred CCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHH
Confidence 234445678999999999996 457899999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 452 DLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 452 ~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
...++|++||+||||..|||+||..||.|++|.+++||+.+|++.|++||.|..+|+||+|.|||+|-.||||||||+||
T Consensus 606 t~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAi 685 (790)
T KOG0056|consen 606 TQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAI 685 (790)
T ss_pred HHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCch
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNS 611 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 611 (1265)
||+++++|.|++|||+|||||..||+.||.+|.++..+||.|+|+||+|++-+||.|+|+++|+|+|.|+|+||+.+++|
T Consensus 686 ARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG 765 (790)
T KOG0056|consen 686 ARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGG 765 (790)
T ss_pred HHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred HHHHHHHHHHHhh
Q 000830 612 AYAALVQLQEAAS 624 (1265)
Q Consensus 612 ~~~~~~~~~~~~~ 624 (1265)
.|++||+.|+...
T Consensus 766 ~Ya~MWq~qqa~g 778 (790)
T KOG0056|consen 766 AYADMWQAQQAMG 778 (790)
T ss_pred cHHHHHHHHHhcC
Confidence 9999998876543
No 33
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.8e-81 Score=783.04 Aligned_cols=566 Identities=30% Similarity=0.464 Sum_probs=491.2
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 43 LFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEV 122 (1265)
Q Consensus 43 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1265)
+++++++.+++++. +++.+++.++..++....+.+++.++|.+.... . ...+....+.+++++++..++.++..
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~----~-~~~~~~~~~~~~~~~l~~~~~~~~~~ 86 (582)
T PRK11176 13 FRRLWPTIAPFKAG-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKA----D-RSVLKWMPLVVIGLMILRGITSFISS 86 (582)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----c-hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666555443 344445555555555666667888888654311 0 11111222223344556667778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 123 SCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVW 202 (1265)
Q Consensus 123 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 202 (1265)
++..+.+.++..++|..+|+++++.|+.+|++ .++|++++|+++|++.+++.+...+..++..++.+++.++++++++|
T Consensus 87 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~-~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (582)
T PRK11176 87 YCISWVSGKVVMTMRRRLFGHMMGMPVSFFDK-QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSW 165 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999987 58999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000830 203 QISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAG 282 (1265)
Q Consensus 203 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 282 (1265)
.+++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..
T Consensus 166 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (582)
T PRK11176 166 QLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMV 245 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccc
Q 000830 283 LAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERD 362 (1265)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 362 (1265)
+..+....+..++..+..++++++|++.+..|.++.|.+++++.+......|+..+...+..+.+++.+.+|+.++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~ 325 (582)
T PRK11176 246 SASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLE 325 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88887777777777777778888999999999999999887776666677789999999999999999999999999765
Q ss_pred cccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEE
Q 000830 363 TMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEIL 442 (1265)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 442 (1265)
++.+. .....++..+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.
T Consensus 326 ~~~~~---~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~ 401 (582)
T PRK11176 326 QEKDE---GKRVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEIL 401 (582)
T ss_pred CcCCC---CCcCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEE
Confidence 43221 111122334579999999999753 35799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCC-CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCC
Q 000830 443 LDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDD-ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQL 521 (1265)
Q Consensus 443 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~L 521 (1265)
+||+|+++++.+++|++|+||||||++|++||+|||++|+++ .++++++++++.+++++++.++|+|+||.+||+|.+|
T Consensus 402 i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~L 481 (582)
T PRK11176 402 LDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLL 481 (582)
T ss_pred ECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcC
Confidence 999999999999999999999999999999999999999765 6899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeC
Q 000830 522 SGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 522 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 601 (1265)
||||||||+|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|+|+|.|+
T Consensus 482 SGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~ 561 (582)
T PRK11176 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGT 561 (582)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999999878999999999999999999999999999999999
Q ss_pred cchhccCCchHHHHHHHHH
Q 000830 602 HEELISNPNSAYAALVQLQ 620 (1265)
Q Consensus 602 ~~~l~~~~~~~~~~~~~~~ 620 (1265)
|++++++ ++.|++++..|
T Consensus 562 ~~~l~~~-~~~y~~l~~~~ 579 (582)
T PRK11176 562 HAELLAQ-NGVYAQLHKMQ 579 (582)
T ss_pred HHHHHhC-CChHHHHHHHH
Confidence 9999987 78999998765
No 34
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.7e-81 Score=802.78 Aligned_cols=561 Identities=23% Similarity=0.325 Sum_probs=485.2
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 684 AIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFG 763 (1265)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 763 (1265)
++.++...+++++.+...++++++..+.....++.....++...... .......+.+.++++.++..++..++.++..
T Consensus 142 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (710)
T TIGR03796 142 LRALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQG--RQDWLRPLLLGMGLTALLQGVLTWLQLYYLR 219 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666665555544444444333333444444444332111 1111222344455555667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 764 IMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRIT 843 (1265)
Q Consensus 764 ~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 843 (1265)
..+.++..+++.++|+++++.|++||++ .++|++++|++.| +.+++++...+...+..+..+++.+++++.++|.++
T Consensus 220 ~~~~~~~~~l~~~~~~~ll~l~~~~~~~--~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 296 (710)
T TIGR03796 220 RLQIKLAVGMSARFLWHILRLPVRFFAQ--RHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLT 296 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcC--CcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999996 8999999999988 679999988888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000830 844 LVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIA 923 (1265)
Q Consensus 844 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1265)
++.++.+|+.++..++..+..+....+..+...+..+.+.|+++|+++||++++|+.+.++|.+...+..+...+.....
T Consensus 297 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (710)
T TIGR03796 297 LIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLT 376 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888887777777777777777778888899999999999999999999999999999988888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 000830 924 GIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQV 1003 (1265)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 1003 (1265)
.+...+..++..+...+++|+|++++..+.++.+.+++...+......++..+...+..+.....+.+|+.++++.+++.
T Consensus 377 ~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~ 456 (710)
T TIGR03796 377 QILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDP 456 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 88888888888888889999999999999999999998888888888899999999999999999999999999876554
Q ss_pred cCCC------Cccc-CCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcE
Q 000830 1004 IGDI------GEEL-TNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGK 1076 (1265)
Q Consensus 1004 ~~~~------~~~~-~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1076 (1265)
.... .... ++..|.|+|+||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+
T Consensus 457 ~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~ 535 (710)
T TIGR03796 457 LLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGE 535 (710)
T ss_pred ccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcE
Confidence 3211 0111 2345789999999999853 356999999999999999999999999999999999999999999
Q ss_pred EEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCC
Q 000830 1077 VMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQ 1156 (1265)
Q Consensus 1077 I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~ 1156 (1265)
|++||+|+++++.+++|++|+||||||++|+|||||||.++.++++++++++|++.+++++++.++|+||||.+||+|.+
T Consensus 536 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~ 615 (710)
T TIGR03796 536 ILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGAN 615 (710)
T ss_pred EEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCC
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEec
Q 000830 1157 LSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1157 LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~G 1236 (1265)
||||||||||||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++..||||+||++|+|+|.|
T Consensus 616 LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G 693 (710)
T TIGR03796 616 LSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRG 693 (710)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEec
Confidence 999999999999999999999999999999999999999999987 589999999999999999999999999999999
Q ss_pred ChhhhhhcCCcHHHHHH
Q 000830 1237 THSSLVENEDGAYFKLI 1253 (1265)
Q Consensus 1237 t~~eLl~~~~g~f~~l~ 1253 (1265)
+|+||++ .+|.|++|+
T Consensus 694 ~~~~Ll~-~~~~y~~l~ 709 (710)
T TIGR03796 694 THEELWA-VGGAYARLI 709 (710)
T ss_pred CHHHHHH-cCCcHHHHh
Confidence 9999998 689999987
No 35
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.3e-80 Score=775.71 Aligned_cols=566 Identities=26% Similarity=0.353 Sum_probs=477.1
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 43 LFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEV 122 (1265)
Q Consensus 43 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1265)
+++++.+.+++++. +++.+++.++..++.+..|.+++.++|.+.... .. . ......+.+.++++.++..++.++..
T Consensus 11 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (592)
T PRK10790 11 LKRLLAYGSPWRKP-LGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKG-NL-P-LGLVAGLAAAYVGLQLLAAGLHYAQS 86 (592)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-Cc-c-hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666555443 455666667777777778888999999764321 10 0 01111122223334445566778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 123 SCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVW 202 (1265)
Q Consensus 123 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 202 (1265)
++....+.++..++|.++|+++++.|+++|++ .++|++++|+++|++.+++.+...+..++..+..+++.++++++++|
T Consensus 87 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~-~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (592)
T PRK10790 87 LLFNRAAVGVVQQLRTDVMDAALRQPLSAFDT-QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDW 165 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999997 58999999999999999999999999999999888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000830 203 QISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAG 282 (1265)
Q Consensus 203 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 282 (1265)
.++++.++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 166 ~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (592)
T PRK10790 166 RMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTL 245 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888887777777888888888888888999999999999999999999999999999998888877777666
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcc
Q 000830 283 LAKGLG-LGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIER 361 (1265)
Q Consensus 283 ~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~ 361 (1265)
+..+.. ..+..++..+...+++++++. +..|.++.|.+++++.+......|+..+...+..+.++..+.+|+.++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~ 324 (592)
T PRK10790 246 RLDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDG 324 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 655543 223333333322223333333 568899999988887777777789999999999999999999999999976
Q ss_pred ccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceE
Q 000830 362 DTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEI 441 (1265)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 441 (1265)
+++... . .......+.|+|+||+|+|++ +.++|+|+||++++||++||||+||||||||+++|+|+|+|++|+|
T Consensus 325 ~~~~~~--~--~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I 398 (592)
T PRK10790 325 PRQQYG--N--DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEI 398 (592)
T ss_pred CCccCC--C--CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceE
Confidence 543211 1 111223467999999999974 3469999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCC
Q 000830 442 LLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQL 521 (1265)
Q Consensus 442 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~L 521 (1265)
.+||+|+++++++++|++|+||||+|++|++||+|||++++ +.++++++++|+.+++++++..+|+|+||.+||+|.+|
T Consensus 399 ~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~L 477 (592)
T PRK10790 399 RLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNL 477 (592)
T ss_pred EECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCC
Confidence 99999999999999999999999999999999999999998 57899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeC
Q 000830 522 SGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 522 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 601 (1265)
||||||||+|||||+++|+|||||||||+||+++++.|.+.|+++.+++|+|+||||++.++.||+|++|++|++++.|+
T Consensus 478 SGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~ 557 (592)
T PRK10790 478 SVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGT 557 (592)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred cchhccCCchHHHHHHHHHHH
Q 000830 602 HEELISNPNSAYAALVQLQEA 622 (1265)
Q Consensus 602 ~~~l~~~~~~~~~~~~~~~~~ 622 (1265)
|+||+++ ++.|+++++.|..
T Consensus 558 ~~~L~~~-~~~y~~l~~~~~~ 577 (592)
T PRK10790 558 HQQLLAA-QGRYWQMYQLQLA 577 (592)
T ss_pred HHHHHhC-CCHHHHHHHHHhh
Confidence 9999987 7999999987643
No 36
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.5e-80 Score=776.55 Aligned_cols=567 Identities=28% Similarity=0.459 Sum_probs=484.3
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 685 IKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGI 764 (1265)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 764 (1265)
+.++.+.+++++.+....++.++.........+.+...++..+.. ..........+.+++++++..++.+++.++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 91 (582)
T PRK11176 14 RRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGK--ADRSVLKWMPLVVIGLMILRGITSFISSYCISW 91 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666666555444444433333233333333333322211 001111122233344556677778888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 765 MGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITL 844 (1265)
Q Consensus 765 ~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~l 844 (1265)
.+.+...++|..+++++++.|..+|++ ..+|++++|+++|++.++..+...+..++..++.++++++++++++|.+++
T Consensus 92 ~~~~~~~~lr~~~~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 169 (582)
T PRK11176 92 VSGKVVMTMRRRLFGHMMGMPVSFFDK--QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSL 169 (582)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999986 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000830 845 VVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAG 924 (1265)
Q Consensus 845 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (1265)
++++.+|+.++..+...+..+....+.++...+....+.|.++|+++||+++.++.+.++|.+..+...+...+..+...
T Consensus 170 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (582)
T PRK11176 170 ILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASS 249 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888877777777777777777777788888999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 000830 925 IFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVI 1004 (1265)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 1004 (1265)
+...+..++..+...+.+++|.+.+..+.++++.++..+.+......++..+...+..+.....+.+|+.++++.+++..
T Consensus 250 ~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 329 (582)
T PRK11176 250 ISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKD 329 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCC
Confidence 88888888888888888999999999999999999888888777888899999999999999999999999987654422
Q ss_pred CCCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCccc
Q 000830 1005 GDIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDI 1084 (1265)
Q Consensus 1005 ~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di 1084 (1265)
.. ....++..+.|+|+||+|+|+++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+
T Consensus 330 ~~-~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i 407 (582)
T PRK11176 330 EG-KRVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDL 407 (582)
T ss_pred CC-CcCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEh
Confidence 11 11122345679999999999754 35799999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCC-CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1085 KRLNLKSLRKHIALVQQEPALFATSIYENILYGKDG-ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1085 ~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~-~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
++++.+++|++|+||||||++|+|||||||.+++++ .+|++++++++.++++++++++|+||||.+||+|.+|||||||
T Consensus 408 ~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQ 487 (582)
T PRK11176 408 RDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQ 487 (582)
T ss_pred hhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHH
Confidence 999999999999999999999999999999998754 7999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
||+|||||+++|+|||||||||+||++||+.+.+.|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|++|++
T Consensus 488 Ri~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 488 RIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred HHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999998
Q ss_pred cCCcHHHHHHHHhhc
Q 000830 1244 NEDGAYFKLINLQQR 1258 (1265)
Q Consensus 1244 ~~~g~f~~l~~~~~~ 1258 (1265)
.++.|++|++.|.+
T Consensus 568 -~~~~y~~l~~~~~~ 581 (582)
T PRK11176 568 -QNGVYAQLHKMQFG 581 (582)
T ss_pred -CCChHHHHHHHHhc
Confidence 68999999987643
No 37
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.1e-80 Score=775.95 Aligned_cols=565 Identities=25% Similarity=0.355 Sum_probs=470.7
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 686 KLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIM 765 (1265)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 765 (1265)
+++.+.+++++.+....++.++.....+..++.+...++...............+.++++++.++..++.+++.+.....
T Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (592)
T PRK10790 13 RLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRA 92 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566666666666666665555555555666665544321111111111122334444455667788888888999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 766 GERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLV 845 (1265)
Q Consensus 766 ~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv 845 (1265)
+.+...++|.++|+++++.|.+||+. .++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.++++
T Consensus 93 ~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li 170 (592)
T PRK10790 93 AVGVVQQLRTDVMDAALRQPLSAFDT--QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALV 170 (592)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999996 7899999999999999999999999999999998999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000830 846 VVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGI 925 (1265)
Q Consensus 846 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1265)
+++.+|+.++.........+...++..+...+...++.|.++|+++||+|+.++++.+++.+..++..+...+..+..++
T Consensus 171 ~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (592)
T PRK10790 171 AIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGF 250 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887776666666666666666777778889999999999999999999999999998888777766665555444
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 000830 926 F-YGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVI 1004 (1265)
Q Consensus 926 ~-~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 1004 (1265)
. ..+..++..+...+.++++.. +..+.++.+.+++...+......++..+......+.....+.+|+.++++.+++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 329 (592)
T PRK10790 251 LLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQY 329 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccC
Confidence 3 233333333332222223333 46788999999888888888888999999999999999999999999987654321
Q ss_pred CCCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCccc
Q 000830 1005 GDIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDI 1084 (1265)
Q Consensus 1005 ~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di 1084 (1265)
.. ...+...+.|+|+||+|+|++ +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+
T Consensus 330 ~~--~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i 405 (592)
T PRK10790 330 GN--DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPL 405 (592)
T ss_pred CC--CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEh
Confidence 11 112233578999999999974 34699999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000830 1085 KRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQR 1164 (1265)
Q Consensus 1085 ~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQr 1164 (1265)
++++.+++|++|+||||||.+|+|||||||.+++ +++|+++++|++.++++++++++|+||||.+||+|.+||||||||
T Consensus 406 ~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQR 484 (592)
T PRK10790 406 SSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQL 484 (592)
T ss_pred hhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 9999999999999999999999999999999987 689999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhc
Q 000830 1165 VAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1165 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
|||||||+++|+|||||||||+||++||+.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|+||++
T Consensus 485 ialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~- 563 (592)
T PRK10790 485 LALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLA- 563 (592)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHh-
Confidence 9999999999999999999999999999999999999988999999999999999999999999999999999999998
Q ss_pred CCcHHHHHHHHhhcc
Q 000830 1245 EDGAYFKLINLQQRQ 1259 (1265)
Q Consensus 1245 ~~g~f~~l~~~~~~~ 1259 (1265)
.++.|+++++.|..+
T Consensus 564 ~~~~y~~l~~~~~~~ 578 (592)
T PRK10790 564 AQGRYWQMYQLQLAG 578 (592)
T ss_pred CCCHHHHHHHHHhhh
Confidence 589999999987644
No 38
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.1e-80 Score=788.40 Aligned_cols=553 Identities=24% Similarity=0.392 Sum_probs=480.6
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 685 IKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGI 764 (1265)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 764 (1265)
.+++.+.+++++.+...++++++..++....++.+...++...... .......+.+.++++.++..++.+++.++..+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 136 HWFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQ--AFETLWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556667766655555555554444444444444444332111 11112223334444555667888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 765 MGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITL 844 (1265)
Q Consensus 765 ~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~l 844 (1265)
.+.++..++|..+|+++++.|+.| +. +++|++++|+ +|++.+++.+...+...+..+..+++.++++++++|.+++
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~~--~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 289 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-RP--ASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVW 289 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-CC--CChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999998 43 7899999999 7999999999888888888888888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000830 845 VVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAG 924 (1265)
Q Consensus 845 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (1265)
+.++.+|+.++..+...+..++..++..+...+..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+......
T Consensus 290 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (694)
T TIGR03375 290 VPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSN 369 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888887877778888888889999999999999999999999999999999999888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 000830 925 IFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVI 1004 (1265)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 1004 (1265)
....+..++..+...+.+|+|++++..+.++.+.++++..+......++..+...+.++.....+.+|+.++++.+++..
T Consensus 370 ~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~ 449 (694)
T TIGR03375 370 LATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERP 449 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 88888888888888889999999999999999999998888888889999999999999999999999999998766533
Q ss_pred CCCC-cccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcc
Q 000830 1005 GDIG-EELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGID 1083 (1265)
Q Consensus 1005 ~~~~-~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~d 1083 (1265)
.... ...++..|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|
T Consensus 450 ~~~~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~ 528 (694)
T TIGR03375 450 EGTRFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVD 528 (694)
T ss_pred CCCCCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEE
Confidence 2111 1122345789999999999753 3569999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1084 IKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1084 i~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
+++++++++|++|+||||||++|+|||||||.+++++++++++++|++.++++++++++|+||||.+||+|.+|||||||
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQ 608 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQ 608 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHH
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
||+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||++|+++|.|+|+||++
T Consensus 609 RlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 609 AVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999987
Q ss_pred c
Q 000830 1244 N 1244 (1265)
Q Consensus 1244 ~ 1244 (1265)
+
T Consensus 689 ~ 689 (694)
T TIGR03375 689 A 689 (694)
T ss_pred H
Confidence 4
No 39
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-83 Score=704.91 Aligned_cols=503 Identities=30% Similarity=0.432 Sum_probs=431.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 751 TVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTA 830 (1265)
Q Consensus 751 ~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~ 830 (1265)
+.++..++.+++..+.+...+++...+|+|+....+.|+-. ..+|+.+.-+.+..+.+. ++......+...+.-+.+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~--rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~v 348 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLN--RRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGV 348 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeec--ccccceeehhccCcchhh-HHHHHHhhcccHHHHhhh
Confidence 35667778888888888899999999999999999999985 779999988888877776 555554444444444444
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHH
Q 000830 831 SFVI-AFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSREL 909 (1265)
Q Consensus 831 ~~~~-~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~ 909 (1265)
+++. ....+|+.+++++....+.............++.+++.....+......+++-|.+|+|-|++|++..++|++.+
T Consensus 349 a~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAi 428 (790)
T KOG0056|consen 349 AMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAI 428 (790)
T ss_pred hhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHH
Confidence 4443 336788888888777665554443333333444445555555666777899999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 910 VEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQM 989 (1265)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1265)
.++.+..|+......+.......+..+.......+..+++..+..++|+++....+++..-+++.....+...+++...-
T Consensus 429 l~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiD 508 (790)
T KOG0056|consen 429 LKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFID 508 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhh
Confidence 99999988877666665555555555555555555566666778899999888888888888988888889999999999
Q ss_pred HHHHHHHhcccccccCCC-CcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhc
Q 000830 990 AASVFEVLDRKTQVIGDI-GEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILR 1068 (1265)
Q Consensus 990 ~~ri~~~~~~~~~~~~~~-~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~r 1068 (1265)
.++++++++++++..+.. ..+....+|.|+|+||+|.|+ |++|+|+||||+++||+.+|+|||||+||||++++|+|
T Consensus 509 mEnmfdllkee~eVvd~P~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfR 586 (790)
T KOG0056|consen 509 MENMFDLLKEEPEVVDLPGAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFR 586 (790)
T ss_pred HHHHHHHhhcCchhhcCCCCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHH
Confidence 999999999888765432 223334679999999999997 56789999999999999999999999999999999999
Q ss_pred cCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccc
Q 000830 1069 FYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYST 1148 (1265)
Q Consensus 1069 l~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt 1148 (1265)
|||.++|+|.|||+||+++..++||++||+||||.+||+.||..||.|++|.+++||+.+|++.|++||-|.++|+||+|
T Consensus 587 ffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t 666 (790)
T KOG0056|consen 587 FFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNT 666 (790)
T ss_pred HhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEe
Q 000830 1149 KVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIE 1228 (1265)
Q Consensus 1149 ~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~ 1228 (1265)
.|||+|-.||||||||+||||++|++|.|++|||||||||..||+.||.++.+..++||.|+|||||+|+.+||.|+|++
T Consensus 667 ~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~ 746 (790)
T KOG0056|consen 667 RVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVIS 746 (790)
T ss_pred hhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecChhhhhhcCCcHHHHHHHHhhc
Q 000830 1229 SGKIIEQGTHSSLVENEDGAYFKLINLQQR 1258 (1265)
Q Consensus 1229 ~G~Ive~Gt~~eLl~~~~g~f~~l~~~~~~ 1258 (1265)
+|+|+|.|+|+||+.+.+|.|++||+.|+.
T Consensus 747 ~G~IvErG~HeeLl~rdgG~Ya~MWq~qqa 776 (790)
T KOG0056|consen 747 NGRIVERGRHEELLKRDGGAYADMWQAQQA 776 (790)
T ss_pred CCeEeecCcHHHHHhccCCcHHHHHHHHHh
Confidence 999999999999999779999999986653
No 40
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.3e-81 Score=703.81 Aligned_cols=554 Identities=26% Similarity=0.336 Sum_probs=456.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 59 SLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRM 138 (1265)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 138 (1265)
+.++++.+.+..+....|.+++.++|.+......+ ............+.+..+...++..++...+.++.+++..+.-.
T Consensus 33 ~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~-a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~ 111 (591)
T KOG0057|consen 33 FPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNP-AVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSS 111 (591)
T ss_pred HHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCc-chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444446677777778899998764211111 11122223344455556677788899999999999999999999
Q ss_pred HHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 000830 139 AYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFI-IGFARVWQISLVTLSIVPLIAL 217 (1265)
Q Consensus 139 ~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~l~l~~l~~~p~~~~ 217 (1265)
++|.|++.+++++|.+ ..+|++.+.+..-...|..++...+..++..++-+..... +..-..+..+++.+..+..+..
T Consensus 112 ~vf~~~~~ld~~~~~~-~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a 190 (591)
T KOG0057|consen 112 DVFRHLMSLDLSFFLS-RGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAA 190 (591)
T ss_pred HHHHHHHhhhHHhhcC-CCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhe
Confidence 9999999999999987 5899999999999999999988777777666655444332 2233455566666655555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 218 AGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLF 297 (1265)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1265)
+.........+..++..++..+.++.+-|++.|..+||+||.|+++.++|.....++.+...+.....++....-..+..
T Consensus 191 ~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFs 270 (591)
T KOG0057|consen 191 FTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFS 270 (591)
T ss_pred eEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHH
Confidence 55556666667777888888899999999999999999999999999999999999999888877776666555445555
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCC
Q 000830 298 LSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDK 377 (1265)
Q Consensus 298 ~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~ 377 (1265)
...+.+++.|..-+.++.++.|.++.......++..|+..+...+..+.++..-+...+...+....+.. ...+...
T Consensus 271 v~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~---~~~~i~~ 347 (591)
T KOG0057|consen 271 VALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQE---AALPIEL 347 (591)
T ss_pred HHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhh---ccCCccc
Confidence 5555666667766788899999877665555566678877887888888777777666655433222111 1123344
Q ss_pred CcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHh
Q 000830 378 LSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLR 457 (1265)
Q Consensus 378 ~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 457 (1265)
.++.|+|+||+|+|++ ++++|+++||+|++||++||||+|||||||++++|.||++ ++|+|+|||+|+++++++++|
T Consensus 348 ~~~~I~F~dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR 424 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLR 424 (591)
T ss_pred CCCcEEEEeeEEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhh
Confidence 5678999999999973 4569999999999999999999999999999999999999 999999999999999999999
Q ss_pred hheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 458 QQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
+.|||||||..||++||.+||.||+|.++++++.++||.++.||-+.++|+||+|.+||+|..||||||||||||||+++
T Consensus 425 ~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lK 504 (591)
T KOG0057|consen 425 QSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLK 504 (591)
T ss_pred hheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHH
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALV 617 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 617 (1265)
||||++||||||+||.+||+.+.+.+.+...+||+|+|.||++++++||+|+++++|++.|.|+|+||++ +.+.|+.+|
T Consensus 505 da~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w 583 (591)
T KOG0057|consen 505 DAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLW 583 (591)
T ss_pred CCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHh
Confidence 9999999999999999999999999999888999999999999999999999999999999999999999 589999999
Q ss_pred HHHH
Q 000830 618 QLQE 621 (1265)
Q Consensus 618 ~~~~ 621 (1265)
..|.
T Consensus 584 ~~~~ 587 (591)
T KOG0057|consen 584 TTQT 587 (591)
T ss_pred cccc
Confidence 7653
No 41
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.4e-79 Score=769.08 Aligned_cols=564 Identities=31% Similarity=0.468 Sum_probs=502.3
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 45 KLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSC 124 (1265)
Q Consensus 45 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1265)
+++++.++++ ..++++++++++.+++.+..+.+++.++|...... ....+......++++.++..++.++..++
T Consensus 4 ~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (571)
T TIGR02203 4 RLWSYVRPYK-AGLVLAGVAMILVAATESTLAALLKPLLDDGFGGR-----DRSVLWWVPLVVIGLAVLRGICSFVSTYL 77 (571)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-----chhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555443 34567777788888888888888888888654311 11222223334555566677888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 125 WMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQI 204 (1265)
Q Consensus 125 ~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 204 (1265)
....+.++..++|..+++++++.|.++|++ .++|++++|+++|++.+++++...+..++.+++.+++.++++++++|.+
T Consensus 78 ~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~-~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l 156 (571)
T TIGR02203 78 LSWVSNKVVRDIRVRMFEKLLGLPVSFFDR-QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQL 156 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 999999999999999999999999999987 5899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 205 SLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLA 284 (1265)
Q Consensus 205 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1265)
++++++.+|+.+++..++.++.++..++.++..++..+.+.|.++|+++||.++.|+.+.++|++..++..+...+..+.
T Consensus 157 ~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (571)
T TIGR02203 157 TLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSA 236 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccc
Q 000830 285 KGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTM 364 (1265)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~ 364 (1265)
.+....+..++..+..++++++|++++..|.++.|.++++..++.....|+..+...+..+.+++.+.+|+.++++.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~ 316 (571)
T TIGR02203 237 GSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPE 316 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88888777777777888888999999999999999999988888888889999999999999999999999999976544
Q ss_pred cccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEEC
Q 000830 365 SKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLD 444 (1265)
Q Consensus 365 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~ 444 (1265)
.+.. .....+..+.|+++||+|+|+++ +.++|+|+||++++||+++|+|+||||||||+++|+|+|+|++|+|.+|
T Consensus 317 ~~~~---~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~ 392 (571)
T TIGR02203 317 KDTG---TRAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLD 392 (571)
T ss_pred CCCC---CCCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEEC
Confidence 3211 11112234679999999999754 3579999999999999999999999999999999999999999999999
Q ss_pred CeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCC-CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCCh
Q 000830 445 GNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKD-DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSG 523 (1265)
Q Consensus 445 g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 523 (1265)
|+++++++.+++|++|+||||+|++|++||+|||.++.+ +.++++++++++.+++++++.++|+|+||.+||+|.+|||
T Consensus 393 g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSg 472 (571)
T TIGR02203 393 GHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSG 472 (571)
T ss_pred CEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCH
Confidence 999999999999999999999999999999999999986 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcc
Q 000830 524 GQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHE 603 (1265)
Q Consensus 524 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~ 603 (1265)
||||||+||||++++|+|||||||||+||+++++.+.+.|.+..+++|+|+||||++.++.||+|++|++|++++.|+|+
T Consensus 473 GqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~ 552 (571)
T TIGR02203 473 GQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHN 552 (571)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred hhccCCchHHHHHHHHH
Q 000830 604 ELISNPNSAYAALVQLQ 620 (1265)
Q Consensus 604 ~l~~~~~~~~~~~~~~~ 620 (1265)
+++++ ++.|++++..+
T Consensus 553 ~l~~~-~~~~~~~~~~~ 568 (571)
T TIGR02203 553 ELLAR-NGLYAQLHNMQ 568 (571)
T ss_pred HHHHc-CCHHHHHHHHh
Confidence 99987 78898887654
No 42
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.8e-79 Score=780.62 Aligned_cols=566 Identities=26% Similarity=0.391 Sum_probs=490.1
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 684 AIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFG 763 (1265)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 763 (1265)
+.+++...+++++.+...++++++..++....++.+...++...... .......+.+.++++.++..++.+++.++..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~--~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~ 204 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHR--GLSTLSVLALAMLAVAIFEPALGGLRTYLFA 204 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555566655555555554444444444444444444332111 1112233344555556667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 764 IMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRIT 843 (1265)
Q Consensus 764 ~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 843 (1265)
..+.++..++|.++|+++++.|+.||++ .++|++++|+ +|++.+++++...+..++..+..+++.++++++++|.++
T Consensus 205 ~~~~~~~~~l~~~~~~~l~~l~~~~f~~--~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 281 (694)
T TIGR01846 205 HLTSRIDVELGARLYRHLLGLPLGYFES--RRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLT 281 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHcCC--CCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999996 8999999999 699999999988887777777777777888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000830 844 LVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIA 923 (1265)
Q Consensus 844 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1265)
+++++.+|+.++..+...+..++...+..+...+..+.+.|+++|+++||++|.|+.+.++|.+..++..+...+..+..
T Consensus 282 li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (694)
T TIGR01846 282 GVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLG 361 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888877777777777667777778888899999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 000830 924 GIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQV 1003 (1265)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 1003 (1265)
.....+..++..+..++.+|+|.+++..+.++.|.++++..+......++..+......+..+..+.+|+.++++.+++.
T Consensus 362 ~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~ 441 (694)
T TIGR01846 362 NIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEP 441 (694)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 88888888888888899999999999999999999998888888888899999999999999999999999999876553
Q ss_pred cCCCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcc
Q 000830 1004 IGDIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGID 1083 (1265)
Q Consensus 1004 ~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~d 1083 (1265)
........+...|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|
T Consensus 442 ~~~~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~ 520 (694)
T TIGR01846 442 RSAGLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVD 520 (694)
T ss_pred cCCCCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEe
Confidence 321111123345789999999999743 3468999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1084 IKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1084 i~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
+++++.+++|++++||||||.+|+|||||||.++.++.+++++++|++.+++++++.++|+||||.+||+|.+|||||||
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~q 600 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQ 600 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHH
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|++||||++++|+|||||||||+||++||+.+.+.|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|+||++
T Consensus 601 ri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~ 680 (694)
T TIGR01846 601 RIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLA 680 (694)
T ss_pred HHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999998
Q ss_pred cCCcHHHHHHHHh
Q 000830 1244 NEDGAYFKLINLQ 1256 (1265)
Q Consensus 1244 ~~~g~f~~l~~~~ 1256 (1265)
.+|.|++|++.|
T Consensus 681 -~~~~y~~l~~~~ 692 (694)
T TIGR01846 681 -LQGLYARLWQQQ 692 (694)
T ss_pred -cCChHHHHHHhh
Confidence 689999999865
No 43
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.8e-79 Score=760.23 Aligned_cols=565 Identities=26% Similarity=0.335 Sum_probs=484.9
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 43 LFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEV 122 (1265)
Q Consensus 43 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1265)
+++++++.+++++ .++++++++++..++.+..|++++.++|.+.... . .. ...+.++++.++.++..++..
T Consensus 7 ~~~l~~~l~~~k~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~----~---~~-~~~~~~~~~~~~~~~~~~~~~ 77 (585)
T TIGR01192 7 YVRALSYLNVHKN-RVLLIVIANITLAAITIAEPILFGRIIDAISSKS----D---VL-PTLALWAGFGVFNTIAYVLVA 77 (585)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----c---HH-HHHHHHHHHHHHHHHHHHHHH
Confidence 5667777776644 4456677777778888888889999999764311 1 11 111112222233334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 123 SCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVW 202 (1265)
Q Consensus 123 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 202 (1265)
++......++..++|.++|+|++++|++||++ .++|++++|+++|++.+++++...+..++..++.+++.+++++.++|
T Consensus 78 ~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~-~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 156 (585)
T TIGR01192 78 READRLAHGRRATLLTEAFGRIISMPLSWHQQ-RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDW 156 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555556666677789999999999999997 58999999999999999999998888888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000830 203 QISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAG 282 (1265)
Q Consensus 203 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 282 (1265)
.+++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.+++++..++..+...+..
T Consensus 157 ~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (585)
T TIGR01192 157 RLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVL 236 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888889999988888889999999999999999999999999999999999999988888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccc
Q 000830 283 LAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERD 362 (1265)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 362 (1265)
+..++...+..++..+..++++++|++++.+|.++.|.+++++.+......|+..+...+..+..++.+.+|+.++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~ 316 (585)
T TIGR01192 237 DWWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSV 316 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77777767666677777778889999999999999999988877777777788888889999999999999999999765
Q ss_pred cccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEE
Q 000830 363 TMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEIL 442 (1265)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 442 (1265)
++.+.. ......+...+.|+++||+|+|+++ .++|+|+||++++||++||+||||||||||+++|+|+|+|++|+|.
T Consensus 317 ~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 393 (585)
T TIGR01192 317 FQREEP-ADAPELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQIL 393 (585)
T ss_pred ccccCC-ccCCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEE
Confidence 432211 1111112234579999999999742 3589999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCC
Q 000830 443 LDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLS 522 (1265)
Q Consensus 443 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 522 (1265)
+||+++++++.+++|++++||+|+|++|++|++|||.++.++.+++++.++++.+++++++.++|+|++|.+|++|.+||
T Consensus 394 ~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LS 473 (585)
T TIGR01192 394 IDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLS 473 (585)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCc
Q 000830 523 GGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSH 602 (1265)
Q Consensus 523 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 602 (1265)
|||||||+|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||+++++.||+|++|++|++++.|+|
T Consensus 474 gGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~ 553 (585)
T TIGR01192 474 GGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSF 553 (585)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred chhccCCchHHHHHHHHHH
Q 000830 603 EELISNPNSAYAALVQLQE 621 (1265)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~~ 621 (1265)
++++++ ++.|++++..+.
T Consensus 554 ~~l~~~-~~~y~~l~~~~~ 571 (585)
T TIGR01192 554 QELIQK-DGRFYKLLRRSG 571 (585)
T ss_pred HHHHHC-CChHHHHHHhCc
Confidence 999987 789999987653
No 44
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=7.7e-80 Score=762.71 Aligned_cols=525 Identities=22% Similarity=0.277 Sum_probs=447.7
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 45 KLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSC 124 (1265)
Q Consensus 45 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1265)
+++++.+++++. ++++++++++..++....|++++.++|...... . ..........++++.++..++.++..++
T Consensus 3 ~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (529)
T TIGR02868 3 RILPLLQPRTRR-LVVAILLGALALGSAVALLGVSAWLISRAAEMP----P-VLYLSVAAVAVRAFGIGRAVFRYLERLV 76 (529)
T ss_pred hHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----h-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666655443 445566666666667777778999998754211 1 0001111111223344566777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 125 WMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQI 204 (1265)
Q Consensus 125 ~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 204 (1265)
....+.++..++|.++|+|++++|+++|++ .++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.+
T Consensus 77 ~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~-~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 155 (529)
T TIGR02868 77 GHDAALRSLGRLRVRVYDRLARLALAGRRR-FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPA 155 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcccccc-CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 888999999999999999999999999987 5899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 205 SLVTLSIVPLIALAGGMYAYV-TIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGL 283 (1265)
Q Consensus 205 ~l~~l~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 283 (1265)
++++++.+|++.++...+.++ .++..++.++..++..+.+.|.++|+++||+|++|+.+.++|++..++..+...+..+
T Consensus 156 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (529)
T TIGR02868 156 ALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAAR 235 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888876665444444 4556677788889999999999999999999999999999999999999999899888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 000830 284 AKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDT 363 (1265)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~ 363 (1265)
..+...++..++..+..++++++|++++.+|.++.|.+++++.+......++..+...+..+.++.++.+|+.++++.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 315 (529)
T TIGR02868 236 ATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKG 315 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88888777777777777888899999999999999998888777777777888888889999999999999999998665
Q ss_pred cccccccc-CCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEE
Q 000830 364 MSKASSKT-GRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEIL 442 (1265)
Q Consensus 364 ~~~~~~~~-~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 442 (1265)
+.+..... .....+..+.|+|+||+|+|+++ +++|+|+||+++|||++|||||||||||||+++|+|+|+|++|+|.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~ 393 (529)
T TIGR02868 316 PRPEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVT 393 (529)
T ss_pred CcCCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Confidence 42211110 01112234579999999999753 3599999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCC
Q 000830 443 LDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLS 522 (1265)
Q Consensus 443 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 522 (1265)
+||+|++++ .+++|++|+||||+|+||++||+|||++|.|+++++++++|++.+++++++.+||+||||.+||+|.+||
T Consensus 394 i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LS 472 (529)
T TIGR02868 394 LDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLS 472 (529)
T ss_pred ECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCC
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCc
Q 000830 523 GGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRL 579 (1265)
Q Consensus 523 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l 579 (1265)
||||||||||||++++|+|||||||||+||+++|+.|++.+.++.+++|+|+||||+
T Consensus 473 GGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 473 GGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999999999988899999999996
No 45
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=7.2e-79 Score=762.27 Aligned_cols=567 Identities=27% Similarity=0.373 Sum_probs=481.6
Q ss_pred HhHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000830 41 VSLFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWI 120 (1265)
Q Consensus 41 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (1265)
..+++++++.++++ ..+.+.++++++..++.+..|++++.++|.+... . ......+.+++++++..+..++
T Consensus 5 ~~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~ 75 (588)
T PRK13657 5 RLYARVLQYLGAEK-RLGILLAVANVLLAAATFAEPILFGRIIDAISGK----G----DIFPLLAAWAGFGLFNIIAGVL 75 (588)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----c----cHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777665543 3345556666666677777777889999976431 1 1111112222222333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 121 EVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFAR 200 (1265)
Q Consensus 121 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 200 (1265)
..++..+...++..++|.++|+|++++|+.+|++ .++|++++|+++|++.+.+.+...+..++..++.+++.+++++++
T Consensus 76 ~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (588)
T PRK13657 76 VARHADRLAHRRRLAVLTEYFERIIQLPLAWHSQ-RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFM 154 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCc-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455556666667779999999999999987 589999999999999999988888888888888888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 000830 201 VWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRK 280 (1265)
Q Consensus 201 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~ 280 (1265)
+|.+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||.|+.++.+.++|.+..++..+...+
T Consensus 155 ~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (588)
T PRK13657 155 NWRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMP 234 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998899888888888888888899999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Q 000830 281 AGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIE 360 (1265)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~ 360 (1265)
.....+....+..++..+..++++++|++++.+|.+++|.+++++.+......|+..+...+..+..+..+.+|+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~ 314 (588)
T PRK13657 235 VLSWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVED 314 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 87777777766667777777788899999999999999999888777777777888888889999999999999999987
Q ss_pred cccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcce
Q 000830 361 RDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGE 440 (1265)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 440 (1265)
.+++.+.. ..........+.|+++||+|+|+++ .++|+|+||+++|||+++|+|+||||||||+++|+|+|+|++|+
T Consensus 315 ~~~~~~~~-~~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~ 391 (588)
T PRK13657 315 AVPDVRDP-PGAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGR 391 (588)
T ss_pred CCcccCCC-CCCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCE
Confidence 65432211 1111112234579999999999742 45999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCC
Q 000830 441 ILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQ 520 (1265)
Q Consensus 441 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 520 (1265)
|.+||+++++++.+++|++|+||||+|++|++||+|||++++|+.+++++.++++.+++++++..+|+|+||.+|++|.+
T Consensus 392 I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~ 471 (588)
T PRK13657 392 ILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQ 471 (588)
T ss_pred EEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEee
Q 000830 521 LSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 521 LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 600 (1265)
|||||||||+|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|++++.|
T Consensus 472 LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g 551 (588)
T PRK13657 472 LSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESG 551 (588)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999999887899999999999999999999999999999999
Q ss_pred CcchhccCCchHHHHHHHHHH
Q 000830 601 SHEELISNPNSAYAALVQLQE 621 (1265)
Q Consensus 601 ~~~~l~~~~~~~~~~~~~~~~ 621 (1265)
+|+++++. ++.|++++..+.
T Consensus 552 ~~~~l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 552 SFDELVAR-GGRFAALLRAQG 571 (588)
T ss_pred CHHHHHHC-CChHHHHHHHhh
Confidence 99999987 789999887553
No 46
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-79 Score=691.62 Aligned_cols=507 Identities=24% Similarity=0.346 Sum_probs=430.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHH
Q 000830 742 ILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTIL 821 (1265)
Q Consensus 742 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~ 821 (1265)
...=++++...+..+...+..+.+..++...+|.++|+++...+..-..+ -.+|+++||+..|++.+|+.+-..+..+
T Consensus 62 a~VR~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r--~r~gdLL~RLvaDVd~Ld~lyLRvi~P~ 139 (573)
T COG4987 62 AGVRGLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLR--YRSGDLLNRLVADVDALDNLYLRVIAPA 139 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHh--cChHhHHHHHHhhHHHHhhHHHHHHhhH
Confidence 33445566677778888888888999999999999999999888776665 7799999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHH
Q 000830 822 IQNFGLVTASFVIAFILNWRITLVVVATY-PLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDK 900 (1265)
Q Consensus 822 i~~~~~~~~~~~~~~~~~~~l~lv~l~~~-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~ 900 (1265)
+..+..+.+..+...+++|.+++.+...+ .+.++..++..++-++..++.........+++.|.+.|....+.||.++.
T Consensus 140 ~~a~~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~ 219 (573)
T COG4987 140 VVALVLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDA 219 (573)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHH
Confidence 88888777777777788888887654433 33344445555666777777777788888999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHH-H
Q 000830 901 VLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYG-LALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETL-A 978 (1265)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 978 (1265)
+.+.+......+.+...+..++.++...+.+++..+... ..+|.+ .....|..+...+....+..+....++..+. .
T Consensus 220 ~~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a-~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~ 298 (573)
T COG4987 220 YRTALEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMA-AQVGAGALAQPGAALALLVIFAALEAFEPLAPG 298 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCcCCCcchhHHHHHHHHHHHHHHHHhhhcch
Confidence 999999999999999999999988888888887777666 444444 3344454443333222222222222333333 4
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCC
Q 000830 979 LVPDLLKGNQMAASVFEVLDRKTQVIGDIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSG 1058 (1265)
Q Consensus 979 ~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSG 1058 (1265)
.+.+......+++|+.++.+.+++...+ .++.+..+..++++||+|+||++ .+++|+|+||++++||||||+||||||
T Consensus 299 A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~-~~~~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsG 376 (573)
T COG4987 299 AFQHLGQVIASARRLNDILDQKPEVTFP-DEQTATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSG 376 (573)
T ss_pred hHHHhhHHHHHHHHHhhhccCCcccCCC-ccccCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCC
Confidence 4566777888999999999888776544 12122222279999999999975 457999999999999999999999999
Q ss_pred hHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHH
Q 000830 1059 KSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSF 1138 (1265)
Q Consensus 1059 KSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~ 1138 (1265)
|||++++|.|-|+|++|+|..+|+|++.++.+++|..|++++|.++||++|+|+||..++|++||||+|+|+++++++++
T Consensus 377 KSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l 456 (573)
T COG4987 377 KSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKL 456 (573)
T ss_pred HHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhh
Q 000830 1139 ISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTI 1218 (1265)
Q Consensus 1139 i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti 1218 (1265)
+++.|+||+|.+||+|.+||||||||++|||+||+|.+++||||||.+||++||+.|.+.|.+..+|||+|+||||+..+
T Consensus 457 ~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~l 536 (573)
T COG4987 457 LESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGL 536 (573)
T ss_pred HHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHH
Q 000830 1219 KNADQISVIESGKIIEQGTHSSLVENEDGAYFKLIN 1254 (1265)
Q Consensus 1219 ~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~ 1254 (1265)
..||||+||++|+++|+|+|.+|++ .+|.|++|++
T Consensus 537 e~~drIivl~~Gkiie~G~~~~Ll~-~~g~~~~l~q 571 (573)
T COG4987 537 ERMDRIIVLDNGKIIEEGTHAELLA-NNGRYKRLYQ 571 (573)
T ss_pred hhcCEEEEEECCeeeecCCHHhhhc-cccHHHHHhc
Confidence 9999999999999999999999999 7999999985
No 47
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.8e-79 Score=757.29 Aligned_cols=543 Identities=24% Similarity=0.339 Sum_probs=473.0
Q ss_pred hhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Q 000830 70 VSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDI 149 (1265)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~ 149 (1265)
++....|++++.++|.+.... . . ...+..+...++++.++..++.++..++....+.++..++|.++|++++++|+
T Consensus 9 ~~~~~~p~~~~~iid~~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 84 (569)
T PRK10789 9 MLQLIPPKVVGIIVDGVTEQH--M-T-TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHP 84 (569)
T ss_pred HHHHHHHHHHHHHHHHhccCC--c-c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 334445557889998754211 0 1 11122233334444455666777878888888999999999999999999999
Q ss_pred hhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 150 SLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIG-FARVWQISLVTLSIVPLIALAGGMYAYVTIG 228 (1265)
Q Consensus 150 ~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~ 228 (1265)
++|++ .++|++++|+++|++.++..+...+..++..++.+++.++++ ++++|.+++++++++|+++++...+.++.++
T Consensus 85 ~~~~~-~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 85 EFYLR-HRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHcC-CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 589999999999999999888888888888766666666555 5899999999999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 229 LIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVS 308 (1265)
Q Consensus 229 ~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 308 (1265)
..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+..++..+...+..+..+...++...+..+..++++++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888888888888777777666666667777888999
Q ss_pred HHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCcccEEEEeEE
Q 000830 309 VVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVS 388 (1265)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~ 388 (1265)
+++.+|.++.|.++++..+......|+..+...+..+.+++++.+|+.++++.+++.+.. ....+...+.|+++||+
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~---~~~~~~~~~~I~~~~v~ 320 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDG---SEPVPEGRGELDVNIRQ 320 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC---CCCCCCCCCcEEEEEEE
Confidence 999999999999998887777777888888999999999999999999999865432211 11112234579999999
Q ss_pred EECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCc
Q 000830 389 FCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPA 468 (1265)
Q Consensus 389 f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~ 468 (1265)
|+|++. +.++|+|+||+++||++++|+||||||||||+++|+|+|+|++|+|.+||+++.+++..++|++|+||+|+|+
T Consensus 321 ~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~ 399 (569)
T PRK10789 321 FTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF 399 (569)
T ss_pred EECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCe
Confidence 999753 3569999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcC
Q 000830 469 LFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEAT 548 (1265)
Q Consensus 469 lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~t 548 (1265)
+|++|++|||+++.++.++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+||||||||
T Consensus 400 lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpt 479 (569)
T PRK10789 400 LFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDAL 479 (569)
T ss_pred eccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcc
Confidence 99999999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHHHHH
Q 000830 549 SALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQLQEA 622 (1265)
Q Consensus 549 s~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 622 (1265)
|+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+|++++++ ++.|++++..|..
T Consensus 480 s~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 480 SAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 999999999999999998889999999999999999999999999999999999999987 7899999987653
No 48
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-79 Score=694.24 Aligned_cols=514 Identities=28% Similarity=0.417 Sum_probs=438.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHH
Q 000830 738 KKITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDR 817 (1265)
Q Consensus 738 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~ 817 (1265)
......|+++.+...++.-++.+.+.++.++..++.-.++|.+.++.+.+||.+ ..+|.+.+.+.+....+...+.-.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~--~~tG~l~~~idRgsraI~~vl~~~ 151 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLS--RGTGALNRIIDRGSRAISFVLSAM 151 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcC--CCcchHHHHHHhhhhHHHHHHHHH
Confidence 345677888888899999999999999999999999999999999999999996 678999999999998888888777
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhc
Q 000830 818 STILIQNFGLVTASFV-IAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFC 896 (1265)
Q Consensus 818 ~~~~i~~~~~~~~~~~-~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~ 896 (1265)
+..++..++.+..... +..-.++..+++.+..+.....+.+....+..++.++..++...+.+.+.+++.|-++||+||
T Consensus 152 V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfN 231 (591)
T KOG0057|consen 152 VFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFN 231 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcc
Confidence 7766666555444432 333345555555555554444444444444455555667777888899999999999999999
Q ss_pred cHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHH
Q 000830 897 SEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGET 976 (1265)
Q Consensus 897 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 976 (1265)
.|++..++|...+.+..+...+.....++......++.....+.+.+.+..=+..+.++++.++...........++..+
T Consensus 232 nE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~L 311 (591)
T KOG0057|consen 232 NEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFL 311 (591)
T ss_pred cHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHH
Confidence 99999999999999999988888877777777777776677777777887777788899999888777777778888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCC
Q 000830 977 LALVPDLLKGNQMAASVFEVLDRKTQVIGDIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSG 1056 (1265)
Q Consensus 977 ~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SG 1056 (1265)
.....++.++..-.+..+...+....... .+.+....+|.|+|+||+|.|+ |++++|+++||+|++||||||||+||
T Consensus 312 g~vyr~~~q~l~Dm~~~~~l~~~~~~i~~-~~~~i~~~~~~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nG 388 (591)
T KOG0057|consen 312 GSVYRELRQALTDMRTLFILLEVDEDIQE-AALPIELFGGSIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNG 388 (591)
T ss_pred HHHHHHHHHHHHhHHHHHhhhhhhhhhhh-ccCCcccCCCcEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECCCC
Confidence 77777777776666655554332211111 1112223467899999999997 44569999999999999999999999
Q ss_pred CChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchH
Q 000830 1057 SGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAH 1136 (1265)
Q Consensus 1057 SGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~ 1136 (1265)
|||||++++|+||+| ++|+|+|||+||++++++.+|+.|||||||.+||++||-+||.||++.+++||+.++||++++|
T Consensus 389 sGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~h 467 (591)
T KOG0057|consen 389 SGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLH 467 (591)
T ss_pred CCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcH
Confidence 999999999999999 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCch
Q 000830 1137 SFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLS 1216 (1265)
Q Consensus 1137 ~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ 1216 (1265)
|.+.++|+||+|.|||+|..||||||||++||||++++|+|+++|||||+||.+||+.+.+.|.....+||+|+|+||++
T Consensus 468 d~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ 547 (591)
T KOG0057|consen 468 DVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLD 547 (591)
T ss_pred HHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHHHhhc
Q 000830 1217 TIKNADQISVIESGKIIEQGTHSSLVENEDGAYFKLINLQQR 1258 (1265)
Q Consensus 1217 ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~~~~~ 1258 (1265)
++++||+|++|++|+|+|.|+|+||++ +.+.|..+|..|..
T Consensus 548 ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 548 LLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQTS 588 (591)
T ss_pred hHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccccc
Confidence 999999999999999999999999999 89999999987643
No 49
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.5e-78 Score=758.17 Aligned_cols=570 Identities=35% Similarity=0.498 Sum_probs=490.6
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 43 LFKLFAFADFYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEV 122 (1265)
Q Consensus 43 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1265)
++.++++.+++++ .+.+.+++.++.+++....|++++.++|.+.... . ...+.....+++++.++..++.+++.
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (576)
T TIGR02204 6 LAALWPFVRPYRG-RVLAALVALLITAAATLSLPYAVRLMIDHGFSKD----S-SGLLNRYFAFLLVVALVLALGTAARF 79 (576)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc----c-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555433 3455666677777777778889999999743211 1 11122223333444445566677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 123 SCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVW 202 (1265)
Q Consensus 123 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 202 (1265)
++....+.++..++|..+++++++.|.++|++ .+.|++++|+++|++.+++++...+..++..++.+++.+++++.++|
T Consensus 80 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~-~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (576)
T TIGR02204 80 YLVTWLGERVVADIRRAVFAHLISLSPSFFDK-NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSP 158 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcc-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 88888999999999999999999999999987 58899999999999999999988888989999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000830 203 QISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAG 282 (1265)
Q Consensus 203 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 282 (1265)
.+++++++.+|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..
T Consensus 159 ~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (576)
T TIGR02204 159 KLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRI 238 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998889888888889999999999999999999999999999999999999999999999999988888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccc
Q 000830 283 LAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERD 362 (1265)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 362 (1265)
+.......+..++..+..++++++|++.+..|.++.|.++++..+......|+..+...+..+.+++.+.+|+.++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~ 318 (576)
T TIGR02204 239 RTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAE 318 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77666666555555566667778899999999999999888877777777889999999999999999999999999765
Q ss_pred cccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEE
Q 000830 363 TMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEIL 442 (1265)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 442 (1265)
++.+..........+..+.|+++||+|+|+++.++++|+|+||+++|||+++|+||||||||||+++|+|+|+|++|+|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~ 398 (576)
T TIGR02204 319 PDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRIL 398 (576)
T ss_pred CcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEE
Confidence 43221111111111234579999999999854335799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCC
Q 000830 443 LDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLS 522 (1265)
Q Consensus 443 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 522 (1265)
+||.++.+++.+++|++|+||||+|++|++||+|||.++.|+.++++++++++.+++.+++..+|+|++|.+||+|.+||
T Consensus 399 i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LS 478 (576)
T TIGR02204 399 LDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLS 478 (576)
T ss_pred ECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCC
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCc
Q 000830 523 GGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSH 602 (1265)
Q Consensus 523 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 602 (1265)
||||||++||||++++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.++.||+|++|++|++++.|+|
T Consensus 479 gGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~ 558 (576)
T TIGR02204 479 GGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTH 558 (576)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred chhccCCchHHHHHHHHH
Q 000830 603 EELISNPNSAYAALVQLQ 620 (1265)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~ 620 (1265)
++++++ ++.|++++..|
T Consensus 559 ~~l~~~-~~~~~~l~~~~ 575 (576)
T TIGR02204 559 AELIAK-GGLYARLARLQ 575 (576)
T ss_pred HHHHHc-CChHHHHHhhc
Confidence 999886 78999887654
No 50
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.7e-78 Score=757.58 Aligned_cols=565 Identities=30% Similarity=0.466 Sum_probs=501.0
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 686 KLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIM 765 (1265)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 765 (1265)
.++.+.+++++.+..+.+++++.+++.+..++.+...++..+... .......+..+++++.++..++.+++.++....
T Consensus 4 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 81 (571)
T TIGR02203 4 RLWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGR--DRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWV 81 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777777777777777777666666666655554333211 111222233455666677788888899999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 766 GERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLV 845 (1265)
Q Consensus 766 ~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv 845 (1265)
+.++..++|..+++++++.|.++|++ .++|++++|+++|++.++..+...+..++..++.++++++++++++|.++++
T Consensus 82 ~~~~~~~lr~~l~~~~~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i 159 (571)
T TIGR02203 82 SNKVVRDIRVRMFEKLLGLPVSFFDR--QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLI 159 (571)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000830 846 VVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGI 925 (1265)
Q Consensus 846 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1265)
+++..|+.++..++..+..+....+..+...+..+.+.|.++|+++||+++.++++.++|.+..++..+...+..+..+.
T Consensus 160 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (571)
T TIGR02203 160 VVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSI 239 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888888777777788888888899999999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccC
Q 000830 926 FYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIG 1005 (1265)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~ 1005 (1265)
...+..++..+...+.+++|..++..+.++++.++++..+......++..+......+..+..+.+|+.++++.+++...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 319 (571)
T TIGR02203 240 SSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDT 319 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 88888888888889999999999999999999999999988889999999999999999999999999999876554322
Q ss_pred CCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccC
Q 000830 1006 DIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIK 1085 (1265)
Q Consensus 1006 ~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~ 1085 (1265)
.. ....+..+.|+++||+|+|+++ +.++|+|+||+|+|||+++|+|+||||||||+++|.|+|+|++|+|++||+|++
T Consensus 320 ~~-~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~ 397 (571)
T TIGR02203 320 GT-RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLA 397 (571)
T ss_pred CC-CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHH
Confidence 11 1112235689999999999754 357999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccEEEecCCCCCcccHHHHhccCCC-CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000830 1086 RLNLKSLRKHIALVQQEPALFATSIYENILYGKD-GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQR 1164 (1265)
Q Consensus 1086 ~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~-~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQr 1164 (1265)
+++.+++|++++||||+|++|+|||||||.++.+ +.++++++++++.+++++++.++|+||||.+||+|.+||||||||
T Consensus 398 ~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQR 477 (571)
T TIGR02203 398 DYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQR 477 (571)
T ss_pred hcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHH
Confidence 9999999999999999999999999999999886 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhc
Q 000830 1165 VAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1165 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
||||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++.+..||+|++|++|++++.|+|++|++
T Consensus 478 iaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~- 556 (571)
T TIGR02203 478 LAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLA- 556 (571)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHH-
Confidence 9999999999999999999999999999999999999989999999999999999999999999999999999999998
Q ss_pred CCcHHHHHHHHhh
Q 000830 1245 EDGAYFKLINLQQ 1257 (1265)
Q Consensus 1245 ~~g~f~~l~~~~~ 1257 (1265)
.++.|+++++.+.
T Consensus 557 ~~~~~~~~~~~~~ 569 (571)
T TIGR02203 557 RNGLYAQLHNMQF 569 (571)
T ss_pred cCCHHHHHHHHhh
Confidence 5789999988653
No 51
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.7e-77 Score=749.82 Aligned_cols=564 Identities=27% Similarity=0.391 Sum_probs=474.0
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 684 AIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFG 763 (1265)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 763 (1265)
++++..+.++++..+.+..++.++..+.....++.+..+++..... .......++++++.++..+..++..++..
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (588)
T PRK13657 7 YARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGK-----GDIFPLLAAWAGFGLFNIIAGVLVARHAD 81 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566667776666666666655555555555555555443211 11111222233333333333444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 764 IMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRIT 843 (1265)
Q Consensus 764 ~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 843 (1265)
+...+...+++.++|+++++.|..+|++ .++|++++|+++|++.+...+...+..++..++..++.+++++.++|.++
T Consensus 82 ~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 159 (588)
T PRK13657 82 RLAHRRRLAVLTEYFERIIQLPLAWHSQ--RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLS 159 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHCc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666667779999999999999986 78999999999999999988888888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000830 844 LVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIA 923 (1265)
Q Consensus 844 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1265)
+++++.+|+.++......+..+....+..+......+.+.|.++|+++||+|+.++.+.+++.+..++..+...+.....
T Consensus 160 l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (588)
T PRK13657 160 LVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWW 239 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888877766666666666666667777888899999999999999999999999999999999888888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 000830 924 GIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQV 1003 (1265)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 1003 (1265)
.....+.+++......+++++|.+++..|.++++.+++...+......++..+...+..+..+..+.+|+.++.+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~ 319 (588)
T PRK13657 240 ALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDV 319 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 77777788888888888899999999999999999998888888888888888888999999999999999988765442
Q ss_pred cCCCC-cccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCc
Q 000830 1004 IGDIG-EELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGI 1082 (1265)
Q Consensus 1004 ~~~~~-~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~ 1082 (1265)
..... ...++..+.|+++||+|+|+++ +++|+|+||+++|||++||||+||||||||+++|+|+|+|++|+|++||+
T Consensus 320 ~~~~~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~ 397 (588)
T PRK13657 320 RDPPGAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGT 397 (588)
T ss_pred CCCCCCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCE
Confidence 21111 1112234679999999999743 45899999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1083 DIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1083 di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
|+++++.+++|++|+||||||.+|+|||||||.+++++.+|++++++++.+++++++.++|+|+||.+|++|.+||||||
T Consensus 398 ~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~ 477 (588)
T PRK13657 398 DIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGER 477 (588)
T ss_pred EhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
|||||||||+++|+|||||||||+||++||+.+.+.|++..+++|+|+||||++.++.||+|++|++|+++|.|+|++|+
T Consensus 478 QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~ 557 (588)
T PRK13657 478 QRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELV 557 (588)
T ss_pred HHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hcCCcHHHHHHHHhh
Q 000830 1243 ENEDGAYFKLINLQQ 1257 (1265)
Q Consensus 1243 ~~~~g~f~~l~~~~~ 1257 (1265)
+ .++.|+++++.+.
T Consensus 558 ~-~~~~y~~l~~~~~ 571 (588)
T PRK13657 558 A-RGGRFAALLRAQG 571 (588)
T ss_pred H-CCChHHHHHHHhh
Confidence 8 5899999998664
No 52
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.4e-77 Score=742.49 Aligned_cols=520 Identities=21% Similarity=0.252 Sum_probs=438.7
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 687 LYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKI--TILFCCAAVITVIVHAIEHLSFGI 764 (1265)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~ 764 (1265)
++++.+++++.+..+.+++++........++.+...++...... .....+ ...+.++.++..++.++..++...
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (529)
T TIGR02868 4 ILPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMP----PVLYLSVAAVAVRAFGIGRAVFRYLERLVGHD 79 (529)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666665555555544444555555554332110 011111 111223445566777788888888
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 765 MGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITL 844 (1265)
Q Consensus 765 ~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~l 844 (1265)
.+.++..++|.++|+++++.|..||++ +++|++++|+++|++.++..+...+..++..+..++++++++++++|.+++
T Consensus 80 ~~~~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 157 (529)
T TIGR02868 80 AALRSLGRLRVRVYDRLARLALAGRRR--FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAAL 157 (529)
T ss_pred HHHHHHHHHHHHHHHHhhccCcccccc--CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999986 889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000830 845 VVVATYPLIISGH-ISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIA 923 (1265)
Q Consensus 845 v~l~~~pl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1265)
++++.+|++.+.. ++..+..+...++.++...+..+.+.|.++|+++||+|+.|+++.++|.+..++..+...+..+..
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (529)
T TIGR02868 158 VLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARAT 237 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888877765544 333333344455566677788899999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 000830 924 GIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQV 1003 (1265)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 1003 (1265)
+....+..++..+...+.+|+|.+++..|.++.+.+.+...+......++..+......+..+..+.+|+.++++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~ 317 (529)
T TIGR02868 238 GLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPR 317 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 88888888888888888899999999999999999888877777777788888888889999999999999999776543
Q ss_pred cCCCC---cccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEEC
Q 000830 1004 IGDIG---EELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVD 1080 (1265)
Q Consensus 1004 ~~~~~---~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~id 1080 (1265)
..... ...++..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++|
T Consensus 318 ~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~ 395 (529)
T TIGR02868 318 PEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLD 395 (529)
T ss_pred CCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 22111 1112235679999999999753 359999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChh
Q 000830 1081 GIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGG 1160 (1265)
Q Consensus 1081 G~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1160 (1265)
|+|++++ .+++|++|+||||||+||+|||||||++|.++++|+++++|++.+++++++.+||+||||.|||+|.+||||
T Consensus 396 g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGG 474 (529)
T TIGR02868 396 GVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGG 474 (529)
T ss_pred CEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCc
Q 000830 1161 QKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRL 1215 (1265)
Q Consensus 1161 QkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl 1215 (1265)
||||||||||++++|+|||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 475 QrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 475 ERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999998999999999996
No 53
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1e-76 Score=738.53 Aligned_cols=565 Identities=28% Similarity=0.389 Sum_probs=479.2
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 684 AIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFG 763 (1265)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 763 (1265)
.++++++.+++++.+..+++++++..++.+..++.++..++...... ....+.+.++++.++..+..++...+..
T Consensus 7 ~~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (585)
T TIGR01192 7 YVRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKS-----DVLPTLALWAGFGVFNTIAYVLVAREAD 81 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777888888777777777777766667777777666543211 1111112222223333344444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 764 IMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRIT 843 (1265)
Q Consensus 764 ~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 843 (1265)
....++..++|.++|++++++|++||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.++
T Consensus 82 ~~~~~~~~~lr~~~~~~l~~l~~~~~~~--~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 159 (585)
T TIGR01192 82 RLAHGRRATLLTEAFGRIISMPLSWHQQ--RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLS 159 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666677779999999999999996 78999999999999999999988888888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000830 844 LVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIA 923 (1265)
Q Consensus 844 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1265)
+++++.+|+.++......+..+....+..+...+..+.+.|.++|+++||+|+.++.+.+++.+..++..+...+..+..
T Consensus 160 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (585)
T TIGR01192 160 IVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWW 239 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888887777776666666666666777888899999999999999999999999999999888888777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 000830 924 GIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQV 1003 (1265)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 1003 (1265)
++...+..++..+...+.+++|.+++..+.++.+.+++...+......++..+......+..+..+.+|+.++.+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~ 319 (585)
T TIGR01192 240 ALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQR 319 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 77777777777777888899999999999999999988888887788888888888889999999999999998765432
Q ss_pred cCCCC-cccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCc
Q 000830 1004 IGDIG-EELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGI 1082 (1265)
Q Consensus 1004 ~~~~~-~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~ 1082 (1265)
..... ...++..+.|+|+||+|+|+++ .++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|++||+
T Consensus 320 ~~~~~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~ 397 (585)
T TIGR01192 320 EEPADAPELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGI 397 (585)
T ss_pred cCCccCCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCE
Confidence 21111 1112235679999999999743 35899999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1083 DIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1083 di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
|+++++.+++|++++||||||.+|++|++|||.++.++.++++++++++.+++++++.++|+|+||.+|++|.+||||||
T Consensus 398 ~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~ 477 (585)
T TIGR01192 398 DINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGER 477 (585)
T ss_pred EhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHH
Confidence 99999999999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
|||+|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+
T Consensus 478 qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 557 (585)
T TIGR01192 478 QRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELI 557 (585)
T ss_pred HHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hcCCcHHHHHHHHhhc
Q 000830 1243 ENEDGAYFKLINLQQR 1258 (1265)
Q Consensus 1243 ~~~~g~f~~l~~~~~~ 1258 (1265)
+ .+|.|+++++.+..
T Consensus 558 ~-~~~~y~~l~~~~~~ 572 (585)
T TIGR01192 558 Q-KDGRFYKLLRRSGL 572 (585)
T ss_pred H-CCChHHHHHHhCcc
Confidence 8 68999999988753
No 54
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=5e-77 Score=737.58 Aligned_cols=525 Identities=23% Similarity=0.303 Sum_probs=456.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 58 MSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMR 137 (1265)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR 137 (1265)
+.++++++++.+++.+..|+++++++|.+.... .. ...+..+...+++++++..++.++..++..+.+.++..++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAG---EP-LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---CC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777777888888889999999763111 01 12223334445555666778889999999999999999999
Q ss_pred HHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 138 MAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIAL 217 (1265)
Q Consensus 138 ~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~ 217 (1265)
.++|++++++|+.+|++ .++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.+++++++.+|++++
T Consensus 81 ~~l~~~l~~~~~~~~~~-~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQG-RPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHhCCchhhcc-CChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999999999999987 58999999999999999999999889999988888889999999999999999988898888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 218 AGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLF 297 (1265)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1265)
+..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.......+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888889999999999999999999999999999999999999999988888887777776666665555555
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCC
Q 000830 298 LSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDK 377 (1265)
Q Consensus 298 ~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~ 377 (1265)
+..+++++++++.+..|.++.|.+++++.+......|+..+...+..+.+++.+.+|+.++++.+++... .. .....
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~--~~-~~~~~ 316 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG--KA-PVTAA 316 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--Cc-CCCCC
Confidence 5555555566666678999999988877776677778888888999999999999999999975432111 11 11111
Q ss_pred CcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHh
Q 000830 378 LSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLR 457 (1265)
Q Consensus 378 ~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 457 (1265)
..+.|+++||+|+||++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|
T Consensus 317 ~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 23579999999999853 34699999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 458 QQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
++|+||+|+|++|++||+|||.++.++.+++++.++++.+++++++.++|+|+||.+||+|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEE
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVV 591 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l 591 (1265)
+|+|+|||||||+||+++++.+.+.+.++.+++|+|+||||+++++.||+|++|
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999988899999999999999999999985
No 55
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.8e-76 Score=741.42 Aligned_cols=566 Identities=34% Similarity=0.533 Sum_probs=484.2
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 686 KLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIM 765 (1265)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 765 (1265)
.++++.+++++.+...+++.++.+......++.+..+++..+.... ......+..+++++.++..+..+.+.++....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS--SGLLNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666666666666666555555555555555554332111 11122233334444455566677788888889
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 766 GERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLV 845 (1265)
Q Consensus 766 ~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv 845 (1265)
+.++..++|..+++++++.|..+|+. ..+|++++|+++|++.+++.+...+..++..++.+++++++++.++|.++++
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDK--NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSL 163 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999986 7799999999999999999999888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000830 846 VVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGI 925 (1265)
Q Consensus 846 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1265)
+++.+|+.++..++..+..+...++..+......+.+.|.++|+++||+++.++++.++|.+..++..+...+.......
T Consensus 164 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (576)
T TIGR02204 164 VLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRAL 243 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888888777777777777777777777888889999999999999999999999999999998888877777766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccC
Q 000830 926 FYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIG 1005 (1265)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~ 1005 (1265)
...+..++.+....+.+++|.+++..+.++.+.+++...+......++..+...+..+..+..+.+|+.++++.+++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 323 (576)
T TIGR02204 244 LTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKA 323 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 66666666666777788899999999999999998888888888889999999999999999999999999876554221
Q ss_pred CC-C-cccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcc
Q 000830 1006 DI-G-EELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGID 1083 (1265)
Q Consensus 1006 ~~-~-~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~d 1083 (1265)
.. . ....+..+.|+|+||+|+|++++++++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++||+|
T Consensus 324 ~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~ 403 (576)
T TIGR02204 324 PAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVD 403 (576)
T ss_pred CCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEE
Confidence 11 1 111123467999999999986433579999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1084 IKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1084 i~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
+++++.+++|++++||||||++|+|||||||.++.++.++++++++++.+++.++++++|+|+||++||+|.+|||||||
T Consensus 404 i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Q 483 (576)
T TIGR02204 404 LRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQ 483 (576)
T ss_pred HHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHH
Confidence 99999999999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
||+||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|++
T Consensus 484 rl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 484 RIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred HHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999998
Q ss_pred cCCcHHHHHHHHh
Q 000830 1244 NEDGAYFKLINLQ 1256 (1265)
Q Consensus 1244 ~~~g~f~~l~~~~ 1256 (1265)
.++.|++|++.|
T Consensus 564 -~~~~~~~l~~~~ 575 (576)
T TIGR02204 564 -KGGLYARLARLQ 575 (576)
T ss_pred -cCChHHHHHhhc
Confidence 789999999765
No 56
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-76 Score=737.60 Aligned_cols=514 Identities=27% Similarity=0.389 Sum_probs=456.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHH
Q 000830 740 ITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRST 819 (1265)
Q Consensus 740 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~ 819 (1265)
+.++++++.++..++.++..++....+.+...++|.++|+++++.|++||++ +++|++++|+++|++.++..+...+.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~g~i~srl~~Dv~~i~~~~~~~~~ 115 (569)
T PRK10789 38 WIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLR--HRTGDLMARATNDVDRVVFAAGEGVL 115 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3444444555566777777788888999999999999999999999999986 78999999999999999988777777
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccH
Q 000830 820 ILIQNFGLVTASFVIA-FILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSE 898 (1265)
Q Consensus 820 ~~i~~~~~~~~~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e 898 (1265)
.++..++..+++++++ ++++|.+++++++.+|+.++......+..++..++.++...+..+.+.|.++|+++||+|+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e 195 (569)
T PRK10789 116 TLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLE 195 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhccc
Confidence 7777766655555555 589999999999888888877777777766666677777788889999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 899 DKVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLA 978 (1265)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1265)
+.+.++|.+..++..+...+..+..+....+......+...+.+++|.+++..+.++.+.+++...+......++..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~ 275 (569)
T PRK10789 196 DRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAW 275 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888777777777777777777777888999999999999999998888888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCC
Q 000830 979 LVPDLLKGNQMAASVFEVLDRKTQVIGDIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSG 1058 (1265)
Q Consensus 979 ~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSG 1058 (1265)
....+..+..+.+|+.++++.+++.... ....++.++.|+|+||+|+|+.. +.++|+|+||+|+|||++|||||||||
T Consensus 276 ~~~~~~~~~~a~~ri~~ll~~~~~~~~~-~~~~~~~~~~I~~~~v~~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsG 353 (569)
T PRK10789 276 MFNIVERGSAAYSRIRAMLAEAPVVKDG-SEPVPEGRGELDVNIRQFTYPQT-DHPALENVNFTLKPGQMLGICGPTGSG 353 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccCC-CCCCCCCCCcEEEEEEEEECCCC-CCccccCeeEEECCCCEEEEECCCCCC
Confidence 8999999999999999999866543211 11122335689999999999753 346899999999999999999999999
Q ss_pred hHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHH
Q 000830 1059 KSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSF 1138 (1265)
Q Consensus 1059 KSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~ 1138 (1265)
||||+++|+|+|+|++|+|++||+|+++++.+++|++++||||+|++|++|+||||.++.++.++++++++++.++++++
T Consensus 354 KSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~ 433 (569)
T PRK10789 354 KSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDD 433 (569)
T ss_pred HHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred HHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhh
Q 000830 1139 ISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTI 1218 (1265)
Q Consensus 1139 i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti 1218 (1265)
+.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++
T Consensus 434 i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~ 513 (569)
T PRK10789 434 ILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSAL 513 (569)
T ss_pred HHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred hccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHHHhhc
Q 000830 1219 KNADQISVIESGKIIEQGTHSSLVENEDGAYFKLINLQQR 1258 (1265)
Q Consensus 1219 ~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~~~~~ 1258 (1265)
..||+|++|++|+++|.|+|++|++ .+|.|+++++.|..
T Consensus 514 ~~~d~i~~l~~G~i~~~g~~~~l~~-~~~~y~~l~~~~~~ 552 (569)
T PRK10789 514 TEASEILVMQHGHIAQRGNHDQLAQ-QSGWYRDMYRYQQL 552 (569)
T ss_pred HcCCEEEEEeCCEEEEecCHHHHHH-cCChHHHHHHHhhh
Confidence 9999999999999999999999998 68999999987654
No 57
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.3e-77 Score=671.32 Aligned_cols=554 Identities=22% Similarity=0.287 Sum_probs=453.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 55 YILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAA 134 (1265)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (1265)
+..+.++++++++..+....+..+.|+++..-... +......+......+=++++...+..|...+..+....++..
T Consensus 15 ~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAia---g~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~AtfrvL~ 91 (573)
T COG4987 15 KFGLLLGIVLAILTLLASIGLLTLSGWFISASAIA---GLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHDATFRVLS 91 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 44556777777766665555555677777653221 110001111112222345666778889999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 000830 135 KMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISLVTLSIV-P 213 (1265)
Q Consensus 135 ~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~-p 213 (1265)
++|.++|+++...+..-..+ .++||+++|+..|++.+++.+-..+.+.+..+..+.+..+.+-+++|.+++.+...+ .
T Consensus 92 ~lRv~~f~kl~p~sp~~~~r-~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~~ll~ 170 (573)
T COG4987 92 ALRVRLFEKLEPLSPALLLR-YRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGLILLL 170 (573)
T ss_pred HHHHHHHHhhccCChHHHHh-cChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999988876 588999999999999999999999988888888777777777788998876554433 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 214 LIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMH 293 (1265)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (1265)
+++++..++.+..++..++..+..+...+.+.|.+.|....+.||.++.+.+.+++.-..+.+...|..++.++...+..
T Consensus 171 ~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~ 250 (573)
T COG4987 171 LLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSDAILL 250 (573)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566777778888888888899999999999999999999999999999999999999999999888888877777
Q ss_pred HHHHHHHH-HHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHhcccccccccccc
Q 000830 294 CVLFLSWS-LLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAA-PDITAFIRAKAAAYPIFEMIERDTMSKASSKT 371 (1265)
Q Consensus 294 ~~~~~~~~-~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~ 371 (1265)
++..+..+ .++|.++ .+..|..+.-.....++.++....++..+. ..+....+...|+.|+.++++.+++...+ +
T Consensus 251 l~~g~~v~~~l~w~a~-~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~--~ 327 (573)
T COG4987 251 LIAGLLVIGLLLWMAA-QVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTFP--D 327 (573)
T ss_pred HHHHHHHHHHHHHHHh-cCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCCC--c
Confidence 66655555 4445443 233344432222222222222222333333 45677888899999999999887765432 1
Q ss_pred CCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCC
Q 000830 372 GRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGL 451 (1265)
Q Consensus 372 ~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~ 451 (1265)
.........++++||+|+||++ +.++|+|+||++++||++||+|+|||||||++++|.|.|+|++|+|.++|.++..+
T Consensus 328 -~~~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l 405 (573)
T COG4987 328 -EQTATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASL 405 (573)
T ss_pred -cccCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhC
Confidence 1111222279999999999965 45799999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 452 DLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 452 ~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
+.+.+|+.|++++|.++||++|+|||+.+++|++++|+++++++.+++++++++.|+|++|.+||.|..||||||||+||
T Consensus 406 ~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAl 485 (573)
T COG4987 406 DEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLAL 485 (573)
T ss_pred ChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCch
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNS 611 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 611 (1265)
||+|++|+|++||||||.+||+.||+++++.|.+..+|||+|+||||+..++.||+|+||++|+|+|+|+|.+|+.+ ++
T Consensus 486 AR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll~~-~g 564 (573)
T COG4987 486 ARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELLAN-NG 564 (573)
T ss_pred HHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhhcc-cc
Confidence 99999999999999999999999999999999998899999999999999999999999999999999999999996 89
Q ss_pred HHHHHHH
Q 000830 612 AYAALVQ 618 (1265)
Q Consensus 612 ~~~~~~~ 618 (1265)
.|+++++
T Consensus 565 ~~~~l~q 571 (573)
T COG4987 565 RYKRLYQ 571 (573)
T ss_pred HHHHHhc
Confidence 9998864
No 58
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.5e-76 Score=799.12 Aligned_cols=508 Identities=20% Similarity=0.274 Sum_probs=434.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHH
Q 000830 105 LDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFM 184 (1265)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~ 184 (1265)
.++++++++..++.++..++..+.+.+...++|.++++++++.|++||++ .++|+++||+++|++.+++.+...+..++
T Consensus 1009 ~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~-~~~G~ilnR~s~Di~~id~~l~~~~~~~~ 1087 (1522)
T TIGR00957 1009 SVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER-TPSGNLVNRFSKELDTVDSMIPPVIKMFM 1087 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc-CChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666667777777888888899999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHH
Q 000830 185 HYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAV 264 (1265)
Q Consensus 185 ~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~ 264 (1265)
..++.+++.++++++.+|.++++++.++++.+++..++.+..+...+......+...+.+.|+++|+++||+|++|+.+.
T Consensus 1088 ~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~ 1167 (1522)
T TIGR00957 1088 GSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFI 1167 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHH
Confidence 99999999999988888877766665566666666666666666666677778889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHHHHhhHHHHH
Q 000830 265 KVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVH-KHISNGGESFTTMLNVVIAGLSLGQAAPDIT 343 (1265)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 343 (1265)
+++.+..+...+..........+......++.. .++++.+.+.+. .+.+++|.+..++.+......++..+...+.
T Consensus 1168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~ 1244 (1522)
T TIGR00957 1168 HQSDLKVDENQKAYYPSIVANRWLAVRLECVGN---CIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSS 1244 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888877766655544444333333333222 223334444443 5778999888877777777788888999999
Q ss_pred HHHHHHHHHHHHHHHhccccccccccccCCC--CCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCC
Q 000830 344 AFIRAKAAAYPIFEMIERDTMSKASSKTGRK--LDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGS 421 (1265)
Q Consensus 344 ~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~--~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGs 421 (1265)
.+..+.+|.+|+.++++.+++.+.......+ .++..|.|+|+||+|+|+++. .++|+|+||+|+|||++||||+|||
T Consensus 1245 ~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~-~~vL~~is~~I~~GekiaIVGrTGs 1323 (1522)
T TIGR00957 1245 EMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDL-DLVLRHINVTIHGGEKVGIVGRTGA 1323 (1522)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCC-cccccceeEEEcCCCEEEEECCCCC
Confidence 9999999999999999766543211111111 124568899999999997542 4699999999999999999999999
Q ss_pred cHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHH
Q 000830 422 GKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMS 501 (1265)
Q Consensus 422 GKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~ 501 (1265)
|||||+++|.|+|+|++|+|.+||+|+++++.+++|++|++|||||.||+|||||||.... +++++++++|++.+++++
T Consensus 1324 GKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~ 1402 (1522)
T TIGR00957 1324 GKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKT 1402 (1522)
T ss_pred CHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHH
Confidence 9999999999999999999999999999999999999999999999999999999998332 578999999999999999
Q ss_pred HHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchh
Q 000830 502 FISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLST 581 (1265)
Q Consensus 502 ~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~ 581 (1265)
+|.++|+|+||.+||+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||+++
T Consensus 1403 ~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~t 1482 (1522)
T TIGR00957 1403 FVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNT 1482 (1522)
T ss_pred HHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred hhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHH
Q 000830 582 IRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQL 619 (1265)
Q Consensus 582 ~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 619 (1265)
+.+||+|+||++|+|+|.|+|+||+++ ++.|+++++.
T Consensus 1483 i~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~ 1519 (1522)
T TIGR00957 1483 IMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKD 1519 (1522)
T ss_pred HHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHH
Confidence 999999999999999999999999987 7999998864
No 59
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-79 Score=667.54 Aligned_cols=491 Identities=30% Similarity=0.425 Sum_probs=429.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000830 759 HLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFV-IAFI 837 (1265)
Q Consensus 759 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~-~~~~ 837 (1265)
..++...++.+.+.+--+.|.|+.++++.|+-. ..+|.+...+......++..+...+...+..++-+....+ +...
T Consensus 3 ~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~--r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~ 80 (497)
T COG5265 3 DRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE--RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRV 80 (497)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh--cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 345677788888899999999999999999875 5667666666666666666666666666655554444444 4457
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHH
Q 000830 838 LNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSF 917 (1265)
Q Consensus 838 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~ 917 (1265)
++|+.+++.+.++.+.+++.....-......++..++.+.++....+++-+.+|+|.|+.|+.+..+|.+.++.+.+...
T Consensus 81 ~~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~ 160 (497)
T COG5265 81 YGWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAI 160 (497)
T ss_pred cccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHH
Confidence 89999999888888877776666666666667777788888899999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000830 918 IRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVL 997 (1265)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~ 997 (1265)
+.....++.......+...........+...+..+.+|.++++..-.++.....++........++.++..-.++.++++
T Consensus 161 k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl 240 (497)
T COG5265 161 KVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLL 240 (497)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhh
Confidence 77766666666666666666667777778888889999999888777777888888888888888999999999999998
Q ss_pred cccccccCC-CCcccC-CCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCc
Q 000830 998 DRKTQVIGD-IGEELT-NVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAG 1075 (1265)
Q Consensus 998 ~~~~~~~~~-~~~~~~-~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G 1075 (1265)
+.+.+.... ..++.+ -..|.|.|+||+|.|. |..|+|+|+||++++|+++||||+||+||||+.++|+|||++++|
T Consensus 241 ~~~~~v~d~pda~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 241 DVEAEVSDAPDAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred ccchhhccCCCCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 877665433 233334 3468899999999997 456899999999999999999999999999999999999999999
Q ss_pred EEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCC
Q 000830 1076 KVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGV 1155 (1265)
Q Consensus 1076 ~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~ 1155 (1265)
.|.|||+|++++..+++|+.||+||||.+||+.|+..|+.||+|+++++|+++|++.+++++||+++|+||||.|||+|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEe
Q 000830 1156 QLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQ 1235 (1265)
Q Consensus 1156 ~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~ 1235 (1265)
.||||||||+||||++|++|+||+|||||||||..||++||.+|++..+++|.++|||||+||.+||.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhhhhcCCcHHHHHHH
Q 000830 1236 GTHSSLVENEDGAYFKLIN 1254 (1265)
Q Consensus 1236 Gt~~eLl~~~~g~f~~l~~ 1254 (1265)
|+|+||++ .+|.|++||.
T Consensus 479 g~h~~ll~-~~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLA-AGGLYAEMWR 496 (497)
T ss_pred CcHHHHHH-cCChHHHHhc
Confidence 99999999 6999999995
No 60
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.8e-76 Score=791.82 Aligned_cols=508 Identities=22% Similarity=0.294 Sum_probs=403.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHH
Q 000830 103 YSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGN 182 (1265)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~ 182 (1265)
+.+++++++++..++.+++.++..+.+.+...++|.++++++++.|++||++ +++|+++||+++|++.+++.+...+..
T Consensus 955 ~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~-~~~G~IlnR~s~Di~~id~~l~~~~~~ 1033 (1622)
T PLN03130 955 YNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHT-NPLGRIINRFAKDLGDIDRNVAVFVNM 1033 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhcc-CCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556666777788888888889999999999999999999999999998 589999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 000830 183 FMHYISRFLGGFIIGFARVWQISLVTLSIVPLIAL-AGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGED 261 (1265)
Q Consensus 183 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~ 261 (1265)
++..++.+++.++++++++|. .++.+++++++++ +..++.+..++..+......+...+++.|+++|+++||+|++++
T Consensus 1034 ~~~~~~~~i~~~i~i~~~~~~-~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~ 1112 (1622)
T PLN03130 1034 FLGQIFQLLSTFVLIGIVSTI-SLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYD 1112 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHH
Confidence 999999888888888888873 3333333333222 22233344444444455566778899999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcc---------cchhHHHHHHHHHHHH
Q 000830 262 KAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVW-YVSVVVHKHI---------SNGGESFTTMLNVVIA 331 (1265)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~---------~~~g~~~~~~~~~~~~ 331 (1265)
++.+++.+..+...+.. ........+..+...+...++++ .+.+.+..+. .+.|.+++ +....
T Consensus 1113 ~f~~~~~~~~~~~~~~~----~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls---~~~~~ 1185 (1622)
T PLN03130 1113 RMAEINGRSMDNNIRFT----LVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLS---YALNI 1185 (1622)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHH---HHHHH
Confidence 77776666554443332 22221111111111111122222 2333333321 12233332 22223
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccC--CCCCCCcccEEEEeEEEECCCCCCCccccceeEEecC
Q 000830 332 GLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTG--RKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPA 409 (1265)
Q Consensus 332 ~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~ 409 (1265)
..++..+......+..+.+|.+|+.++++.+++.+...+.. .+.++..|.|+|+||+|+|+++ .+++|+|+||+|+|
T Consensus 1186 ~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~ 1264 (1622)
T PLN03130 1186 TSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISP 1264 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcC
Confidence 33455555666778899999999999998765532111111 1122456789999999999643 24699999999999
Q ss_pred CCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHH
Q 000830 410 GKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEE 489 (1265)
Q Consensus 410 g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~ 489 (1265)
||++||||+||||||||+++|+|+|+|++|+|.|||+|+++++++++|++|++|||||.||+|||||||.++. ..++++
T Consensus 1265 GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdee 1343 (1622)
T PLN03130 1265 SEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDAD 1343 (1622)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999886 578999
Q ss_pred HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCC
Q 000830 490 ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVG 569 (1265)
Q Consensus 490 ~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~ 569 (1265)
+++|++.++++++|.++|+|+||.+||+|.+|||||||||||||||+++|+|||||||||+||++||+.|++.|++..++
T Consensus 1344 i~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~ 1423 (1622)
T PLN03130 1344 LWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKS 1423 (1622)
T ss_pred HHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred CeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHHHH
Q 000830 570 RTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQLQE 621 (1265)
Q Consensus 570 ~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 621 (1265)
+|+|+||||++++.+||+|+||++|+|+|.|+|+||++++++.|++|++.+.
T Consensus 1424 ~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1424 CTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred CEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcC
Confidence 9999999999999999999999999999999999999876789999987654
No 61
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.7e-78 Score=699.12 Aligned_cols=486 Identities=29% Similarity=0.469 Sum_probs=377.7
Q ss_pred cEEEEeEEEECCCCCC-CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCC----cceEEECCeeCCCCChHH
Q 000830 381 HIEFKDVSFCYPSRPD-VAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPL----SGEILLDGNNIKGLDLKW 455 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~----~G~i~~~g~~~~~~~~~~ 455 (1265)
-++++|++..|..... ..+++||||++.+||++||||+|||||||+++.|+|+.++. +|+|.++|+|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999975432 25899999999999999999999999999999999999987 899999999998888765
Q ss_pred Hh----hheeEEccCCc-cccc--cHHHHhcc----CCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChH
Q 000830 456 LR----QQIGLVNQEPA-LFAT--TIRENILY----GKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGG 524 (1265)
Q Consensus 456 ~r----~~i~~v~Q~~~-lf~~--ti~~ni~~----~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 524 (1265)
+| +.|+||||+|+ .+|. ||.+-|.- ..+. +.++.. .+..++.+.+ .+|+.... ...+..||||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~-~~~ea~--~~a~elL~~V-gl~~~~~~--~~yPheLSGG 158 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKG-SRAEAR--KRAVELLEQV-GLPDPERR--DRYPHQLSGG 158 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccc-cHHHHH--HHHHHHHHHc-CCCChhhh--ccCCcccCch
Confidence 53 46999999985 4543 66665542 2111 111111 1111222222 45654332 5688999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeC
Q 000830 525 QKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 525 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 601 (1265)
||||+.||+||+.+|++||+||||++||+.++.+|.+.|+++. .|.++|+|||++..+.+ ||||+||++|+++|.|+
T Consensus 159 ~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~ 238 (539)
T COG1123 159 MRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGP 238 (539)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecC
Confidence 9999999999999999999999999999999999999999986 48999999999999977 99999999999999999
Q ss_pred cchhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhh
Q 000830 602 HEELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKH 681 (1265)
Q Consensus 602 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1265)
.+++++++...|.+..-.. .+.
T Consensus 239 ~~~i~~~p~hpYT~~Ll~a------------------------~p~---------------------------------- 260 (539)
T COG1123 239 TEEILSNPQHPYTRGLLAA------------------------VPR---------------------------------- 260 (539)
T ss_pred HHHHHhccCCcccHHHHhh------------------------CCC----------------------------------
Confidence 9999887544443211000 000
Q ss_pred hHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 682 VSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLS 761 (1265)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 761 (1265)
T Consensus 261 -------------------------------------------------------------------------------- 260 (539)
T COG1123 261 -------------------------------------------------------------------------------- 260 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 762 FGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWR 841 (1265)
Q Consensus 762 ~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 841 (1265)
.+......
T Consensus 261 ---------------------------~~~~~~~~--------------------------------------------- 268 (539)
T COG1123 261 ---------------------------LGDEKIIR--------------------------------------------- 268 (539)
T ss_pred ---------------------------cccccccc---------------------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHH
Q 000830 842 ITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQ 921 (1265)
Q Consensus 842 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 921 (1265)
T Consensus 269 -------------------------------------------------------------------------------- 268 (539)
T COG1123 269 -------------------------------------------------------------------------------- 268 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000830 922 IAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKT 1001 (1265)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~ 1001 (1265)
.+.
T Consensus 269 -----------------------------------------------------------------------------~~~ 271 (539)
T COG1123 269 -----------------------------------------------------------------------------LPR 271 (539)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred cccCCCCcccCCCcccEEEEeEEEECCCC--------CCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC
Q 000830 1002 QVIGDIGEELTNVEGTIELRGVHFSYPSR--------PEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPT 1073 (1265)
Q Consensus 1002 ~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~--------~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~ 1073 (1265)
....+....++++|++.+|..+ ....+++||||++++||++||||+||||||||.++|+|+.+|+
T Consensus 272 -------~~~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~ 344 (539)
T COG1123 272 -------RGPLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPS 344 (539)
T ss_pred -------ccccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCC
Confidence 0000012248899999999842 1246899999999999999999999999999999999999999
Q ss_pred CcEEEECCcc--cCCCCHHHHhcccEEEecCCCCC---cccHHHHhccCC---CCCC----HHHHHHHHHHhchHHHHHh
Q 000830 1074 AGKVMVDGID--IKRLNLKSLRKHIALVQQEPALF---ATSIYENILYGK---DGAS----EGEVIEAAKLANAHSFISA 1141 (1265)
Q Consensus 1074 ~G~I~idG~d--i~~~~l~~lR~~i~~VpQdp~LF---~gTIreNl~~g~---~~~s----d~ei~~al~~a~l~~~i~~ 1141 (1265)
+|+|.++|.| .+.-+...+|+++-+|+|||+-. ..||+++|.-.. .... .+.+.+.++.+++..-
T Consensus 345 ~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~--- 421 (539)
T COG1123 345 SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPE--- 421 (539)
T ss_pred CceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHH---
Confidence 9999999977 33334566889999999999733 459999986321 1111 1235555666665431
Q ss_pred CCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh
Q 000830 1142 LPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIK 1219 (1265)
Q Consensus 1142 lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~ 1219 (1265)
........||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|+++.+ |.|.|+|||+++.++
T Consensus 422 -------~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~ 494 (539)
T COG1123 422 -------FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVR 494 (539)
T ss_pred -------HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence 23344567999999999999999999999999999999999999999999999875 689999999999999
Q ss_pred c-cCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHHHh
Q 000830 1220 N-ADQISVIESGKIIEQGTHSSLVENEDGAYFKLINLQ 1256 (1265)
Q Consensus 1220 ~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~~~ 1256 (1265)
. ||||+||++|+|||.|+.+++.+++...|.+..-..
T Consensus 495 ~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~a 532 (539)
T COG1123 495 YIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLAA 532 (539)
T ss_pred hhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHHh
Confidence 8 999999999999999999999998888998876543
No 62
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.2e-75 Score=721.96 Aligned_cols=532 Identities=21% Similarity=0.259 Sum_probs=456.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 59 SLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRM 138 (1265)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 138 (1265)
++.++++++..++....|++++.++|.+.... . ...+..+...++++.++..++.++..++....+.++..++|.
T Consensus 9 ~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~----~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 83 (544)
T TIGR01842 9 IIVGLFSFVINILMLAPPLYMLQVYDRVLTSG----S-VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQ 83 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555566666666778999999754211 1 122223333444455566778888888899999999999999
Q ss_pred HHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 139 AYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSE-KVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIAL 217 (1265)
Q Consensus 139 ~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~ 217 (1265)
++|+|++++|+.. .++..+++++|++.+++.+.. .+..++..++.++ .++++++++|.+++++++.+|++++
T Consensus 84 ~~~~~ll~~~~~~------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~ 156 (544)
T TIGR01842 84 PIFAASFSATLRR------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVG 156 (544)
T ss_pred HHHHHHhcCcccC------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999999832 256788999999999998877 4555555555444 4567899999999998888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 218 AGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLF 297 (1265)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1265)
+..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+..+....+..++..
T Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (544)
T TIGR01842 157 LALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRI 236 (544)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888888888899999999999999999999999999999999999999999888888888877777776666666
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCC
Q 000830 298 LSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDK 377 (1265)
Q Consensus 298 ~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~ 377 (1265)
+..++++++|++++.+|.++.|.+++++.+......|+..+...+..+.+++.+.+|+.++++.+++.+. . ...+.
T Consensus 237 ~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~-~~~~~ 312 (544)
T TIGR01842 237 VLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP---A-MPLPE 312 (544)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC---C-CCCCC
Confidence 6777788899999999999999999888777777789999999999999999999999999976544221 1 11122
Q ss_pred CcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHh
Q 000830 378 LSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLR 457 (1265)
Q Consensus 378 ~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 457 (1265)
..+.|+++||+|+|++. ++++|+|+||+++|||+++||||||||||||+++|+|+|+|++|+|.+||+++.+++.+++|
T Consensus 313 ~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~ 391 (544)
T TIGR01842 313 PEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFG 391 (544)
T ss_pred CCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHh
Confidence 34579999999999743 34689999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 458 QQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
++++||||+|++|++|++|||.++.++.+++++.++++.++++++++.+|+|+||.+||+|.+||||||||++||||+++
T Consensus 392 ~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~ 471 (544)
T TIGR01842 392 KHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYG 471 (544)
T ss_pred hheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999998877788999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhcc
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
+|++||||||||+||+++++.+.+.|.++. +++|+|+||||++.++.||+|++|++|++++.|+|+|+++
T Consensus 472 ~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 472 DPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999999999999999999885 6899999999999999999999999999999999999865
No 63
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.4e-75 Score=720.25 Aligned_cols=528 Identities=26% Similarity=0.323 Sum_probs=449.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 695 WTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVR 774 (1265)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr 774 (1265)
|+.+..+++++++.+...+..++.+++.++....... .......+.+.+++++++..++.+++.++....+.+...++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGE-PLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455666666666666666666666664431111 112233445556666677788888999999999999999999
Q ss_pred HHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 775 EKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATYPLII 854 (1265)
Q Consensus 775 ~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~ 854 (1265)
.++|+++++.|..||++ .++|++++|+++|++.++..+...+..++..+..+++++++++.++|.+++++++.+|+.+
T Consensus 81 ~~l~~~l~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~ 158 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQG--RPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIP 158 (529)
T ss_pred HHHHHHHHhCCchhhcc--CChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999999999986 8999999999999999999999888888888888888889999999999999998888877
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 855 SGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFI 934 (1265)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1265)
+..+...+..+...++.++...+..+.+.|+++|+++||+|+.|+++.++|.+..++..+...+..+.......+..++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02857 159 IFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666666666677777788889999999999999999999999999999988888877777766666666666666
Q ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccCCC
Q 000830 935 FSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIGEELTNV 1014 (1265)
Q Consensus 935 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~ 1014 (1265)
.+...+...++++.+..+.++.+.++....+......++..+......+..+..+.+|+.++++.+++..... ...++.
T Consensus 239 ~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~-~~~~~~ 317 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA-PVTAAP 317 (529)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc-CCCCCC
Confidence 6555555555555666888999998877777777778888888899999999999999999997543321111 111122
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhc
Q 000830 1015 EGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRK 1094 (1265)
Q Consensus 1015 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~ 1094 (1265)
.+.|+|+||+|+|+++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.+++|+
T Consensus 318 ~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~ 396 (529)
T TIGR02857 318 APSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRD 396 (529)
T ss_pred CCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHh
Confidence 4689999999999854 346899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000830 1095 HIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKN 1174 (1265)
Q Consensus 1095 ~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~ 1174 (1265)
+++||||||++|++||||||.++.++.+|+++++|++.++++++++++|+||||.+||+|.+||||||||++||||++++
T Consensus 397 ~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 397 QIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred heEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEE
Q 000830 1175 PEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVI 1227 (1265)
Q Consensus 1175 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl 1227 (1265)
|+|||||||||+||++||+.+++.+++..+++|+|+||||+++++.||+|+||
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999999988899999999999999999999986
No 64
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=8e-75 Score=781.42 Aligned_cols=512 Identities=20% Similarity=0.258 Sum_probs=406.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHH
Q 000830 103 YSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGN 182 (1265)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~ 182 (1265)
+...+++++++..++.+++.++..+.+.+...++|.++++++++.|++||++ +++|+++||+++|++.+++.+...+..
T Consensus 952 ~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~-~~~G~ilnr~s~Di~~id~~l~~~~~~ 1030 (1495)
T PLN03232 952 YIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHT-NPTGRVINRFSKDIGDIDRNVANLMNM 1030 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCc-CCchHHHHHhHhhHHHHHHHHHHHHHH
Confidence 4455666667777888888888889999999999999999999999999997 589999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 000830 183 FMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAG-GMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGED 261 (1265)
Q Consensus 183 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~ 261 (1265)
++..++.+++.+++++++++.. +++++++++++.+. .++.+..++..+......+...+.+.|+++|+++||+|++++
T Consensus 1031 ~~~~~~~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~ 1109 (1495)
T PLN03232 1031 FMNQLWQLLSTFALIGTVSTIS-LWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYD 1109 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHH
Confidence 8888888888888887777533 22222222222222 222333344555556677788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccc----hhHHHH-HHHHHHHHHHHH
Q 000830 262 KAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHK-HISN----GGESFT-TMLNVVIAGLSL 335 (1265)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~----~g~~~~-~~~~~~~~~~~l 335 (1265)
++.+++.+..+...+..........+.... +..+..+++++.+.+.+.. +... .+..+. ++.+......++
T Consensus 1110 ~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l 1186 (1495)
T PLN03232 1110 RMAKINGKSMDNNIRFTLANTSSNRWLTIR---LETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLL 1186 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHH
Confidence 887777766555444333221111111111 1111122222233333332 2211 111121 222333344566
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHhccccccccccccC--CCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEE
Q 000830 336 GQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTG--RKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIV 413 (1265)
Q Consensus 336 ~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~ 413 (1265)
..+...+..+..+.+|.+|+.++++.+++.+...... .+.++..|.|+|+||+|+|+++ .+++|+|+||+|+|||++
T Consensus 1187 ~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~Gekv 1265 (1495)
T PLN03232 1187 SGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKV 1265 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEE
Confidence 7777888899999999999999998765532211111 1112446789999999999643 246999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHH
Q 000830 414 ALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRA 493 (1265)
Q Consensus 414 ~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~ 493 (1265)
||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||||.||+|||||||.++. +++++++++|
T Consensus 1266 aIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~a 1344 (1495)
T PLN03232 1266 GVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEA 1344 (1495)
T ss_pred EEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999875 5789999999
Q ss_pred HHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEE
Q 000830 494 AKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTV 573 (1265)
Q Consensus 494 ~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i 573 (1265)
++.+++++++.++|+|+||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+|
T Consensus 1345 l~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI 1424 (1495)
T PLN03232 1345 LERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTML 1424 (1495)
T ss_pred HHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred EEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHHHH
Q 000830 574 VVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQLQE 621 (1265)
Q Consensus 574 ~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 621 (1265)
+||||++++.+||+|+||++|+|+|.|+|+||++++++.|+++++.+.
T Consensus 1425 ~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~ 1472 (1495)
T PLN03232 1425 VIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTG 1472 (1495)
T ss_pred EEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 999999999999999999999999999999999885579999987653
No 65
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.3e-74 Score=777.24 Aligned_cols=512 Identities=19% Similarity=0.234 Sum_probs=417.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000830 107 FVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHY 186 (1265)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~ 186 (1265)
++++.++..++.++..++....+.+...++|.++|+++++.|+.||++ +++|+++||+++|++.+++.+...+..++..
T Consensus 1004 y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~-~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~ 1082 (1560)
T PTZ00243 1004 YLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT-TPLGRILNRFSRDIDILDNTLPMSYLYLLQC 1082 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC-CCccHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 333334444444555555555667778899999999999999999998 5999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHH
Q 000830 187 ISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKV 266 (1265)
Q Consensus 187 ~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~ 266 (1265)
++.+++.++++++.+|.+.++++.++.+...+..++.+..+...+......+...+.++|+++|+++||+|++|+.+.++
T Consensus 1083 ~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~ 1162 (1560)
T PTZ00243 1083 LFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQE 1162 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHH
Confidence 99999999999988885443322222223333444555556666666677788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHH
Q 000830 267 YKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVV--VHKHISNGGESFTTMLNVVIAGLSLGQAAPDITA 344 (1265)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 344 (1265)
|.+..+...+...+......+......++..+...++.+++... ...+.++.|.+..++.+......++..+...+..
T Consensus 1163 ~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~ 1242 (1560)
T PTZ00243 1163 ALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVAT 1242 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988887776665544444444434444333333333333332 2234466776655555556666788888888999
Q ss_pred HHHHHHHHHHHHHHhcccccccccc-------------------------cc-CC---CCCCCcccEEEEeEEEECCCCC
Q 000830 345 FIRAKAAAYPIFEMIERDTMSKASS-------------------------KT-GR---KLDKLSGHIEFKDVSFCYPSRP 395 (1265)
Q Consensus 345 ~~~~~~a~~ri~~~l~~~~~~~~~~-------------------------~~-~~---~~~~~~~~i~~~~v~f~y~~~~ 395 (1265)
+..++.+.+|+.++++..++.+... +. .. +.++..|.|+|+||+|+|++.
T Consensus 1243 le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~- 1321 (1560)
T PTZ00243 1243 VEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG- 1321 (1560)
T ss_pred HHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-
Confidence 9999999999999996433211000 00 00 011234789999999999753
Q ss_pred CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHH
Q 000830 396 DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIR 475 (1265)
Q Consensus 396 ~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~ 475 (1265)
..++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|+||||||.||+||||
T Consensus 1322 ~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIr 1401 (1560)
T PTZ00243 1322 LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVR 1401 (1560)
T ss_pred CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHH
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC-CCEEEEeCcCCCCCHH
Q 000830 476 ENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN-PSILLLDEATSALDAE 554 (1265)
Q Consensus 476 ~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~-~~illlDE~ts~lD~~ 554 (1265)
|||..+. +++++++++|++.++++++|.++|+|+||.+||+|.+|||||||||||||||+++ |+|||||||||+||++
T Consensus 1402 eNIdp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~ 1480 (1560)
T PTZ00243 1402 QNVDPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPA 1480 (1560)
T ss_pred HHhCccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHH
Confidence 9998753 6789999999999999999999999999999999999999999999999999996 8999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHHHH
Q 000830 555 SENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQLQE 621 (1265)
Q Consensus 555 ~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 621 (1265)
|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||++++++.|+++++.+.
T Consensus 1481 te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1481 LDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 9999999999988899999999999999999999999999999999999999866889999987653
No 66
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-76 Score=647.44 Aligned_cols=490 Identities=31% Similarity=0.418 Sum_probs=423.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000830 124 CWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLG-GFIIGFARVW 202 (1265)
Q Consensus 124 ~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~ 202 (1265)
++...++.....+--..|.|+.++++.|+-+ +.+|.+...+......|+..+...+...+-.++-+.. +.++...++|
T Consensus 5 ~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~-r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~ 83 (497)
T COG5265 5 LFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE-RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGW 83 (497)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcchhhhhh-cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 3455666666777788899999999999977 5889998888777777777666665555555544433 3344556899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 000830 203 QISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAG 282 (1265)
Q Consensus 203 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 282 (1265)
+.++++++.+.++.++.....-......++..++-++++....+++-+..+||.|+.|+.+..+|++.++.+.+...|..
T Consensus 84 ~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~ 163 (497)
T COG5265 84 WFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVH 163 (497)
T ss_pred HHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHH
Confidence 99999888887777766666655566667777888889999999999999999999999999999999999999888876
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccc
Q 000830 283 LAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERD 362 (1265)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 362 (1265)
.-.++....-..+......+....+...+..|.+|.|+++..-..+.....|+..+...+..+.+++.-+++.+++++.+
T Consensus 164 ~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~ 243 (497)
T COG5265 164 VSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVE 243 (497)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccc
Confidence 55554444344444445555666777788899999999877666666777888888889999999999999999999876
Q ss_pred cccccccccCCCCC-CCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceE
Q 000830 363 TMSKASSKTGRKLD-KLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEI 441 (1265)
Q Consensus 363 ~~~~~~~~~~~~~~-~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 441 (1265)
.+....+ ..++.+ ...+.+.|+||+|.|.. ..++|+++||++++|+++|+|||||+||||++++|.|||++++|.|
T Consensus 244 ~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I 320 (497)
T COG5265 244 AEVSDAP-DAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSI 320 (497)
T ss_pred hhhccCC-CCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceE
Confidence 6554322 222333 34578999999999974 5679999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCC
Q 000830 442 LLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQL 521 (1265)
Q Consensus 442 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~L 521 (1265)
.+||+|+++...+++|+.||+||||..||++|+..||.||+|.++++|+..|++.++.++||..+|+||+|.|||+|-.|
T Consensus 321 ~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglkl 400 (497)
T COG5265 321 TIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKL 400 (497)
T ss_pred EEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeC
Q 000830 522 SGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 522 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 601 (1265)
|||||||+||||+++++|+||+|||+|||||.+||+.|+.+|++..+|+|.++|+|||+++-+||.|+||++|+|+|.|+
T Consensus 401 Sggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~ 480 (497)
T COG5265 401 SGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGT 480 (497)
T ss_pred cCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhccCCchHHHHHHH
Q 000830 602 HEELISNPNSAYAALVQ 618 (1265)
Q Consensus 602 ~~~l~~~~~~~~~~~~~ 618 (1265)
|+||++. +|.|++||.
T Consensus 481 h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 481 HEELLAA-GGLYAEMWR 496 (497)
T ss_pred HHHHHHc-CChHHHHhc
Confidence 9999998 999999984
No 67
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.3e-73 Score=704.01 Aligned_cols=538 Identities=23% Similarity=0.321 Sum_probs=450.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 693 PDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLTLR 772 (1265)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 772 (1265)
++++.+...++++++........++.+...++...... .......+.++++++.++..++.+++.++....+.++..+
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSG--SVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGA 80 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444455555544444444555555555432111 1112233444555556667788888899999999999999
Q ss_pred HHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 773 VREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVD-RSTILIQNFGLVTASFVIAFILNWRITLVVVATYP 851 (1265)
Q Consensus 773 lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~p 851 (1265)
+|.++|+++++.|+.. .+...+++++|++.+++.+.. .+..++..+..+ +.+++++.++|++++++++..|
T Consensus 81 lr~~~~~~ll~~~~~~-------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~l~li~l~~~~ 152 (544)
T TIGR01842 81 LNQPIFAASFSATLRR-------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMP-IYLLVCFLLHPWIGILALGGAV 152 (544)
T ss_pred HHHHHHHHHhcCcccC-------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHH
Confidence 9999999999999842 245678899999999998877 344444444443 4456788999999998888777
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000830 852 LIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQ 931 (1265)
Q Consensus 852 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1265)
++++..++..+..++..++.++...+..+.+.|.++|+++||+|+.++.+.++|.+..++..+...+.....+....+..
T Consensus 153 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (544)
T TIGR01842 153 VLVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSK 232 (544)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666566666666667777788889999999999999999999999999999999888887777777777777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccc
Q 000830 932 FFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIGEEL 1011 (1265)
Q Consensus 932 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~ 1011 (1265)
++......+.+++|.+++..|.++.+.+++...+......++..+......+..+..+.+|+.++++.+++.... ...
T Consensus 233 ~~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~--~~~ 310 (544)
T TIGR01842 233 YFRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA--MPL 310 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC--CCC
Confidence 777777788889999999999999999998888888888899999999999999999999999999765543211 112
Q ss_pred CCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH
Q 000830 1012 TNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS 1091 (1265)
Q Consensus 1012 ~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~ 1091 (1265)
++.++.|+++||+|+|++. +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+.+++.+.
T Consensus 311 ~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~ 389 (544)
T TIGR01842 311 PEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRET 389 (544)
T ss_pred CCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHH
Confidence 2335679999999999753 346899999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000830 1092 LRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAV 1171 (1265)
Q Consensus 1092 lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARAL 1171 (1265)
+|++++||||||++|++|+||||.++.++.++++++++++.++++++++++|+|+||.+||+|.+||||||||++||||+
T Consensus 390 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARal 469 (544)
T TIGR01842 390 FGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARAL 469 (544)
T ss_pred HhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999987777899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhh
Q 000830 1172 LKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1172 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
+++|+|||||||||+||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||++
T Consensus 470 l~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 470 YGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred hcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999999999999885 6899999999999999999999999999999999999986
No 68
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-74 Score=718.85 Aligned_cols=504 Identities=25% Similarity=0.402 Sum_probs=367.9
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCC----------
Q 000830 381 HIEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIK---------- 449 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~---------- 449 (1265)
.|+++|++++|+... +.++|+||||++++||++|||||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 599999999996322 346999999999999999999999999999999999999999999999997552
Q ss_pred CCChH---HHh-hheeEEccCC--ccccc-cHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCC
Q 000830 450 GLDLK---WLR-QQIGLVNQEP--ALFAT-TIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFETQVGERGI 519 (1265)
Q Consensus 450 ~~~~~---~~r-~~i~~v~Q~~--~lf~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 519 (1265)
+.+.. .+| ++||||+|+| .+++. ||.||+.++.. .....+..+ +..++.+.+ .+++ .+........
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~~~l~~~-gL~~-~~~~~~~~~~ 167 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMV--EAKRMLDQV-RIPE-AQTILSRYPH 167 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHC-CCCC-hhhHHhCCCc
Confidence 12222 233 4799999998 57764 99999987531 112222111 111111211 2321 1234566778
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEccCchhhhc-cCEEEEEeCCEE
Q 000830 520 QLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-V-GRTTVVVAHRLSTIRN-ADVIAVVQGRKI 596 (1265)
Q Consensus 520 ~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i 596 (1265)
+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|+++. + |+|+|+|||+++.+.. ||+|++|++|++
T Consensus 168 ~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i 247 (623)
T PRK10261 168 QLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEA 247 (623)
T ss_pred cCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCee
Confidence 899999999999999999999999999999999999999999999885 3 8999999999999866 999999999999
Q ss_pred EEeeCcchhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCc
Q 000830 597 VKTGSHEELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEP 676 (1265)
Q Consensus 597 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (1265)
++.|+++++...+...|..-.. ... + ... . . ...
T Consensus 248 ~~~g~~~~~~~~~~~~~~~~l~-----~~~----~--~~~---------~---------------------~----~~~- 281 (623)
T PRK10261 248 VETGSVEQIFHAPQHPYTRALL-----AAV----P--QLG---------A---------------------M----KGL- 281 (623)
T ss_pred cccCCHHHhhcCCCChhhhhhh-----hcc----C--ccc---------c---------------------c----ccc-
Confidence 9999988875432111110000 000 0 000 0 0 000
Q ss_pred cchhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 000830 677 ATAKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHA 756 (1265)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 756 (1265)
T Consensus 282 -------------------------------------------------------------------------------- 281 (623)
T PRK10261 282 -------------------------------------------------------------------------------- 281 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 757 IEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAF 836 (1265)
Q Consensus 757 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~ 836 (1265)
..+ .-++. ..
T Consensus 282 --------------------------~~~-~~~~~--~~----------------------------------------- 291 (623)
T PRK10261 282 --------------------------DYP-RRFPL--IS----------------------------------------- 291 (623)
T ss_pred --------------------------cCC-ccccc--cc-----------------------------------------
Confidence 000 00000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHH
Q 000830 837 ILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRS 916 (1265)
Q Consensus 837 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~ 916 (1265)
. ..
T Consensus 292 --------------------------------------------------------------------------~-~~-- 294 (623)
T PRK10261 292 --------------------------------------------------------------------------L-EH-- 294 (623)
T ss_pred --------------------------------------------------------------------------c-cc--
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 917 FIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEV 996 (1265)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~ 996 (1265)
.+
T Consensus 295 --------------------------------------------------------------------------~~---- 296 (623)
T PRK10261 295 --------------------------------------------------------------------------PA---- 296 (623)
T ss_pred --------------------------------------------------------------------------cc----
Confidence 00
Q ss_pred hcccccccCCCCcccCCCcccEEEEeEEEECCCCC--------CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhc
Q 000830 997 LDRKTQVIGDIGEELTNVEGTIELRGVHFSYPSRP--------EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILR 1068 (1265)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~--------~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~r 1068 (1265)
...+.... ...+.....++++||+++|+.+. ...+|+|+||+|++||++||+|+||||||||+++|.|
T Consensus 297 ~~~~~~~~----~~~~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~G 372 (623)
T PRK10261 297 KQEPPIEQ----DTVVDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLR 372 (623)
T ss_pred ccCccccc----ccccCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHc
Confidence 00000000 00000112599999999996321 2358999999999999999999999999999999999
Q ss_pred cCCCCCcEEEECCcccCCCCHH---HHhcccEEEecCCC--CCc-ccHHHHhccCC--CCC-CH----HHHHHHHHHhch
Q 000830 1069 FYDPTAGKVMVDGIDIKRLNLK---SLRKHIALVQQEPA--LFA-TSIYENILYGK--DGA-SE----GEVIEAAKLANA 1135 (1265)
Q Consensus 1069 l~~p~~G~I~idG~di~~~~l~---~lR~~i~~VpQdp~--LF~-gTIreNl~~g~--~~~-sd----~ei~~al~~a~l 1135 (1265)
+.+|++|+|.++|.++...+.. .+|++|+||||+|. ++. -|+.+|+.++. ... .. +++.+.++.+++
T Consensus 373 l~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL 452 (623)
T PRK10261 373 LVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGL 452 (623)
T ss_pred CCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCC
Confidence 9999999999999999877543 46789999999983 665 59999987531 111 11 234455555554
Q ss_pred H-HHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEe
Q 000830 1136 H-SFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVA 1212 (1265)
Q Consensus 1136 ~-~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~Ia 1212 (1265)
. +.. .....+||||||||++|||||+.+|++||||||||+||+.+.+.+.+.|++..+ +.|+|+||
T Consensus 453 ~~~~~-----------~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~is 521 (623)
T PRK10261 453 LPEHA-----------WRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFIS 521 (623)
T ss_pred CHHHh-----------hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 2 222 233457999999999999999999999999999999999999999999998753 68999999
Q ss_pred cCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCCcHHHH-HHH
Q 000830 1213 HRLSTIKN-ADQISVIESGKIIEQGTHSSLVENEDGAYFK-LIN 1254 (1265)
Q Consensus 1213 HRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~-l~~ 1254 (1265)
|+++.+.. ||||++|++|+|++.|+++++..++...|.+ ++.
T Consensus 522 Hdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 522 HDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred CCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 99999976 9999999999999999999998766666655 443
No 69
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=5.5e-72 Score=692.59 Aligned_cols=534 Identities=19% Similarity=0.161 Sum_probs=437.4
Q ss_pred hHHHHHHhhc-hhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000830 42 SLFKLFAFAD-FYDYILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWI 120 (1265)
Q Consensus 42 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (1265)
.+++++++++ +++ ..++++++++++.++.....+.+++.+++.... ... .. ...++++.++.+++.++
T Consensus 4 ~~~~l~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~----~~~--~~----~~~~~~~~~~~~~~~~~ 72 (555)
T TIGR01194 4 AIGEILALLRSPFP-AITAFSIALGLAGGLAIIALLASINNAIHEENF----LGQ--GS----LFSFGGLCLLALLFRIG 72 (555)
T ss_pred hHHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc----ccc--hH----HHHHHHHHHHHHHHHHH
Confidence 4667777777 554 445666677777777767766677777653110 000 01 11233344556677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 121 EVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFAR 200 (1265)
Q Consensus 121 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 200 (1265)
..++....+.++..++|.++|+|++++|+.+|++ .++|++++|+++|++.+++++.. ++.++..++.+++.+++++++
T Consensus 73 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~-~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 150 (555)
T TIGR01194 73 ADIFPAYAGMHIIANLRIALCEKILGAPIEEIDR-RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYL 150 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHh-cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999997 58999999999999999999864 777888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH--HHHHHHHHHHHHHHHHH
Q 000830 201 VWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGED--KAVKVYKEALSNTYKYG 278 (1265)
Q Consensus 201 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~--~~~~~~~~~~~~~~~~~ 278 (1265)
+|.+++++++++|+.+++..++.++.++...+.++..++.++.+.|.+.|+++||+|+.++ .+.+++++..++..+..
T Consensus 151 ~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (555)
T TIGR01194 151 SVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLH 230 (555)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999988889888877778788888888899999999999999999999999999954 56788888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000830 279 RKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEM 358 (1265)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~ 358 (1265)
.+.....+...++..++..+...+.++++++. +.++.|.+++++.+......|+..+...+..+++++++.+|+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~l 307 (555)
T TIGR01194 231 IIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADF 307 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665555444444444444444444555432 678999988888877777889999999999999999999999999
Q ss_pred hcccccc--cc-ccccCC----CCCCCcccEEEEeEEEECCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHH
Q 000830 359 IERDTMS--KA-SSKTGR----KLDKLSGHIEFKDVSFCYPSRP--DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISL 429 (1265)
Q Consensus 359 l~~~~~~--~~-~~~~~~----~~~~~~~~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~l 429 (1265)
++.+.+. .. .+.... ......+.|+++||+|+|++.+ +.++|+|+||++++||++|||||||||||||+++
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~l 387 (555)
T TIGR01194 308 GERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKL 387 (555)
T ss_pred HhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHH
Confidence 8532111 10 000000 1112245799999999997532 2369999999999999999999999999999999
Q ss_pred HHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCccc
Q 000830 430 IERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPER 509 (1265)
Q Consensus 430 l~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g 509 (1265)
|+|+|+|++|+|.+||+++++++.+++|++++||+|||++|++|+++|+ .++.+++++.++++.+++++++..+|+|
T Consensus 388 l~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g 464 (555)
T TIGR01194 388 FCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGG 464 (555)
T ss_pred HhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccc
Confidence 9999999999999999999999999999999999999999999999995 4567889999999999999999999999
Q ss_pred ccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHH-HH-cCCCeEEEEccCchhhhccCE
Q 000830 510 FETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALD-RV-MVGRTTVVVAHRLSTIRNADV 587 (1265)
Q Consensus 510 ~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~-~~-~~~~t~i~itH~l~~~~~~d~ 587 (1265)
|||. .+|||||||||+||||++++|+|||||||||+||+++++.+.+.+. .+ .+++|+|+||||+++++.||+
T Consensus 465 ~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~ 539 (555)
T TIGR01194 465 FSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQ 539 (555)
T ss_pred cCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCE
Confidence 9994 7899999999999999999999999999999999999999988764 34 368999999999999999999
Q ss_pred EEEEeCCEEEEe
Q 000830 588 IAVVQGRKIVKT 599 (1265)
Q Consensus 588 i~~l~~G~i~~~ 599 (1265)
|++|++|+++|.
T Consensus 540 i~~l~~G~i~~~ 551 (555)
T TIGR01194 540 IIKLAAGCIVKD 551 (555)
T ss_pred EEEEECCEEEEe
Confidence 999999999864
No 70
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-74 Score=706.11 Aligned_cols=462 Identities=23% Similarity=0.417 Sum_probs=357.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC--CcceEEECCeeCCCCChHH-Hh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP--LSGEILLDGNNIKGLDLKW-LR 457 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~~~~~~~~~-~r 457 (1265)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+... .|
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 4899999999963 3599999999999999999999999999999999999996 8999999999998766553 46
Q ss_pred hheeEEccCCccccc-cHHHHhccCCCC-----CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 458 QQIGLVNQEPALFAT-TIRENILYGKDD-----ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~~-ti~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
++++||+|++.+|.. |++||+.++... ...++..+. +.+.+..+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLR-----AQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHH-----HHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 789999999988875 999999987431 122222111 12223333 23333455667899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCC
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNP 609 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 609 (1265)
||||+.+|+|||||||||+||+.+...+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 233 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED- 233 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-
Confidence 999999999999999999999999999999998874 48999999999999876 999999999999988765443110
Q ss_pred chHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHHHH
Q 000830 610 NSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKLYS 689 (1265)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1265)
.....
T Consensus 234 -----~~~~~---------------------------------------------------------------------- 238 (506)
T PRK13549 234 -----DIITM---------------------------------------------------------------------- 238 (506)
T ss_pred -----HHHHH----------------------------------------------------------------------
Confidence 00000
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 690 MVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERL 769 (1265)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 769 (1265)
T Consensus 239 -------------------------------------------------------------------------------- 238 (506)
T PRK13549 239 -------------------------------------------------------------------------------- 238 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 770 TLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVAT 849 (1265)
Q Consensus 770 ~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~ 849 (1265)
++.. +.
T Consensus 239 ------------------~~~~---~~----------------------------------------------------- 244 (506)
T PRK13549 239 ------------------MVGR---EL----------------------------------------------------- 244 (506)
T ss_pred ------------------hhCc---Cc-----------------------------------------------------
Confidence 0000 00
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000830 850 YPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGI 929 (1265)
Q Consensus 850 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1265)
.
T Consensus 245 ----------------------------------------------------------------~--------------- 245 (506)
T PRK13549 245 ----------------------------------------------------------------T--------------- 245 (506)
T ss_pred ----------------------------------------------------------------c---------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCc
Q 000830 930 SQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIGE 1009 (1265)
Q Consensus 930 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~ 1009 (1265)
+ . .+.. . .
T Consensus 246 --------------------------------------------------------------~---~--~~~~-~----~ 253 (506)
T PRK13549 246 --------------------------------------------------------------A---L--YPRE-P----H 253 (506)
T ss_pred --------------------------------------------------------------c---c--cccc-c----c
Confidence 0 0 0000 0 0
Q ss_pred ccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-CCCcEEEECCcccCCCC
Q 000830 1010 ELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-PTAGKVMVDGIDIKRLN 1088 (1265)
Q Consensus 1010 ~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-p~~G~I~idG~di~~~~ 1088 (1265)
++....|+++||+++|+.+.+.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++...+
T Consensus 254 --~~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~ 331 (506)
T PRK13549 254 --TIGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRN 331 (506)
T ss_pred --CCCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCC
Confidence 000124899999999953223458999999999999999999999999999999999999 59999999999986554
Q ss_pred H-HHHhcccEEEecCC---CCCc-ccHHHHhccCCC-C------CCHHHHHHHHHHhchHHHHHhCCCCccc-cccCCCC
Q 000830 1089 L-KSLRKHIALVQQEP---ALFA-TSIYENILYGKD-G------ASEGEVIEAAKLANAHSFISALPEGYST-KVGERGV 1155 (1265)
Q Consensus 1089 l-~~lR~~i~~VpQdp---~LF~-gTIreNl~~g~~-~------~sd~ei~~al~~a~l~~~i~~lp~Gldt-~vge~G~ 1155 (1265)
. +.+|++++||||+| .+|. .|+.||+.++.. . .+.++. ...+.+.++.+ |++. .......
T Consensus 332 ~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~ 404 (506)
T PRK13549 332 PQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAE-----LKTILESIQRL--KVKTASPELAIA 404 (506)
T ss_pred HHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHH-----HHHHHHHHHhc--CccCCCcccccc
Confidence 3 44678899999997 3554 599999976421 0 111111 11233444444 3321 2334456
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEE
Q 000830 1156 QLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKII 1233 (1265)
Q Consensus 1156 ~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Iv 1233 (1265)
.||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||++++|++|+++
T Consensus 405 ~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~ 484 (506)
T PRK13549 405 RLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLK 484 (506)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEE
Confidence 799999999999999999999999999999999999999999999875 47899999999999876 9999999999999
Q ss_pred EecChhhhh
Q 000830 1234 EQGTHSSLV 1242 (1265)
Q Consensus 1234 e~Gt~~eLl 1242 (1265)
..|+++++.
T Consensus 485 ~~~~~~~~~ 493 (506)
T PRK13549 485 GDLINHNLT 493 (506)
T ss_pred EEeccccCC
Confidence 999998874
No 71
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.8e-73 Score=703.30 Aligned_cols=470 Identities=27% Similarity=0.454 Sum_probs=356.9
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCCCChH
Q 000830 381 HIEFKDVSFCYPSR-PDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKGLDLK 454 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~ 454 (1265)
.++++|++++|++. .+.++|+|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|+++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 124699999999999999999999999999999999999987 799999999999876654
Q ss_pred H---Hh-hheeEEccCCc--ccc-ccHHHHhccCC---CCCCHHHHHHHHHHhcHHHHHhcCccccc---ccccCCCCCC
Q 000830 455 W---LR-QQIGLVNQEPA--LFA-TTIRENILYGK---DDATMEEITRAAKLSEAMSFISNLPERFE---TQVGERGIQL 521 (1265)
Q Consensus 455 ~---~r-~~i~~v~Q~~~--lf~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~~~g~~L 521 (1265)
. +| ++|+||+|++. +++ .|+++|+.++. ...+.++..+. +.+.++.+ |++ ........+|
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~~~~L 157 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGE-----ILNCLDRV--GIRQAAKRLTDYPHQL 157 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHC--CCCChHHHHhhCCccc
Confidence 3 33 57999999985 454 49999986431 11122221111 11222222 221 1234566789
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEE
Q 000830 522 SGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVK 598 (1265)
Q Consensus 522 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~ 598 (1265)
|||||||++|||||+.+|++||||||||+||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 158 SgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~ 237 (529)
T PRK15134 158 SGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE 237 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998874 37999999999999875 99999999999999
Q ss_pred eeCcchhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccc
Q 000830 599 TGSHEELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPAT 678 (1265)
Q Consensus 599 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (1265)
.|+++++...+...+.
T Consensus 238 ~g~~~~~~~~~~~~~~---------------------------------------------------------------- 253 (529)
T PRK15134 238 QNRAATLFSAPTHPYT---------------------------------------------------------------- 253 (529)
T ss_pred eCCHHHHhhCCCCHHH----------------------------------------------------------------
Confidence 8877655321000000
Q ss_pred hhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000830 679 AKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIE 758 (1265)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 758 (1265)
..
T Consensus 254 ------~~------------------------------------------------------------------------ 255 (529)
T PRK15134 254 ------QK------------------------------------------------------------------------ 255 (529)
T ss_pred ------HH------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 759 HLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFIL 838 (1265)
Q Consensus 759 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 838 (1265)
++ .. .+.
T Consensus 256 ------------------~~-----------~~--~~~------------------------------------------ 262 (529)
T PRK15134 256 ------------------LL-----------NS--EPS------------------------------------------ 262 (529)
T ss_pred ------------------HH-----------Hh--Ccc------------------------------------------
Confidence 00 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHH
Q 000830 839 NWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFI 918 (1265)
Q Consensus 839 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~ 918 (1265)
T Consensus 263 -------------------------------------------------------------------------------- 262 (529)
T PRK15134 263 -------------------------------------------------------------------------------- 262 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000830 919 RGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLD 998 (1265)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~ 998 (1265)
T Consensus 263 -------------------------------------------------------------------------------- 262 (529)
T PRK15134 263 -------------------------------------------------------------------------------- 262 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCCcccCCCcccEEEEeEEEECCCC--------CCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccC
Q 000830 999 RKTQVIGDIGEELTNVEGTIELRGVHFSYPSR--------PEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFY 1070 (1265)
Q Consensus 999 ~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~--------~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~ 1070 (1265)
..+. ... .+....|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|.|++
T Consensus 263 ~~~~-~~~-----~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~ 336 (529)
T PRK15134 263 GDPV-PLP-----EPASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI 336 (529)
T ss_pred cccc-ccC-----CCCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC
Confidence 0000 000 0001148999999999621 1246899999999999999999999999999999999998
Q ss_pred CCCCcEEEECCcccCCCCHHH---HhcccEEEecCC--CCCc-ccHHHHhccCCC----CCCH----HHHHHHHHHhchH
Q 000830 1071 DPTAGKVMVDGIDIKRLNLKS---LRKHIALVQQEP--ALFA-TSIYENILYGKD----GASE----GEVIEAAKLANAH 1136 (1265)
Q Consensus 1071 ~p~~G~I~idG~di~~~~l~~---lR~~i~~VpQdp--~LF~-gTIreNl~~g~~----~~sd----~ei~~al~~a~l~ 1136 (1265)
|++|+|.+||.++...+... +|++++||||+| .+|. .|++||+.++.. ..+. +.+.++++..++.
T Consensus 337 -~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 415 (529)
T PRK15134 337 -NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLD 415 (529)
T ss_pred -CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCC
Confidence 58999999999998766543 478899999998 3665 599999976421 1111 2333444444432
Q ss_pred HHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecC
Q 000830 1137 SFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHR 1214 (1265)
Q Consensus 1137 ~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHR 1214 (1265)
+ ........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+
T Consensus 416 ~----------~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd 485 (529)
T PRK15134 416 P----------ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHD 485 (529)
T ss_pred H----------HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCC
Confidence 1 122334457999999999999999999999999999999999999999999998753 7899999999
Q ss_pred chhhhc-cCEEEEEeCCEEEEecChhhhhhcCCcHH
Q 000830 1215 LSTIKN-ADQISVIESGKIIEQGTHSSLVENEDGAY 1249 (1265)
Q Consensus 1215 l~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f 1249 (1265)
++.+.. ||+|++|++|++++.|+++++++.+...|
T Consensus 486 ~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 521 (529)
T PRK15134 486 LHVVRALCHQVIVLRQGEVVEQGDCERVFAAPQQEY 521 (529)
T ss_pred HHHHHHhcCeEEEEECCEEEEEcCHHHHhcCCCChH
Confidence 999876 99999999999999999999986444333
No 72
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-73 Score=696.76 Aligned_cols=459 Identities=22% Similarity=0.388 Sum_probs=351.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH-Hhhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW-LRQQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 459 (1265)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 4899999999963 35899999999999999999999999999999999999999999999999998777654 3457
Q ss_pred eeEEccCCccccc-cHHHHhccCCCCC---------CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHH
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDDA---------TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRI 529 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~~---------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 529 (1265)
++||+|++.++.. |++||+.++.... ..++..+ + +.+.+..+ |+.........+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV--R---AAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH--H---HHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 9999999988876 9999998764210 1111111 1 12223322 233334555678999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 530 AISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 530 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999999998875 48999999999999876 99999999999998887655421
Q ss_pred CCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHH
Q 000830 608 NPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKL 687 (1265)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 687 (1265)
. .+....
T Consensus 235 ~------~~~~~~------------------------------------------------------------------- 241 (510)
T PRK09700 235 D------DIVRLM------------------------------------------------------------------- 241 (510)
T ss_pred H------HHHHHh-------------------------------------------------------------------
Confidence 0 000000
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 688 YSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGE 767 (1265)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 767 (1265)
T Consensus 242 -------------------------------------------------------------------------------- 241 (510)
T PRK09700 242 -------------------------------------------------------------------------------- 241 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 768 RLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVV 847 (1265)
Q Consensus 768 ~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l 847 (1265)
+.....+ ++
T Consensus 242 ---------------------~~~~~~~------~~-------------------------------------------- 250 (510)
T PRK09700 242 ---------------------VGRELQN------RF-------------------------------------------- 250 (510)
T ss_pred ---------------------cCCCccc------cc--------------------------------------------
Confidence 0000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000830 848 ATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFY 927 (1265)
Q Consensus 848 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (1265)
T Consensus 251 -------------------------------------------------------------------------------- 250 (510)
T PRK09700 251 -------------------------------------------------------------------------------- 250 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Q 000830 928 GISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDI 1007 (1265)
Q Consensus 928 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~ 1007 (1265)
+. . .++.. ..
T Consensus 251 -----------------------------------------------------~~--------------~-~~~~~--~~ 260 (510)
T PRK09700 251 -----------------------------------------------------NA--------------M-KENVS--NL 260 (510)
T ss_pred -----------------------------------------------------cc--------------c-ccccc--cC
Confidence 00 0 00000 00
Q ss_pred CcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCC
Q 000830 1008 GEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRL 1087 (1265)
Q Consensus 1008 ~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~ 1087 (1265)
..+..|+++|+++.|. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...
T Consensus 261 -----~~~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~ 330 (510)
T PRK09700 261 -----AHETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPR 330 (510)
T ss_pred -----CCCcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCC
Confidence 0012599999998763 279999999999999999999999999999999999999999999999998765
Q ss_pred CH-HHHhcccEEEecCC---CCCcc-cHHHHhccCCCC-----------CCHHHHHHHHHHhchHHHHHhCCCCcc-ccc
Q 000830 1088 NL-KSLRKHIALVQQEP---ALFAT-SIYENILYGKDG-----------ASEGEVIEAAKLANAHSFISALPEGYS-TKV 1150 (1265)
Q Consensus 1088 ~l-~~lR~~i~~VpQdp---~LF~g-TIreNl~~g~~~-----------~sd~ei~~al~~a~l~~~i~~lp~Gld-t~v 1150 (1265)
+. ..+|++++||||++ .+|.. |++||+.++... ....+. ...+.+.++.+ |+. ...
T Consensus 331 ~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~ 403 (510)
T PRK09700 331 SPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDE-----QRTAENQRELL--ALKCHSV 403 (510)
T ss_pred CHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHH-----HHHHHHHHHhc--CCCCCCc
Confidence 43 45678999999984 57754 999999865210 011110 01122333333 232 122
Q ss_pred cCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEe
Q 000830 1151 GERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIE 1228 (1265)
Q Consensus 1151 ge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~ 1228 (1265)
......||||||||++|||||+++|+|||||||||+||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|+
T Consensus 404 ~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~ 483 (510)
T PRK09700 404 NQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFC 483 (510)
T ss_pred cCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEE
Confidence 33345699999999999999999999999999999999999999999999864 47899999999999875 99999999
Q ss_pred CCEEEEecChhh
Q 000830 1229 SGKIIEQGTHSS 1240 (1265)
Q Consensus 1229 ~G~Ive~Gt~~e 1240 (1265)
+|++++.+++.+
T Consensus 484 ~G~i~~~~~~~~ 495 (510)
T PRK09700 484 EGRLTQILTNRD 495 (510)
T ss_pred CCEEEEEecCcc
Confidence 999999987644
No 73
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.5e-72 Score=690.50 Aligned_cols=454 Identities=23% Similarity=0.380 Sum_probs=351.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH-Hhhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW-LRQQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 459 (1265)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 45999999999999999999999999999999999999999999999999987655444 4567
Q ss_pred eeEEccCCccccc-cHHHHhccCCCC------CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDD------ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
++||+|++.++.. |++||+.++... ....+..+ .+.+.+..+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 9999999988876 999999986421 11121111 112223332 233333455678999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCc
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPN 610 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 610 (1265)
|||+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-- 231 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED-- 231 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH--
Confidence 99999999999999999999999999999998874 47899999999999875 999999999999987765443110
Q ss_pred hHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHHHHh
Q 000830 611 SAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKLYSM 690 (1265)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1265)
.+.. .
T Consensus 232 ----~~~~-----~------------------------------------------------------------------ 236 (501)
T PRK10762 232 ----SLIE-----M------------------------------------------------------------------ 236 (501)
T ss_pred ----HHHH-----H------------------------------------------------------------------
Confidence 0000 0
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 691 VRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLT 770 (1265)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 770 (1265)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T PRK10762 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 771 LRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATY 850 (1265)
Q Consensus 771 ~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~ 850 (1265)
++.. ..
T Consensus 237 -----------------~~~~--~~------------------------------------------------------- 242 (501)
T PRK10762 237 -----------------MVGR--KL------------------------------------------------------- 242 (501)
T ss_pred -----------------hcCC--Cc-------------------------------------------------------
Confidence 0000 00
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000830 851 PLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGIS 930 (1265)
Q Consensus 851 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1265)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcc
Q 000830 931 QFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIGEE 1010 (1265)
Q Consensus 931 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~ 1010 (1265)
. ...+...
T Consensus 243 ------------------------------------------------------------~------~~~~~~~------ 250 (501)
T PRK10762 243 ------------------------------------------------------------E------DQYPRLD------ 250 (501)
T ss_pred ------------------------------------------------------------c------ccccccc------
Confidence 0 0000000
Q ss_pred cCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCH-
Q 000830 1011 LTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNL- 1089 (1265)
Q Consensus 1011 ~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l- 1089 (1265)
.++.+..|+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.
T Consensus 251 ~~~~~~~l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~ 322 (501)
T PRK10762 251 KAPGEVRLKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQ 322 (501)
T ss_pred cCCCCcEEEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHH
Confidence 000011488999974 26999999999999999999999999999999999999999999999999977664
Q ss_pred HHHhcccEEEecCC---CCC-cccHHHHhccCCC-C-------CCHHHHHHHHHHhchHHHHHhCCCCcc-ccccCCCCC
Q 000830 1090 KSLRKHIALVQQEP---ALF-ATSIYENILYGKD-G-------ASEGEVIEAAKLANAHSFISALPEGYS-TKVGERGVQ 1156 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp---~LF-~gTIreNl~~g~~-~-------~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~ 1156 (1265)
+.+|++++||||+| .+| .-|++||+.++.. . .+.++.. ..+.++++.+ |++ .........
T Consensus 323 ~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~ 395 (501)
T PRK10762 323 DGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQ-----QAVSDFIRLF--NIKTPSMEQAIGL 395 (501)
T ss_pred HHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHH-----HHHHHHHHhc--CCCCCCccCchhh
Confidence 34678899999997 355 4699999976421 0 1111111 1123344443 332 223445567
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEE
Q 000830 1157 LSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIE 1234 (1265)
Q Consensus 1157 LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive 1234 (1265)
||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 396 LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~ 475 (501)
T PRK10762 396 LSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISG 475 (501)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999975 47899999999999876 99999999999999
Q ss_pred ecChhhhh
Q 000830 1235 QGTHSSLV 1242 (1265)
Q Consensus 1235 ~Gt~~eLl 1242 (1265)
.|+++++.
T Consensus 476 ~~~~~~~~ 483 (501)
T PRK10762 476 EFTREQAT 483 (501)
T ss_pred EeccccCC
Confidence 99988764
No 74
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.8e-72 Score=608.59 Aligned_cols=473 Identities=32% Similarity=0.492 Sum_probs=369.2
Q ss_pred cEEEEeEEEECCC-CCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCCCChH
Q 000830 381 HIEFKDVSFCYPS-RPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKGLDLK 454 (1265)
Q Consensus 381 ~i~~~~v~f~y~~-~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~ 454 (1265)
-++++|++.+|.. .....++++|||++++||++||||+||||||--.+.++|+++- .+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 4788998888852 2345789999999999999999999999999999999999964 479999999999988888
Q ss_pred HHhh----heeEEccCCc--cccc-cHHHH----hccCCCC---CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCC
Q 000830 455 WLRQ----QIGLVNQEPA--LFAT-TIREN----ILYGKDD---ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQ 520 (1265)
Q Consensus 455 ~~r~----~i~~v~Q~~~--lf~~-ti~~n----i~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 520 (1265)
.+|+ +|++++|||. |-+- ||..- |.+-+.- +..+++.+.++.. .+|+ -...+...+.+
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~V-------gI~~-p~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELV-------GIPE-PEKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHc-------CCCc-hhhhhhhCCcc
Confidence 8775 7999999995 3322 55444 4332211 1112222222222 2333 23345677889
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEE
Q 000830 521 LSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIV 597 (1265)
Q Consensus 521 LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~ 597 (1265)
|||||||||.||.||+.+|++||-||||.|||...+.+|.+.|+++.+ |..+++|||+|..++. ||||+||.+|+++
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 999999999999999999999999999999999999999999998853 8999999999999987 9999999999999
Q ss_pred EeeCcchhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCcc
Q 000830 598 KTGSHEELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPA 677 (1265)
Q Consensus 598 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (1265)
|.|+.+++.+.+...|.+..-..+ .. ..+
T Consensus 238 E~~~t~~lF~~PqHpYTr~Ll~ae------P~------g~~--------------------------------------- 266 (534)
T COG4172 238 ETGTTETLFAAPQHPYTRKLLAAE------PS------GDP--------------------------------------- 266 (534)
T ss_pred ecCcHHHHhhCCCChHHHHHHhcC------CC------CCC---------------------------------------
Confidence 999999888877666654321100 00 000
Q ss_pred chhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000830 678 TAKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAI 757 (1265)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 757 (1265)
T Consensus 267 -------------------------------------------------------------------------------- 266 (534)
T COG4172 267 -------------------------------------------------------------------------------- 266 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 758 EHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFI 837 (1265)
Q Consensus 758 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~ 837 (1265)
T Consensus 267 -------------------------------------------------------------------------------- 266 (534)
T COG4172 267 -------------------------------------------------------------------------------- 266 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHH
Q 000830 838 LNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSF 917 (1265)
Q Consensus 838 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~ 917 (1265)
T Consensus 267 -------------------------------------------------------------------------------- 266 (534)
T COG4172 267 -------------------------------------------------------------------------------- 266 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000830 918 IRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVL 997 (1265)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~ 997 (1265)
T Consensus 267 -------------------------------------------------------------------------------- 266 (534)
T COG4172 267 -------------------------------------------------------------------------------- 266 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCCCcccCCCcccEEEEeEEEECCCC--------CCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhcc
Q 000830 998 DRKTQVIGDIGEELTNVEGTIELRGVHFSYPSR--------PEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRF 1069 (1265)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~--------~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl 1069 (1265)
.+.+...+..++.+||...||-+ ....+.+++||+.++||++||||+|||||||+-++|+|+
T Consensus 267 ----------~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL 336 (534)
T COG4172 267 ----------PPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRL 336 (534)
T ss_pred ----------CCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhh
Confidence 00000001123334444443311 112478999999999999999999999999999999999
Q ss_pred CCCCCcEEEECCcccCCCCHHH---HhcccEEEecCCC--CC-cccHHHHhccC----CCCCC----HHHHHHHHHHhch
Q 000830 1070 YDPTAGKVMVDGIDIKRLNLKS---LRKHIALVQQEPA--LF-ATSIYENILYG----KDGAS----EGEVIEAAKLANA 1135 (1265)
Q Consensus 1070 ~~p~~G~I~idG~di~~~~l~~---lR~~i~~VpQdp~--LF-~gTIreNl~~g----~~~~s----d~ei~~al~~a~l 1135 (1265)
.+++ |+|.++|.||...+.+. +|+++-+|+|||+ |= .-||.+-|.=| .+..+ ++.+.+|++.+|+
T Consensus 337 ~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGL 415 (534)
T COG4172 337 IPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGL 415 (534)
T ss_pred cCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCC
Confidence 9876 99999999999888665 7899999999997 22 23666555433 23333 4567788888877
Q ss_pred HHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEec
Q 000830 1136 HSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAH 1213 (1265)
Q Consensus 1136 ~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaH 1213 (1265)
+.-... .-...+|||||||||||||++-+|++++|||||||||-.-.+.|.+.++++.+ +-+-++|+|
T Consensus 416 Dp~~r~----------RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISH 485 (534)
T COG4172 416 DPATRN----------RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISH 485 (534)
T ss_pred ChhHhh----------cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 654332 23467999999999999999999999999999999999999999999998764 569999999
Q ss_pred Cchhhhc-cCEEEEEeCCEEEEecChhhhhhcCCcHHHHHH
Q 000830 1214 RLSTIKN-ADQISVIESGKIIEQGTHSSLVENEDGAYFKLI 1253 (1265)
Q Consensus 1214 Rl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~ 1253 (1265)
+|..++. ||+|+||.+|+|||+|+-+++++++...|.+-.
T Consensus 486 DL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~L 526 (534)
T COG4172 486 DLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTRAL 526 (534)
T ss_pred cHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHHHH
Confidence 9999997 999999999999999999999999988887654
No 75
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=8.2e-70 Score=731.31 Aligned_cols=500 Identities=18% Similarity=0.248 Sum_probs=405.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 113 AILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLG 192 (1265)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~ 192 (1265)
+..++.+++.+++.+.+.+...++|.++++++++.|++||++ .++|++++|+++|++.+++.+...+..++..++.+++
T Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~-~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~ 1015 (1490)
T TIGR01271 937 SVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT-MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLG 1015 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566777778888899999999999999999999999998 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHH
Q 000830 193 GFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALS 272 (1265)
Q Consensus 193 ~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~ 272 (1265)
.++++++++|.++++++.++.+++++..++.+..+...+......+.+.+.+.|+++|+.+||+|++|+.+.+++.+..+
T Consensus 1016 ~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~ 1095 (1490)
T TIGR01271 1016 AIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALN 1095 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHH
Confidence 99999999997765444333333334445555555566666677788899999999999999999999999999999877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 000830 273 NTYKYGRKAGLAKGLGLGSMHCVLFLSWS--LLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKA 350 (1265)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 350 (1265)
...+..........+......++..+..+ ++++++. .....|.+...+.+.+....++..+...+..+..++.
T Consensus 1096 ~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-----~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~ 1170 (1490)
T TIGR01271 1096 LHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGT-----NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMR 1170 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443332222222221112221111111 1112222 1223333333333334444566677777888899999
Q ss_pred HHHHHHHHhcccccccccccc----------------CCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEE
Q 000830 351 AAYPIFEMIERDTMSKASSKT----------------GRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVA 414 (1265)
Q Consensus 351 a~~ri~~~l~~~~~~~~~~~~----------------~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ 414 (1265)
|.+|+.++++.+++....... ..+.++..|.|+|+||+|+|++. .+++|+|+||+|+|||++|
T Consensus 1171 s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~Gekva 1249 (1490)
T TIGR01271 1171 SVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVG 1249 (1490)
T ss_pred HHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEE
Confidence 999999999765543211000 00112445789999999999753 3579999999999999999
Q ss_pred EEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHH
Q 000830 415 LVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAA 494 (1265)
Q Consensus 415 ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~ 494 (1265)
|||+||||||||+++|+|+++ ++|+|.|||+|+++++.+++|++|+||||+|.||+|||||||.... ..+++++++|+
T Consensus 1250 IvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~aL 1327 (1490)
T TIGR01271 1250 LLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWKVA 1327 (1490)
T ss_pred EECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHHHH
Confidence 999999999999999999997 7999999999999999999999999999999999999999997643 56899999999
Q ss_pred HHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEE
Q 000830 495 KLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVV 574 (1265)
Q Consensus 495 ~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~ 574 (1265)
+.+++.+++..+|+|+||.+||+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+
T Consensus 1328 ~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~ 1407 (1490)
T TIGR01271 1328 EEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVIL 1407 (1490)
T ss_pred HHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred EccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHHHHH
Q 000830 575 VAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQLQEA 622 (1265)
Q Consensus 575 itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 622 (1265)
||||++++.+||+|+||++|+|+|.|+|++|+++ ++.|+++++.+..
T Consensus 1408 IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1408 SEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAADR 1454 (1490)
T ss_pred EecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhCh
Confidence 9999999999999999999999999999999975 8899999876543
No 76
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.6e-72 Score=694.18 Aligned_cols=457 Identities=25% Similarity=0.466 Sum_probs=346.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhcc--CCCcceEEEC---------------
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFY--EPLSGEILLD--------------- 444 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~~~--------------- 444 (1265)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFDG---KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEECC---eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 578999999963 35999999999999999999999999999999999996 7999999997
Q ss_pred --------CeeCC-------CCC---hHHHhhheeEEccC-Cccccc-cHHHHhccCCCC--CCHHHHHHHHHHhcHHHH
Q 000830 445 --------GNNIK-------GLD---LKWLRQQIGLVNQE-PALFAT-TIRENILYGKDD--ATMEEITRAAKLSEAMSF 502 (1265)
Q Consensus 445 --------g~~~~-------~~~---~~~~r~~i~~v~Q~-~~lf~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~ 502 (1265)
|.++. ..+ ...+|+.++||+|+ +.+|+. |++||+.++... ...++..+ .+.+.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~ 152 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVG-----RAVDL 152 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHH
Confidence 32221 111 13457789999998 577765 999999875321 12222111 11122
Q ss_pred HhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCch
Q 000830 503 ISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLS 580 (1265)
Q Consensus 503 i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~ 580 (1265)
+..+ |++........+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|+++. .|+|+|+|||+++
T Consensus 153 l~~~--gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~ 230 (520)
T TIGR03269 153 IEMV--QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE 230 (520)
T ss_pred HHHc--CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH
Confidence 3322 33334456678899999999999999999999999999999999999999999998874 3799999999999
Q ss_pred hhhc-cCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcc
Q 000830 581 TIRN-ADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFR 659 (1265)
Q Consensus 581 ~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1265)
.+.. ||+|++|++|++++.|+++++... +.
T Consensus 231 ~~~~~~d~i~~l~~G~i~~~g~~~~~~~~----~~--------------------------------------------- 261 (520)
T TIGR03269 231 VIEDLSDKAIWLENGEIKEEGTPDEVVAV----FM--------------------------------------------- 261 (520)
T ss_pred HHHHhcCEEEEEeCCEEeeecCHHHHHHH----HH---------------------------------------------
Confidence 9875 999999999999876654332100 00
Q ss_pred cchhhhcccCCCCCCCccchhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHH
Q 000830 660 SEKESVLSHGAADATEPATAKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKK 739 (1265)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1265)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHH
Q 000830 740 ITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRST 819 (1265)
Q Consensus 740 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~ 819 (1265)
. .
T Consensus 262 --------------------------------------------------~---~------------------------- 263 (520)
T TIGR03269 262 --------------------------------------------------E---G------------------------- 263 (520)
T ss_pred --------------------------------------------------h---h-------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHH
Q 000830 820 ILIQNFGLVTASFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSED 899 (1265)
Q Consensus 820 ~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~ 899 (1265)
+ .
T Consensus 264 --------------------~------------------------~---------------------------------- 265 (520)
T TIGR03269 264 --------------------V------------------------S---------------------------------- 265 (520)
T ss_pred --------------------c------------------------h----------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 900 KVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLAL 979 (1265)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 979 (1265)
.
T Consensus 266 --------------~----------------------------------------------------------------- 266 (520)
T TIGR03269 266 --------------E----------------------------------------------------------------- 266 (520)
T ss_pred --------------h-----------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCcccCCCcccEEEEeEEEECCC--CCCcccccceeEEEeCCcEEEEEcCCCC
Q 000830 980 VPDLLKGNQMAASVFEVLDRKTQVIGDIGEELTNVEGTIELRGVHFSYPS--RPEVVIFKDFNLKVRAGKSMALVGQSGS 1057 (1265)
Q Consensus 980 ~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~--~~~~~vL~~isl~I~~Ge~vaIVG~SGS 1057 (1265)
. ...... . .....|+++||+++|++ +...++|+|+||+|++||++||+|||||
T Consensus 267 ---~--------------~~~~~~--~------~~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGs 321 (520)
T TIGR03269 267 ---V--------------EKECEV--E------VGEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGA 321 (520)
T ss_pred ---h--------------cccccc--C------CCCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCC
Confidence 0 000000 0 00124999999999963 1124689999999999999999999999
Q ss_pred ChHHHHHHHhccCCCCCcEEEEC-Ccc---cCCCC---HHHHhcccEEEecCCCCCcc-cHHHHhccCCC-CCCH----H
Q 000830 1058 GKSTVLSLILRFYDPTAGKVMVD-GID---IKRLN---LKSLRKHIALVQQEPALFAT-SIYENILYGKD-GASE----G 1124 (1265)
Q Consensus 1058 GKSTL~~lL~rl~~p~~G~I~id-G~d---i~~~~---l~~lR~~i~~VpQdp~LF~g-TIreNl~~g~~-~~sd----~ 1124 (1265)
|||||+++|.|+++|++|+|.++ |.+ +...+ ...+|++++||||++.+|.. |++||+.++.. .... +
T Consensus 322 GKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~ 401 (520)
T TIGR03269 322 GKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARM 401 (520)
T ss_pred CHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHH
Confidence 99999999999999999999996 643 33332 23567789999999988874 99999975311 1111 2
Q ss_pred HHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC
Q 000830 1125 EVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR 1204 (1265)
Q Consensus 1125 ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~ 1204 (1265)
++.++++..++.+. ..+.........||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+
T Consensus 402 ~~~~~l~~~~l~~~------~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~ 475 (520)
T TIGR03269 402 KAVITLKMVGFDEE------KAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKARE 475 (520)
T ss_pred HHHHHHHhCCCCCc------cchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH
Confidence 23344444443210 000012334457999999999999999999999999999999999999999999998753
Q ss_pred --CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1205 --KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1205 --~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 476 ~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 476 EMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred HcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 7899999999999976 99999999999999999998865
No 77
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-70 Score=693.84 Aligned_cols=510 Identities=23% Similarity=0.317 Sum_probs=427.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHH
Q 000830 102 KYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVG 181 (1265)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~ 181 (1265)
.+...+.+++++..++..++.+.+...+.+.+.++..++++++++-|++|||. +++|.|+||+++|++.+++.+...+.
T Consensus 859 ~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt-TP~GRILNRFSkD~~~vD~~Lp~~~~ 937 (1381)
T KOG0054|consen 859 FYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT-TPTGRILNRFSKDIDTVDVLLPFTLE 937 (1381)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC-CCccchhhhcccchHHHHHhhHHHHH
Confidence 45566777777888888888999999999999999999999999999999998 59999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 000830 182 NFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGED 261 (1265)
Q Consensus 182 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~ 261 (1265)
.++..++.+++.++++.+..|...++++.+..+.+.+..++.+-.+...+-.....+-..+++.|+++|+.|||+|+.|+
T Consensus 938 ~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~ 1017 (1381)
T KOG0054|consen 938 FFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEE 1017 (1381)
T ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccH
Confidence 99999999999999999999977766665555555566666666666666566666777889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhh
Q 000830 262 KAVKVYKEALSNTYKYG---RKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQA 338 (1265)
Q Consensus 262 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~ 338 (1265)
++.+++.+..+...+.. ....+|.++..-++..+..+..++ +.. +...+..++|.+--.+.+.+.....+...
T Consensus 1018 rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al---~~v-l~~~~~~~~g~vGLslsyal~lt~~l~~~ 1093 (1381)
T KOG0054|consen 1018 RFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAAL---FAV-LLPSGLISPGLVGLSLSYALQLTGLLQWL 1093 (1381)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH-HccCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999988776655443 333444444433332222111111 111 11122144565544455666666667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccc--CCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEE
Q 000830 339 APDITAFIRAKAAAYPIFEMIERDTMSKASSKT--GRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALV 416 (1265)
Q Consensus 339 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~iv 416 (1265)
......+...++|.+|+.++.+.++|.+...+. .++.++.+|.|+|+|++.+|.+. ..+||+||||+|+|||++|||
T Consensus 1094 vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIV 1172 (1381)
T KOG0054|consen 1094 VRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIV 1172 (1381)
T ss_pred HHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEe
Confidence 888888899999999999999866551111111 23446778999999999999754 357999999999999999999
Q ss_pred cCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHH
Q 000830 417 GGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKL 496 (1265)
Q Consensus 417 G~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~ 496 (1265)
|++|||||||+++|.|+.+|.+|+|.|||.|+.++.+++||++++.+||||.||+||+|.|+-= ..+.+|+++++|++.
T Consensus 1173 GRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDP-f~e~sD~~IW~ALe~ 1251 (1381)
T KOG0054|consen 1173 GRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDP-FDEYSDDEIWEALER 1251 (1381)
T ss_pred CCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCc-ccccCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999862 235789999999999
Q ss_pred hcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEc
Q 000830 497 SEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVA 576 (1265)
Q Consensus 497 ~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~it 576 (1265)
+++.+++.++|+|+|+.|.|+|.|+|-||||-+||||||+++++||+||||||++|++|...||+.|++..+++|||.|+
T Consensus 1252 ~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIA 1331 (1381)
T KOG0054|consen 1252 CQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIA 1331 (1381)
T ss_pred hChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHH
Q 000830 577 HRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQ 618 (1265)
Q Consensus 577 H~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 618 (1265)
||++++.++|||+|||+|+|+|.|+|.+|++++++.|+++..
T Consensus 1332 HRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1332 HRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLK 1373 (1381)
T ss_pred eccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHH
Confidence 999999999999999999999999999999987888875543
No 78
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-72 Score=687.29 Aligned_cols=456 Identities=25% Similarity=0.390 Sum_probs=347.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh-HHHhhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL-KWLRQQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~ 459 (1265)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+|++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 359999999999999999999999999999999999999999999999999875543 456788
Q ss_pred eeEEccCCccccc-cHHHHhccCCCC-----CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDD-----ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
|+||+|++.+|+. |++||+.++... ....+..+ .+.+.+..+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY-----EAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH-----HHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 9999999998876 999999986421 11222111 122233333 2332334566789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCch
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNS 611 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 611 (1265)
||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.++..+....
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~--- 230 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVDR--- 230 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCCH---
Confidence 9999999999999999999999999999998875 48999999999999866 999999999999864421100000
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHHHHhh
Q 000830 612 AYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKLYSMV 691 (1265)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1265)
..+.
T Consensus 231 --~~~~-------------------------------------------------------------------------- 234 (501)
T PRK11288 231 --DQLV-------------------------------------------------------------------------- 234 (501)
T ss_pred --HHHH--------------------------------------------------------------------------
Confidence 0000
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 692 RPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLTL 771 (1265)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 771 (1265)
T Consensus 235 -------------------------------------------------------------------------------- 234 (501)
T PRK11288 235 -------------------------------------------------------------------------------- 234 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 772 RVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATYP 851 (1265)
Q Consensus 772 ~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~p 851 (1265)
..+ ... +.
T Consensus 235 -------~~~-------~~~---~~------------------------------------------------------- 242 (501)
T PRK11288 235 -------QAM-------VGR---EI------------------------------------------------------- 242 (501)
T ss_pred -------HHh-------cCC---Cc-------------------------------------------------------
Confidence 000 000 00
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000830 852 LIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQ 931 (1265)
Q Consensus 852 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1265)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccc
Q 000830 932 FFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIGEEL 1011 (1265)
Q Consensus 932 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~ 1011 (1265)
.+ .....+.
T Consensus 243 -----------------------------------------------------------~~---~~~~~~~--------- 251 (501)
T PRK11288 243 -----------------------------------------------------------GD---IYGYRPR--------- 251 (501)
T ss_pred -----------------------------------------------------------cc---ccccccc---------
Confidence 00 0000000
Q ss_pred CCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCC-HH
Q 000830 1012 TNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLN-LK 1090 (1265)
Q Consensus 1012 ~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~-l~ 1090 (1265)
++.+..++++|+++. .+++|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+ .+
T Consensus 252 ~~~~~~l~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~ 324 (501)
T PRK11288 252 PLGEVRLRLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRD 324 (501)
T ss_pred CCCCcEEEEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHH
Confidence 000124889999732 3799999999999999999999999999999999999999999999999987543 34
Q ss_pred HHhcccEEEecCCC---CC-cccHHHHhccCCCCC--------CHHHHHHHHHHhchHHHHHhCCCCcc-ccccCCCCCC
Q 000830 1091 SLRKHIALVQQEPA---LF-ATSIYENILYGKDGA--------SEGEVIEAAKLANAHSFISALPEGYS-TKVGERGVQL 1157 (1265)
Q Consensus 1091 ~lR~~i~~VpQdp~---LF-~gTIreNl~~g~~~~--------sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~L 1157 (1265)
.+|++++|+||+|. +| ..|+.||+.++.... ...+-. ..+.+++..+ |++ ........+|
T Consensus 325 ~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~L 397 (501)
T PRK11288 325 AIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEA-----ENADRFIRSL--NIKTPSREQLIMNL 397 (501)
T ss_pred HHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHH-----HHHHHHHHhc--CcccCCccCccccC
Confidence 56789999999973 55 479999997642110 111111 1122333333 231 1223334579
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 000830 1158 SGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR-KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQ 1235 (1265)
Q Consensus 1158 SgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~ 1235 (1265)
|||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 398 SgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~ 477 (501)
T PRK11288 398 SGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGE 477 (501)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999988754 7899999999999976 999999999999999
Q ss_pred cChhhhh
Q 000830 1236 GTHSSLV 1242 (1265)
Q Consensus 1236 Gt~~eLl 1242 (1265)
|+++|..
T Consensus 478 ~~~~~~~ 484 (501)
T PRK11288 478 LAREQAT 484 (501)
T ss_pred EccccCC
Confidence 9998765
No 79
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=9.1e-72 Score=684.72 Aligned_cols=460 Identities=23% Similarity=0.377 Sum_probs=348.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC--CcceEEECCeeCCCCChHH-Hhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP--LSGEILLDGNNIKGLDLKW-LRQ 458 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~~~~~~~~~-~r~ 458 (1265)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 689999999963 3599999999999999999999999999999999999987 7999999999998776544 456
Q ss_pred heeEEccCCccccc-cHHHHhccCCCC------CCHHHHHHHHHHhcHHHHHhcCcccccccc-cCCCCCCChHHHHHHH
Q 000830 459 QIGLVNQEPALFAT-TIRENILYGKDD------ATMEEITRAAKLSEAMSFISNLPERFETQV-GERGIQLSGGQKQRIA 530 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-~~~g~~LSgGqkqria 530 (1265)
+|+||+|++.++.. |++||+.++... ...++..+ .+.+.++.+ |++... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL-----RAKNLLREL--QLDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccCchhhCCHHHHHHHH
Confidence 79999999988876 999999886421 11122111 122233333 222111 2335689999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 531 ISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 531 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 9999999999999999999999999999999998874 48899999999999876 999999999999876543221000
Q ss_pred CchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHHH
Q 000830 609 PNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKLY 688 (1265)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (1265)
....
T Consensus 232 ------~~~~---------------------------------------------------------------------- 235 (500)
T TIGR02633 232 ------DIIT---------------------------------------------------------------------- 235 (500)
T ss_pred ------HHHH----------------------------------------------------------------------
Confidence 0000
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 689 SMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGER 768 (1265)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 768 (1265)
.
T Consensus 236 --------------------------------~----------------------------------------------- 236 (500)
T TIGR02633 236 --------------------------------M----------------------------------------------- 236 (500)
T ss_pred --------------------------------H-----------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 769 LTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVA 848 (1265)
Q Consensus 769 ~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~ 848 (1265)
++.. +.
T Consensus 237 -------------------~~~~---~~---------------------------------------------------- 242 (500)
T TIGR02633 237 -------------------MVGR---EI---------------------------------------------------- 242 (500)
T ss_pred -------------------HhCc---cc----------------------------------------------------
Confidence 0000 00
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000830 849 TYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYG 928 (1265)
Q Consensus 849 ~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1265)
T Consensus 243 -------------------------------------------------------------------------------- 242 (500)
T TIGR02633 243 -------------------------------------------------------------------------------- 242 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC
Q 000830 929 ISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIG 1008 (1265)
Q Consensus 929 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~ 1008 (1265)
. . . .+.. . .
T Consensus 243 ----------------------------------------------------~----------~---~--~~~~-~--~- 251 (500)
T TIGR02633 243 ----------------------------------------------------T----------S---L--YPHE-P--H- 251 (500)
T ss_pred ----------------------------------------------------c----------c---c--cccc-c--c-
Confidence 0 0 0 0000 0 0
Q ss_pred cccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-CCcEEEECCcccCCC
Q 000830 1009 EELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-TAGKVMVDGIDIKRL 1087 (1265)
Q Consensus 1009 ~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-~~G~I~idG~di~~~ 1087 (1265)
. ..+..|+++|++++|+..++..+|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...
T Consensus 252 ~---~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~ 328 (500)
T TIGR02633 252 E---IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIR 328 (500)
T ss_pred C---CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCC
Confidence 0 001148999999999532223589999999999999999999999999999999999995 899999999998654
Q ss_pred C-HHHHhcccEEEecCC---CCCc-ccHHHHhccCCCC-------CCHHHHHHHHHHhchHHHHHhCCCCccc-cccCCC
Q 000830 1088 N-LKSLRKHIALVQQEP---ALFA-TSIYENILYGKDG-------ASEGEVIEAAKLANAHSFISALPEGYST-KVGERG 1154 (1265)
Q Consensus 1088 ~-l~~lR~~i~~VpQdp---~LF~-gTIreNl~~g~~~-------~sd~ei~~al~~a~l~~~i~~lp~Gldt-~vge~G 1154 (1265)
+ ...+|++++||||++ .+|. .|+++|+.++... ...++. ...+.++++.+ |+.. ......
T Consensus 329 ~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~ 401 (500)
T TIGR02633 329 NPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAE-----LQIIGSAIQRL--KVKTASPFLPI 401 (500)
T ss_pred CHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHH-----HHHHHHHHHhc--CccCCCccCcc
Confidence 3 356788999999996 3665 5999999874210 111111 11122333333 2221 123334
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEE
Q 000830 1155 VQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKI 1232 (1265)
Q Consensus 1155 ~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~I 1232 (1265)
..||||||||++|||||+++|++|||||||++||+.+.+.+++.|++.. ++.|+|+|||+++.+.. ||+|++|++|++
T Consensus 402 ~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i 481 (500)
T TIGR02633 402 GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKL 481 (500)
T ss_pred ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 5699999999999999999999999999999999999999999998875 47899999999999976 999999999999
Q ss_pred EEecChhhh
Q 000830 1233 IEQGTHSSL 1241 (1265)
Q Consensus 1233 ve~Gt~~eL 1241 (1265)
+..++.+++
T Consensus 482 ~~~~~~~~~ 490 (500)
T TIGR02633 482 KGDFVNHAL 490 (500)
T ss_pred EEEEccccC
Confidence 988866544
No 80
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=8.5e-69 Score=708.37 Aligned_cols=220 Identities=25% Similarity=0.430 Sum_probs=186.3
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
..|+++|+++.|++. ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +...+|++
T Consensus 927 ~~L~I~nLsK~y~~~-~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPS-GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecCC-CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 469999999999632 3569999999999999999999999999999999999999999999999999864 45677889
Q ss_pred eeEEccCCccccc-cHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
+|||||++.+|+. |++|||.++.. ..+.++..+ .+.+.++.+ |++........+||||||||++|||||+
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi 1077 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFV 1077 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999999976 99999987521 112222211 112223332 3444456677889999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 537 KNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
.+|+|+|||||||+||+.+++.+.+.|+++.+|+|+|++||+++.+.. ||||++|++|++++.|+.++|.++
T Consensus 1078 ~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~ 1150 (2272)
T TIGR01257 1078 GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNC 1150 (2272)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHh
Confidence 999999999999999999999999999998789999999999999976 999999999999999999888643
No 81
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.2e-71 Score=682.48 Aligned_cols=465 Identities=23% Similarity=0.388 Sum_probs=354.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHh-hh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLR-QQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r-~~ 459 (1265)
.|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 5999999999963 3589999999999999999999999999999999999999999999999999877766554 46
Q ss_pred eeEEccCCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
++||+|++.++.. |++||+.++.... .+..+. +.+.+..+ |++........+||||||||++|||||+.+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~--~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~~ 158 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKR--QASMQK-----MKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMRD 158 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccc--hHHHHH-----HHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHcC
Confidence 9999999998876 9999999875321 111111 11222222 233334455678999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCchHHHHH
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNSAYAAL 616 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 616 (1265)
|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++... .....+
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~--~~~~~~ 236 (510)
T PRK15439 159 SRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD--DIIQAI 236 (510)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH--HHHHHH
Confidence 99999999999999999999999998875 48999999999999865 999999999999999987765421 000000
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHHHHhhchhhH
Q 000830 617 VQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKLYSMVRPDWT 696 (1265)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (1265)
. . .. ..
T Consensus 237 ~------~----~~----~~------------------------------------------------------------ 242 (510)
T PRK15439 237 T------P----AA----RE------------------------------------------------------------ 242 (510)
T ss_pred h------C----cc----cc------------------------------------------------------------
Confidence 0 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 697 YGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREK 776 (1265)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~ 776 (1265)
T Consensus 243 -------------------------------------------------------------------------------- 242 (510)
T PRK15439 243 -------------------------------------------------------------------------------- 242 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 777 MFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATYPLIISG 856 (1265)
Q Consensus 777 l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~ 856 (1265)
.. ..+. +
T Consensus 243 -------------~~-~~~~---------~-------------------------------------------------- 249 (510)
T PRK15439 243 -------------KS-LSAS---------Q-------------------------------------------------- 249 (510)
T ss_pred -------------cc-cccc---------c--------------------------------------------------
Confidence 00 0000 0
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 857 HISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFS 936 (1265)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1265)
.
T Consensus 250 ---------------------------------------------------------~---------------------- 250 (510)
T PRK15439 250 ---------------------------------------------------------K---------------------- 250 (510)
T ss_pred ---------------------------------------------------------c----------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccCCCcc
Q 000830 937 SYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIGEELTNVEG 1016 (1265)
Q Consensus 937 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~g 1016 (1265)
. . ...+.... . .++.+.
T Consensus 251 --------------------------------------------------------~-~-~~~~~~~~-~----~~~~~~ 267 (510)
T PRK15439 251 --------------------------------------------------------L-W-LELPGNRR-Q----QAAGAP 267 (510)
T ss_pred --------------------------------------------------------c-c-cccccccc-c----cCCCCc
Confidence 0 0 00000000 0 000112
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH-Hhcc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS-LRKH 1095 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~ 1095 (1265)
.|+++|++. .+|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.++|.++...+... +|++
T Consensus 268 ~l~~~~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 339 (510)
T PRK15439 268 VLTVEDLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARG 339 (510)
T ss_pred eEEEeCCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 488999983 1599999999999999999999999999999999999999999999999998776554 4678
Q ss_pred cEEEecCC---CCCc-ccHHHHhccCC----CC-CCHHHHHHHHHHhchHHHHHhCCCCcc-ccccCCCCCCChhHHHHH
Q 000830 1096 IALVQQEP---ALFA-TSIYENILYGK----DG-ASEGEVIEAAKLANAHSFISALPEGYS-TKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1096 i~~VpQdp---~LF~-gTIreNl~~g~----~~-~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~LSgGQkQrl 1165 (1265)
++||||++ .+|. .|+.+|+.... +. ....+.. ..+.++++.+ |++ .........||||||||+
T Consensus 340 i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~kqrl 412 (510)
T PRK15439 340 LVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAREN-----AVLERYRRAL--NIKFNHAEQAARTLSGGNQQKV 412 (510)
T ss_pred cEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHH-----HHHHHHHHHc--CCCCCCccCccccCCcHHHHHH
Confidence 99999996 3665 49999985320 10 0111111 1123334443 332 233444457999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
+|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 413 ~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 492 (510)
T PRK15439 413 LIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAINV 492 (510)
T ss_pred HHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCCH
Confidence 99999999999999999999999999999999999875 47899999999999976 99999999999999999988764
No 82
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.2e-69 Score=669.38 Aligned_cols=531 Identities=16% Similarity=0.162 Sum_probs=427.3
Q ss_pred HHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 684 AIKLYSMVR-PDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSF 762 (1265)
Q Consensus 684 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 762 (1265)
.+.++.+.+ ++|+.+..+++++++.+.........+...+... ..... .....++++.++..++.++..++.
T Consensus 5 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 77 (555)
T TIGR01194 5 IGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEE-----NFLGQ--GSLFSFGGLCLLALLFRIGADIFP 77 (555)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----Ccccc--hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777 8888877777777666655444444443333211 00000 111223344555667788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 763 GIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRI 842 (1265)
Q Consensus 763 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 842 (1265)
...+.+...++|.++|+++++.|+.||++ +++|++++|+++|++.++..+.. +..++..+..++++++++++++|.+
T Consensus 78 ~~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L 154 (555)
T TIGR01194 78 AYAGMHIIANLRIALCEKILGAPIEEIDR--RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPM 154 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHh--cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999996 78999999999999999998864 6777777888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHH--HHHHHHHHHHHhHHHHHHHHH
Q 000830 843 TLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSED--KVLELYSRELVEPSKRSFIRG 920 (1265)
Q Consensus 843 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~--~~~~~~~~~~~~~~~~~~~~~ 920 (1265)
++++++.+|+.++...+..+..++...+.++...+.++.+.|.+.|++++|+|+.++ ...+++.+..++..+...+..
T Consensus 155 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (555)
T TIGR01194 155 FAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEI 234 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999988888877766666555566666677777888899999999999999999954 556777777777766665555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000830 921 QIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRK 1000 (1265)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~ 1000 (1265)
........+..++.....++.++++... +.++.+.+++...+......++..+......+..+..+.+|+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~ 311 (555)
T TIGR01194 235 LIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERF 311 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4444444444444444444445555443 5788898888888888888999999999999999999999999997532
Q ss_pred cc--ccC--CC-Cc----ccCCCcccEEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhcc
Q 000830 1001 TQ--VIG--DI-GE----ELTNVEGTIELRGVHFSYPSRP--EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRF 1069 (1265)
Q Consensus 1001 ~~--~~~--~~-~~----~~~~~~g~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl 1069 (1265)
.+ ... .. .. +.+...+.|+|+||+|+|++.+ +.++|+|+||+|++||++|||||||||||||+++|.|+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~ 391 (555)
T TIGR01194 312 NEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGL 391 (555)
T ss_pred ccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCC
Confidence 11 110 00 00 1112246899999999997532 23689999999999999999999999999999999999
Q ss_pred CCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCcccc
Q 000830 1070 YDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTK 1149 (1265)
Q Consensus 1070 ~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~ 1149 (1265)
|+|++|+|.+||+|+++++.+++|+++++|||||++|++|+++|+ .++.++++++++++.+++++++.++|+||||.
T Consensus 392 ~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~ 468 (555)
T TIGR01194 392 YIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT 468 (555)
T ss_pred CCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccCCc
Confidence 999999999999999999999999999999999999999999995 45678999999999999999999999999995
Q ss_pred ccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHH-H-cCCceEEEEecCchhhhccCEEEEE
Q 000830 1150 VGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQR-L-MRKRTTIIVAHRLSTIKNADQISVI 1227 (1265)
Q Consensus 1150 vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~-~-~~~~TvI~IaHRl~ti~~~DrI~vl 1227 (1265)
.+|||||||||+||||++++|+|||||||||+||++||+.+++.+.+ . .+++|+|+||||++++..||+|+||
T Consensus 469 -----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l 543 (555)
T TIGR01194 469 -----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKL 543 (555)
T ss_pred -----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEE
Confidence 68999999999999999999999999999999999999999987743 3 4689999999999999999999999
Q ss_pred eCCEEEEe
Q 000830 1228 ESGKIIEQ 1235 (1265)
Q Consensus 1228 ~~G~Ive~ 1235 (1265)
++|+++|.
T Consensus 544 ~~G~i~~~ 551 (555)
T TIGR01194 544 AAGCIVKD 551 (555)
T ss_pred ECCEEEEe
Confidence 99999874
No 83
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=8.9e-70 Score=607.86 Aligned_cols=499 Identities=24% Similarity=0.337 Sum_probs=450.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHH
Q 000830 737 VKKITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVD 816 (1265)
Q Consensus 737 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~ 816 (1265)
.....++.+++.++..++.+++.+++.+.+.++..+++..+|.+.+++|..- +..|+=. .--+|.++++.++..
T Consensus 62 Lv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~-----~~~g~~~-Q~LrDL~qvR~Fltg 135 (580)
T COG4618 62 LVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLR-----RGSGDGL-QPLRDLDQVRQFLTG 135 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhh-----cCCCccc-cchhhHHHHHHHHcC
Confidence 3444555566667778889999999999999999999999999998776542 2223211 123699999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhc
Q 000830 817 RSTILIQNFGLVTASFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFC 896 (1265)
Q Consensus 817 ~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~ 896 (1265)
.-...+....+..+.+.+.|.++++++++.++...+++...++..+..++...+..+...+.+.+..-+.+|.++|++.|
T Consensus 136 ~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMG 215 (580)
T COG4618 136 TGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMG 215 (580)
T ss_pred CCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhc
Confidence 88888888899999999999999999999999888888888888888888777777788888899999999999999999
Q ss_pred cHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHH
Q 000830 897 SEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGET 976 (1265)
Q Consensus 897 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 976 (1265)
+.....++|.+....+.....+..-..+.+.+++..+-.+....++.+|.+++..+++|.|.+++....+.-...++..+
T Consensus 216 M~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~a 295 (580)
T COG4618 216 MLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLA 295 (580)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHH
Confidence 99999999999888888888888888888899999999999999999999999999999999999888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCC
Q 000830 977 LALVPDLLKGNQMAASVFEVLDRKTQVIGDIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSG 1056 (1265)
Q Consensus 977 ~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SG 1056 (1265)
...+..+..+..+-+|+.+++...|.... .-+.|..+|.+.++++++.-|+. ++|+|+|+||+++|||-+||+||||
T Consensus 296 I~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~--~m~LP~P~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSg 372 (580)
T COG4618 296 IANWKQFVAARQSYKRLNELLAELPAAAE--RMPLPAPQGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSG 372 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccC--CCCCCCCCceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCC
Confidence 99999999999999999999987665432 23455668999999999977654 4689999999999999999999999
Q ss_pred CChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchH
Q 000830 1057 SGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAH 1136 (1265)
Q Consensus 1057 SGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~ 1136 (1265)
||||||.++|.|.+.|++|.|++||.|+++.+.+.+-++|||.|||..||+|||+|||.-..++.+++.|.+|++.++.|
T Consensus 373 SGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvH 452 (580)
T COG4618 373 SGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVH 452 (580)
T ss_pred ccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChH
Confidence 99999999999999999999999999999999999999999999999999999999998766789999999999999999
Q ss_pred HHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCc
Q 000830 1137 SFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRL 1215 (1265)
Q Consensus 1137 ~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl 1215 (1265)
|.|.+||+||||.|||+|..|||||||||+|||||+.+|++++||||.|+||.+-|+.+.++|.+.. +|+|+|+||||+
T Consensus 453 elIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRP 532 (580)
T COG4618 453 ELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRP 532 (580)
T ss_pred HHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCH
Confidence 9999999999999999999999999999999999999999999999999999999999999998876 689999999999
Q ss_pred hhhhccCEEEEEeCCEEEEecChhhhhhc
Q 000830 1216 STIKNADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1216 ~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
+.+..+|+|+||++|++..+|+.+|.+++
T Consensus 533 s~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 533 SALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred HHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999999999999874
No 84
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-71 Score=675.56 Aligned_cols=454 Identities=23% Similarity=0.367 Sum_probs=346.4
Q ss_pred EEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh-HHHhhheeE
Q 000830 384 FKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL-KWLRQQIGL 462 (1265)
Q Consensus 384 ~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~i~~ 462 (1265)
++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+|++++|
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 3689999963 359999999999999999999999999999999999999999999999999876554 345778999
Q ss_pred EccCCccccc-cHHHHhccCCCC-----CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 463 VNQEPALFAT-TIRENILYGKDD-----ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 463 v~Q~~~lf~~-ti~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
|+|++.++.. |++||+.++... ...++..+ .+.+.+..+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 9999988765 999999876421 11122111 122333333 3444455667889999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCchHHH
Q 000830 537 KNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNSAYA 614 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 614 (1265)
.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~------ 224 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD------ 224 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH------
Confidence 9999999999999999999999999998875 48999999999999865 999999999999987765443100
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHHHHhhchh
Q 000830 615 ALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKLYSMVRPD 694 (1265)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1265)
....
T Consensus 225 ~~~~---------------------------------------------------------------------------- 228 (491)
T PRK10982 225 KIIA---------------------------------------------------------------------------- 228 (491)
T ss_pred HHHH----------------------------------------------------------------------------
Confidence 0000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 695 WTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVR 774 (1265)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr 774 (1265)
T Consensus 229 -------------------------------------------------------------------------------- 228 (491)
T PRK10982 229 -------------------------------------------------------------------------------- 228 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 775 EKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATYPLII 854 (1265)
Q Consensus 775 ~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~ 854 (1265)
.+ +.. ..
T Consensus 229 -----~~-------~~~--~~----------------------------------------------------------- 235 (491)
T PRK10982 229 -----MM-------VGR--SL----------------------------------------------------------- 235 (491)
T ss_pred -----HH-------hCC--Cc-----------------------------------------------------------
Confidence 00 000 00
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 855 SGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFI 934 (1265)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1265)
T Consensus 236 -------------------------------------------------------------------------------- 235 (491)
T PRK10982 236 -------------------------------------------------------------------------------- 235 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccCCC
Q 000830 935 FSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIGEELTNV 1014 (1265)
Q Consensus 935 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~ 1014 (1265)
.+ ..++. . . ++.
T Consensus 236 --------------------------------------------------------~~-----~~~~~-~--~----~~~ 247 (491)
T PRK10982 236 --------------------------------------------------------TQ-----RFPDK-E--N----KPG 247 (491)
T ss_pred --------------------------------------------------------cc-----ccccc-c--C----CCC
Confidence 00 00000 0 0 001
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHH-HHh
Q 000830 1015 EGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLK-SLR 1093 (1265)
Q Consensus 1015 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~-~lR 1093 (1265)
+..|+++|++++|. ++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|
T Consensus 248 ~~~i~~~~l~~~~~-----~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 322 (491)
T PRK10982 248 EVILEVRNLTSLRQ-----PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAIN 322 (491)
T ss_pred CcEEEEeCcccccC-----cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHH
Confidence 12589999998752 489999999999999999999999999999999999999999999999999876654 457
Q ss_pred cccEEEecCCC---CCc-ccHHHH-----hccCCC--C-CCHHHHHHHHHHhchHHHHHhCCCCcc-ccccCCCCCCChh
Q 000830 1094 KHIALVQQEPA---LFA-TSIYEN-----ILYGKD--G-ASEGEVIEAAKLANAHSFISALPEGYS-TKVGERGVQLSGG 1160 (1265)
Q Consensus 1094 ~~i~~VpQdp~---LF~-gTIreN-----l~~g~~--~-~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~LSgG 1160 (1265)
+.++|+||++. +|. .|+++| +..... . .+..+..+ ...++++.+ |+. ........+||||
T Consensus 323 ~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LSgG 395 (491)
T PRK10982 323 HGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKS-----DTQWVIDSM--RVKTPGHRTQIGSLSGG 395 (491)
T ss_pred CCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHH-----HHHHHHHhc--CccCCCcccccccCCcH
Confidence 88999999963 565 467666 322111 1 11122111 122334433 221 1234444579999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecCh
Q 000830 1161 QKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTH 1238 (1265)
Q Consensus 1161 QkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~ 1238 (1265)
||||++||||++.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. |||+++|++|+++..++.
T Consensus 396 q~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~ 475 (491)
T PRK10982 396 NQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDT 475 (491)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEcc
Confidence 9999999999999999999999999999999999999998864 47899999999999976 999999999999998877
Q ss_pred hhhh
Q 000830 1239 SSLV 1242 (1265)
Q Consensus 1239 ~eLl 1242 (1265)
+++.
T Consensus 476 ~~~~ 479 (491)
T PRK10982 476 KTTT 479 (491)
T ss_pred ccCC
Confidence 6543
No 85
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=3.7e-69 Score=602.92 Aligned_cols=530 Identities=21% Similarity=0.266 Sum_probs=454.7
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 63 IGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLR 142 (1265)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~ 142 (1265)
+++.+..++....|+++-++-|.+.... ....+....++.+++.++..++.+++.....+++.++..++...+|.
T Consensus 30 lfS~~INiL~L~~~lyMLQVyDRVL~S~-----s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~ 104 (580)
T COG4618 30 LFSAVINLLALTGPLYMLQVYDRVLPSR-----SVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFA 104 (580)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhccCC-----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3444445666666778888888876422 12233334445556666777888999999999999999999999999
Q ss_pred HHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 143 SMLNQDISLFDTEASTGEVISAITSDIIVVQDALSE-KVGNFMHYISRFLGGFIIGFARVWQISLVTLSIVPLIALAGGM 221 (1265)
Q Consensus 143 ~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~ 221 (1265)
...+.+..-- ..|+=..-+ +|.++++.|++. ....++...|+. +.+.++|.+.+++.++.++...+++.+.++
T Consensus 105 a~~~~~l~~~----~~g~~~Q~L-rDL~qvR~Fltg~g~~A~fDaPW~P-~yl~v~fl~Hp~lG~~a~~ga~iLv~la~l 178 (580)
T COG4618 105 ASFSAPLLRR----GSGDGLQPL-RDLDQVRQFLTGTGLTAFFDAPWMP-LYLAVIFLFHPWLGLIALAGAIILVVLALL 178 (580)
T ss_pred HHHhhHHhhc----CCCccccch-hhHHHHHHHHcCCCcchhcCCchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987666532 334433444 799999999987 444555555554 456667888888999888888888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 222 YAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWS 301 (1265)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (1265)
--+..++-.++..+...+.+...+-+..|.++|++.|+.....++|.+.+..+.....+..-..+.+..+.-.+-.....
T Consensus 179 n~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs 258 (580)
T COG4618 179 NERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQS 258 (580)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888899999999999999999999999999999999999999999888888877777777777777778
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCccc
Q 000830 302 LLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLSGH 381 (1265)
Q Consensus 302 ~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~ 381 (1265)
.++..|+|++.+|++|+|.+++..+.......|+-.....+.++..++.|.+|+.+++...|...+ .-+.+..++.
T Consensus 259 ~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m~LP~P~g~ 334 (580)
T COG4618 259 AVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE----RMPLPAPQGA 334 (580)
T ss_pred HHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----CCCCCCCCce
Confidence 888999999999999999998876655566678888899999999999999999999987654322 2344566789
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
+.++++++.=|+ .++++++|+||++++||.+|||||||||||||.++|.|.++|.+|.|++||-|+++++.+.+-++||
T Consensus 335 L~Ve~l~~~PPg-~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiG 413 (580)
T COG4618 335 LSVERLTAAPPG-QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIG 413 (580)
T ss_pred eeEeeeeecCCC-CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccC
Confidence 999999997664 4578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000830 462 LVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSI 541 (1265)
Q Consensus 462 ~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 541 (1265)
|.||+..||+|||+|||+=..++.+.+.|.+|++.+++||.|..+|+||||.|||.|..|||||||||+||||||.||.+
T Consensus 414 YLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~l 493 (580)
T COG4618 414 YLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFL 493 (580)
T ss_pred cCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcE
Confidence 99999999999999999866677889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 542 LLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 542 lllDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
++||||-|+||.+-|..+.++|...+ +|.|+|+||||++.+..+|+|++|++|++...|+-+|++++
T Consensus 494 vVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 494 VVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred EEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999999998876 59999999999999999999999999999999999888764
No 86
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=6e-70 Score=666.97 Aligned_cols=453 Identities=23% Similarity=0.288 Sum_probs=342.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 3889999999964 3489999999999999999999999999999999999999999999999888776767777889
Q ss_pred eEEccCCcc--c-------cccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 461 GLVNQEPAL--F-------ATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 461 ~~v~Q~~~l--f-------~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
+|++|++.+ + ..|++||+.++.. ..+++.++++.. |++........+||||||||++|
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG~~qrv~l 146 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK--DPARCEQLAQQF-----------GITALLDRRFKYLSTGETRKTLL 146 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh--HHHHHHHHHHHc-----------CCHhhhhCCcccCCHHHHHHHHH
Confidence 999998753 2 3589998865421 112222222222 23333455667899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCC
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNP 609 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 609 (1265)
||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+.+++...+
T Consensus 147 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 226 (490)
T PRK10938 147 CQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA 226 (490)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch
Confidence 999999999999999999999999999999998875 47899999999999876 9999999999999988766654320
Q ss_pred chHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHHHH
Q 000830 610 NSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKLYS 689 (1265)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1265)
....+... +
T Consensus 227 --~~~~~~~~--------------------------~------------------------------------------- 235 (490)
T PRK10938 227 --LVAQLAHS--------------------------E------------------------------------------- 235 (490)
T ss_pred --hhhhhhhh--------------------------h-------------------------------------------
Confidence 00000000 0
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 690 MVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERL 769 (1265)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 769 (1265)
T Consensus 236 -------------------------------------------------------------------------------- 235 (490)
T PRK10938 236 -------------------------------------------------------------------------------- 235 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 770 TLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVAT 849 (1265)
Q Consensus 770 ~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~ 849 (1265)
.+ ... ..+.
T Consensus 236 ---------------~~--~~~-~~~~----------------------------------------------------- 244 (490)
T PRK10938 236 ---------------QL--EGV-QLPE----------------------------------------------------- 244 (490)
T ss_pred ---------------cc--Ccc-ccCc-----------------------------------------------------
Confidence 00 000 0000
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000830 850 YPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGI 929 (1265)
Q Consensus 850 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1265)
T Consensus 245 -------------------------------------------------------------------------------- 244 (490)
T PRK10938 245 -------------------------------------------------------------------------------- 244 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCc
Q 000830 930 SQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIGE 1009 (1265)
Q Consensus 930 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~ 1009 (1265)
.. ++......
T Consensus 245 -------------------------------------------------------------------~~-~~~~~~~~-- 254 (490)
T PRK10938 245 -------------------------------------------------------------------PD-EPSARHAL-- 254 (490)
T ss_pred -------------------------------------------------------------------cc-cccccccc--
Confidence 00 00000000
Q ss_pred ccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-CCcEEEECCcccCC-C
Q 000830 1010 ELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-TAGKVMVDGIDIKR-L 1087 (1265)
Q Consensus 1010 ~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-~~G~I~idG~di~~-~ 1087 (1265)
+.....|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+.+| ++|+|.++|.++.. .
T Consensus 255 --~~~~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~ 329 (490)
T PRK10938 255 --PANEPRIVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGE 329 (490)
T ss_pred --CCCCceEEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCC
Confidence 001125999999999963 3589999999999999999999999999999999998875 69999999987632 2
Q ss_pred CHHHHhcccEEEecCCCCCc---ccHHHHhccCCC-------CCCH---HHHHHHHHHhchHHHHHhCCCCccccccCCC
Q 000830 1088 NLKSLRKHIALVQQEPALFA---TSIYENILYGKD-------GASE---GEVIEAAKLANAHSFISALPEGYSTKVGERG 1154 (1265)
Q Consensus 1088 ~l~~lR~~i~~VpQdp~LF~---gTIreNl~~g~~-------~~sd---~ei~~al~~a~l~~~i~~lp~Gldt~vge~G 1154 (1265)
+...+|++++|+||++.++. .|+++++.++.. .... +++.++++..++.+. ......
T Consensus 330 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~ 399 (490)
T PRK10938 330 TIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKR----------TADAPF 399 (490)
T ss_pred CHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchh----------hccCch
Confidence 33457889999999987642 467777653211 1111 233444444443220 223344
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-C-ceEEEEecCchhhhc--cCEEEEEeCC
Q 000830 1155 VQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR-K-RTTIIVAHRLSTIKN--ADQISVIESG 1230 (1265)
Q Consensus 1155 ~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~-~TvI~IaHRl~ti~~--~DrI~vl~~G 1230 (1265)
..||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ + .|+|+|||+++.+.. ||++++|++|
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G 479 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDG 479 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCC
Confidence 57999999999999999999999999999999999999999999999754 4 469999999999974 7999999999
Q ss_pred EEEEec
Q 000830 1231 KIIEQG 1236 (1265)
Q Consensus 1231 ~Ive~G 1236 (1265)
+|++.-
T Consensus 480 ~i~~~~ 485 (490)
T PRK10938 480 DIYRYV 485 (490)
T ss_pred ceEEee
Confidence 998754
No 87
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.1e-68 Score=711.44 Aligned_cols=213 Identities=25% Similarity=0.413 Sum_probs=181.5
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC---CCCcEEEECCcccCCCCHHHH
Q 000830 1017 TIELRGVHFSYPSRP-EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD---PTAGKVMVDGIDIKRLNLKSL 1092 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~~~l~~l 1092 (1265)
.++++||+++|+.++ ++++|+|||++|+|||++||+||||||||||+++|.|+.+ |++|+|.+||+++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 378999999996322 3569999999999999999999999999999999999997 78899999999985 257
Q ss_pred hcccEEEecCCC-CCcccHHHHhccCC----C-CCCHHH----HHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1093 RKHIALVQQEPA-LFATSIYENILYGK----D-GASEGE----VIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1093 R~~i~~VpQdp~-LF~gTIreNl~~g~----~-~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
|++++||||++. ++..|+||||.++. + +.++++ +.++++..++ .+..|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L-------~~~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEM-------ESYADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCC-------hhhCCCeeCCCCCCCCHHHh
Confidence 899999999876 45679999998642 1 233333 3444444444 34578999998889999999
Q ss_pred HHHHHHHHhccCCC-EEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhh--hccCEEEEEeCC-EEEEecC
Q 000830 1163 QRVAIARAVLKNPE-ILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTI--KNADQISVIESG-KIIEQGT 1237 (1265)
Q Consensus 1163 QrlaLARALlr~p~-ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti--~~~DrI~vl~~G-~Ive~Gt 1237 (1265)
||++|||||+.+|+ ||+||||||+||+.+...|++.|++.. +|+|||+++|+++.. ..||+|++|++| ++++.|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 999999999999999999999999974 579999999999974 569999999997 9999999
Q ss_pred hhh
Q 000830 1238 HSS 1240 (1265)
Q Consensus 1238 ~~e 1240 (1265)
+.+
T Consensus 988 ~~~ 990 (1394)
T TIGR00956 988 LGE 990 (1394)
T ss_pred ccc
Confidence 754
No 88
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-68 Score=660.37 Aligned_cols=478 Identities=21% Similarity=0.357 Sum_probs=340.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. .+|+
T Consensus 2 l~i~~ls~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~ 67 (530)
T PRK15064 2 LSTANITMQFGA---KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLG 67 (530)
T ss_pred EEEEEEEEEeCC---cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEE
Confidence 789999999963 35999999999999999999999999999999999999999999999873 3699
Q ss_pred EEccCCccccc-cHHHHhccCCCCC----------------CHH---HHHHH----------HHHhcHHHHHhcCccccc
Q 000830 462 LVNQEPALFAT-TIRENILYGKDDA----------------TME---EITRA----------AKLSEAMSFISNLPERFE 511 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~~~----------------~~~---~~~~~----------~~~~~~~~~i~~l~~g~~ 511 (1265)
|++|++.+|.. |++||+.++.... ..+ .+.+. .....+.+.+..+ |++
T Consensus 68 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~ 145 (530)
T PRK15064 68 KLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIP 145 (530)
T ss_pred EEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCC
Confidence 99999988875 9999998753100 000 00000 0011222333333 332
Q ss_pred ccc-cCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEE
Q 000830 512 TQV-GERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIA 589 (1265)
Q Consensus 512 t~~-~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~ 589 (1265)
... .....+||||||||++|||||+.+|++|||||||++||+++...+.+.|.+ .+.|+|+|||+++.+.. ||+|+
T Consensus 146 ~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~ 223 (530)
T PRK15064 146 EEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMA 223 (530)
T ss_pred hhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEE
Confidence 222 235678999999999999999999999999999999999999999999875 48999999999999876 99999
Q ss_pred EEeCCEE-EEeeCcchhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhccc
Q 000830 590 VVQGRKI-VKTGSHEELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSH 668 (1265)
Q Consensus 590 ~l~~G~i-~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (1265)
+|++|++ ++.|+++++++.....+....+....
T Consensus 224 ~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------- 257 (530)
T PRK15064 224 DLDYGELRVYPGNYDEYMTAATQARERLLADNAK---------------------------------------------- 257 (530)
T ss_pred EEeCCEEEEecCCHHHHHHHHHHHHHHHHHHHHH----------------------------------------------
Confidence 9999999 47888877653200000000000000
Q ss_pred CCCCCCCccchhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHH
Q 000830 669 GAADATEPATAKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAA 748 (1265)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1265)
.......
T Consensus 258 -----------~~~~~~~-------------------------------------------------------------- 264 (530)
T PRK15064 258 -----------KKAQIAE-------------------------------------------------------------- 264 (530)
T ss_pred -----------HHHHHHH--------------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000830 749 VITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLV 828 (1265)
Q Consensus 749 ~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~ 828 (1265)
++. ... +. . ... .
T Consensus 265 ------------------------~~~-~~~---~~-----~---~~~--------~----------------------- 277 (530)
T PRK15064 265 ------------------------LQS-FVS---RF-----S---ANA--------S----------------------- 277 (530)
T ss_pred ------------------------HHH-HHH---Hh-----h---ccc--------h-----------------------
Confidence 000 000 00 0 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHH
Q 000830 829 TASFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRE 908 (1265)
Q Consensus 829 ~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~ 908 (1265)
+
T Consensus 278 -----------------------------------------~-------------------------------------- 278 (530)
T PRK15064 278 -----------------------------------------K-------------------------------------- 278 (530)
T ss_pred -----------------------------------------h--------------------------------------
Confidence 0
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 909 LVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQ 988 (1265)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1265)
..... .
T Consensus 279 ---~~~~~-----------------------------------------------------------------------~ 284 (530)
T PRK15064 279 ---AKQAT-----------------------------------------------------------------------S 284 (530)
T ss_pred ---hHHHH-----------------------------------------------------------------------H
Confidence 00000 0
Q ss_pred HHHHHHHH--hcccccccCCC----CcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHH
Q 000830 989 MAASVFEV--LDRKTQVIGDI----GEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTV 1062 (1265)
Q Consensus 989 ~~~ri~~~--~~~~~~~~~~~----~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL 1062 (1265)
..+++.+. ...++...... +......+..|+++||+++|++ .++|+|+||+|++||++||+||||||||||
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTL 361 (530)
T PRK15064 285 RAKQIDKIKLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDN---GPLFKNLNLLLEAGERLAIIGENGVGKTTL 361 (530)
T ss_pred HHHHHhhccccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeCC---ceeecCcEEEECCCCEEEEECCCCCCHHHH
Confidence 00000000 00000000000 0000011236999999999963 358999999999999999999999999999
Q ss_pred HHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCC--CCc-ccHHHHhccCC-CCCCHHHHHHHHHHhchH-H
Q 000830 1063 LSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPA--LFA-TSIYENILYGK-DGASEGEVIEAAKLANAH-S 1137 (1265)
Q Consensus 1063 ~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~--LF~-gTIreNl~~g~-~~~sd~ei~~al~~a~l~-~ 1137 (1265)
+++|+|+++|++|+|.++|. ++++|+||++. ++. .|+++|+.... ....++++.++++..++. +
T Consensus 362 l~~i~G~~~p~~G~i~~~~~-----------~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 430 (530)
T PRK15064 362 LRTLVGELEPDSGTVKWSEN-----------ANIGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQD 430 (530)
T ss_pred HHHHhCCCCCCCeEEEECCc-----------eEEEEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChh
Confidence 99999999999999999982 57999999984 443 59999986422 222344566666666552 2
Q ss_pred HHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchh
Q 000830 1138 FISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLST 1217 (1265)
Q Consensus 1138 ~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~t 1217 (1265)
. ......+||||||||++||||++.+|+||||||||++||+.+...+.+.|++. ++|||+|||+++.
T Consensus 431 ~-----------~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~ 497 (530)
T PRK15064 431 D-----------IKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREF 497 (530)
T ss_pred H-----------hcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHH
Confidence 2 22334579999999999999999999999999999999999999999999886 4699999999999
Q ss_pred hhc-cCEEEEEeCCEEE-EecChhhhhh
Q 000830 1218 IKN-ADQISVIESGKII-EQGTHSSLVE 1243 (1265)
Q Consensus 1218 i~~-~DrI~vl~~G~Iv-e~Gt~~eLl~ 1243 (1265)
+.. ||+|++|++|+++ ..|+++++++
T Consensus 498 ~~~~~d~i~~l~~g~i~~~~g~~~~~~~ 525 (530)
T PRK15064 498 VSSLATRIIEITPDGVVDFSGTYEEYLR 525 (530)
T ss_pred HHHhCCEEEEEECCeEEEcCCCHHHHHH
Confidence 886 9999999999998 7899999876
No 89
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.6e-66 Score=642.27 Aligned_cols=523 Identities=17% Similarity=0.194 Sum_probs=393.0
Q ss_pred HhhchhhHHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 48 AFADFYDYILMSLGSIGACVHGVSVPV-FFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILFSSWIEVSCWM 126 (1265)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1265)
++.+++++. ++++++++++..++... .+++.+.++|.... . ...+. .++++.++..++.++..++..
T Consensus 6 ~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~------~-~~~~~----~~~~~~~~~~~~~~~~~~~~~ 73 (547)
T PRK10522 6 LVWRQYRWP-FISVMALSLASAALGIGLIAFINQRLIETADT------S-LLVLP----EFLGLLLLLMAVTLGSQLALT 73 (547)
T ss_pred HHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc------c-chHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 344444433 34455555555555444 34556777775421 0 01111 111222233456677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 127 YTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFIIGFARVWQISL 206 (1265)
Q Consensus 127 ~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l 206 (1265)
+.+.++..++|.++|++++++|+++|++ +++|++++|+++|++.++.++. .++.++..++.+++.++++++++|.+++
T Consensus 74 ~~~~~~~~~lR~~l~~~ll~~~~~~~~~-~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~l 151 (547)
T PRK10522 74 TLGHHFVYRLRSEFIKRILDTHVERIEQ-LGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLL 151 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhc-cCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 8999999999999999999999999997 5899999999999999998765 4677888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHHH
Q 000830 207 VTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGE---DKAVKVYKEALSNTYKYGRKAGL 283 (1265)
Q Consensus 207 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e---~~~~~~~~~~~~~~~~~~~~~~~ 283 (1265)
++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++++ ++.+ +.+.++|++..++..+...+...
T Consensus 152 i~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (547)
T PRK10522 152 VTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADT 230 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHH
Confidence 9999999988888888899898889999999999999999999999996 4443 45678888877777666655554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 000830 284 AKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDT 363 (1265)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~ 363 (1265)
.......+..++..+...+.+++++.. +..+.+....+.++......|+..+...+..++.++.+.+|+.++++.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~ 307 (547)
T PRK10522 231 FHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPY 307 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 444333322222222222222333221 11122222222222333446888888899999999999999999875433
Q ss_pred ccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEE
Q 000830 364 MSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILL 443 (1265)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 443 (1265)
+.+.. ..... +..+.|+++||+|+|+++ .++|+|+||++++||++|||||||||||||+++|+|+|+|++|+|.+
T Consensus 308 ~~~~~--~~~~~-~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~ 382 (547)
T PRK10522 308 KAEFP--RPQAF-PDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILL 382 (547)
T ss_pred ccccc--ccccc-CcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEE
Confidence 21111 11111 113579999999999742 46899999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCCh
Q 000830 444 DGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSG 523 (1265)
Q Consensus 444 ~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 523 (1265)
||+|+++++.+++|++|+||+|||++|++|++|| + +..+++++.++++..+..+++. .++|. .+|.+|||
T Consensus 383 ~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~-----~~G~~LSg 452 (547)
T PRK10522 383 DGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLE-LEDGR-----ISNLKLSK 452 (547)
T ss_pred CCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhh-ccccC-----CCCCCCCH
Confidence 9999999999999999999999999999999999 2 3455666666665554443332 12221 14889999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhccCEEEEEeCCEEEEe-e
Q 000830 524 GQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRNADVIAVVQGRKIVKT-G 600 (1265)
Q Consensus 524 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~-g 600 (1265)
|||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||+++++.||+|++|++|+++|. |
T Consensus 453 Gq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~ 532 (547)
T PRK10522 453 GQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTG 532 (547)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999999999999987653 48999999999999999999999999999986 4
Q ss_pred Ccc
Q 000830 601 SHE 603 (1265)
Q Consensus 601 ~~~ 603 (1265)
++.
T Consensus 533 ~~~ 535 (547)
T PRK10522 533 EER 535 (547)
T ss_pred Cch
Confidence 443
No 90
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1e-66 Score=644.99 Aligned_cols=482 Identities=23% Similarity=0.337 Sum_probs=335.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++++|++ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .+|
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~-----------~~i 72 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPG-----------IKV 72 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEE
Confidence 5899999999962 245999999999999999999999999999999999999999999999752 369
Q ss_pred eEEccCCccccc-cHHHHhccCCCC----------------CC----------HHHHHHHHHH-------hcHHHHHhcC
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDD----------------AT----------MEEITRAAKL-------SEAMSFISNL 506 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~----------------~~----------~~~~~~~~~~-------~~~~~~i~~l 506 (1265)
|||+|+|.+++. |+.||+.++... .. ..++.+.+.. ..+.+.+..+
T Consensus 73 ~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (556)
T PRK11819 73 GYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL 152 (556)
T ss_pred EEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC
Confidence 999999999876 999999875310 00 0011111111 0111222222
Q ss_pred cccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-c
Q 000830 507 PERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-A 585 (1265)
Q Consensus 507 ~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 585 (1265)
|++ .......+||||||||++|||||+.+|++||||||||+||+.+...+.+.|+++. .|+|+|||+++.+.. |
T Consensus 153 --gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 153 --RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVA 227 (556)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhc
Confidence 221 1345567899999999999999999999999999999999999999999998863 599999999999976 9
Q ss_pred CEEEEEeCCEEE-EeeCcchhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhh
Q 000830 586 DVIAVVQGRKIV-KTGSHEELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKES 664 (1265)
Q Consensus 586 d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1265)
|+|++|++|+++ ..|+++++.+............
T Consensus 228 d~i~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~--------------------------------------------- 262 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSSWLEQKAKRLAQEEKQ--------------------------------------------- 262 (556)
T ss_pred CeEEEEeCCEEEEecCCHHHHHHHHHHHHHHHHHH---------------------------------------------
Confidence 999999999986 6787766543200000000000
Q ss_pred hcccCCCCCCCccchhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHH
Q 000830 665 VLSHGAADATEPATAKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILF 744 (1265)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (1265)
..+. +.
T Consensus 263 -------------------~~~~----~~--------------------------------------------------- 268 (556)
T PRK11819 263 -------------------EAAR----QK--------------------------------------------------- 268 (556)
T ss_pred -------------------HHHH----HH---------------------------------------------------
Confidence 0000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000830 745 CCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQN 824 (1265)
Q Consensus 745 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~ 824 (1265)
.++ ++.. |.+. .+.++
T Consensus 269 ---------------------------~~~-~~~~--------~~~~--~~~~~-------------------------- 284 (556)
T PRK11819 269 ---------------------------ALK-RELE--------WVRQ--SPKAR-------------------------- 284 (556)
T ss_pred ---------------------------HHH-HHHH--------HHHH--hhhhh--------------------------
Confidence 000 0000 0000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHH
Q 000830 825 FGLVTASFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLEL 904 (1265)
Q Consensus 825 ~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~ 904 (1265)
.. ..+ ....+
T Consensus 285 ----------------------------------------~~---~~~---------------------------~~~~~ 294 (556)
T PRK11819 285 ----------------------------------------QA---KSK---------------------------ARLAR 294 (556)
T ss_pred ----------------------------------------HH---HHH---------------------------HHHHH
Confidence 00 000 00000
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 905 YSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLL 984 (1265)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1265)
T Consensus 295 -------------------------------------------------------------------------------- 294 (556)
T PRK11819 295 -------------------------------------------------------------------------------- 294 (556)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHh-cccccccCC-CCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHH
Q 000830 985 KGNQMAASVFEVL-DRKTQVIGD-IGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTV 1062 (1265)
Q Consensus 985 ~~~~~~~ri~~~~-~~~~~~~~~-~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL 1062 (1265)
.++..+.. ...++.... ........+..|+++||+++|++ .++|+|+||+|++||++||+||||||||||
T Consensus 295 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsGKSTL 366 (556)
T PRK11819 295 -----YEELLSEEYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGD---RLLIDDLSFSLPPGGIVGIIGPNGAGKSTL 366 (556)
T ss_pred -----HHHhhcccccccCCCceeecCCCCCCCCeEEEEEeEEEEECC---eeeecceeEEEcCCCEEEEECCCCCCHHHH
Confidence 00000000 000000000 00000111236999999999963 358999999999999999999999999999
Q ss_pred HHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCC-CCCc-ccHHHHhccCCCC--C--CHHHHHHHHHHhchH
Q 000830 1063 LSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEP-ALFA-TSIYENILYGKDG--A--SEGEVIEAAKLANAH 1136 (1265)
Q Consensus 1063 ~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp-~LF~-gTIreNl~~g~~~--~--sd~ei~~al~~a~l~ 1136 (1265)
+++|.|+++|++|+|.+++ ++ +++|+||++ .++. -|++||+.++... . .+.+..++++..++.
T Consensus 367 l~~i~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~ 435 (556)
T PRK11819 367 FKMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFK 435 (556)
T ss_pred HHHHhCCCCCCCeEEEECC-ce----------EEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCC
Confidence 9999999999999999954 21 599999997 5654 5999999875321 1 122233333333331
Q ss_pred HHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCch
Q 000830 1137 SFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLS 1216 (1265)
Q Consensus 1137 ~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ 1216 (1265)
+ .........||||||||++||||++.+|++|||||||++||+.+...+.+.|++. + .|+|+|||+++
T Consensus 436 ~----------~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~ 503 (556)
T PRK11819 436 G----------GDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRW 503 (556)
T ss_pred h----------hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHH
Confidence 1 0123334579999999999999999999999999999999999999999999886 3 49999999999
Q ss_pred hhhc-cCEEEEEeC-CEEEE-ecChhhhhhc
Q 000830 1217 TIKN-ADQISVIES-GKIIE-QGTHSSLVEN 1244 (1265)
Q Consensus 1217 ti~~-~DrI~vl~~-G~Ive-~Gt~~eLl~~ 1244 (1265)
.+.. ||+|++|++ |++.+ .|++++++++
T Consensus 504 ~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 504 FLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred HHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 9876 999999986 88874 7888888763
No 91
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.1e-66 Score=642.32 Aligned_cols=480 Identities=24% Similarity=0.362 Sum_probs=334.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
-|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .+|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-----------~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPG-----------IKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEE
Confidence 4899999999962 235999999999999999999999999999999999999999999999752 469
Q ss_pred eEEccCCccccc-cHHHHhccCCCC-----------------C-C--------HHHHHHHHHHhcH-------HHHHhcC
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDD-----------------A-T--------MEEITRAAKLSEA-------MSFISNL 506 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~-----------------~-~--------~~~~~~~~~~~~~-------~~~i~~l 506 (1265)
+||+|+|.+++. |++||+.++... . . ..++.++.+..+. .+.+..+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 999999999865 999999875311 0 0 0112222222221 1222222
Q ss_pred cccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-c
Q 000830 507 PERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-A 585 (1265)
Q Consensus 507 ~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 585 (1265)
|++ .......+||||||||++|||||+.+|++|||||||++||+++...+.+.|.+. +.|+|+|||+++.+.. |
T Consensus 151 --~l~-~~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCP-PWDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 221 124556789999999999999999999999999999999999999999999876 3699999999999976 9
Q ss_pred CEEEEEeCCEEE-EeeCcchhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhh
Q 000830 586 DVIAVVQGRKIV-KTGSHEELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKES 664 (1265)
Q Consensus 586 d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1265)
|+|++|++|+++ ..|+++++.+... ... ..+...
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~~~~---~~~-~~~~~~----------------------------------------- 260 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLEQKE---KRL-EQEEKE----------------------------------------- 260 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHHHHH---HHH-HHHHHH-----------------------------------------
Confidence 999999999976 6787766543200 000 000000
Q ss_pred hcccCCCCCCCccchhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHH
Q 000830 665 VLSHGAADATEPATAKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILF 744 (1265)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (1265)
..+
T Consensus 261 -------------------~~~---------------------------------------------------------- 263 (552)
T TIGR03719 261 -------------------ESA---------------------------------------------------------- 263 (552)
T ss_pred -------------------HHH----------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000830 745 CCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQN 824 (1265)
Q Consensus 745 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~ 824 (1265)
....+ .+..
T Consensus 264 ----------------------------~~~~~-----------------------~~~~-------------------- 272 (552)
T TIGR03719 264 ----------------------------RQKAL-----------------------KREL-------------------- 272 (552)
T ss_pred ----------------------------HHHHH-----------------------HHHH--------------------
Confidence 00000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHH
Q 000830 825 FGLVTASFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLEL 904 (1265)
Q Consensus 825 ~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~ 904 (1265)
.| .+ +.. ...++ +. + ....+
T Consensus 273 --------------~~-----------------------~~----~~~--------~~~~~-------~~---~-~~~~~ 292 (552)
T TIGR03719 273 --------------EW-----------------------VR----SSP--------KARQA-------KS---K-ARLAR 292 (552)
T ss_pred --------------HH-----------------------HH----hhh--------hhHHH-------HH---H-HHHHH
Confidence 00 00 000 00000 00 0 00000
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 905 YSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLL 984 (1265)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1265)
T Consensus 293 -------------------------------------------------------------------------------- 292 (552)
T TIGR03719 293 -------------------------------------------------------------------------------- 292 (552)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHH-hcccccccCC-CCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHH
Q 000830 985 KGNQMAASVFEV-LDRKTQVIGD-IGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTV 1062 (1265)
Q Consensus 985 ~~~~~~~ri~~~-~~~~~~~~~~-~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL 1062 (1265)
.++..+. ....++.... ........+..|+++|++++|++ .++|+|+||+|++||++||+||||||||||
T Consensus 293 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsGKSTL 364 (552)
T TIGR03719 293 -----YEELLSQEFQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGD---KLLIDDLSFKLPPGGIVGVIGPNGAGKSTL 364 (552)
T ss_pred -----HHhhhhhcccccCCCceeecCCCCCCCCeEEEEeeEEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHH
Confidence 0000000 0000000000 00000111235999999999963 358999999999999999999999999999
Q ss_pred HHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCC-CCc-ccHHHHhccCCCC--CC--HHHHHHHHHHhchH
Q 000830 1063 LSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPA-LFA-TSIYENILYGKDG--AS--EGEVIEAAKLANAH 1136 (1265)
Q Consensus 1063 ~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~-LF~-gTIreNl~~g~~~--~s--d~ei~~al~~a~l~ 1136 (1265)
+++|.|+.+|++|+|.+++ ++ +|+|+||++. ++. .|++||+.++... .. +.+..++++..+
T Consensus 365 l~~l~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~-- 431 (552)
T TIGR03719 365 FRMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFN-- 431 (552)
T ss_pred HHHHcCCCCCCCeEEEECC-ce----------EEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCC--
Confidence 9999999999999999954 22 6999999973 554 5999999875321 11 222223333333
Q ss_pred HHHHhCCCCccc-cccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCc
Q 000830 1137 SFISALPEGYST-KVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRL 1215 (1265)
Q Consensus 1137 ~~i~~lp~Gldt-~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl 1215 (1265)
++. ........||||||||++|||||+.+|++|||||||++||+.+...+.+.|++. ++|+|+|||++
T Consensus 432 ---------l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~~viivsHd~ 500 (552)
T TIGR03719 432 ---------FKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF--AGCAVVISHDR 500 (552)
T ss_pred ---------CChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCH
Confidence 321 123344579999999999999999999999999999999999999999999987 35999999999
Q ss_pred hhhhc-cCEEEEEeC-CEEEE-ecChhhhhh
Q 000830 1216 STIKN-ADQISVIES-GKIIE-QGTHSSLVE 1243 (1265)
Q Consensus 1216 ~ti~~-~DrI~vl~~-G~Ive-~Gt~~eLl~ 1243 (1265)
+.+.. ||+|++|++ |++++ .|+++++.+
T Consensus 501 ~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 501 WFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred HHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 99886 999999987 68874 578877665
No 92
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.1e-64 Score=627.82 Aligned_cols=471 Identities=20% Similarity=0.231 Sum_probs=371.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 751 TVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTA 830 (1265)
Q Consensus 751 ~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~ 830 (1265)
..++.++..++..+.+.++..++|.++|+++++.|++||++ +++|++++|+++|++.+...+. .+..++..++.+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~--~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~ 137 (547)
T PRK10522 61 LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQ--LGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLG 137 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc--cCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 34566778888889999999999999999999999999996 8899999999999999998765 46777888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccH---HHHHHHHHH
Q 000830 831 SFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSE---DKVLELYSR 907 (1265)
Q Consensus 831 ~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e---~~~~~~~~~ 907 (1265)
++++++.++|.+++++++.+|+.++..+...+..++...+.++...+..+.+.|.++|+++++ ++.+ +.+.+++.+
T Consensus 138 ~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~ 216 (547)
T PRK10522 138 SAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEP 216 (547)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhH
Confidence 899999999999999999888887776666666666666777788888899999999999995 4443 456677777
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 908 ELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGN 987 (1265)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1265)
..++..+...+..........+...+.....++.++++... +..+.+..............++..+....+.+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~ 293 (547)
T PRK10522 217 DAQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQ 293 (547)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666655544444333333332222222223233333322 111222222222222234467888888889999999
Q ss_pred HHHHHHHHHhcccccccCCCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHh
Q 000830 988 QMAASVFEVLDRKTQVIGDIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLIL 1067 (1265)
Q Consensus 988 ~~~~ri~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~ 1067 (1265)
.+.+|+.++.+.+++.+... ....+..+.|+|+||+|+|+++ .++|+|+||+|+|||++|||||||||||||+++|+
T Consensus 294 ~a~~ri~~l~~~~~~~~~~~-~~~~~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~ 370 (547)
T PRK10522 294 VAFNKLNKLALAPYKAEFPR-PQAFPDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLT 370 (547)
T ss_pred HHHHHHHHHhcccccccccc-ccccCcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 99999999875443221111 1111123579999999999743 46899999999999999999999999999999999
Q ss_pred ccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCcc
Q 000830 1068 RFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYS 1147 (1265)
Q Consensus 1068 rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gld 1147 (1265)
|+|+|++|+|++||+|+++++.+++|++++||||||.+|++|+++| + ++.++++++++++.+++.+++.. |+|.
T Consensus 371 g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~~-~~~~- 444 (547)
T PRK10522 371 GLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLEL-EDGR- 444 (547)
T ss_pred CCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhhc-cccC-
Confidence 9999999999999999999999999999999999999999999999 2 45678888888888877766542 4442
Q ss_pred ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhccCEEE
Q 000830 1148 TKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKNADQIS 1225 (1265)
Q Consensus 1148 t~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~~DrI~ 1225 (1265)
.+|.+||||||||++||||++++|+|||||||||+||+++|+.+.+.+.+.. +++|+|+||||+++++.||+|+
T Consensus 445 ----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~ 520 (547)
T PRK10522 445 ----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLL 520 (547)
T ss_pred ----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEE
Confidence 1478999999999999999999999999999999999999999999998665 4899999999999999999999
Q ss_pred EEeCCEEEEe-cChhhh
Q 000830 1226 VIESGKIIEQ-GTHSSL 1241 (1265)
Q Consensus 1226 vl~~G~Ive~-Gt~~eL 1241 (1265)
+|++|+++|. |++.+-
T Consensus 521 ~l~~G~i~e~~~~~~~~ 537 (547)
T PRK10522 521 EMRNGQLSELTGEERDA 537 (547)
T ss_pred EEECCEEEEecCCchhh
Confidence 9999999997 555443
No 93
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1e-63 Score=626.23 Aligned_cols=532 Identities=15% Similarity=0.100 Sum_probs=433.5
Q ss_pred HhHHHHHHhhchhhH----HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccCCcchhhhHHHHHHHHHHHHHHHHHH
Q 000830 41 VSLFKLFAFADFYDY----ILMSLGSIGACVHGVSVPVFFIFFGKLINIIGLAYLFPKTASHKVAKYSLDFVYLSVAILF 116 (1265)
Q Consensus 41 ~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1265)
..+++++++.+|+++ ..+++.+++.++.+.+....|.+.+.++|.+.... ...+...+..+.++++++.++..+
T Consensus 77 ~~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~--~~~f~~~l~~~~l~~~~~~~~~~~ 154 (659)
T TIGR00954 77 GKLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRS--PRNFAWILFKWFLIAPPASFINSA 154 (659)
T ss_pred HHHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677888877654 24566667777777888888889999999875321 111111122233333444445556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 117 SSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFLGGFII 196 (1265)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~ 196 (1265)
..++..++......++..++|.+++++....+..+||+ ++|++.+|+++|++.+.+.+...+..++..++.+++.++.
T Consensus 155 ~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~--~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~ 232 (659)
T TIGR00954 155 IKYLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS--RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFK 232 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC--CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777777777888888888888998888888999985 5799999999999999999999999999999999988887
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHH
Q 000830 197 GFA-RVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTY 275 (1265)
Q Consensus 197 ~~~-~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~ 275 (1265)
++. ++|.+++++++.+|+.+++..++.++..+..++.++..++..+..+|.++|+++||+|+.|+.+.+++++..++..
T Consensus 233 L~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~ 312 (659)
T TIGR00954 233 LLTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLV 312 (659)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 876 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-h----cccchhHHHHH-HHH---HHHHHHHHHhhHHHHHH
Q 000830 276 KYGRKAGLAKGLGLGSMHCVLFL--SWSLLVWYVSVVVH-K----HISNGGESFTT-MLN---VVIAGLSLGQAAPDITA 344 (1265)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~-~----~~~~~g~~~~~-~~~---~~~~~~~l~~~~~~~~~ 344 (1265)
+...+..++.+...++..++... ..++.++.|...+. . |.++.|.+++. +.+ +.....|+..+...+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~ 392 (659)
T TIGR00954 313 EHLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRD 392 (659)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888777776543 22222333342332 2 67888876653 222 33445688888999999
Q ss_pred HHHHHHHHHHHHHHhccccccccc-------cc--cC-------------CCCCCCcccEEEEeEEEECCCCCCCccccc
Q 000830 345 FIRAKAAAYPIFEMIERDTMSKAS-------SK--TG-------------RKLDKLSGHIEFKDVSFCYPSRPDVAIFDK 402 (1265)
Q Consensus 345 ~~~~~~a~~ri~~~l~~~~~~~~~-------~~--~~-------------~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~ 402 (1265)
++++.++.+|++++++.+++.+.. .. .. .......+.|+++||+|+|+++ .++|+|
T Consensus 393 i~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~ 470 (659)
T TIGR00954 393 MTRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIES 470 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--Ceeeec
Confidence 999999999999999764332100 00 00 0011123569999999999742 369999
Q ss_pred eeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCC
Q 000830 403 FCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGK 482 (1265)
Q Consensus 403 i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~ 482 (1265)
+||++++||+++|+||||||||||+++|+|+++|++|+|.+++ |++++||||+|++|++|++|||.++.
T Consensus 471 isl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~ 539 (659)
T TIGR00954 471 LSFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPD 539 (659)
T ss_pred ceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCC
Confidence 9999999999999999999999999999999999999999874 56799999999999999999999874
Q ss_pred -------CCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHH
Q 000830 483 -------DDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAES 555 (1265)
Q Consensus 483 -------~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~ 555 (1265)
+..+++++.++++.+++.+++.. |.|+||..+ .+.+||||||||++||||++++|+++|||||||+||+++
T Consensus 540 ~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~ 617 (659)
T TIGR00954 540 SSEDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDV 617 (659)
T ss_pred ChhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHH
Confidence 33567888999999999998877 999999876 577999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeC
Q 000830 556 ENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQG 593 (1265)
Q Consensus 556 ~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~ 593 (1265)
++.+.+.+++. |+|+|+||||+++++.||+|++|+.
T Consensus 618 ~~~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 618 EGYMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999999774 8999999999999999999999973
No 94
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-65 Score=635.38 Aligned_cols=201 Identities=23% Similarity=0.383 Sum_probs=165.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .++
T Consensus 312 ~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 5999999999963 45899999999999999999999999999999999999999999999741 269
Q ss_pred EEEecCC--CCCc-ccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000830 1097 ALVQQEP--ALFA-TSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLK 1173 (1265)
Q Consensus 1097 ~~VpQdp--~LF~-gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr 1173 (1265)
+|+||++ .++. .|+.+++....+...++++.+.++..++.+ ..+......||||||||++||||++.
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~----------~~~~~~~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQG----------DKVTEETRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCCh----------hHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 9999985 3443 478888742122223344555555444321 11222335799999999999999999
Q ss_pred CCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEE-EecChhhhhh
Q 000830 1174 NPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKII-EQGTHSSLVE 1243 (1265)
Q Consensus 1174 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Iv-e~Gt~~eLl~ 1243 (1265)
+|++|||||||++||+.+...+.+.|++. +.|||+|||+++.+.. ||+|++|++|+++ ..|++++..+
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 99999999999999999999999999986 4599999999999976 9999999999998 6799988743
No 95
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.7e-64 Score=667.78 Aligned_cols=214 Identities=23% Similarity=0.387 Sum_probs=177.6
Q ss_pred ccEEEEeEEEECCCC----------CCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC--CCcEEEECCcc
Q 000830 1016 GTIELRGVHFSYPSR----------PEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP--TAGKVMVDGID 1083 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~----------~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~idG~d 1083 (1265)
..+.|+||++.++.. ....+|+|+|++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.+
T Consensus 866 ~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~ 945 (1470)
T PLN03140 866 LAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFP 945 (1470)
T ss_pred ceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCcc
Confidence 369999999997532 123689999999999999999999999999999999999763 68999999988
Q ss_pred cCCCCHHHHhcccEEEecCCCCCc-ccHHHHhccCC----C-CCCHHH----HHHHHHHhchHHHHHhCCCCccccccCC
Q 000830 1084 IKRLNLKSLRKHIALVQQEPALFA-TSIYENILYGK----D-GASEGE----VIEAAKLANAHSFISALPEGYSTKVGER 1153 (1265)
Q Consensus 1084 i~~~~l~~lR~~i~~VpQdp~LF~-gTIreNl~~g~----~-~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~ 1153 (1265)
..+ ..+|+.++||+|++.++. .|++|||.++. + ..++++ +.+.++..++.+ -.|+.+|..
T Consensus 946 ~~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~-------~~~~~vg~~ 1015 (1470)
T PLN03140 946 KKQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDN-------LKDAIVGLP 1015 (1470)
T ss_pred CCh---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChh-------HhCCccCCC
Confidence 643 456788999999998775 59999997642 1 223332 445555555543 347777754
Q ss_pred C-CCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchh-h-hccCEEEEEeC
Q 000830 1154 G-VQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLST-I-KNADQISVIES 1229 (1265)
Q Consensus 1154 G-~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~t-i-~~~DrI~vl~~ 1229 (1265)
+ ..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +|+|||+++|+++. + ..||++++|++
T Consensus 1016 ~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~ 1095 (1470)
T PLN03140 1016 GVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1095 (1470)
T ss_pred CCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcC
Confidence 4 5799999999999999999999999999999999999999999999975 47899999999984 4 56999999996
Q ss_pred -CEEEEecChh
Q 000830 1230 -GKIIEQGTHS 1239 (1265)
Q Consensus 1230 -G~Ive~Gt~~ 1239 (1265)
|+++..|++.
T Consensus 1096 gG~~v~~G~~~ 1106 (1470)
T PLN03140 1096 GGQVIYSGPLG 1106 (1470)
T ss_pred CCEEEEECCcc
Confidence 8999999864
No 96
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-64 Score=580.00 Aligned_cols=455 Identities=26% Similarity=0.420 Sum_probs=357.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChH-HHhhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLK-WLRQQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~-~~r~~ 459 (1265)
-++++|++++|+ ..++|+|+||++.+||++|++|+||||||||+|+|+|.|+|++|+|.+||++....++. .....
T Consensus 8 ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 488999999997 35799999999999999999999999999999999999999999999999999877775 55667
Q ss_pred eeEEccCCccccc-cHHHHhccCCCCCC------HHHHHHHHHHhcHHHHHhcCc--ccccccccCCCCCCChHHHHHHH
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDDAT------MEEITRAAKLSEAMSFISNLP--ERFETQVGERGIQLSGGQKQRIA 530 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~~~------~~~~~~~~~~~~~~~~i~~l~--~g~~t~~~~~g~~LSgGqkqria 530 (1265)
|+.|+||..|++. ||.|||.+|++... ..++.+.++ +.+..+- ...++.+ .+||+||||-|+
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~-----~~l~~lg~~~~~~~~v----~~LsiaqrQ~Ve 155 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRAR-----ELLARLGLDIDPDTLV----GDLSIAQRQMVE 155 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHH-----HHHHHcCCCCChhhhh----hhCCHHHHHHHH
Confidence 9999999999987 99999999975432 233333222 2233331 2244444 579999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCc-chhcc
Q 000830 531 ISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSH-EELIS 607 (1265)
Q Consensus 531 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~-~~l~~ 607 (1265)
||||+..+++|+|||||||+|+....+.+.+.+++++ +|.++|+||||++++.. ||||.||.||+.+..++. .++-.
T Consensus 156 IArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~ 235 (500)
T COG1129 156 IARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSE 235 (500)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCH
Confidence 9999999999999999999999999999999999986 59999999999999977 999999999999876542 11100
Q ss_pred CCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHH
Q 000830 608 NPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKL 687 (1265)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 687 (1265)
. +++ .
T Consensus 236 ~------~lv-----------------------------------------------------------------~---- 240 (500)
T COG1129 236 D------ELV-----------------------------------------------------------------R---- 240 (500)
T ss_pred H------HHH-----------------------------------------------------------------H----
Confidence 0 000 0
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 688 YSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGE 767 (1265)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 767 (1265)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 768 RLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVV 847 (1265)
Q Consensus 768 ~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l 847 (1265)
.-.|+ +
T Consensus 241 --------------------------~MvGr-------~----------------------------------------- 246 (500)
T COG1129 241 --------------------------LMVGR-------E----------------------------------------- 246 (500)
T ss_pred --------------------------HhhCc-------c-----------------------------------------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000830 848 ATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFY 927 (1265)
Q Consensus 848 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (1265)
T Consensus 247 -------------------------------------------------------------------------------- 246 (500)
T COG1129 247 -------------------------------------------------------------------------------- 246 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Q 000830 928 GISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDI 1007 (1265)
Q Consensus 928 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~ 1007 (1265)
+.+..+. . ..
T Consensus 247 --------------------------------------------------------------------~~~~~~~-~-~~ 256 (500)
T COG1129 247 --------------------------------------------------------------------LEDLFPE-P-PE 256 (500)
T ss_pred --------------------------------------------------------------------hhhhccc-c-cc
Confidence 0000000 0 00
Q ss_pred CcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCC
Q 000830 1008 GEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRL 1087 (1265)
Q Consensus 1008 ~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~ 1087 (1265)
. .+.+..++++|++..- .++|+||++++||++||.|--|||+|-++++|+|..++.+|+|.+||.++.--
T Consensus 257 ~---~~~~~~l~v~~l~~~~-------~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~ 326 (500)
T COG1129 257 E---GIGEPVLEVRNLSGGG-------KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIR 326 (500)
T ss_pred c---CCCCcEEEEecCCCCC-------ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCC
Confidence 0 0011246788876321 47999999999999999999999999999999999989999999999988766
Q ss_pred CHH-HHhcccEEEecCCC---CC-cccHHHHhccCC-CCCCHH-HHHHHHHHhchHHHHHhCC---CCccccccCCCCCC
Q 000830 1088 NLK-SLRKHIALVQQEPA---LF-ATSIYENILYGK-DGASEG-EVIEAAKLANAHSFISALP---EGYSTKVGERGVQL 1157 (1265)
Q Consensus 1088 ~l~-~lR~~i~~VpQdp~---LF-~gTIreNl~~g~-~~~sd~-ei~~al~~a~l~~~i~~lp---~Gldt~vge~G~~L 1157 (1265)
++. ..+..|+|||-|.. || ..+|++|+.+.. ...+.. -+..+.+.....+++..|. .+.+.+++ +|
T Consensus 327 sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~----~L 402 (500)
T COG1129 327 SPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIG----TL 402 (500)
T ss_pred CHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhh----cC
Confidence 644 68899999999874 44 669999997751 111111 3445555666777888772 34455554 69
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhh-ccCEEEEEeCCEEEEe
Q 000830 1158 SGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIK-NADQISVIESGKIIEQ 1235 (1265)
Q Consensus 1158 SgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~-~~DrI~vl~~G~Ive~ 1235 (1265)
|||.+|+++|||+|..+|+||||||||.++|..+.+.|.+.|+++. +|++||+||-.+.++. .||||+||.+|+|+..
T Consensus 403 SGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e 482 (500)
T COG1129 403 SGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGE 482 (500)
T ss_pred CchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999999986 5799999999999988 5999999999999985
Q ss_pred cChhh
Q 000830 1236 GTHSS 1240 (1265)
Q Consensus 1236 Gt~~e 1240 (1265)
=+.++
T Consensus 483 ~~~~~ 487 (500)
T COG1129 483 LDREE 487 (500)
T ss_pred ecccc
Confidence 54444
No 97
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.6e-63 Score=622.54 Aligned_cols=201 Identities=29% Similarity=0.480 Sum_probs=164.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++ .++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 5899999999963 35899999999999999999999999999999999999999999999 5432 59
Q ss_pred EEEecCC-CCCc-ccHHHHhccCCCCC--C--HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1097 ALVQQEP-ALFA-TSIYENILYGKDGA--S--EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1097 ~~VpQdp-~LF~-gTIreNl~~g~~~~--s--d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
+|++|++ .++. .|+.+|+.++.+.. . +.++.+.++..++. ++..+.++ ..||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~~~----~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFH------PKRAMTPV----KALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCC------HHHHhChh----hhCCHHHHHHHHHHHH
Confidence 9999986 4665 49999998753321 1 22333333333321 11123334 4699999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEe-CCEEEE-ecChhhhhh
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIE-SGKIIE-QGTHSSLVE 1243 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~-~G~Ive-~Gt~~eLl~ 1243 (1265)
|+.+|++|||||||++||+.+...+.+.|++. ++|+|+|||+++.+.. ||+|++|+ +|++++ .|++++.++
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999876 5699999999999976 99999998 899987 478887754
No 98
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.1e-63 Score=623.32 Aligned_cols=201 Identities=29% Similarity=0.438 Sum_probs=165.3
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcc
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKH 1095 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 1095 (1265)
..|+++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+++ +.+
T Consensus 507 ~~L~~~~ls~~y~~~--~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~ 573 (718)
T PLN03073 507 PIISFSDASFGYPGG--PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVR 573 (718)
T ss_pred ceEEEEeeEEEeCCC--CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------cee
Confidence 369999999999632 3589999999999999999999999999999999999999999999975 347
Q ss_pred cEEEecCCCCCcccHHHHhcc----CCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000830 1096 IALVQQEPALFATSIYENILY----GKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAV 1171 (1265)
Q Consensus 1096 i~~VpQdp~LF~gTIreNl~~----g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARAL 1171 (1265)
|+|+||++. ...++.+|... ..+..+++++.++++..++.+.. .......||||||||++||||+
T Consensus 574 igyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~----------~~~~~~~LSgGqkqRvaLAraL 642 (718)
T PLN03073 574 MAVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNL----------ALQPMYTLSGGQKSRVAFAKIT 642 (718)
T ss_pred EEEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHH----------hcCCccccCHHHHHHHHHHHHH
Confidence 999999973 22345555321 12334566777777777664211 1223457999999999999999
Q ss_pred ccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEE-EecChhhhh
Q 000830 1172 LKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKII-EQGTHSSLV 1242 (1265)
Q Consensus 1172 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Iv-e~Gt~~eLl 1242 (1265)
+.+|++|||||||++||+.+...+.+.+++. ++|+|+|||+++.+.. ||+|++|++|+++ ..|++++..
T Consensus 643 ~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 643 FKKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 9999999999999999999999999999875 3599999999999986 9999999999998 578877653
No 99
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.7e-63 Score=607.29 Aligned_cols=193 Identities=24% Similarity=0.343 Sum_probs=162.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.++++|++++|++ . .|+++||+|++||++||+||||||||||+++|.|+.+|++|+|.++ + ++
T Consensus 340 ~l~~~~ls~~~~~---~-~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~---~----------~i 402 (590)
T PRK13409 340 LVEYPDLTKKLGD---F-SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE---L----------KI 402 (590)
T ss_pred EEEEcceEEEECC---E-EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe---e----------eE
Confidence 5899999999963 2 4999999999999999999999999999999999999999999986 1 59
Q ss_pred EEEecCCCC-CcccHHHHhccCCCCCC-HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000830 1097 ALVQQEPAL-FATSIYENILYGKDGAS-EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKN 1174 (1265)
Q Consensus 1097 ~~VpQdp~L-F~gTIreNl~~g~~~~s-d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~ 1174 (1265)
+|+||++.+ ++.|++||+.++..... +..+.++++..++.+..+ .....||||||||++|||||+++
T Consensus 403 ~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~-----------~~~~~LSGGe~QRvaiAraL~~~ 471 (590)
T PRK13409 403 SYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLD-----------KNVKDLSGGELQRVAIAACLSRD 471 (590)
T ss_pred EEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHh-----------CCcccCCHHHHHHHHHHHHHhcC
Confidence 999999875 46799999986532222 234455666666554332 33356999999999999999999
Q ss_pred CCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecCh
Q 000830 1175 PEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTH 1238 (1265)
Q Consensus 1175 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~ 1238 (1265)
|++|||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++ ++...|+.
T Consensus 472 p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~~ 537 (590)
T PRK13409 472 ADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGHA 537 (590)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeeec
Confidence 999999999999999999999999999754 7899999999999876 999999964 88877763
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=7.8e-60 Score=591.13 Aligned_cols=526 Identities=15% Similarity=0.100 Sum_probs=422.1
Q ss_pred HHHHHHhhchhhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc-chhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000830 684 AIKLYSMVRPDWT-----YGVCGTICAIIAGAQMPLFALGVSQALVAYYMDW-DTTQREVKKITILFCCAAVITVIVHAI 757 (1265)
Q Consensus 684 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~ 757 (1265)
+.+++++.+|+|+ .+.+.+++.++...+....+.+.+.+++...... .........+.++++++.++..+..++
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~ 158 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYL 158 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566788888886 4445555555555555555556666555443211 101111222334444455556666667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 758 EHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFI 837 (1265)
Q Consensus 758 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~ 837 (1265)
..++...+..++..++|++.+++....++.|||. ++|++.+|+++|++.+.+.+...+..++..++.++++++.++.
T Consensus 159 ~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 159 LKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777778888888999999999888889999984 6899999999999999999999999999999998888887775
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHH
Q 000830 838 -LNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRS 916 (1265)
Q Consensus 838 -~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~ 916 (1265)
++|.+++++++.+|+.++......+...+...+.++..........|.++|+++|++|+.++.+.+++.+..++..+..
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888888888888888888899999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHh-h----hcccHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Q 000830 917 FIRGQIAGIFYGISQFFIFSS--YGLALWYGSVLMG-K----ELASFKSVMKSFMV----LIVTALAMGETLALVPDLLK 985 (1265)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~l~~-~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 985 (1265)
.+...+......+..++.... ....++.|...+. . +.++.+.++..+.. +.....++..+.....++..
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~ 395 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTR 395 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888877777776432 2222333343332 2 56777776654333 33456678888888999999
Q ss_pred HHHHHHHHHHHhcccccccC------CCC------------------cccCCCcccEEEEeEEEECCCCCCcccccceeE
Q 000830 986 GNQMAASVFEVLDRKTQVIG------DIG------------------EELTNVEGTIELRGVHFSYPSRPEVVIFKDFNL 1041 (1265)
Q Consensus 986 ~~~~~~ri~~~~~~~~~~~~------~~~------------------~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl 1041 (1265)
...+.+|+.++++.+++... ... .......+.|+++||+|+|+++ .++|+|+||
T Consensus 396 ~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~isl 473 (659)
T TIGR00954 396 LAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--CeeeecceE
Confidence 99999999999875433110 000 0011134679999999999742 368999999
Q ss_pred EEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCC---
Q 000830 1042 KVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGK--- 1118 (1265)
Q Consensus 1042 ~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~--- 1118 (1265)
+|++||++||+||||||||||+++|.|+++|++|+|.+|+ |++++||||+|.+|++|++|||.++.
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~ 542 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSE 542 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999874 67899999999999999999999864
Q ss_pred ----CCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHH
Q 000830 1119 ----DGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERV 1194 (1265)
Q Consensus 1119 ----~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~ 1194 (1265)
++.++++++++++.++++++++. |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++.
T Consensus 543 ~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~ 620 (659)
T TIGR00954 543 DMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGY 620 (659)
T ss_pred hhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 34678899999999999999988 999999987 567999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceEEEEecCchhhhccCEEEEEeC
Q 000830 1195 VQQALQRLMRKRTTIIVAHRLSTIKNADQISVIES 1229 (1265)
Q Consensus 1195 I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~ 1229 (1265)
+++.+++. ++|+|+||||++++..||+|++|++
T Consensus 621 l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 621 MYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999874 8999999999999999999999973
No 101
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.7e-61 Score=544.52 Aligned_cols=462 Identities=26% Similarity=0.444 Sum_probs=358.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh-HHHhhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL-KWLRQQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~ 459 (1265)
.++++|+++.|| ...+++||||++++||++||+|+||+|||||+++|.|+|+|++|+|.+||++++--++ +.+|..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999998 4568999999999999999999999999999999999999999999999999987666 568889
Q ss_pred eeEEccCCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
||+|+|++.|++. ||.|||.+|.+......+..+.....+.+..+.+ |++-...+....||-||||||.|-+|||++
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 9999999999987 9999999998642110011111111111222221 333334455567999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCchHHHHH
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNSAYAAL 616 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 616 (1265)
|++||||||||-|-|...+.+.+.++++. .|+|||+|||++.++.. |||+.||.+|+++..-+ ..-+.......+|
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~--~~~~~t~~ela~l 236 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVD--PVAETTEEELAEL 236 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeec--CCCCCCHHHHHHH
Confidence 99999999999999999999999999886 59999999999999987 99999999999864322 1000000000000
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCCCCCCCccchhhhHHHHHHHhhchhhH
Q 000830 617 VQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGAADATEPATAKHVSAIKLYSMVRPDWT 696 (1265)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (1265)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 697 YGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREK 776 (1265)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~ 776 (1265)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 777 MFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTASFVIAFILNWRITLVVVATYPLIISG 856 (1265)
Q Consensus 777 l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~ 856 (1265)
| .|+
T Consensus 237 M------------------vG~---------------------------------------------------------- 240 (501)
T COG3845 237 M------------------VGR---------------------------------------------------------- 240 (501)
T ss_pred h------------------cCC----------------------------------------------------------
Confidence 0 000
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 857 HISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFS 936 (1265)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1265)
+
T Consensus 241 -------------~------------------------------------------------------------------ 241 (501)
T COG3845 241 -------------E------------------------------------------------------------------ 241 (501)
T ss_pred -------------c------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccCCCcc
Q 000830 937 SYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKTQVIGDIGEELTNVEG 1016 (1265)
Q Consensus 937 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~g 1016 (1265)
+ ..+.. ..+..|.+.
T Consensus 242 -----------------------------------------------------------v-~~~~~-----~~~~~pg~~ 256 (501)
T COG3845 242 -----------------------------------------------------------V-VLRVV-----KPPSTPGEV 256 (501)
T ss_pred -----------------------------------------------------------c-ccccc-----cCCCCCCCe
Confidence 0 00000 000011123
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCccc-CCCCHHHHh-c
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDI-KRLNLKSLR-K 1094 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di-~~~~l~~lR-~ 1094 (1265)
-++++|++..-+ + +.+.+++|||+|++||++||.|-.|.|-+.|+.+|.|+.+|.+|+|.++|.|+ ...+...+| .
T Consensus 257 vL~V~~L~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~~ 334 (501)
T COG3845 257 VLEVEDLSVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERRRL 334 (501)
T ss_pred EEEEeeeEeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHHhc
Confidence 589999998543 2 24579999999999999999999999999999999999999999999999997 666776655 5
Q ss_pred ccEEEecCCC----CCcccHHHHhccCCCC---------CCHHHHHHHHHHhchHHHHHhC---CCCccccccCCCCCCC
Q 000830 1095 HIALVQQEPA----LFATSIYENILYGKDG---------ASEGEVIEAAKLANAHSFISAL---PEGYSTKVGERGVQLS 1158 (1265)
Q Consensus 1095 ~i~~VpQdp~----LF~gTIreNl~~g~~~---------~sd~ei~~al~~a~l~~~i~~l---p~Gldt~vge~G~~LS 1158 (1265)
.++|||.|.+ ..+-|+.||+.++.-. .+..++.+. ..+.++++ +.+.++++. +||
T Consensus 335 G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~-----a~~li~~fdVr~~~~~~~a~----~LS 405 (501)
T COG3845 335 GLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKF-----ARELIEEFDVRAPSPDAPAR----SLS 405 (501)
T ss_pred CCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHH-----HHHHHHHcCccCCCCCcchh----hcC
Confidence 7999999985 5577999999765322 122334333 23444444 345555554 699
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1159 GGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1159 gGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
||+.||+-+||-|.++|++||..+||-+||..+.+.|++.|.+.. +|+.|++|+-.|+.+.. ||||.||.+|+++...
T Consensus 406 GGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~ 485 (501)
T COG3845 406 GGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIV 485 (501)
T ss_pred CcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceeccc
Confidence 999999999999999999999999999999999999999998876 57899999999999876 9999999999999888
Q ss_pred Chhh
Q 000830 1237 THSS 1240 (1265)
Q Consensus 1237 t~~e 1240 (1265)
++++
T Consensus 486 ~~~~ 489 (501)
T COG3845 486 PPEE 489 (501)
T ss_pred cccc
Confidence 8776
No 102
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.3e-60 Score=568.95 Aligned_cols=482 Identities=28% Similarity=0.400 Sum_probs=343.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++++|++ +++|+|+||++.+|+++||||+||||||||+++|+|...|++|+|...+. -++
T Consensus 3 ~i~~~~ls~~~g~---~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v 68 (530)
T COG0488 3 MITLENLSLAYGD---RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRV 68 (530)
T ss_pred eEEEeeeEEeeCC---ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceE
Confidence 4889999999963 46999999999999999999999999999999999999999999998753 269
Q ss_pred eEEccCCccccc-cHHHHhccCCCCCC--HHHHHHHHH------------H-------------hcHHHHHhcCcccccc
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDDAT--MEEITRAAK------------L-------------SEAMSFISNLPERFET 512 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~~~--~~~~~~~~~------------~-------------~~~~~~i~~l~~g~~t 512 (1265)
+|++|++.+.+. ||.|.+..+..... ..+...+.. . +.+...+..| |+..
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~ 146 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPD 146 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCc
Confidence 999999999976 99999987753211 011111100 0 1111222222 2222
Q ss_pred cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEE
Q 000830 513 QVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVV 591 (1265)
Q Consensus 513 ~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l 591 (1265)
. .....+||||||-|++|||||+.+||+|||||||++||.++..++.+.|.+. +| |+|+|||+..++.+ |++|+-+
T Consensus 147 ~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~-~g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 147 E-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY-PG-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred c-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC-CC-cEEEEeCCHHHHHHHhhheEEe
Confidence 2 3344679999999999999999999999999999999999999999999864 46 99999999999988 9999999
Q ss_pred eCCEEE-EeeCcchhccCCchHHHHHHHHHHHhhhccCCCCCCCCCCCCcccccccccCCCcccccCcccchhhhcccCC
Q 000830 592 QGRKIV-KTGSHEELISNPNSAYAALVQLQEAASQQSNSSQCPNMGRPLSIKFSRELSGTRTSFGASFRSEKESVLSHGA 670 (1265)
Q Consensus 592 ~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (1265)
+.|++. +.|+|+..++...... .+.....
T Consensus 224 d~g~l~~y~Gny~~~~~~r~~~~-----~~~~~~~--------------------------------------------- 253 (530)
T COG0488 224 DRGKLTPYKGNYSSYLEQKAERL-----RQEAAAY--------------------------------------------- 253 (530)
T ss_pred cCCceeEecCCHHHHHHHHHHHH-----HHHHHHH---------------------------------------------
Confidence 999874 4566655443210000 0000000
Q ss_pred CCCCCccchhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHH
Q 000830 671 ADATEPATAKHVSAIKLYSMVRPDWTYGVCGTICAIIAGAQMPLFALGVSQALVAYYMDWDTTQREVKKITILFCCAAVI 750 (1265)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1265)
........+...
T Consensus 254 -------~~~~~~~~~~~~------------------------------------------------------------- 265 (530)
T COG0488 254 -------EKQQKELAKEQE------------------------------------------------------------- 265 (530)
T ss_pred -------HHHHHHHHHHHH-------------------------------------------------------------
Confidence 000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 751 TVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTILIQNFGLVTA 830 (1265)
Q Consensus 751 ~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~ 830 (1265)
| +.|+...
T Consensus 266 -------------------------------------~-----------i~r~~~~------------------------ 273 (530)
T COG0488 266 -------------------------------------W-----------IRRGKAA------------------------ 273 (530)
T ss_pred -------------------------------------H-----------HHHHHhc------------------------
Confidence 0 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHH
Q 000830 831 SFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDKVLELYSRELV 910 (1265)
Q Consensus 831 ~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~ 910 (1265)
.. ..+++.+
T Consensus 274 ------------------------------------~~-~~k~a~s---------------------------------- 282 (530)
T COG0488 274 ------------------------------------AS-KAKKAKS---------------------------------- 282 (530)
T ss_pred ------------------------------------cc-hHHHHHH----------------------------------
Confidence 00 0000000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 911 EPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALVPDLLKGNQMA 990 (1265)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1265)
.....
T Consensus 283 ---------------------------------------------------------------------------r~k~l 287 (530)
T COG0488 283 ---------------------------------------------------------------------------RIKRL 287 (530)
T ss_pred ---------------------------------------------------------------------------HHHHH
Confidence 00000
Q ss_pred HHHHH--HhcccccccC----C-CCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHH
Q 000830 991 ASVFE--VLDRKTQVIG----D-IGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVL 1063 (1265)
Q Consensus 991 ~ri~~--~~~~~~~~~~----~-~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~ 1063 (1265)
+++.+ ....+..... . ........+..++++|+++.|++. .++++++||.|.+|++||||||||+|||||+
T Consensus 288 ~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~~~s~~i~~g~riaiiG~NG~GKSTLl 365 (530)
T COG0488 288 EKLEARLAEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLL 365 (530)
T ss_pred HHHHhhhhhcccccccccceeeccCCcccCCCeeEEEeccccccCCC--ceeecCceEEecCCCEEEEECCCCCCHHHHH
Confidence 01110 0001110000 0 000001123469999999999743 5689999999999999999999999999999
Q ss_pred HHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCC-CCC-cccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHh
Q 000830 1064 SLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEP-ALF-ATSIYENILYGKDGASEGEVIEAAKLANAHSFISA 1141 (1265)
Q Consensus 1064 ~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp-~LF-~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~ 1141 (1265)
++|.|-..|.+|+|.+.- .+ ++||.+|+- .++ +.|+-|++.-..++..+.++...|...++..-
T Consensus 366 k~l~g~~~~~~G~v~~g~-~v----------~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~--- 431 (530)
T COG0488 366 KLLAGELGPLSGTVKVGE-TV----------KIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE--- 431 (530)
T ss_pred HHHhhhcccCCceEEeCC-ce----------EEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH---
Confidence 999999999999998843 33 599999998 444 34899999876666567788888777665432
Q ss_pred CCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-
Q 000830 1142 LPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN- 1220 (1265)
Q Consensus 1142 lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~- 1220 (1265)
-..++|+ .||||||-|+.||+.++.+|.+|||||||.+||.+|...+.++|.+. ..|||+|||+-+.+..
T Consensus 432 ---~~~~~v~----~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~v 502 (530)
T COG0488 432 ---DQEKPVG----VLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRV 502 (530)
T ss_pred ---HHhCchh----hcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhh
Confidence 2334444 69999999999999999999999999999999999999999999886 5699999999999988
Q ss_pred cCEEEEEeCCEEEEe-cChhhhhh
Q 000830 1221 ADQISVIESGKIIEQ-GTHSSLVE 1243 (1265)
Q Consensus 1221 ~DrI~vl~~G~Ive~-Gt~~eLl~ 1243 (1265)
|++|+++++ ++.++ |++++..+
T Consensus 503 a~~i~~~~~-~~~~~~g~y~~y~~ 525 (530)
T COG0488 503 ATRIWLVED-KVEEFEGGYEDYLE 525 (530)
T ss_pred cceEEEEcC-ceeEcCCCHHHHHH
Confidence 999999999 88877 88888776
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.7e-53 Score=476.37 Aligned_cols=238 Identities=26% Similarity=0.450 Sum_probs=224.4
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcc
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKH 1095 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 1095 (1265)
|.|+|+||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++ ++|+|++||+|+..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 579999999999743 3468999999999999999999999999999999999998 78999999999999999999999
Q ss_pred cEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000830 1096 IALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNP 1175 (1265)
Q Consensus 1096 i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p 1175 (1265)
|+||||+|.+|++|+++|+++.. ..++++++++++.+++.+++.++|++||+.++++|.+||||||||+|||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999997532 35788999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHHH
Q 000830 1176 EILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENEDGAYFKLINL 1255 (1265)
Q Consensus 1176 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~~ 1255 (1265)
+||||||||++||+.+++.+++.|++.++++|+|+||||++++..||||++|++|++++.|+|++|++ ..+.|+++++.
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~-~~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLN-EKSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhh-CcHHHHHHHhh
Confidence 99999999999999999999999999888999999999999999999999999999999999999998 57899999876
Q ss_pred hh
Q 000830 1256 QQ 1257 (1265)
Q Consensus 1256 ~~ 1257 (1265)
..
T Consensus 237 ~~ 238 (275)
T cd03289 237 SD 238 (275)
T ss_pred cc
Confidence 54
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-52 Score=421.13 Aligned_cols=220 Identities=33% Similarity=0.547 Sum_probs=188.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCC-CCChHHHhhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIK-GLDLKWLRQQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~-~~~~~~~r~~ 459 (1265)
.|+++|++++|++ ..||+|||++|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 4899999999973 45999999999999999999999999999999999999999999999998774 3378899999
Q ss_pred eeEEccCCccccc-cHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHh
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAI 535 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal 535 (1265)
+|+|+|+..||+. |+.||+.++.- ..+.++..+ . +.+.+... |+.......+.+|||||||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~---~--A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARAL 151 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEARE---K--ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 151 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHH---H--HHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHH
Confidence 9999999999987 99999998742 112222221 1 11223322 344445566789999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCc
Q 000830 536 VKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPN 610 (1265)
Q Consensus 536 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 610 (1265)
+.+|+++|+|||||||||+....+.+.++++. .|.|.|+|||.+.+.+. ||||+.|++|+|+++|+++++..++.
T Consensus 152 aM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 152 AMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred cCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 99999999999999999999999999999986 58999999999999988 99999999999999999999988754
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-50 Score=404.82 Aligned_cols=218 Identities=34% Similarity=0.549 Sum_probs=194.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccC-CCCHHHHhcc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIK-RLNLKSLRKH 1095 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~-~~~l~~lR~~ 1095 (1265)
.|+++||+.+|. +..||+|||++|++||.++|+||||||||||+++|.|+-+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 489999999996 346999999999999999999999999999999999999999999999998774 3378899999
Q ss_pred cEEEecCCCCCc-ccHHHHhccCC---CCCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1096 IALVQQEPALFA-TSIYENILYGK---DGASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1096 i~~VpQdp~LF~-gTIreNl~~g~---~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
+|+|+|+..||. -|+-||+.++. ...+. +.-.+.++++|+.|..+..| .+||||||||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 999999999996 59999998862 12232 33455677888888877776 4799999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcC
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR-KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENE 1245 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~ 1245 (1265)
||||.-+|+++++|||||||||+.-..+.+.++++.+ |.|+|+|||.+...++ ||||+.||+|+|+|+|+|+++..++
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 9999999999999999999999999999999999875 6799999999999998 9999999999999999999999876
Q ss_pred CcH
Q 000830 1246 DGA 1248 (1265)
Q Consensus 1246 ~g~ 1248 (1265)
+..
T Consensus 228 ~~~ 230 (240)
T COG1126 228 KSE 230 (240)
T ss_pred CCH
Confidence 543
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-50 Score=426.64 Aligned_cols=223 Identities=37% Similarity=0.613 Sum_probs=192.2
Q ss_pred EEEEeEEEECCCC--CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh---HHH
Q 000830 382 IEFKDVSFCYPSR--PDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL---KWL 456 (1265)
Q Consensus 382 i~~~~v~f~y~~~--~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~ 456 (1265)
|++++|++.|+.. +...+|+||||+|++||+.||||+||+|||||++++.++-.|++|+|.+||+|+..++. ..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999852 23568999999999999999999999999999999999999999999999999887765 456
Q ss_pred hhheeEEccCCcccc-ccHHHHhccCCCCC--CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 457 RQQIGLVNQEPALFA-TTIRENILYGKDDA--TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 457 r~~i~~v~Q~~~lf~-~ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
|++|||++|++.|++ .||.+|++|+..-+ +.+++ ..+..++.+++ |+....+..+.+|||||||||+|||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei--~~RV~elLelV-----gL~dk~~~yP~qLSGGQKQRVaIAR 154 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEI--KQRVAELLELV-----GLSDKADRYPAQLSGGQKQRVAIAR 154 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHH--HHHHHHHHHHc-----CChhhhccCchhcCcchhhHHHHHH
Confidence 789999999999998 59999999986533 22332 22334444433 2333456778899999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCc
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPN 610 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 610 (1265)
||+.+|+|||.|||||||||+|.+.|.+.|+++.+ |.|+++|||.++.++. |||+.||++|+++|+|+-.++..+|.
T Consensus 155 ALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~Pk 234 (339)
T COG1135 155 ALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANPK 234 (339)
T ss_pred HHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCcc
Confidence 99999999999999999999999999999988753 8999999999999998 99999999999999999999988764
Q ss_pred h
Q 000830 611 S 611 (1265)
Q Consensus 611 ~ 611 (1265)
.
T Consensus 235 ~ 235 (339)
T COG1135 235 H 235 (339)
T ss_pred h
Confidence 3
No 107
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-49 Score=450.28 Aligned_cols=228 Identities=32% Similarity=0.532 Sum_probs=201.7
Q ss_pred CCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccC-
Q 000830 1012 TNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIK- 1085 (1265)
Q Consensus 1012 ~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~- 1085 (1265)
|+..+.|+|+|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+|+.
T Consensus 75 ~~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 75 FNHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 5667899999999999743 3468999999999999999999999999999999999997 57999999999997
Q ss_pred -CCCHHHHhcccEEEecCCCCCcccHHHHhccCCC--CCCHHHHHH-----HHHHhchHHHHHhCCCCccccccCCCCCC
Q 000830 1086 -RLNLKSLRKHIALVQQEPALFATSIYENILYGKD--GASEGEVIE-----AAKLANAHSFISALPEGYSTKVGERGVQL 1157 (1265)
Q Consensus 1086 -~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~sd~ei~~-----al~~a~l~~~i~~lp~Gldt~vge~G~~L 1157 (1265)
..++..+|++++||||+|.+|++|++|||.++.. ..++++.++ +++.++ +++++++.++++|.+|
T Consensus 154 ~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~L 226 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNAL 226 (329)
T ss_pred cccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccC
Confidence 4566789999999999999999999999997532 344555443 344444 3456778899999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1158 SGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1158 SgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
|||||||+|||||++++|+|||||||||+||+++.+.+++.|++.++++|+|+|||+++++.+ ||||+||++|+|+|.|
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g 306 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAG 306 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999999889999999999999988 9999999999999999
Q ss_pred ChhhhhhcCCc
Q 000830 1237 THSSLVENEDG 1247 (1265)
Q Consensus 1237 t~~eLl~~~~g 1247 (1265)
+|+++..++..
T Consensus 307 ~~~~l~~~~~~ 317 (329)
T PRK14257 307 ETKTIFIHPKN 317 (329)
T ss_pred CHHHHhcCCCc
Confidence 99999875443
No 108
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-49 Score=408.91 Aligned_cols=224 Identities=37% Similarity=0.583 Sum_probs=191.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+|+|||++|. +..+++|+||+|++||+++++|||||||||++|+|.|+++|++|+|++||+++++++...+|++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 78999999997 346999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCccccc-cHHHHhccCCCCC--CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 462 LVNQEPALFAT-TIRENILYGKDDA--TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
||-|..-||+. ||.|||.+-..-. +.+++.+ +..++.+.+ .|+.. ......+.+|||||+|||.+||||+.+
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~--r~~ELl~lv-gL~p~--~~~~RyP~eLSGGQQQRVGv~RALAad 153 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKK--RADELLDLV-GLDPS--EYADRYPHELSGGQQQRVGVARALAAD 153 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHH--HHHHHHHHh-CCCHH--HHhhcCchhcCcchhhHHHHHHHHhcC
Confidence 99999999986 9999998743211 2233222 222222222 23211 134566789999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-ccCEEEEEeCCEEEEeeCcchhccCCchHH
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIR-NADVIAVVQGRKIVKTGSHEELISNPNSAY 613 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 613 (1265)
|+|+|+|||++||||.++..+|+-+.++.+ ++|+|+|||++++.- -||||.+|++|+|+..++|++++.+|...|
T Consensus 154 P~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~F 231 (309)
T COG1125 154 PPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDF 231 (309)
T ss_pred CCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHH
Confidence 999999999999999999999999988754 899999999999864 599999999999999999999998875444
No 109
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-49 Score=420.16 Aligned_cols=226 Identities=37% Similarity=0.610 Sum_probs=195.9
Q ss_pred EEEEeEEEECCCC--CCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCC---HHHH
Q 000830 1018 IELRGVHFSYPSR--PEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLN---LKSL 1092 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~--~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~---l~~l 1092 (1265)
|++++|++.|+.. +...+|+||||+|++||+.||+|+||||||||++++-|+-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999863 1246899999999999999999999999999999999999999999999998887765 5567
Q ss_pred hcccEEEecCCCCCc-ccHHHHhccCCC--CCCHH----HHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1093 RKHIALVQQEPALFA-TSIYENILYGKD--GASEG----EVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1093 R~~i~~VpQdp~LF~-gTIreNl~~g~~--~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
|++||+|+|++.|++ .|+.+|++|+.. ..+.+ .+.+.++.+|+.|..++-| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 889999999999997 799999998632 23333 4556667777766655544 68999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
+|||||..+|+||+.|||||||||+|-+.|.+.|++..+ |-|+++|||.++.+++ ||||.||++|+|+|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999988754 6799999999999998 9999999999999999999998
Q ss_pred hcCCcH-HHHHHH
Q 000830 1243 ENEDGA-YFKLIN 1254 (1265)
Q Consensus 1243 ~~~~g~-f~~l~~ 1254 (1265)
.++... -++++.
T Consensus 231 ~~Pk~~~t~~fi~ 243 (339)
T COG1135 231 ANPKHAITQEFIG 243 (339)
T ss_pred cCcchHHHHHHHH
Confidence 877543 334443
No 110
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.8e-48 Score=435.76 Aligned_cols=237 Identities=26% Similarity=0.435 Sum_probs=219.2
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
|.|+++|++|+|++. +.++|+|+||+|++||+++|+||||||||||+++|+|+++ ++|+|.+||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 468999999999742 3469999999999999999999999999999999999998 79999999999999999999999
Q ss_pred eeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000830 460 IGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNP 539 (1265)
Q Consensus 460 i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 539 (1265)
|+||||+|.+|++|+++|+....+ .++++++++++..++.+++..+|++++|.++++|.+||||||||++||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999964322 4578899999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHHHH
Q 000830 540 SILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALVQL 619 (1265)
Q Consensus 540 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 619 (1265)
+||||||||++||+.+...+++.|++..+++|+|+||||++++..||+|++|++|++++.|+++++++. .+.|++++..
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhh
Confidence 999999999999999999999999987778999999999999989999999999999999999999986 5777777754
Q ss_pred H
Q 000830 620 Q 620 (1265)
Q Consensus 620 ~ 620 (1265)
.
T Consensus 237 ~ 237 (275)
T cd03289 237 S 237 (275)
T ss_pred c
Confidence 4
No 111
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-49 Score=394.96 Aligned_cols=221 Identities=33% Similarity=0.554 Sum_probs=198.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCc-----ceEEECCeeCCC--CC
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLS-----GEILLDGNNIKG--LD 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-----G~i~~~g~~~~~--~~ 452 (1265)
..++++|+++.|+ ++.+|+|||++|++++++|++|||||||||+++++.|..+..+ |+|.++|+|+.+ ++
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 3589999999997 3469999999999999999999999999999999999999875 999999999965 57
Q ss_pred hHHHhhheeEEccCCccccccHHHHhccCCCC------CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 453 LKWLRQQIGLVNQEPALFATTIRENILYGKDD------ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
...+|++||+|+|.|.-|+.||+||+.||..- .-++-++++++.|.+++.+.. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 89999999999999999999999999998421 123457788899988887643 24567788999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||+||||||.-+|+|||||||||||||.+..+|.+.|.+++++-|+|+|||.++...+ +|+..++..|+++|.|+.+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 9999999999999999999999999999999999999999999999999999998866 999999999999999999999
Q ss_pred ccCCc
Q 000830 606 ISNPN 610 (1265)
Q Consensus 606 ~~~~~ 610 (1265)
..+|.
T Consensus 236 F~~P~ 240 (253)
T COG1117 236 FTNPK 240 (253)
T ss_pred hcCcc
Confidence 87753
No 112
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=7.7e-48 Score=434.16 Aligned_cols=193 Identities=30% Similarity=0.433 Sum_probs=162.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
-|.|+||+|.|++.+ .++++++|-|.++++||+|||||+|||||++++.|...|+.|.|.-.-. .++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccc
Confidence 599999999998654 6899999999999999999999999999999999999999998865321 123
Q ss_pred EEEec---CCCCCcccHHHHhccCCCC-CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000830 1097 ALVQQ---EPALFATSIYENILYGKDG-ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVL 1172 (1265)
Q Consensus 1097 ~~VpQ---dp~LF~gTIreNl~~g~~~-~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALl 1172 (1265)
++--| +..-++-|.-|+...-.++ .+.+++...+.+.|+..-.+ +.++ .+||+|||.||++||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q------~~p~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQ------VVPM----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccc------ccch----hhcccccchhHHHHHHHh
Confidence 33344 3345677888888765554 56678888888888764333 3334 379999999999999999
Q ss_pred cCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEE
Q 000830 1173 KNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIE 1234 (1265)
Q Consensus 1173 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive 1234 (1265)
+.|.||||||||++||.+|-..+.++|.+. ..+||+|+|+.-.|.. +++|.+.++|.+..
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~ 586 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTK 586 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceee
Confidence 999999999999999999999999999876 5689999999999987 99999999999865
No 113
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-48 Score=388.16 Aligned_cols=221 Identities=34% Similarity=0.536 Sum_probs=200.1
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCC-----cEEEECCcccCC--CC
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTA-----GKVMVDGIDIKR--LN 1088 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~-----G~I~idG~di~~--~~ 1088 (1265)
..++++|+++.|. +..+|+|||++|++++.+|++|||||||||++++|-|+.+... |+|.+||+||.+ ++
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 3589999999996 3468999999999999999999999999999999999999875 999999999975 68
Q ss_pred HHHHhcccEEEecCCCCCcccHHHHhccCCC------CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1089 LKSLRKHIALVQQEPALFATSIYENILYGKD------GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
.-.||+++|+|+|.|.-|..||+||+.||.. ..-|+-++++++.|.+||-+.. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 9999999999999999999999999999832 1224567899999999998764 24456778999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
|||||||||.-+|+|||||||||||||.+...|.+.|.++.++-|+++|||.+.-..+ +|+...+-.|+++|+|+-+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 9999999999999999999999999999999999999999999999999999998876 999999999999999999999
Q ss_pred hhcCC
Q 000830 1242 VENED 1246 (1265)
Q Consensus 1242 l~~~~ 1246 (1265)
..++.
T Consensus 236 F~~P~ 240 (253)
T COG1117 236 FTNPK 240 (253)
T ss_pred hcCcc
Confidence 87653
No 114
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3e-46 Score=414.09 Aligned_cols=235 Identities=51% Similarity=0.802 Sum_probs=217.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999642 246899999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000830 1098 LVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEI 1177 (1265)
Q Consensus 1098 ~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1177 (1265)
|+||++.+|+.|++||+.++....+.+++.++++..++.+++..+|.|+++.....+.+||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999886544556677788888899999999999999999999999999999999999999999999
Q ss_pred EEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHH
Q 000830 1178 LLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENEDGAYFKLIN 1254 (1265)
Q Consensus 1178 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~ 1254 (1265)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++++ ..+.|..+++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~-~~~~~~~~~~ 235 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLA-ENGLYAYLYQ 235 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHh-ccChHHHHHh
Confidence 999999999999999999999999877899999999999998899999999999999999999998 5788888764
No 115
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-47 Score=391.33 Aligned_cols=222 Identities=33% Similarity=0.549 Sum_probs=196.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+|+|||++|. +..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999997 346899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCc-ccHHHHhccCC--CCCCH----HHHHHHHHHhchH--HHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1098 LVQQEPALFA-TSIYENILYGK--DGASE----GEVIEAAKLANAH--SFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1098 ~VpQdp~LF~-gTIreNl~~g~--~~~sd----~ei~~al~~a~l~--~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
||-|.--||. -||.|||..-. ...+. +.+.+-++++++. +|.++.| ..|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHH
Confidence 9999999995 59999997631 12333 4455666677774 3655555 57999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcC
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENE 1245 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~ 1245 (1265)
|||..+|+||++|||.+||||-|...+|+-+.+..+ ++|+|+|||++++... +|||+||++|+|+.+|+|+++++++
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999988764 7899999999999655 9999999999999999999999988
Q ss_pred CcHHHHHH
Q 000830 1246 DGAYFKLI 1253 (1265)
Q Consensus 1246 ~g~f~~l~ 1253 (1265)
...|-+-+
T Consensus 228 an~FV~~f 235 (309)
T COG1125 228 ANDFVEDF 235 (309)
T ss_pred cHHHHHHH
Confidence 77775443
No 116
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.9e-46 Score=417.23 Aligned_cols=241 Identities=31% Similarity=0.556 Sum_probs=223.3
Q ss_pred CcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHh
Q 000830 1014 VEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLR 1093 (1265)
Q Consensus 1014 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR 1093 (1265)
..|.|+++|++++|+.. ..++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 46789999999999742 24689999999999999999999999999999999999999999999999999998888999
Q ss_pred cccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000830 1094 KHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLK 1173 (1265)
Q Consensus 1094 ~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr 1173 (1265)
++++|+||+|.+|++|++||+.+.. ...+++++++++.+++.+++..+|.|+++.+++.+.+||||||||++||||+++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPEC-KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCC-CCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999997642 234567888889999999999999999999999999999999999999999999
Q ss_pred CCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHH
Q 000830 1174 NPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENEDGAYFKLI 1253 (1265)
Q Consensus 1174 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~ 1253 (1265)
+|++|||||||++||++++..+.+.+++..+++|+|++||+++.+..||||++|++|++++.|+++++++..++.|+.++
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 99999999999999999999999999988778999999999999999999999999999999999999987778899888
Q ss_pred HHh
Q 000830 1254 NLQ 1256 (1265)
Q Consensus 1254 ~~~ 1256 (1265)
..+
T Consensus 254 ~~~ 256 (257)
T cd03288 254 RTD 256 (257)
T ss_pred hcc
Confidence 654
No 117
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-46 Score=430.53 Aligned_cols=226 Identities=29% Similarity=0.490 Sum_probs=196.6
Q ss_pred CCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCC-
Q 000830 377 KLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKG- 450 (1265)
Q Consensus 377 ~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~- 450 (1265)
+..+.|+++|++|+|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++..
T Consensus 76 ~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~ 154 (329)
T PRK14257 76 NHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSK 154 (329)
T ss_pred CcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccc
Confidence 445689999999999642 3469999999999999999999999999999999999997 579999999999973
Q ss_pred -CChHHHhhheeEEccCCccccccHHHHhccCCCC--CCHHHHH-----HHHHHhcHHHHHhcCcccccccccCCCCCCC
Q 000830 451 -LDLKWLRQQIGLVNQEPALFATTIRENILYGKDD--ATMEEIT-----RAAKLSEAMSFISNLPERFETQVGERGIQLS 522 (1265)
Q Consensus 451 -~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~~~~~~~-----~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 522 (1265)
.+...+|+.++||||+|++|++||+|||.|+... .++++.+ ++++.+ .+++++++.++++|.+||
T Consensus 155 ~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~-------~L~~~l~~~~~~~~~~LS 227 (329)
T PRK14257 155 KISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSA-------ALWDEVKDDLDKAGNALS 227 (329)
T ss_pred ccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHc-------CCcchhhhhhhCCcccCC
Confidence 4556789999999999999999999999987421 2333332 222222 255567788999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeC
Q 000830 523 GGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 523 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 601 (1265)
||||||++|||||+++|+|||||||||+||+++...+++.|+++.+++|+|+|||+++++.. ||+|++|++|+|++.|+
T Consensus 228 gGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~ 307 (329)
T PRK14257 228 GGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGE 307 (329)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998888999999999999987 99999999999999999
Q ss_pred cchhccCCc
Q 000830 602 HEELISNPN 610 (1265)
Q Consensus 602 ~~~l~~~~~ 610 (1265)
++++...+.
T Consensus 308 ~~~l~~~~~ 316 (329)
T PRK14257 308 TKTIFIHPK 316 (329)
T ss_pred HHHHhcCCC
Confidence 999987543
No 118
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-43 Score=379.78 Aligned_cols=470 Identities=19% Similarity=0.235 Sum_probs=350.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000830 108 VYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYI 187 (1265)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~srl~~D~~~i~~~~~~~~~~~~~~~ 187 (1265)
.++.++..+.+.+........++.+..++|.++.++++.-|+.-+++ -+++.++.++++|+..|. +-...++.+....
T Consensus 55 ~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier-~~~~rlla~L~~Dvr~IS-f~~s~lp~~~qa~ 132 (546)
T COG4615 55 LGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER-LGSARLLAGLTSDVRNIS-FAFSRLPELVQAI 132 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-hcccchhhhhccccccee-ehHhhhHHHHHHH
Confidence 33334444556666677788899999999999999999999999997 689999999999999998 4445678889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHH--HHH
Q 000830 188 SRFLGGFIIGFARVWQISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAGEIAEEVIGNVRTVQAFAGEDK--AVK 265 (1265)
Q Consensus 188 ~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~~~~e~~--~~~ 265 (1265)
..++++.+++.|+|+++.++.++.+.+..+...+...+..+.....++..+++.+..+-.++|-+..+...--.+ ..+
T Consensus 133 il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~ 212 (546)
T COG4615 133 ILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNN 212 (546)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhh
Confidence 999999999999999998888888878778888888888888999999999999999999999999988653322 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 000830 266 VYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGESFTTMLNVVIAGLSLGQAAPDITAF 345 (1265)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~ 345 (1265)
.|....+...+..............+.+++.+..+.+++|.... -+.-+.....++.+..+....|+.+....+..+
T Consensus 213 ~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~---~~w~st~~a~tivlvlLflr~pL~s~vgilP~l 289 (546)
T COG4615 213 LYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALS---LGWASTNVAATIVLVLLFLRTPLLSAVGILPTL 289 (546)
T ss_pred hcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hccchhhHHHHHHHHHHHHhhHHHHHHhhhhHH
Confidence 33332223333211111111112222333333333334443221 122222233333344445556888888899999
Q ss_pred HHHHHHHHHHHHHhccccccccccccCCCCCCCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHH
Q 000830 346 IRAKAAAYPIFEMIERDTMSKASSKTGRKLDKLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKST 425 (1265)
Q Consensus 346 ~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKST 425 (1265)
.+|.+|.++|.++-..++..+- + .....+. -..|+++||.|+|++.. .-+.-||++|++||++-|+|.|||||||
T Consensus 290 ~~AqvA~~kiakle~~~~~a~~-~-~~q~~p~-~~~lelrnvrfay~~~~--FhvgPiNl~ikrGelvFliG~NGsGKST 364 (546)
T COG4615 290 LTAQVAFNKIAKLELAPYKADF-P-RPQAFPD-WKTLELRNVRFAYQDNA--FHVGPINLTIKRGELVFLIGGNGSGKST 364 (546)
T ss_pred HHHHHHHHHHHHhhcCCccccC-C-CCCcCCc-ccceeeeeeeeccCccc--ceecceeeEEecCcEEEEECCCCCcHHH
Confidence 9999999999887543322111 1 1111122 34799999999997432 3578899999999999999999999999
Q ss_pred HHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccHHHHhccCCCC-CCHHHHHHHHHHhcHHHHHh
Q 000830 426 VISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDD-ATMEEITRAAKLSEAMSFIS 504 (1265)
Q Consensus 426 l~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~-~~~~~~~~~~~~~~~~~~i~ 504 (1265)
++++|.|+|.|++|+|++||+++..-++++.|+-++-|+-|.|||+.++ |.+. ++.+.+..-.+.-++....
T Consensus 365 ~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~kt- 437 (546)
T COG4615 365 LAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAHKT- 437 (546)
T ss_pred HHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhhhh-
Confidence 9999999999999999999999999999999999999999999998764 3333 5555554444333222222
Q ss_pred cCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhh
Q 000830 505 NLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTI 582 (1265)
Q Consensus 505 ~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~ 582 (1265)
++.+|--+ ...||-|||.|+|+--|++-+.||++|||=-+--||.=++.+.+.+.... .|||++.|||+=...
T Consensus 438 sl~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF 512 (546)
T COG4615 438 SLNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYF 512 (546)
T ss_pred cccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhh
Confidence 22222111 24699999999999999999999999999999999999998887765443 499999999999999
Q ss_pred hccCEEEEEeCCEEEEe
Q 000830 583 RNADVIAVVQGRKIVKT 599 (1265)
Q Consensus 583 ~~~d~i~~l~~G~i~~~ 599 (1265)
..|||++.|++|+++|.
T Consensus 513 ~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 513 IHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhHHHHHHHhcCceeec
Confidence 99999999999999875
No 119
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.5e-45 Score=451.93 Aligned_cols=207 Identities=24% Similarity=0.399 Sum_probs=171.5
Q ss_pred CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC---CcceEEECCeeCCCCChHHHhhheeEEccCCccccc-
Q 000830 397 VAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP---LSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFAT- 472 (1265)
Q Consensus 397 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~---~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~- 472 (1265)
..+|+|++.-++||+.+.+.||.|||||||++.|+|-.+- ..|+|.+||.+.++..+ ++.++|++|+..-|+.
T Consensus 128 ~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~---~~~~aY~~e~DvH~p~l 204 (1391)
T KOG0065|consen 128 IQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVP---KKTVAYNSEQDVHFPEL 204 (1391)
T ss_pred ceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCccccccc---CceEEecccccccccee
Confidence 4689999999999999999999999999999999998764 35799999999988776 7789999999988876
Q ss_pred cHHHHhccCC----CCCCHHHHHHHHH---HhcHHHHHhcCcccccccccCCC-CCCChHHHHHHHHHHHhccCCCEEEE
Q 000830 473 TIRENILYGK----DDATMEEITRAAK---LSEAMSFISNLPERFETQVGERG-IQLSGGQKQRIAISRAIVKNPSILLL 544 (1265)
Q Consensus 473 ti~~ni~~~~----~~~~~~~~~~~~~---~~~~~~~i~~l~~g~~t~~~~~g-~~LSgGqkqriaiARal~~~~~illl 544 (1265)
||||-+-|.. +..+.+++.+..+ ..+..-.+-.|....||.||... ...|||||.||++|-+++.+|+++..
T Consensus 205 TVreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~ 284 (1391)
T KOG0065|consen 205 TVRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFW 284 (1391)
T ss_pred EEeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeee
Confidence 9999998752 2111222222222 22222235568888999999876 56999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCch--hhhccCEEEEEeCCEEEEeeCcchhc
Q 000830 545 DEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLS--TIRNADVIAVVQGRKIVKTGSHEELI 606 (1265)
Q Consensus 545 DE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~--~~~~~d~i~~l~~G~i~~~g~~~~l~ 606 (1265)
||+|.+||..|.-++.++|+++.+ +.|.++.=|+.+ +....|.|++|.+|+++..|+.++.+
T Consensus 285 De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~ 350 (1391)
T KOG0065|consen 285 DEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVL 350 (1391)
T ss_pred ecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHH
Confidence 999999999999999999998753 778888888765 45669999999999999999998875
No 120
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.9e-45 Score=407.66 Aligned_cols=234 Identities=49% Similarity=0.807 Sum_probs=213.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4789999999642 246999999999999999999999999999999999999999999999999998888788889999
Q ss_pred EEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000830 462 LVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSI 541 (1265)
Q Consensus 462 ~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 541 (1265)
|++|++++|+.|++||+.++.+....+++.++++..++.+.+..+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999987654455667777777788889999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHH
Q 000830 542 LLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALV 617 (1265)
Q Consensus 542 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 617 (1265)
|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|+++++..+ .+.|..++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 234 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLY 234 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHH
Confidence 9999999999999999999999988778999999999999988999999999999999999998876 66776654
No 121
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.1e-46 Score=381.91 Aligned_cols=228 Identities=33% Similarity=0.539 Sum_probs=191.5
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChH---HH
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLK---WL 456 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~ 456 (1265)
..|++++|+|+|++ +.+++|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.++|+++.+++.+ .+
T Consensus 7 ~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 46999999999964 4599999999999999999999999999999999999999999999999999888764 57
Q ss_pred hhheeEEccCCccccc-cHHHHhccCCCCC---CHHHHHHHHHHhcHHHHHhcCccccccc-ccCCCCCCChHHHHHHHH
Q 000830 457 RQQIGLVNQEPALFAT-TIRENILYGKDDA---TMEEITRAAKLSEAMSFISNLPERFETQ-VGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 457 r~~i~~v~Q~~~lf~~-ti~~ni~~~~~~~---~~~~~~~~~~~~~~~~~i~~l~~g~~t~-~~~~g~~LSgGqkqriai 531 (1265)
|+++|+++|+..||+. ||+||+.|...+. ..+.+.+-+ ... ++.. |+... ....+.+||||++.|+||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv-~~K----L~~V--GL~~~~~~~~PsELSGGM~KRvaL 156 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELV-LMK----LELV--GLRGAAADLYPSELSGGMRKRVAL 156 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHH-HHH----HHhc--CCChhhhhhCchhhcchHHHHHHH
Confidence 8999999999999987 9999999964322 333333221 111 1110 22222 223457899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|||+..||+|+++|||||+|||.+...+.+.|+++.+ +.|+|+|||+++++.. ||+|+++.+|+|+..|+++|+.+.
T Consensus 157 ARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~s 236 (263)
T COG1127 157 ARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLAS 236 (263)
T ss_pred HHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999988864 8999999999999987 899999999999999999999987
Q ss_pred CchHHHHHH
Q 000830 609 PNSAYAALV 617 (1265)
Q Consensus 609 ~~~~~~~~~ 617 (1265)
++...+++.
T Consensus 237 d~P~v~qf~ 245 (263)
T COG1127 237 DDPWVRQFF 245 (263)
T ss_pred CCHHHHHHh
Confidence 655555443
No 122
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-45 Score=411.92 Aligned_cols=217 Identities=35% Similarity=0.555 Sum_probs=191.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++||+++|++. .+++|+||+|++||+++|+|||||||||+|++|+|+.+|++|+|.|||.++++++++. ++|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999742 1899999999999999999999999999999999999999999999999999988875 679
Q ss_pred eEEccCCccccc-cHHHHhccCCCCC------CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDDA------TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
|+|+|+..||+. ||+|||.||.... -++++.++++..++.+.++ .++.+|||||||||||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~-----------r~P~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLN-----------RKPLQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHh-----------cCcccCChhhHHHHHHHH
Confidence 999999999987 9999999997533 2345566666665555444 455689999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCc
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPN 610 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 610 (1265)
||+++|+++|||||+|+||++.+..+...|+++.+ +.|+|.|||+..++.. ||||.||++|+|.+.|++.|+..++.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999888888754 7899999999998866 99999999999999999999998765
Q ss_pred hHH
Q 000830 611 SAY 613 (1265)
Q Consensus 611 ~~~ 613 (1265)
..+
T Consensus 227 n~f 229 (338)
T COG3839 227 NLF 229 (338)
T ss_pred chh
Confidence 443
No 123
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.1e-45 Score=397.11 Aligned_cols=214 Identities=36% Similarity=0.558 Sum_probs=188.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.++++|++|+|++ +++|+|+||++++||+++|+||||||||||+|+|+|+.+|.+|+|.+||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 4789999999973 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEccCCcc-ccccHHHHhccCCCCC-------C---HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHH
Q 000830 461 GLVNQEPAL-FATTIRENILYGKDDA-------T---MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRI 529 (1265)
Q Consensus 461 ~~v~Q~~~l-f~~ti~~ni~~~~~~~-------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 529 (1265)
|||||++.. |.-||+|-+.+|+... + .+.+.+|.+..++.++. ...-.+||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHHHHH
Confidence 999999754 5569999999996321 1 22456666666655543 233467999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhh-hccCEEEEEeCCEEEEeeCcchhc
Q 000830 530 AISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTI-RNADVIAVVQGRKIVKTGSHEELI 606 (1265)
Q Consensus 530 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~-~~~d~i~~l~~G~i~~~g~~~~l~ 606 (1265)
.|||||+++|+||+||||||+||...+-.+++.++++. +|+|+|+|.|+++.. +.||++++|++|+++..|+++|++
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999986 389999999999876 569999999999999999999998
Q ss_pred cC
Q 000830 607 SN 608 (1265)
Q Consensus 607 ~~ 608 (1265)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 64
No 124
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-45 Score=402.03 Aligned_cols=234 Identities=53% Similarity=0.846 Sum_probs=217.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999632 35899999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000830 1098 LVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEI 1177 (1265)
Q Consensus 1098 ~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1177 (1265)
|+||+|.+|++|++||+.++....+++++.++++.+++.+.+..+|.|+++.+.....+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999887655667778888888999999999999999999999999999999999999999999999
Q ss_pred EEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHHH
Q 000830 1178 LLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENEDGAYFKLIN 1254 (1265)
Q Consensus 1178 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~~ 1254 (1265)
|||||||++||+++...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+++++.+ ..+.|..++.
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~-~~~~~~~~~~ 234 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA-KGGLYAEMWK 234 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh-cccHHHHHHh
Confidence 999999999999999999999998877889999999999998899999999999999999999987 5677777664
No 125
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.1e-44 Score=401.73 Aligned_cols=235 Identities=62% Similarity=0.983 Sum_probs=214.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++..+.++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997533346899999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000830 1098 LVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEI 1177 (1265)
Q Consensus 1098 ~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1177 (1265)
|+||+|.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++.+.....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999886555556677778888899999999999999999999999999999999999999999999
Q ss_pred EEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCCcHHHHHH
Q 000830 1178 LLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENEDGAYFKLI 1253 (1265)
Q Consensus 1178 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~ 1253 (1265)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+ ..+.+++++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~-~~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA-QKGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh-cChhHHHHh
Confidence 999999999999999999999998877899999999999998999999999999999999999987 556565554
No 126
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-45 Score=401.39 Aligned_cols=233 Identities=58% Similarity=0.933 Sum_probs=214.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++. ..++++|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999743 235899999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000830 1098 LVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEI 1177 (1265)
Q Consensus 1098 ~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1177 (1265)
|+||+|.+|..|++||+.++....+.+++.+.++..++.++++.+|.|+++.++....+||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999887555566677788888899999999999999999999999999999999999999999999
Q ss_pred EEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCCcHHHHH
Q 000830 1178 LLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENEDGAYFKL 1252 (1265)
Q Consensus 1178 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l 1252 (1265)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.. ..+.|+.+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~-~~~~~~~~ 233 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLA-QGGVYAKL 233 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHH-cCcchhhh
Confidence 999999999999999999999999888899999999999998899999999999999999999987 45655543
No 127
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.5e-44 Score=396.29 Aligned_cols=221 Identities=33% Similarity=0.625 Sum_probs=207.1
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcc
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKH 1095 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 1095 (1265)
|.|+++|++++|+.. +.++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 468999999999743 2468999999999999999999999999999999999999999999999999998888889999
Q ss_pred cEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000830 1096 IALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNP 1175 (1265)
Q Consensus 1096 i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p 1175 (1265)
++|+||+|.+|++|++||+.+.. ..+.+++.++++..++.+++..+|.|+++.+++.+.+||||||||++|||||+++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFG-EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCC-CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998653 35677889999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecCh
Q 000830 1176 EILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTH 1238 (1265)
Q Consensus 1176 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~ 1238 (1265)
++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 999999999999999999999999998778999999999999999999999999999998863
No 128
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.4e-44 Score=402.81 Aligned_cols=240 Identities=31% Similarity=0.503 Sum_probs=217.5
Q ss_pred CCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH
Q 000830 377 KLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL 456 (1265)
Q Consensus 377 ~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~ 456 (1265)
...+.|+++|++++|++. +..+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+
T Consensus 15 ~~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 93 (257)
T cd03288 15 GLGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTL 93 (257)
T ss_pred cCCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHH
Confidence 356789999999999742 2459999999999999999999999999999999999999999999999999988888888
Q ss_pred hhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 457 RQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 457 r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
|+.|+||+|+|++|++|++||+..... ...+++.++.+..++.+.+..+|.|+++.+++.+.+||||||||++|||||+
T Consensus 94 ~~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 94 RSRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred hhhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999976432 2345667777777888899999999999999999999999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHH
Q 000830 537 KNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAAL 616 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 616 (1265)
++|++|||||||++||++++..+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+...+.|+++
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~ 252 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASL 252 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHH
Confidence 99999999999999999999999999988777899999999999998899999999999999999999987656667776
Q ss_pred HH
Q 000830 617 VQ 618 (1265)
Q Consensus 617 ~~ 618 (1265)
+.
T Consensus 253 ~~ 254 (257)
T cd03288 253 VR 254 (257)
T ss_pred Hh
Confidence 54
No 129
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-44 Score=398.26 Aligned_cols=226 Identities=52% Similarity=0.889 Sum_probs=211.5
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcc
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKH 1095 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 1095 (1265)
|.|+++|++++|++. .++++|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~--~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDEK--KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCCC--CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 468999999999632 358999999999999999999999999999999999999999999999999988888889999
Q ss_pred cEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000830 1096 IALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNP 1175 (1265)
Q Consensus 1096 i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p 1175 (1265)
++|+||++.+|.+|++||+.++.+...++++.++++..++.++++.+|.|+++.++....+||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998876555667788888899999999999999999999999999999999999999999999
Q ss_pred CEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhh
Q 000830 1176 EILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1176 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|+++++++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999877899999999999998899999999999999999988876
No 130
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-45 Score=377.43 Aligned_cols=216 Identities=35% Similarity=0.561 Sum_probs=185.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCC---hHHHh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLD---LKWLR 457 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r 457 (1265)
.|+++||+..||+ ++.+|+||||+|++||++||+||||||||||+++|.|+.+|++|+|.++|.++.... ...+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 457999999999999999999999999999999999999999999999999988776 55678
Q ss_pred hheeEEccCCccccc-cHHHHhccCCCCC-----------CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 458 QQIGLVNQEPALFAT-TIRENILYGKDDA-----------TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~~-ti~~ni~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
++|||++|++.|.+. ||.+|+..|+-.. +.++-.. +.+-++.+ |+....-.+..+|||||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~------Al~aLerv--gi~~~A~qra~~LSGGQ 152 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQ------ALDALERV--GILDKAYQRASTLSGGQ 152 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHH------HHHHHHHc--CcHHHHHHHhccCCcch
Confidence 899999999999976 9999999886432 2222211 11222222 22223445677999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCc
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSH 602 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 602 (1265)
+|||+|||||+++|+|+|-|||+|+|||.+.+.+++.|++.. .|.|+|+.-|.++..++ ||||+-|++|+|+.+|+.
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 999999999999999999999999999999999999999875 48999999999999876 999999999999999999
Q ss_pred chhc
Q 000830 603 EELI 606 (1265)
Q Consensus 603 ~~l~ 606 (1265)
+|+-
T Consensus 233 ~el~ 236 (258)
T COG3638 233 SELT 236 (258)
T ss_pred hhhh
Confidence 9863
No 131
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-45 Score=412.36 Aligned_cols=218 Identities=37% Similarity=0.595 Sum_probs=190.2
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
..++++||+++|+ +..+++|+||+|++||+++++|||||||||+|++|+||.+|++|+|.+||+++...+++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3699999999997 45699999999999999999999999999999999999999999999999999998776 468
Q ss_pred eeEEccCCccccc-cHHHHhccCCCC---CCHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDD---ATME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
|++|+|+..||+. ||+|||.||... ...+ .+.++.++.++.++ -..++.+|||||+||+||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~-----------~~R~p~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGF-----------ADRKPHQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhh-----------hhhChhhhChHHHHHHHH
Confidence 9999999999986 999999999751 1222 45555555554443 345567899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhh-ccCEEEEEeCCEEEEeeCcchhccC
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIR-NADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
||||..+|++||||||.||||.+-+..++..++++. .|.|.|+|||+-++.- .+|||+||++|+|...|+++|+..+
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 999999999999999999999999999998888764 3899999999998864 5999999999999999999999988
Q ss_pred CchHH
Q 000830 609 PNSAY 613 (1265)
Q Consensus 609 ~~~~~ 613 (1265)
|...|
T Consensus 228 P~~~f 232 (352)
T COG3842 228 PATRF 232 (352)
T ss_pred cchHH
Confidence 75544
No 132
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1e-44 Score=416.28 Aligned_cols=225 Identities=32% Similarity=0.517 Sum_probs=193.2
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH---Hh
Q 000830 1018 IELRGVHFSYPSRP-EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS---LR 1093 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---lR 1093 (1265)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996422 246999999999999999999999999999999999999999999999999999887554 58
Q ss_pred cccEEEecCCCCCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000830 1094 KHIALVQQEPALFA-TSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1094 ~~i~~VpQdp~LF~-gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrla 1166 (1265)
++|+||||++.+|. .|++||+.++.. ..+. +.+.++++.+++.++.+.. ...||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~-----------~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSY-----------PSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHH
Confidence 89999999999995 799999987531 2232 3456677777776654433 3579999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||||+.+|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999999864 7899999999999976 99999999999999999999987
Q ss_pred cCCcHH-HHHH
Q 000830 1244 NEDGAY-FKLI 1253 (1265)
Q Consensus 1244 ~~~g~f-~~l~ 1253 (1265)
++...+ ..++
T Consensus 231 ~p~~~~~~~~~ 241 (343)
T TIGR02314 231 HPKTPLAQKFI 241 (343)
T ss_pred CCCcHHHHHHH
Confidence 554444 3343
No 133
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.1e-44 Score=354.68 Aligned_cols=209 Identities=36% Similarity=0.568 Sum_probs=186.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|.+++|.|+|...+ =.++++|++||++||+||||||||||+|+|+||..|.+|+|.|||+|.....+.+ +-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~--RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAE--RPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCccc--CChh
Confidence 56789999996432 3589999999999999999999999999999999999999999999988776653 5699
Q ss_pred EEccCCccccc-cHHHHhccCCC-CC-----CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 462 LVNQEPALFAT-TIRENILYGKD-DA-----TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~-~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
+++||..||.. ||++||.+|.. .. ..+.+..++...++..+...||. +||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999987 99999999963 21 34667888888899888888884 699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|+++-|||+||||+|+|||.-+......+.++. ++.|++||||+++.++. +|+++++++|+|.++|+.+++...
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999988888887775 48899999999999876 999999999999999999998865
No 134
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4e-44 Score=402.09 Aligned_cols=211 Identities=27% Similarity=0.366 Sum_probs=170.2
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhc
Q 000830 1015 EGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRK 1094 (1265)
Q Consensus 1015 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~ 1094 (1265)
+..+++.+|+|.|++.+. +.++++++.+..-+++++||++|+||||+++++.+-..|..|.+-+.+ |.
T Consensus 360 ~p~l~i~~V~f~y~p~~y-~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ 427 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPSEY-QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RL 427 (582)
T ss_pred CCeeEEEeeeccCCCcch-hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cc
Confidence 347999999999985433 789999999999999999999999999999999999999999988865 77
Q ss_pred ccEEEecCCCCC-cccHHH--HhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCC-CCCChhHHHHHHHHHH
Q 000830 1095 HIALVQQEPALF-ATSIYE--NILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERG-VQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1095 ~i~~VpQdp~LF-~gTIre--Nl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G-~~LSgGQkQrlaLARA 1170 (1265)
+|+|-.|.-+=| +-.+-. -+.--.|+.+++|+.+.|...|+.. ++.-.+ ..||||||=|+++|-+
T Consensus 428 ri~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g-----------~la~~si~~LSGGQKsrvafA~~ 496 (582)
T KOG0062|consen 428 RIKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSG-----------ELALQSIASLSGGQKSRVAFAAC 496 (582)
T ss_pred eecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCc-----------hhhhccccccCCcchhHHHHHHH
Confidence 899999976533 222211 1111245668999999987776543 333333 4699999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCCcHH
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENEDGAY 1249 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f 1249 (1265)
.+.+|.+|||||||..||-++-.++-++|+.. +.-||+|||+.+.+.. |+.++|.++|+|.-. +-....|
T Consensus 497 ~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~i-------eg~~~~y 567 (582)
T KOG0062|consen 497 TWNNPHLLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTPI-------EGGIDKY 567 (582)
T ss_pred hcCCCcEEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEee-------eccHHHH
Confidence 99999999999999999999999999999876 4579999999999987 999999999999762 2112246
Q ss_pred HHHHHHhh
Q 000830 1250 FKLINLQQ 1257 (1265)
Q Consensus 1250 ~~l~~~~~ 1257 (1265)
.++...+.
T Consensus 568 Kkl~~~e~ 575 (582)
T KOG0062|consen 568 KKLLGAEL 575 (582)
T ss_pred HHHHHHHH
Confidence 77766553
No 135
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.6e-45 Score=360.32 Aligned_cols=207 Identities=32% Similarity=0.522 Sum_probs=183.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh---HHHhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL---KWLRQ 458 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~ 458 (1265)
|+|+||+++|++. .++|+||||+|++||++-++||||||||||+|+|.+...|+.|+|.++|+|+..+.. .-+|+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7899999999864 569999999999999999999999999999999999999999999999999987754 56899
Q ss_pred heeEEccCCccccc-cHHHHhccCCCCC------CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 459 QIGLVNQEPALFAT-TIRENILYGKDDA------TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~~-ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
+||+|+||..|... ||.||++|...-. -.+++.++++..++.+....|| .+||||||||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 99999999988866 9999999865321 2345666777777777776666 4799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeC
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 601 (1265)
|||++.+|++||-||||.+|||.+...|++.+.++. .|.||++.||+.+.+.. --|++.+++|+++....
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 999999999999999999999999999999998875 59999999999999987 56999999999987644
No 136
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-44 Score=375.41 Aligned_cols=228 Identities=29% Similarity=0.500 Sum_probs=191.8
Q ss_pred cEEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCC-CHHHHhc
Q 000830 1017 TIELRGVHFSYPSRPE-VVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRL-NLKSLRK 1094 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~-~l~~lR~ 1094 (1265)
.++++|+++.|+.+.. .++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.+.... +....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 4899999999975421 2589999999999999999999999999999999999999999999999877653 3446788
Q ss_pred ccEEEecCCC--CC-cccHHHHhccC----CCCCCHHHHHHHHHHhchHH-HHHhCCCCccccccCCCCCCChhHHHHHH
Q 000830 1095 HIALVQQEPA--LF-ATSIYENILYG----KDGASEGEVIEAAKLANAHS-FISALPEGYSTKVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1095 ~i~~VpQdp~--LF-~gTIreNl~~g----~~~~sd~ei~~al~~a~l~~-~i~~lp~Gldt~vge~G~~LSgGQkQrla 1166 (1265)
.+.+|+|||. |= .-||++-|.=+ .-+....+++++++.+++.+ |....| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 9999999996 21 23666665322 11233566899999999865 344444 569999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCc--eEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKR--TTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~--TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||||.-+|++||||||||+||.-.++.|++.+.+..+++ |.|+|||+++.+.. ||||+||++|+++|.++-.++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 9999999999999999999999999999999999988765 99999999999998 99999999999999999999998
Q ss_pred cCCcHHHHHHHH
Q 000830 1244 NEDGAYFKLINL 1255 (1265)
Q Consensus 1244 ~~~g~f~~l~~~ 1255 (1265)
.....|.+..-.
T Consensus 232 ~~~h~ytr~Ll~ 243 (252)
T COG1124 232 HPSHPYTRELLE 243 (252)
T ss_pred CCccHHHHHHHH
Confidence 656667665543
No 137
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-44 Score=380.14 Aligned_cols=198 Identities=35% Similarity=0.522 Sum_probs=167.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.+++++|+++|+. ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.++..- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4789999999974 5699999999999999999999999999999999999999999999999987433 3469
Q ss_pred eEEccCCcccc-ccHHHHhccCCCCC--CH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 461 GLVNQEPALFA-TTIRENILYGKDDA--TM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 461 ~~v~Q~~~lf~-~ti~~ni~~~~~~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
+||+|++.||+ -||+||+.+|.... +. +.+.+..+..++ ...-...+.+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL-----------~~~~~~~P~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGL-----------AGFEDKYPHQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCC-----------cchhhcCccccChHHHHHHHHHH
Confidence 99999999998 49999999987542 11 223333333333 33344566789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeC--CEEE
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQG--RKIV 597 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~--G~i~ 597 (1265)
||+.+|+||+||||++|||+.|+..+++.+.++. .++|+++|||++++.-. +|||++|.+ |+|.
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 9999999999999999999999999999998874 37999999999998755 999999999 4553
No 138
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-44 Score=396.43 Aligned_cols=233 Identities=52% Similarity=0.811 Sum_probs=212.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
++++|++++|++. ..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999632 35899999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000830 462 LVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSI 541 (1265)
Q Consensus 462 ~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 541 (1265)
|++|++++|+.|++||+.++.+..+.+++.++++..++.+.+..+|.|+++.+..++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999988665566667777777788888899999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHHHHH
Q 000830 542 LLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYAALV 617 (1265)
Q Consensus 542 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 617 (1265)
|||||||++||+++...+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++... ...|+.++
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~ 233 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMW 233 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHH
Confidence 9999999999999999999999888668999999999999988999999999999999998888765 45555443
No 139
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-44 Score=396.23 Aligned_cols=226 Identities=57% Similarity=0.886 Sum_probs=207.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999743 235899999999999999999999999999999999999999999999999988777778889999
Q ss_pred EEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000830 462 LVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSI 541 (1265)
Q Consensus 462 ~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 541 (1265)
|++|++.+|+.|++||+.++.+....+++.+.++..++.+.+..+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999988655555667777777788889999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 542 LLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 542 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
+||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 9999999999999999999999988779999999999999988999999999999999999888765
No 140
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.7e-44 Score=377.73 Aligned_cols=209 Identities=36% Similarity=0.537 Sum_probs=170.9
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH---H-
Q 000830 382 IEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW---L- 456 (1265)
Q Consensus 382 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~- 456 (1265)
++++||++.|.... ...+|+++||+|++||++||+||||||||||+++|.|+..|++|+|.++|+|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 246999999999999999999999999999999999999999999999999999887543 3
Q ss_pred hhheeEEccCCccccc-cHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccc-cCCCCCCChHHHHHHHHH
Q 000830 457 RQQIGLVNQEPALFAT-TIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQV-GERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 457 r~~i~~v~Q~~~lf~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-~~~g~~LSgGqkqriaiA 532 (1265)
|++||||+|+..|++. |++|||.++.. .....+..++ .. +....+ |+.... ...+.+||||||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~--~~---~l~~~l--gl~~~~~~~~p~eLSGGqqQRVAIA 154 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRA--AE---ELLEVL--GLEDRLLKKKPSELSGGQQQRVAIA 154 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHH--HH---HHHHhc--CChhhhccCCchhcCHHHHHHHHHH
Confidence 5679999999999987 99999996421 1111111111 11 111111 222122 255778999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhccCEEEEEeCCEEE
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRNADVIAVVQGRKIV 597 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~ 597 (1265)
|||+.+|+|++.||||++||.++.+.|++.+.++. .|+|+|+|||+......|||++.|++|++.
T Consensus 155 RAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 155 RALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999999884 389999999999999999999999999954
No 141
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-44 Score=394.21 Aligned_cols=227 Identities=47% Similarity=0.787 Sum_probs=208.7
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
+.|+++|++|+|++ ..++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 35899999999963 2358999999999999999999999999999999999999999999999999988888888999
Q ss_pred eeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000830 460 IGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNP 539 (1265)
Q Consensus 460 i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 539 (1265)
++|++|++.+|++|++||+.++.+....+++.++++..++.+++..+|.|+++..+....+||||||||++|||||+.+|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999886655566777777778888899999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 540 SILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 540 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
++|||||||++||+.+...+.+.|.++.+++|+|+|||+++.+..||+|++|++|++++.|+.+++..+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999988778999999999999988999999999999999988777543
No 142
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.1e-44 Score=413.60 Aligned_cols=223 Identities=31% Similarity=0.577 Sum_probs=186.1
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH---Hh
Q 000830 382 IEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW---LR 457 (1265)
Q Consensus 382 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 457 (1265)
|+++||+++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++..++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 246999999999999999999999999999999999999999999999999998887654 57
Q ss_pred hheeEEccCCcccc-ccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 458 QQIGLVNQEPALFA-TTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
++|+||||++.+|+ .|++||+.++.. ..+.++..+ +..++.+. + |+.......+.+||||||||++||||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~--~v~e~l~~---v--gL~~~~~~~~~~LSgGqkQRV~IARA 154 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR--KVTELLAL---V--GLGDKHDSYPSNLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHH---c--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 78999999999996 599999998642 122222211 11111121 1 23333455667899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCch
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNS 611 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 611 (1265)
|+.+|++||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|+|++.|++++++..+..
T Consensus 155 L~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~ 234 (343)
T TIGR02314 155 LASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKT 234 (343)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCc
Confidence 9999999999999999999999999999998753 8999999999999976 999999999999999999999876443
No 143
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=5.8e-44 Score=396.07 Aligned_cols=227 Identities=68% Similarity=1.030 Sum_probs=206.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
++++|++++|++..+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+....+++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997533356999999999999999999999999999999999999999999999999988777777788899
Q ss_pred EEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000830 462 LVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSI 541 (1265)
Q Consensus 462 ~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 541 (1265)
|++|++.+|+.|++||+.++.+....+++.+.++..++.+++..+|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999987655555666666777778888899999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 542 LLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 542 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 9999999999999999999999887778999999999999988999999999999999998888765
No 144
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-44 Score=374.07 Aligned_cols=226 Identities=32% Similarity=0.501 Sum_probs=185.4
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCC-hHHHhh
Q 000830 381 HIEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLD-LKWLRQ 458 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~r~ 458 (1265)
.++++|+++.|+... -.++|+||||+|.+||++||||+||||||||+++|+|+.+|++|+|.++|.++.... .+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997432 125899999999999999999999999999999999999999999999998775543 346778
Q ss_pred heeEEccCCc--cccc-cHHHHhccCCCC----CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 459 QIGLVNQEPA--LFAT-TIRENILYGKDD----ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 459 ~i~~v~Q~~~--lf~~-ti~~ni~~~~~~----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
.|.+|+|||. |-+- ||++-|.-+... ....++.++++..+ ||.. ....++.+|||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~Vg-------L~~~---~l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVG-------LPPS---FLDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcC-------CCHH---HHhcCchhcChhHHHHHHH
Confidence 8999999995 3333 888777543221 12233444444443 3332 2445677899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
||||.-+|++||||||||+||+..++.|++.+.++.+ +.|.|+|||+++.+.+ ||||+||++|+|+|.++-+++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 9999999999999999999999999999999998875 5699999999999988 999999999999999999999877
Q ss_pred CchHHHHH
Q 000830 609 PNSAYAAL 616 (1265)
Q Consensus 609 ~~~~~~~~ 616 (1265)
+...|.+.
T Consensus 233 ~~h~ytr~ 240 (252)
T COG1124 233 PSHPYTRE 240 (252)
T ss_pred CccHHHHH
Confidence 55666543
No 145
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2e-44 Score=387.39 Aligned_cols=213 Identities=36% Similarity=0.568 Sum_probs=192.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.++++|++|+|+ +.++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.|+.+++.+++-+++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 378999999997 34699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCC-CCcccHHHHhccCCCC-------C---CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1097 ALVQQEPA-LFATSIYENILYGKDG-------A---SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1097 ~~VpQdp~-LF~gTIreNl~~g~~~-------~---sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
+||||++. -|.-|++|=+.+|+-. . +.+.+.+|++..++.++.++. + ..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-------~----~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-------V----DELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-------c----cccChhHHHHH
Confidence 99999964 5667999999888421 1 223578889999998886542 2 35999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhh
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIK-NADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
.|||||.++|+||+||||||+||...+-.+++.+++..+ ++|+|+|.|+++... .||++++|++|+++..|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 999999999999999999999999999999999999873 689999999998865 59999999999999999999998
Q ss_pred h
Q 000830 1243 E 1243 (1265)
Q Consensus 1243 ~ 1243 (1265)
.
T Consensus 228 T 228 (258)
T COG1120 228 T 228 (258)
T ss_pred C
Confidence 6
No 146
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.8e-44 Score=401.00 Aligned_cols=218 Identities=37% Similarity=0.599 Sum_probs=197.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|.+. .+++|+||+|+.||.++|+|||||||||++++|.|+.+|++|+|.|||.|+.++++++ +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999742 1899999999999999999999999999999999999999999999999999998876 799
Q ss_pred EEEecCCCCCcc-cHHHHhccCCCC------CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPALFAT-SIYENILYGKDG------ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~~~------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
++|+|+..||.- ||+|||.|+... .-++++.++++..++..++++.| .+||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999975 999999998432 22567888888988888887776 579999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCC
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENED 1246 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1246 (1265)
||+++|++++||||.|+||++....+...|+++.+ +.|+|.|||+...++. +|||+||++|+|.+.|+|.|+.+++.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999999988754 5799999999999876 99999999999999999999998777
Q ss_pred cHHH
Q 000830 1247 GAYF 1250 (1265)
Q Consensus 1247 g~f~ 1250 (1265)
..|-
T Consensus 227 n~fV 230 (338)
T COG3839 227 NLFV 230 (338)
T ss_pred chhh
Confidence 6664
No 147
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.6e-44 Score=368.52 Aligned_cols=225 Identities=36% Similarity=0.591 Sum_probs=194.2
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHH---HH
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLK---SL 1092 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~l 1092 (1265)
..|++++|+++|.+ ..||+||||+|++||.+||+|+||||||||++++.|+..|++|+|+++|.|+.+++.+ .+
T Consensus 7 ~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 36999999999964 4699999999999999999999999999999999999999999999999999988754 56
Q ss_pred hcccEEEecCCCCCcc-cHHHHhccCCC---CCCHHHHH----HHHHHhchHHH-HHhCCCCccccccCCCCCCChhHHH
Q 000830 1093 RKHIALVQQEPALFAT-SIYENILYGKD---GASEGEVI----EAAKLANAHSF-ISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1093 R~~i~~VpQdp~LF~g-TIreNl~~g~~---~~sd~ei~----~al~~a~l~~~-i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
|+++|+++|+..||+. ||+||+.+.-. ..+++++. ..++.+|+..- .+.+| +.||||.+.
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~K 152 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRK 152 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHH
Confidence 9999999999999976 99999988532 33444433 33455555554 33333 579999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSS 1240 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1240 (1265)
|+|||||+.-+|+||++|||||+|||-+...+-+.|+++.+ +.|+++|||+++++.. ||||+++.+|+|+..|+++|
T Consensus 153 RvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~e 232 (263)
T COG1127 153 RVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEE 232 (263)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHH
Confidence 99999999999999999999999999999999999988764 7899999999999987 89999999999999999999
Q ss_pred hhhcCCcHHHHHHH
Q 000830 1241 LVENEDGAYFKLIN 1254 (1265)
Q Consensus 1241 Ll~~~~g~f~~l~~ 1254 (1265)
|.+..+-..++.++
T Consensus 233 l~~sd~P~v~qf~~ 246 (263)
T COG1127 233 LLASDDPWVRQFFN 246 (263)
T ss_pred HHhCCCHHHHHHhc
Confidence 99865555555554
No 148
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.3e-43 Score=388.55 Aligned_cols=220 Identities=44% Similarity=0.767 Sum_probs=202.9
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcc
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKH 1095 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 1095 (1265)
|.|+++|++++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 468999999999642 2458999999999999999999999999999999999999999999999999988887788899
Q ss_pred cEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000830 1096 IALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNP 1175 (1265)
Q Consensus 1096 i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p 1175 (1265)
++|+||+|.+|..|++||+.++....+.+++.++++..++.+..+.+|.|++|.+.+...+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998765444566788889999999999999999999999989999999999999999999999
Q ss_pred CEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEec
Q 000830 1176 EILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1176 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~G 1236 (1265)
++|||||||++||+++...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999987678999999999988779999999999998765
No 149
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2e-43 Score=387.29 Aligned_cols=220 Identities=35% Similarity=0.551 Sum_probs=203.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
+.++++|++++|+.. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 358999999999743 2469999999999999999999999999999999999999999999999999988888888999
Q ss_pred eeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000830 460 IGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNP 539 (1265)
Q Consensus 460 i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 539 (1265)
++|++|++.+|+.|++||+.+... ...+++.++++..++.+++..+|.|+++..++.+.+||||||||++|||||+.+|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987543 4567788888888888999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeC
Q 000830 540 SILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 540 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 601 (1265)
+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999998877899999999999998899999999999998875
No 150
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-44 Score=385.15 Aligned_cols=215 Identities=39% Similarity=0.664 Sum_probs=195.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccC-CCCHHHHhcc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIK-RLNLKSLRKH 1095 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~-~~~l~~lR~~ 1095 (1265)
.|+++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.++. +.+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999865 57999999999999999999999999999999999999999999999999998 4889999999
Q ss_pred cEEEecCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1096 IALVQQEP--ALFATSIYENILYGKD--GASEGE----VIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1096 i~~VpQdp--~LF~gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
+|+|+|+| .+|..||.+.++||.. ..+.+| +.++++.+++.++.+.. ..+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----------p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRP-----------PFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCC-----------ccccCCcceeeHHh
Confidence 99999999 7999999999999843 344444 56777777777764443 35799999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCC--ceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRK--RTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~--~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
|.+|..+|++||||||||+||+...+.+.+.++++.++ +|+|+|||+++.+.. |||++||++|+++.+|+|+++.++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999999999999998754 799999999999988 999999999999999999999874
No 151
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-41 Score=362.74 Aligned_cols=474 Identities=21% Similarity=0.264 Sum_probs=356.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccchhHHHHHHHhhHHHHHHHHHHHHHH
Q 000830 741 TILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDEMDNSSSILASRLESDATLLRTIVVDRSTI 820 (1265)
Q Consensus 741 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~ 820 (1265)
...++++.++..+.+.+........+++...++|+++.++++..|+.-+++ -+.++++.++++|+.++. +-...++.
T Consensus 51 l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier--~~~~rlla~L~~Dvr~IS-f~~s~lp~ 127 (546)
T COG4615 51 LPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER--LGSARLLAGLTSDVRNIS-FAFSRLPE 127 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH--hcccchhhhhccccccee-ehHhhhHH
Confidence 334455555556666777778889999999999999999999999999997 789999999999999998 66677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHhccHHH
Q 000830 821 LIQNFGLVTASFVIAFILNWRITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKANMLAAEAVSNIRTVAAFCSEDK 900 (1265)
Q Consensus 821 ~i~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~ 900 (1265)
+.+....+++++..+.++++++.+++...+.+.+...++......+.....++.......+.+..++|.+..+...-..+
T Consensus 128 ~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~ 207 (546)
T COG4615 128 LVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAE 207 (546)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHH
Confidence 99999999999999999999998887777777666666665555555555666677778888999999999887653332
Q ss_pred H--HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 901 V--LELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLA 978 (1265)
Q Consensus 901 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1265)
. .+.|...-+...+...+...........++.+.+...+..+|+..... +.+........+.+.+...++.+...
T Consensus 208 ~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~---w~st~~a~tivlvlLflr~pL~s~vg 284 (546)
T COG4615 208 YVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLG---WASTNVAATIVLVLLFLRTPLLSAVG 284 (546)
T ss_pred HHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhhHHHHHHHHHHHHhhHHHHHHh
Confidence 2 222322222222222222222223334555566666666666655442 22222333344455667778888899
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCCCcccCCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCC
Q 000830 979 LVPDLLKGNQMAASVFEVLDRKTQVIGDIGEELTNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSG 1058 (1265)
Q Consensus 979 ~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSG 1058 (1265)
..|.+..+.++.+++.++...++......+.+.|. -..|+++||.|+|+.. .--+..||++|++||.|=|+|.||||
T Consensus 285 ilP~l~~AqvA~~kiakle~~~~~a~~~~~q~~p~-~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsG 361 (546)
T COG4615 285 ILPTLLTAQVAFNKIAKLELAPYKADFPRPQAFPD-WKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSG 361 (546)
T ss_pred hhhHHHHHHHHHHHHHHhhcCCccccCCCCCcCCc-ccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCc
Confidence 99999999999999988765433322211222222 2469999999999743 13478899999999999999999999
Q ss_pred hHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcccHHHHhccCCCC-CCHHHHHHHHHHhchHH
Q 000830 1059 KSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATSIYENILYGKDG-ASEGEVIEAAKLANAHS 1137 (1265)
Q Consensus 1059 KSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~-~sd~ei~~al~~a~l~~ 1137 (1265)
|||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|+-|-+||+.++ |.+. ++++.+..-++...+..
T Consensus 362 KST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~ 435 (546)
T COG4615 362 KSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAH 435 (546)
T ss_pred HHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999998764 2222 67776665555444332
Q ss_pred HHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCc
Q 000830 1138 FISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRL 1215 (1265)
Q Consensus 1138 ~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl 1215 (1265)
.. ++.+|-=+ -..||-|||.|+|+--|++.+.||++|||=-+--||.=.+...+.+--.. .|||++.|||+-
T Consensus 436 kt-sl~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd 509 (546)
T COG4615 436 KT-SLNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDD 509 (546)
T ss_pred hh-cccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCc
Confidence 22 12222111 14699999999999999999999999999999999999998888775543 489999999999
Q ss_pred hhhhccCEEEEEeCCEEEEe
Q 000830 1216 STIKNADQISVIESGKIIEQ 1235 (1265)
Q Consensus 1216 ~ti~~~DrI~vl~~G~Ive~ 1235 (1265)
.-...|||++.|++|+++|.
T Consensus 510 ~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 510 HYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhhhhHHHHHHHhcCceeec
Confidence 99999999999999999985
No 152
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-43 Score=403.79 Aligned_cols=221 Identities=29% Similarity=0.499 Sum_probs=188.5
Q ss_pred ccEEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCC------
Q 000830 1016 GTIELRGVHFSYPSRP--EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRL------ 1087 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~------ 1087 (1265)
..|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3699999999997421 23689999999999999999999999999999999999999999999999998653
Q ss_pred ----------CHHHHhcccEEEecCC--CCCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHHhCCCCcc-ccccC
Q 000830 1088 ----------NLKSLRKHIALVQQEP--ALFATSIYENILYGKD--GASEGEVIEAAKLANAHSFISALPEGYS-TKVGE 1152 (1265)
Q Consensus 1088 ----------~l~~lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge 1152 (1265)
+...+|++++||+|+| .+|+.|++||+.++.. ..++++..+ . ..++++.+ |++ .....
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~---~--~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK---L--AKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH---H--HHHHHHHc--CCChhHhcC
Confidence 3567899999999998 6999999999987632 234433322 1 22444444 554 45677
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhh-ccCEEEEEeCC
Q 000830 1153 RGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIK-NADQISVIESG 1230 (1265)
Q Consensus 1153 ~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~-~~DrI~vl~~G 1230 (1265)
.+.+||||||||++|||||+++|+||||||||++||+.+++.+.+.|++.. +++|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 788999999999999999999999999999999999999999999998864 5789999999999875 59999999999
Q ss_pred EEEEecChhhhhh
Q 000830 1231 KIIEQGTHSSLVE 1243 (1265)
Q Consensus 1231 ~Ive~Gt~~eLl~ 1243 (1265)
++++.|+|+++.+
T Consensus 253 ~i~~~g~~~~~~~ 265 (320)
T PRK13631 253 KILKTGTPYEIFT 265 (320)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999998865
No 153
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-44 Score=385.05 Aligned_cols=215 Identities=37% Similarity=0.618 Sum_probs=190.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCC-CCChHHHhhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIK-GLDLKWLRQQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~-~~~~~~~r~~ 459 (1265)
.++++|++|+|+++ .++|+|+||+|++|+.++|+|+||||||||+++|.|+++|++|+|.++|.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 47899999999865 57999999999999999999999999999999999999999999999999988 4788999999
Q ss_pred eeEEccCC--ccccccHHHHhccCCCCC--CHHHH----HHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 460 IGLVNQEP--ALFATTIRENILYGKDDA--TMEEI----TRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 460 i~~v~Q~~--~lf~~ti~~ni~~~~~~~--~~~~~----~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
+|||+|+| .+|..||.|.++||..+. +.+++ .++++..++.+ .......+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~-----------~~~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEE-----------LLDRPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchh-----------hccCCccccCCcceeeHHh
Confidence 99999999 799999999999997543 33343 33344443332 2445667899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|.+|+.+|++||||||||+||+...+.+.+.++++.+ |+|+|++||+++.+.. ||++++|++|+++.+|++.++.++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999864 5899999999999987 999999999999999999888764
No 154
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-44 Score=365.61 Aligned_cols=222 Identities=35% Similarity=0.571 Sum_probs=195.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCC---HHHHh
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLN---LKSLR 1093 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~---l~~lR 1093 (1265)
.|+++||+.+||+ ...+|+||||+|++||.|||+||||||||||+++|.|+.+|++|+|.++|.++..+. +..+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 457999999999999999999999999999999999999999999999999998887 67789
Q ss_pred cccEEEecCCCCCcc-cHHHHhccCCCC-----------CC---HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCC
Q 000830 1094 KHIALVQQEPALFAT-SIYENILYGKDG-----------AS---EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLS 1158 (1265)
Q Consensus 1094 ~~i~~VpQdp~LF~g-TIreNl~~g~~~-----------~s---d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1158 (1265)
++||+|+|++.|-.. |+.+|+..|+-. .+ .....+|++++++.++.-+ +..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~q-----------ra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQ-----------RASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHH-----------HhccCC
Confidence 999999999998865 899999876421 22 2456788888888776543 446899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 000830 1159 GGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQ 1235 (1265)
Q Consensus 1159 gGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~ 1235 (1265)
|||+||++|||||..+|+|+|-|||+|+|||++.+.|++.|++.. .|.|+|+.-|.++..+. ||||+-|++|+|+-.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999875 47899999999999987 999999999999999
Q ss_pred cChhhhhhcCCcHHHHHHH
Q 000830 1236 GTHSSLVENEDGAYFKLIN 1254 (1265)
Q Consensus 1236 Gt~~eLl~~~~g~f~~l~~ 1254 (1265)
|+++||-+ ..+...|.
T Consensus 230 g~~~el~~---~~~~~iYg 245 (258)
T COG3638 230 GPASELTD---EALDEIYG 245 (258)
T ss_pred CChhhhhH---HHHHHHhc
Confidence 99999643 34444444
No 155
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=378.18 Aligned_cols=210 Identities=30% Similarity=0.551 Sum_probs=182.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++|+|.++ ++|+||||++++|++++|+||||||||||+|+|+|+.+|.+|+|.++|.+.+.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 58999999999743 49999999999999999999999999999999999999999999999987765432 4679
Q ss_pred eEEccCC---ccccccHHHHhccCCCCC----------CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHH
Q 000830 461 GLVNQEP---ALFATTIRENILYGKDDA----------TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQ 527 (1265)
Q Consensus 461 ~~v~Q~~---~lf~~ti~~ni~~~~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 527 (1265)
|||||.. |-|+-||+|-+.+|+... +.+++.+|++..++.++. +..+ .+|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-------~r~i----~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-------DRQI----GELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-------CCcc----cccCcHHHH
Confidence 9999964 678999999999985322 136778888888766543 2234 469999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC-CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 528 RIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV-GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 528 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
|+.|||||+++|++|+|||||+++|+.++..|.+.|+++++ |+||++|||+++.+.. +|+|+.| |++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhc
Confidence 99999999999999999999999999999999999999875 9999999999999865 9999999 5678899999998
Q ss_pred ccC
Q 000830 606 ISN 608 (1265)
Q Consensus 606 ~~~ 608 (1265)
...
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 764
No 156
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.3e-43 Score=388.12 Aligned_cols=219 Identities=53% Similarity=0.841 Sum_probs=200.6
Q ss_pred CcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHh
Q 000830 1014 VEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLR 1093 (1265)
Q Consensus 1014 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR 1093 (1265)
..|.|+++|++++|+++...++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45789999999999754234689999999999999999999999999999999999999999999999999888878888
Q ss_pred cccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000830 1094 KHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLK 1173 (1265)
Q Consensus 1094 ~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr 1173 (1265)
++++|+||+|.+|.+|++||+.++......+++++..+..++.++++.+|.|+++.+.+...+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999988655444556666667778899999999999999999999999999999999999999
Q ss_pred CCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEE
Q 000830 1174 NPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKI 1232 (1265)
Q Consensus 1174 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~I 1232 (1265)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999998777899999999999988999999999975
No 157
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.8e-44 Score=352.65 Aligned_cols=208 Identities=33% Similarity=0.542 Sum_probs=187.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHH---HHhc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLK---SLRK 1094 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR~ 1094 (1265)
|+|+||+.+|+.. .++|+||||+|++||.+-++|||||||||++++|+|...|++|+|.++|.|++.+.-+ .||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 8999999999865 5699999999999999999999999999999999999999999999999999887655 4899
Q ss_pred ccEEEecCCCCC-cccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1095 HIALVQQEPALF-ATSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1095 ~i~~VpQdp~LF-~gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
+||+|+||.-|. +-|+.||+++... ..+ .+.+.++++.+|+.+-...||. .|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHH
Confidence 999999999876 5699999998632 222 3567899999999999999984 699999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecCh
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTH 1238 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~ 1238 (1265)
|||++.+|++||-||||-+|||++...|++.+.+.- .|.||++.||+.+.+.. --|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999998875 48899999999999988 567999999999876544
No 158
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-43 Score=376.00 Aligned_cols=218 Identities=31% Similarity=0.539 Sum_probs=191.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++|++|+|.++ +||+||||+|++|+++||+||||||||||+++++|+.+|.+|+|.++|.++++... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 59999999999743 49999999999999999999999999999999999999999999999998876533 5789
Q ss_pred EEEecCC---CCCcccHHHHhccCCCC----------CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1097 ALVQQEP---ALFATSIYENILYGKDG----------ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1097 ~~VpQdp---~LF~gTIreNl~~g~~~----------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
|||||.. .-|.-||+|=+.+|... .+.+++.+|++.+++.++.. .++|+ |||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~-------r~i~~----LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRD-------RQIGE----LSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhC-------Ccccc----cCcHHHH
Confidence 9999955 45788999999887422 12488999999999998854 35664 9999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR-KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
|+.|||||+.+|++|+|||||+++|+.++..+.+.|+++.+ ||||++|+|+++.+.. ||+|+.| |++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhc
Confidence 99999999999999999999999999999999999999875 8999999999999987 9999999 5688999999999
Q ss_pred hhcCCcHHHHHHH
Q 000830 1242 VENEDGAYFKLIN 1254 (1265)
Q Consensus 1242 l~~~~g~f~~l~~ 1254 (1265)
+. ...+.+.+.
T Consensus 226 ~~--~~~l~~~~g 236 (254)
T COG1121 226 LT--EENLEKAFG 236 (254)
T ss_pred cC--HHHHHHHhC
Confidence 86 344555544
No 159
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=5.7e-43 Score=383.45 Aligned_cols=219 Identities=43% Similarity=0.726 Sum_probs=199.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
+++++|++++|++. ..++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 58999999999642 24589999999999999999999999999999999999999999999999998877777788899
Q ss_pred eEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000830 461 GLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPS 540 (1265)
Q Consensus 461 ~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~ 540 (1265)
+|++|++.+|+.|++||+.++.+....+++.+.++..++.+.+..+|.|++|.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998999999988755445566777788888888888999999999999999999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEee
Q 000830 541 ILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 541 illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 600 (1265)
+|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999886668999999999988779999999999998754
No 160
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.9e-43 Score=345.90 Aligned_cols=210 Identities=36% Similarity=0.583 Sum_probs=189.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|.+++|.|+|..-+ -.++++|++||+|||+||||||||||++++.||..|.+|+|.|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56889999997432 478999999999999999999999999999999999999999999999877664 46799
Q ss_pred EEecCCCCCcc-cHHHHhccCC-CC-----CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFAT-SIYENILYGK-DG-----ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~-~~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
+++||..||.- ||++|+.+|. |. ...+.+..++..+|+.+|.++||. .||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999964 9999999984 32 234678999999999999999984 699999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcC
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENE 1245 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~ 1245 (1265)
|+|+.+||+||||.|+|||.-...+...+.+... +.|+++|||.++.++. +|+++++++|||++.|+-+++++..
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 9999999999999999999999999998888764 5799999999999876 9999999999999999999998743
No 161
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-43 Score=370.87 Aligned_cols=197 Identities=37% Similarity=0.575 Sum_probs=176.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.+++++|+.+|++ ..||+|+||+|++||+|+|+||||||||||++++.|+.+|++|+|.++|.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4899999999974 5699999999999999999999999999999999999999999999999988543 4579
Q ss_pred EEEecCCCCCcc-cHHHHhccCCCCC------CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPALFAT-SIYENILYGKDGA------SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~~~~------sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
+||+|++.||.- |+++|+.++.... ..+...+.++.+|+.+|-+..| .+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHH
Confidence 999999999986 9999999875321 2346788889999999888777 479999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeC--CEE
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIES--GKI 1232 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~--G~I 1232 (1265)
||+.+|+||+||||.+|||+.|...+|+.+.+..+ ++||++|||++++... +|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 99999999999999999999999999999988764 5899999999999765 999999999 555
No 162
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-43 Score=389.97 Aligned_cols=217 Identities=38% Similarity=0.586 Sum_probs=185.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCH---HHHhc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNL---KSLRK 1094 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l---~~lR~ 1094 (1265)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 578999999963 358999999999999999999999999999999999999999999999999987764 56789
Q ss_pred ccEEEecCCCCCcc-cHHHHhccCCC---CCCHH----HHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000830 1095 HIALVQQEPALFAT-SIYENILYGKD---GASEG----EVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1095 ~i~~VpQdp~LF~g-TIreNl~~g~~---~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrla 1166 (1265)
+++||||++.+|.. |++||+.++.. ..+.+ ++.++++..++.++. .....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 99999999999986 99999987521 12332 344445555443332 2333579999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||||+++|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999886
Q ss_pred cCCcHH
Q 000830 1244 NEDGAY 1249 (1265)
Q Consensus 1244 ~~~g~f 1249 (1265)
....|
T Consensus 227 -~~~~~ 231 (235)
T cd03261 227 -SDDPL 231 (235)
T ss_pred -CCChh
Confidence 34444
No 163
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.1e-43 Score=388.72 Aligned_cols=212 Identities=37% Similarity=0.587 Sum_probs=184.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccC-----CCCCcEEEECCcccCCCC--HH
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFY-----DPTAGKVMVDGIDIKRLN--LK 1090 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~-----~p~~G~I~idG~di~~~~--l~ 1090 (1265)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++.+.+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999964 35899999999999999999999999999999999999 999999999999998776 56
Q ss_pred HHhcccEEEecCCCCCcccHHHHhccCCCC---CC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1091 SLRKHIALVQQEPALFATSIYENILYGKDG---AS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1091 ~lR~~i~~VpQdp~LF~gTIreNl~~g~~~---~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
.+|++++|+||++.+|..|++||+.++... .. ++++.++++..++.+.....++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 788999999999999988999999875321 11 2345666666666554433221 4679999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
|++|||||+++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999998766899999999999875 999999999999999998764
No 164
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-43 Score=402.01 Aligned_cols=222 Identities=27% Similarity=0.462 Sum_probs=187.7
Q ss_pred ccEEEEeEEEECCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCC------
Q 000830 380 GHIEFKDVSFCYPSRP--DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGL------ 451 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~------ 451 (1265)
..|+++|++|+|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3599999999997421 24699999999999999999999999999999999999999999999999998653
Q ss_pred ----------ChHHHhhheeEEccCC--ccccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCccccc-ccccC
Q 000830 452 ----------DLKWLRQQIGLVNQEP--ALFATTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFE-TQVGE 516 (1265)
Q Consensus 452 ----------~~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~ 516 (1265)
....+|++|+||+|+| .+|+.||+|||.++.. ..+.++..+ . +.+.+..+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~---~--~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK---L--AKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH---H--HHHHHHHc--CCChhHhcC
Confidence 3457889999999998 7999999999998742 223333221 1 12333333 343 45677
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhh-ccCEEEEEeCC
Q 000830 517 RGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIR-NADVIAVVQGR 594 (1265)
Q Consensus 517 ~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~~l~~G 594 (1265)
.+.+||||||||++|||||+++|+|||||||||+||+.++..+.+.|.++. +|+|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999998874 5899999999999875 59999999999
Q ss_pred EEEEeeCcchhccC
Q 000830 595 KIVKTGSHEELISN 608 (1265)
Q Consensus 595 ~i~~~g~~~~l~~~ 608 (1265)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999998765
No 165
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.7e-43 Score=367.72 Aligned_cols=207 Identities=39% Similarity=0.563 Sum_probs=174.4
Q ss_pred EEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH---H-
Q 000830 1018 IELRGVHFSYPSRPE-VVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS---L- 1092 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---l- 1092 (1265)
++++||+..|..... ..+|+++||+|++||.|||+||||||||||+++|.++-.|++|.|.++|.|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 679999999964322 46899999999999999999999999999999999999999999999999999988433 3
Q ss_pred hcccEEEecCCCCCcc-cHHHHhccCC--CCCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1093 RKHIALVQQEPALFAT-SIYENILYGK--DGAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1093 R~~i~~VpQdp~LF~g-TIreNl~~g~--~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
|++||+|+|+..|++. |++||+.++. ...+ .+...+.++.+++.+... .....+||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 5679999999998865 9999998531 1112 334445555556554433 123457999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEeCCEEEE
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIESGKIIE 1234 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive 1234 (1265)
||||||+.+|+|++.||||.+||++|.+.|.+.+++..+ ++|+|+|||+......|||++.|.||++.+
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999853 689999999999999999999999999543
No 166
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=8.6e-43 Score=383.54 Aligned_cols=220 Identities=50% Similarity=0.837 Sum_probs=197.6
Q ss_pred CCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH
Q 000830 377 KLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL 456 (1265)
Q Consensus 377 ~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~ 456 (1265)
...+.++++|++++|+++...++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+....
T Consensus 7 ~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 86 (226)
T cd03248 7 HLKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYL 86 (226)
T ss_pred CcCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHH
Confidence 34567999999999975333469999999999999999999999999999999999999999999999999887777778
Q ss_pred hhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 457 RQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 457 r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
++.++|++|++.+|+.|++||+.++.......++.+.+....+.+++..+|.|+++.+.+++.+||||||||++|||||+
T Consensus 87 ~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~ 166 (226)
T cd03248 87 HSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALI 166 (226)
T ss_pred HhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 88999999999999999999999876544445555555556677889999989999999999999999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEE
Q 000830 537 KNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKI 596 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i 596 (1265)
++|++|||||||++||+++...+.+.|+++.+++|+|++||+++.+..||+|++|++|++
T Consensus 167 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 167 RNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999988778999999999999988999999999974
No 167
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=375.98 Aligned_cols=222 Identities=33% Similarity=0.529 Sum_probs=180.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCe---eCCCCChHHHh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGN---NIKGLDLKWLR 457 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~---~~~~~~~~~~r 457 (1265)
.|+++|+++.|+. .++++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.+||+ |.++. ..-.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~--~~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNL--AVRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhcc--chhh
Confidence 4788999999974 45899999999999999999999999999999999999999999999999 55543 3334
Q ss_pred hheeEEccCCccccc-cHHHHhccCCCCC--CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 458 QQIGLVNQEPALFAT-TIRENILYGKDDA--TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~~-ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
++||+|+|+..||.. ||+|||+||.+-. ...+.....+..++.+.+ + ++-.-...+.+||||||||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lv-q----L~~la~ryP~QLSGGQrQRVALARA 151 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLV-Q----LEGLADRYPAQLSGGQRQRVALARA 151 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHh-c----ccchhhcCchhcChHHHHHHHHHHH
Confidence 679999999999975 9999999997311 111111112222222211 1 2222345678999999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCch
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNS 611 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 611 (1265)
|..+|++||||||+++||++-.+.+.+.|+++.+ |.|+++|||+.+++.. ||||++|++|+|...|+++|....|+.
T Consensus 152 LA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s 231 (345)
T COG1118 152 LAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPAS 231 (345)
T ss_pred hhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCc
Confidence 9999999999999999999999999999988753 8999999999998765 999999999999999999999877654
Q ss_pred H
Q 000830 612 A 612 (1265)
Q Consensus 612 ~ 612 (1265)
.
T Consensus 232 ~ 232 (345)
T COG1118 232 R 232 (345)
T ss_pred c
Confidence 3
No 168
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-43 Score=388.46 Aligned_cols=223 Identities=35% Similarity=0.529 Sum_probs=192.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC---CCCcEEEECCcccCCCCHHHHh
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD---PTAGKVMVDGIDIKRLNLKSLR 1093 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~~~l~~lR 1093 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.+.+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999963 358999999999999999999999999999999999985 6899999999999988888889
Q ss_pred cccEEEecCCCCCcccHHHHhccCCC--C------CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1094 KHIALVQQEPALFATSIYENILYGKD--G------ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1094 ~~i~~VpQdp~LF~gTIreNl~~g~~--~------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
++++|+||+|.+|..|++||+.++.. . ..++++.++++..++.+++.. ...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 99999999999999999999977521 1 112345666666666554432 23456678999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
+|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999998778999999999999875 999999999999999999999864
Q ss_pred CCcHH
Q 000830 1245 EDGAY 1249 (1265)
Q Consensus 1245 ~~g~f 1249 (1265)
+...+
T Consensus 232 ~~~~~ 236 (246)
T PRK14269 232 PKQEK 236 (246)
T ss_pred CCcHH
Confidence 43333
No 169
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-42 Score=393.51 Aligned_cols=217 Identities=31% Similarity=0.545 Sum_probs=190.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999742224589999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEecCC--CCCcccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1097 ALVQQEP--ALFATSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1097 ~~VpQdp--~LF~gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
+||||+| .++..|++|||.++.. ..+ ++.+.++++.+++.++.+..| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 3667899999987632 123 245677777777766654433 57999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhc
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998763 7899999999999988999999999999999999998763
No 170
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-43 Score=394.98 Aligned_cols=221 Identities=34% Similarity=0.557 Sum_probs=199.0
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcc
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKH 1095 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 1095 (1265)
..|+++||+.+|. +..+++|+||+|++||.+.++|||||||||++++|.||..|++|+|.+||.|+..++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3699999999997 45799999999999999999999999999999999999999999999999999998876 479
Q ss_pred cEEEecCCCCCc-ccHHHHhccCCC---CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1096 IALVQQEPALFA-TSIYENILYGKD---GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1096 i~~VpQdp~LF~-gTIreNl~~g~~---~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
|++|+|+..||. -||+||+.||.. ...+ +.+.++++.+++.++-.+.| .+|||||+||+||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHH
Confidence 999999999995 599999999853 1222 36789999999998877765 5799999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
||||..+|++||||||-||||.+-...++.-+++..+ |.|.|+|||+-+.... +|||+||++|+|...|+|+|+...
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 9999999999999999999999999999999988764 7899999999988654 999999999999999999999998
Q ss_pred CCcHHHHH
Q 000830 1245 EDGAYFKL 1252 (1265)
Q Consensus 1245 ~~g~f~~l 1252 (1265)
+...|-.-
T Consensus 228 P~~~fVA~ 235 (352)
T COG3842 228 PATRFVAD 235 (352)
T ss_pred cchHHHHH
Confidence 77776543
No 171
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2e-42 Score=375.08 Aligned_cols=206 Identities=34% Similarity=0.618 Sum_probs=184.2
Q ss_pred CCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHH
Q 000830 1013 NVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSL 1092 (1265)
Q Consensus 1013 ~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l 1092 (1265)
+..+.|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+
T Consensus 2 ~~~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 2 PEHGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 345679999999999742 2368999999999999999999999999999999999999999999999999988888889
Q ss_pred hcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000830 1093 RKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVL 1172 (1265)
Q Consensus 1093 R~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALl 1172 (1265)
|++++||||+|.+|++|++||+.+.. ..+++++.++++ +.+....|||||+||++||||++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~-~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~ 141 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFD-EYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALL 141 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccC-CCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999997643 234455444433 23456789999999999999999
Q ss_pred cCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecCh
Q 000830 1173 KNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTH 1238 (1265)
Q Consensus 1173 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~ 1238 (1265)
++|++|||||||++||+++...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 142 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 142 KRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999999998778999999999999988999999999999998874
No 172
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-42 Score=384.05 Aligned_cols=217 Identities=35% Similarity=0.548 Sum_probs=181.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh---HHHhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL---KWLRQ 458 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~ 458 (1265)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 359999999999999999999999999999999999999999999999999877664 56788
Q ss_pred heeEEccCCccccc-cHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 459 QIGLVNQEPALFAT-TIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
.|+||+|++.+|+. |++||+.++.. ..+.++..+.+ .+.+..+ |+.........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIV-----LEKLEAV--GLRGAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHH-----HHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999999986 99999987632 12222222111 1112222 23333445567899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|+.+|+||||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999988753 7999999999999876 999999999999999999988754
No 173
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-42 Score=401.77 Aligned_cols=219 Identities=33% Similarity=0.542 Sum_probs=192.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++ +.++|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999942 24689999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEecCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPALFA-TSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~LF~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
+||||++.+|. .|++||+.++.. ..+ .+++.++++..++.++..+.| .+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 599999998642 122 245667777778777666554 479999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCC
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENED 1246 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1246 (1265)
||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~ 227 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPA 227 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCc
Confidence 99999999999999999999999999999998764 6899999999998865 99999999999999999999988666
Q ss_pred cHHH
Q 000830 1247 GAYF 1250 (1265)
Q Consensus 1247 g~f~ 1250 (1265)
..|.
T Consensus 228 ~~~~ 231 (356)
T PRK11650 228 STFV 231 (356)
T ss_pred cHHH
Confidence 5554
No 174
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-42 Score=383.15 Aligned_cols=224 Identities=35% Similarity=0.566 Sum_probs=191.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3589999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEecCCCCCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000830 1097 ALVQQEPALFATSIYENILYGKD--GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKN 1174 (1265)
Q Consensus 1097 ~~VpQdp~LF~gTIreNl~~g~~--~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~ 1174 (1265)
+|+||+|.+|..|++||+.++.. ...++++.+.++..++.+ .........||||||||++||||++++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNK----------EYATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999987532 112334455555544421 122345568999999999999999999
Q ss_pred CCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCCcHHHH
Q 000830 1175 PEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENEDGAYFK 1251 (1265)
Q Consensus 1175 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~ 1251 (1265)
|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..++...|.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 999999999999999999999999998753 7899999999999876 9999999999999999999998754445655
Q ss_pred HH
Q 000830 1252 LI 1253 (1265)
Q Consensus 1252 l~ 1253 (1265)
.+
T Consensus 230 ~~ 231 (241)
T PRK14250 230 LF 231 (241)
T ss_pred HH
Confidence 44
No 175
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-42 Score=400.84 Aligned_cols=219 Identities=32% Similarity=0.548 Sum_probs=191.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+. .++++
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 6999999999963 458999999999999999999999999999999999999999999999999987664 46789
Q ss_pred EEEecCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPALFAT-SIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
+||+|++.+|.. |++||+.++.. ..+ ++++.++++..++.++.++. ...||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRY-----------VDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 999999999975 99999998632 122 34566777777776554443 3579999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCC
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENED 1246 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1246 (1265)
||+++|++||||||||+||+.+...+++.|++..+ ++|+|+|||+++.+.. ||+|+||++|+|++.|+|+++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998864 7899999999999865 99999999999999999999988666
Q ss_pred cHHHH
Q 000830 1247 GAYFK 1251 (1265)
Q Consensus 1247 g~f~~ 1251 (1265)
..|..
T Consensus 230 ~~~~a 234 (351)
T PRK11432 230 SRFMA 234 (351)
T ss_pred chHHH
Confidence 55543
No 176
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-42 Score=401.10 Aligned_cols=223 Identities=34% Similarity=0.578 Sum_probs=188.2
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH---Hh
Q 000830 1018 IELRGVHFSYPSRP-EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS---LR 1093 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---lR 1093 (1265)
|+++||+++|+... +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997321 346999999999999999999999999999999999999999999999999998877654 57
Q ss_pred cccEEEecCCCCCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000830 1094 KHIALVQQEPALFA-TSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1094 ~~i~~VpQdp~LF~-gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrla 1166 (1265)
++++||||++.+|. .|++||+.++.. ..+. +++.+.++..++.++ ......+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDK-----------ADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHHH
Confidence 89999999999986 699999987521 2222 234444444444333 33344679999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||||+++|+||||||||++||+.+...+++.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999987
Q ss_pred cCCcHHHH
Q 000830 1244 NEDGAYFK 1251 (1265)
Q Consensus 1244 ~~~g~f~~ 1251 (1265)
++...+.+
T Consensus 231 ~~~~~~~~ 238 (343)
T PRK11153 231 HPKHPLTR 238 (343)
T ss_pred CCCcHHHH
Confidence 54444443
No 177
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-42 Score=401.75 Aligned_cols=218 Identities=30% Similarity=0.506 Sum_probs=185.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999942 24599999999999999999999999999999999999999999999999999877654 4689
Q ss_pred eEEccCCccccc-cHHHHhccCCCC--CCHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDD--ATME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
|||+|++.+|+. ||+|||.|+... .+.. ++.++++..++ +........+||||||||++|||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL-----------~~~~~~~~~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILEL-----------EPLLDRKPRELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCC-----------hhHhhCChhhCCHHHHHHHHHHH
Confidence 999999999975 999999987532 1222 23333333333 33345556789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCc
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPN 610 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 610 (1265)
||+++|++||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~ 227 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPA 227 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCc
Confidence 99999999999999999999999999999988754 7999999999998865 99999999999999999999987654
Q ss_pred hHH
Q 000830 611 SAY 613 (1265)
Q Consensus 611 ~~~ 613 (1265)
..|
T Consensus 228 ~~~ 230 (356)
T PRK11650 228 STF 230 (356)
T ss_pred cHH
Confidence 333
No 178
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.7e-42 Score=381.45 Aligned_cols=210 Identities=37% Similarity=0.617 Sum_probs=177.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhcc-----CCCcceEEECCeeCCCCC--hH
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFY-----EPLSGEILLDGNNIKGLD--LK 454 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~-----~~~~G~i~~~g~~~~~~~--~~ 454 (1265)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999964 35999999999999999999999999999999999999 999999999999987766 56
Q ss_pred HHhhheeEEccCCccccccHHHHhccCCCCC---C----HHHHHHHHHHhcHHHHHhcCcccccccccCC--CCCCChHH
Q 000830 455 WLRQQIGLVNQEPALFATTIRENILYGKDDA---T----MEEITRAAKLSEAMSFISNLPERFETQVGER--GIQLSGGQ 525 (1265)
Q Consensus 455 ~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~--g~~LSgGq 525 (1265)
.+|++++|++|++.+|+.|++||+.++.... . .+++.++++..+ ++...... +.+|||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~~~LSgG~ 146 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAA-----------LWDEVKDRLHALGLSGGQ 146 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcC-----------CChHHhccCCcccCCHHH
Confidence 6788999999999999779999998763211 1 112222222222 22222233 47899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcch
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEE 604 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 604 (1265)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+.+|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 147 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 147 QQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 99999999999999999999999999999999999999988655899999999999865 99999999999999998876
Q ss_pred h
Q 000830 605 L 605 (1265)
Q Consensus 605 l 605 (1265)
+
T Consensus 227 ~ 227 (227)
T cd03260 227 I 227 (227)
T ss_pred C
Confidence 4
No 179
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-42 Score=386.30 Aligned_cols=226 Identities=31% Similarity=0.484 Sum_probs=191.6
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCC--CC
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKR--LN 1088 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~ 1088 (1265)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 36999999999963 3589999999999999999999999999999999999997 48999999999853 34
Q ss_pred HHHHhcccEEEecCCCCCcccHHHHhccCCC--C-CC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhH
Q 000830 1089 LKSLRKHIALVQQEPALFATSIYENILYGKD--G-AS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQ 1161 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~-~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1161 (1265)
...+|++++|+||++.+|..|++||+.++.. . .+ ++.+.++++.+++.+.+ ++.+++ ...+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHH
Confidence 5668899999999999999999999987531 1 11 23456666666654332 233444 456799999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSS 1240 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1240 (1265)
|||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|++++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778899999999999866 99999999999999999999
Q ss_pred hhhcCCcHHHH
Q 000830 1241 LVENEDGAYFK 1251 (1265)
Q Consensus 1241 Ll~~~~g~f~~ 1251 (1265)
+.+++...|.+
T Consensus 236 ~~~~~~~~~~~ 246 (254)
T PRK14273 236 LFFNPKNTKTE 246 (254)
T ss_pred HHhCCCChHHH
Confidence 98755555443
No 180
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-42 Score=400.61 Aligned_cols=217 Identities=32% Similarity=0.518 Sum_probs=185.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++ .+++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 5899999999963 458999999999999999999999999999999999999999999999999987654 35789
Q ss_pred eEEccCCccccc-cHHHHhccCCCC--CCHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDD--ATME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
+||+|++.+|+. ||+|||.|+... ...+ ++.++++..+ +.......+.+||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~g-----------l~~~~~r~~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVD-----------LAGFEDRYVDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcC-----------CchhhcCChhhCCHHHHHHHHHHH
Confidence 999999999976 999999997431 1222 2333333333 223345566789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCc
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPN 610 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 610 (1265)
||+.+|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++++.. ||+|++|++|+|++.|+++++..++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999988754 8999999999999855 99999999999999999999987755
Q ss_pred hHH
Q 000830 611 SAY 613 (1265)
Q Consensus 611 ~~~ 613 (1265)
..|
T Consensus 230 ~~~ 232 (351)
T PRK11432 230 SRF 232 (351)
T ss_pred chH
Confidence 433
No 181
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=8.7e-39 Score=377.10 Aligned_cols=470 Identities=17% Similarity=0.142 Sum_probs=344.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccccChhHH------HHHHHhhHHHHHHHH
Q 000830 103 YSLDFVYLSVAILFSSWIEVSCWMYTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEV------ISAITSDIIVVQDAL 176 (1265)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l------~srl~~D~~~i~~~~ 176 (1265)
....+..++.+..++...+.++......+.-.-+-..+.++.+....-|+.. ..|.+ =.|+..|+...-+..
T Consensus 88 ~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~--~~~~~~~~dNpDQRi~eDi~~~t~~t 165 (604)
T COG4178 88 QLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLA--QAGGIGLIDNPDQRIQEDIRNFTETT 165 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH--hcccccCCCChHHhHHHHHHHHHhhH
Confidence 3334444444444555556666665556666666666777777776333332 33422 379999998888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000830 177 SEKVGNFMHYISRFLGGFIIGFARVW---------------QISLVTLSIVPLIALAGGMYAYVTIGLIARVRKSYVKAG 241 (1265)
Q Consensus 177 ~~~~~~~~~~~~~~i~~~~~~~~~~~---------------~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (1265)
......++.++..++.-.+++..++- .+..++++.+++..++..++++.+.++.-+.++..++.-
T Consensus 166 ~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR 245 (604)
T COG4178 166 LDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFR 245 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHH
Confidence 66666666666655544444432211 223334445555556666788888888888888888888
Q ss_pred HHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHH
Q 000830 242 EIAEEVIGNVRTVQAFAGEDKAVKVYKEALSNTYKYGRKAGLAKGLGLGSMHCVLFLSWSLLVWYVSVVVHKHISNGGES 321 (1265)
Q Consensus 242 ~~~~E~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~ 321 (1265)
..+.-.-++...|-.|+.|+.+.++.++......+...+......-...+......++.++-+..++-....|.++.|.+
T Consensus 246 ~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~l 325 (604)
T COG4178 246 YSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGL 325 (604)
T ss_pred HHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHH
Confidence 88888888999999999999999888877766666555544433333333333333333333344455567888998888
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccc--c-cccc-cccCCCC---CCCcccEEEEeEEEECCCC
Q 000830 322 FTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDT--M-SKAS-SKTGRKL---DKLSGHIEFKDVSFCYPSR 394 (1265)
Q Consensus 322 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~--~-~~~~-~~~~~~~---~~~~~~i~~~~v~f~y~~~ 394 (1265)
+.....+.....+++.+...+..+..-++...|+.++-+.-. + .... ...+... ...+..|+++|++..-|+.
T Consensus 326 mqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~ 405 (604)
T COG4178 326 MQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC
Confidence 777666666667888888899999999999999998764321 0 0000 0000000 1114679999999998753
Q ss_pred CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccccH
Q 000830 395 PDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTI 474 (1265)
Q Consensus 395 ~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti 474 (1265)
...+++.||++++||.+-|.||||||||||++.|+|++|--+|+|..-.. ..+-|+||.|++-.||.
T Consensus 406 --~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~-----------~~~lflpQ~PY~p~GtL 472 (604)
T COG4178 406 --QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPAD-----------SALLFLPQRPYLPQGTL 472 (604)
T ss_pred --CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCC-----------CceEEecCCCCCCCccH
Confidence 36899999999999999999999999999999999999999999987621 35899999999999999
Q ss_pred HHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCC
Q 000830 475 RENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALD 552 (1265)
Q Consensus 475 ~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD 552 (1265)
||-|+|+... .+++++.+++.++++.++++++.+-.+ =...||||||||+|+||.|+++|++++|||+|||||
T Consensus 473 re~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALD 547 (604)
T COG4178 473 REALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALD 547 (604)
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccC
Confidence 9999998764 689999999999999999988754222 335699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEe
Q 000830 553 AESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQ 592 (1265)
Q Consensus 553 ~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~ 592 (1265)
+++|..+.+.+++...+.|+|-|+||.......++.+-+.
T Consensus 548 e~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 548 EETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred hHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 9999999999999888999999999998887776655553
No 182
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.7e-42 Score=399.63 Aligned_cols=207 Identities=34% Similarity=0.555 Sum_probs=181.9
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHH----hcccEEEecCCCCCc-
Q 000830 1033 VVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSL----RKHIALVQQEPALFA- 1107 (1265)
Q Consensus 1033 ~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l----R~~i~~VpQdp~LF~- 1107 (1265)
..+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|++||.|+...+...+ |++++||||++.+|+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999998887 789999999999997
Q ss_pred ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000830 1108 TSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLD 1181 (1265)
Q Consensus 1108 gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLD 1181 (1265)
.|++||+.++.. ..+ .+++.++++.+++.++..+. ..+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~-----------p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRY-----------PDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCC-----------hhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 599999987532 122 34566677777766554443 4579999999999999999999999999
Q ss_pred cCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCCcHHH
Q 000830 1182 EATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENEDGAYF 1250 (1265)
Q Consensus 1182 EaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~ 1250 (1265)
||||+||+.+.+.+++.+.+..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|+++++++...|.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 99999999999999999998753 7899999999998755 999999999999999999999876554444
No 183
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.5e-42 Score=399.71 Aligned_cols=218 Identities=33% Similarity=0.499 Sum_probs=188.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+.. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 3589999999999999999999999999999999999999999999999999877654 6789
Q ss_pred EEEecCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPALFA-TSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~LF~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
+||||++.+|. .|++||+.++.. ..+ ++.+.++++..++.++. .....+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSE-----------RKYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchh-----------hCChhhCCHHHHHHHHHHH
Confidence 99999999996 699999998632 122 23445555555554443 3445689999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCC
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENED 1246 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1246 (1265)
||+++|++||||||||+||+.+...+++.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++.
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~ 227 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPA 227 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998764 6899999999999865 99999999999999999999998666
Q ss_pred cHHH
Q 000830 1247 GAYF 1250 (1265)
Q Consensus 1247 g~f~ 1250 (1265)
..|.
T Consensus 228 ~~~~ 231 (353)
T TIGR03265 228 TPFV 231 (353)
T ss_pred CHHH
Confidence 5553
No 184
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.3e-42 Score=383.83 Aligned_cols=222 Identities=35% Similarity=0.555 Sum_probs=189.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC-----CcEEEECCcccCCC--CHH
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPT-----AGKVMVDGIDIKRL--NLK 1090 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~~--~l~ 1090 (1265)
|+++||+++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999973 35899999999999999999999999999999999999998 99999999998763 456
Q ss_pred HHhcccEEEecCCCCCcccHHHHhccCCC--C-CC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1091 SLRKHIALVQQEPALFATSIYENILYGKD--G-AS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1091 ~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~-~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
.+|++++|+||++.+|..|++||+.++.. . .+ ++++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 77899999999999999999999986421 1 12 234555666666653321 2233445689999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777899999999999875 9999999999999999999998
Q ss_pred hcCCcHH
Q 000830 1243 ENEDGAY 1249 (1265)
Q Consensus 1243 ~~~~g~f 1249 (1265)
++....+
T Consensus 232 ~~~~~~~ 238 (247)
T TIGR00972 232 TNPKEKR 238 (247)
T ss_pred hCCCChH
Confidence 6544444
No 185
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-42 Score=388.68 Aligned_cols=217 Identities=35% Similarity=0.576 Sum_probs=184.9
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCC--HHHHh
Q 000830 1018 IELRGVHFSYPSRP--EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLN--LKSLR 1093 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~--l~~lR 1093 (1265)
|+++||+++|+... ..++|+||||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997422 136999999999999999999999999999999999999999999999999998753 45788
Q ss_pred cccEEEecCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1094 KHIALVQQEP--ALFATSIYENILYGKD--GASEGE----VIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1094 ~~i~~VpQdp--~LF~gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
++++||||+| .+|+.|++||+.++.. ..+.++ +.++++.+++. +.+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5788999999987531 234333 44455554442 01223445568999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
+|||||+.+|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998763 7899999999999864 9999999999999999999987
Q ss_pred h
Q 000830 1243 E 1243 (1265)
Q Consensus 1243 ~ 1243 (1265)
+
T Consensus 234 ~ 234 (287)
T PRK13637 234 K 234 (287)
T ss_pred h
Confidence 5
No 186
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-42 Score=388.37 Aligned_cols=213 Identities=33% Similarity=0.566 Sum_probs=187.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 23589999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEecCC--CCCcccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1097 ALVQQEP--ALFATSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1097 ~~VpQdp--~LF~gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
+|+||+| .+|..|++||+.++.. ..+ ++++.++++.+++.++..+.| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 6888999999987531 122 245667777777766655443 37999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
|||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 99999999999999999999999999999999875 47899999999999865 9999999999999999987653
No 187
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-42 Score=384.87 Aligned_cols=226 Identities=32% Similarity=0.514 Sum_probs=192.3
Q ss_pred CcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCC--
Q 000830 1014 VEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKR-- 1086 (1265)
Q Consensus 1014 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~-- 1086 (1265)
..+.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++..
T Consensus 10 ~~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~ 86 (260)
T PRK10744 10 APSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPK 86 (260)
T ss_pred CCceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccc
Confidence 3567999999999963 358999999999999999999999999999999999986 589999999999863
Q ss_pred CCHHHHhcccEEEecCCCCCcccHHHHhccCCC---CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCCh
Q 000830 1087 LNLKSLRKHIALVQQEPALFATSIYENILYGKD---GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSG 1159 (1265)
Q Consensus 1087 ~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~---~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSg 1159 (1265)
.+...+|++++|+||+|.+|..|+++|+.++.. ..+. ++++++++.+++.+.+. ....+...+|||
T Consensus 87 ~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 159 (260)
T PRK10744 87 QDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSG 159 (260)
T ss_pred cchHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCH
Confidence 456678999999999999999999999987532 1222 34566666666543322 234455678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecCh
Q 000830 1160 GQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTH 1238 (1265)
Q Consensus 1160 GQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~ 1238 (1265)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 160 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (260)
T PRK10744 160 GQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNT 239 (260)
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998777899999999999865 999999999999999999
Q ss_pred hhhhhcCCcHH
Q 000830 1239 SSLVENEDGAY 1249 (1265)
Q Consensus 1239 ~eLl~~~~g~f 1249 (1265)
+++.+.....|
T Consensus 240 ~~~~~~~~~~~ 250 (260)
T PRK10744 240 DTIFTKPAKKQ 250 (260)
T ss_pred HHHHhCCCcHH
Confidence 99987443333
No 188
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.5e-42 Score=382.65 Aligned_cols=216 Identities=31% Similarity=0.561 Sum_probs=184.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHH-hccc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSL-RKHI 1096 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l-R~~i 1096 (1265)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 478999999963 358999999999999999999999999999999999999999999999999988776654 6789
Q ss_pred EEEecCCCCCcc-cHHHHhccCCCCC------------CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1097 ALVQQEPALFAT-SIYENILYGKDGA------------SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~~~~------------sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
+|+||++.+|.+ |++||+.++.... ..++.. ..+.++++.+ |++.........|||||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREAR-----ERAEELLERV--GLADLADRPAGELSYGQQR 150 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHH-----HHHHHHHHHc--CccchhhCChhhCCHHHHH
Confidence 999999999987 9999998753211 011111 1223444444 5555556666789999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
|++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 151 RLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 9999999999999999999999999999999999999876 57899999999999976 999999999999999999998
Q ss_pred hh
Q 000830 1242 VE 1243 (1265)
Q Consensus 1242 l~ 1243 (1265)
++
T Consensus 231 ~~ 232 (236)
T cd03219 231 RN 232 (236)
T ss_pred cc
Confidence 75
No 189
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.3e-42 Score=400.09 Aligned_cols=221 Identities=29% Similarity=0.488 Sum_probs=187.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.++. ++.|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 4589999999999999999999999999999999999999999999999999876653 5689
Q ss_pred eEEccCCccccc-cHHHHhccCCCCC--CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDDA--TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
+||+|++.+|+. ||+||+.|+.... +..+..+ .+.+.++.+ |++......+.+||||||||+||||||+.
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~ 151 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAE-----RVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALAT 151 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999975 9999999875321 1222111 112223333 34445567778999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCchHH
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNSAY 613 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 613 (1265)
+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|+++++..++...+
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~ 230 (353)
T TIGR03265 152 SPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPF 230 (353)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHH
Confidence 9999999999999999999999999988753 8999999999999765 99999999999999999999987755443
No 190
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-42 Score=384.87 Aligned_cols=220 Identities=33% Similarity=0.547 Sum_probs=188.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 1089 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 5999999999963 358999999999999999999999999999999999975 589999999999865 345
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD--GA-----SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|++++|+||++.+|..|++||+.++.. .. .++++.++++.+++.+.+. +.......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHHH
Confidence 678899999999999999999999986421 11 1345566666666654332 223455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 999999999999999999999
Q ss_pred hhcCC
Q 000830 1242 VENED 1246 (1265)
Q Consensus 1242 l~~~~ 1246 (1265)
.+...
T Consensus 236 ~~~~~ 240 (253)
T PRK14242 236 FTRPR 240 (253)
T ss_pred HcCCC
Confidence 86443
No 191
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.2e-38 Score=375.93 Aligned_cols=467 Identities=17% Similarity=0.155 Sum_probs=338.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccc-------cccchhHHHHHHHhhHHHHHHH
Q 000830 741 TILFCCAAVITVIVHAIEHLSFGIMGERLTLRVREKMFSAILSNEIGWFDE-------MDNSSSILASRLESDATLLRTI 813 (1265)
Q Consensus 741 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~-------~~~~~G~i~~r~s~D~~~i~~~ 813 (1265)
..+|.+++.+.++....+.++......++-.-+-+.+.++-+...-.|+.. .+|| =+|+..|+...-+.
T Consensus 89 l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNp----DQRi~eDi~~~t~~ 164 (604)
T COG4178 89 LQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNP----DQRIQEDIRNFTET 164 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCCh----HHhHHHHHHHHHhh
Confidence 456666666667777777777777777777777777777766666333321 1233 26888999888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----------H----HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 000830 814 VVDRSTILIQNFGLVTASFVIAFILNW-----------R----ITLVVVATYPLIISGHISEKLFFQGYGGNLSKAYLKA 878 (1265)
Q Consensus 814 ~~~~~~~~i~~~~~~~~~~~~~~~~~~-----------~----l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (1265)
..+....++.++.+++....++.-.+- . +.++++..+++.-.......+.+.+...+..+..+..
T Consensus 165 t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~f 244 (604)
T COG4178 165 TLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADF 244 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHH
Confidence 777777777777776666665552221 1 1112222222222222222333333333334444444
Q ss_pred HHHHHHHHhhhHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHH
Q 000830 879 NMLAAEAVSNIRTVAAFCSEDKVLELYSRELVEPSKRSFIRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKS 958 (1265)
Q Consensus 879 ~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 958 (1265)
.......-++.+.|-.++-|+...++..+..........+..........+......+...+-+..++-....|.++++.
T Consensus 245 R~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~ 324 (604)
T COG4178 245 RYSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGG 324 (604)
T ss_pred HHHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHH
Confidence 55666677888899999999877777666666655544444444444444444444455555555666677889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------cccCCCCccc---CCCcccEEEEeEEEECCC
Q 000830 959 VMKSFMVLIVTALAMGETLALVPDLLKGNQMAASVFEVLDRKT------QVIGDIGEEL---TNVEGTIELRGVHFSYPS 1029 (1265)
Q Consensus 959 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~------~~~~~~~~~~---~~~~g~I~~~~Vsf~Y~~ 1029 (1265)
++.+..++..+..+++......+.+..-.+...|+.++.+... +......... ......|+|+|++..-|+
T Consensus 325 lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~ 404 (604)
T COG4178 325 LMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPD 404 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCC
Confidence 9999888888888888888888888888888999887753221 1111100000 001467999999999885
Q ss_pred CCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCccc
Q 000830 1030 RPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFATS 1109 (1265)
Q Consensus 1030 ~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gT 1109 (1265)
. .+.+++++|+|+|||.+-|.|+||||||||+++|.|+++-.+|+|..-. -..+-|+||.|++-.||
T Consensus 405 ~--~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~Gt 471 (604)
T COG4178 405 G--QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGT 471 (604)
T ss_pred C--CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCcc
Confidence 4 3679999999999999999999999999999999999999999986631 13478999999999999
Q ss_pred HHHHhccCCCC--CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCC
Q 000830 1110 IYENILYGKDG--ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSAL 1187 (1265)
Q Consensus 1110 IreNl~~g~~~--~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaL 1187 (1265)
+||=|.|+... .+|+|+.+++.++++.++++++.+ ...-..-||+|||||||+||.|+++|++++||||||||
T Consensus 472 Lre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-----~~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsAL 546 (604)
T COG4178 472 LREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-----EDRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSAL 546 (604)
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-----cCcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhcc
Confidence 99999998643 899999999999999999999742 22245679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeC
Q 000830 1188 DVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIES 1229 (1265)
Q Consensus 1188 D~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~ 1229 (1265)
|+++|..+.+.+++..++.|+|.|+||.......++.+-+++
T Consensus 547 De~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 547 DEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred ChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 999999999999999999999999999888777777665543
No 192
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.7e-42 Score=399.68 Aligned_cols=206 Identities=35% Similarity=0.535 Sum_probs=178.5
Q ss_pred CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH----hhheeEEccCCccccc
Q 000830 397 VAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL----RQQIGLVNQEPALFAT 472 (1265)
Q Consensus 397 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~lf~~ 472 (1265)
+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+ |++|+||+|++++|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999988877 7789999999999985
Q ss_pred -cHHHHhccCCCCC--CH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEe
Q 000830 473 -TIRENILYGKDDA--TM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLD 545 (1265)
Q Consensus 473 -ti~~ni~~~~~~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlD 545 (1265)
||+|||.++.+.. +. +++.++++.. |++...+..+.+||||||||++|||||+.+|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~v-----------gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLV-----------GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc-----------CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999999874321 12 2233333333 3444566777899999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCchHH
Q 000830 546 EATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNSAY 613 (1265)
Q Consensus 546 E~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 613 (1265)
||||+||+.+...+++.+.++. .++|+|+|||+++++.. ||+|++|++|++++.|++++++.++...|
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 9999999999999999998874 38999999999998754 99999999999999999999987654444
No 193
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-42 Score=398.55 Aligned_cols=222 Identities=35% Similarity=0.590 Sum_probs=185.6
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH---Hh
Q 000830 382 IEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW---LR 457 (1265)
Q Consensus 382 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 457 (1265)
|+++|++|+|+... +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997311 346999999999999999999999999999999999999999999999999998877644 47
Q ss_pred hheeEEccCCcccc-ccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 458 QQIGLVNQEPALFA-TTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
++|+||+|++.+|+ .|++||+.++.. ..+.++..+ .+.+.+..+ |++........+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 88999999999987 599999987632 122222211 112223322 33444556677899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCc
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPN 610 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 610 (1265)
|+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 233 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPK 233 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 9999999999999999999999999999998753 7999999999999876 99999999999999999999976543
No 194
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-42 Score=379.41 Aligned_cols=213 Identities=34% Similarity=0.543 Sum_probs=181.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .+++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999964 458999999999999999999999999999999999999999999999999876543 367899
Q ss_pred EEecCCCCCc-ccHHHHhccCCCC--C----CH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000830 1098 LVQQEPALFA-TSIYENILYGKDG--A----SE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1098 ~VpQdp~LF~-gTIreNl~~g~~~--~----sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrla 1166 (1265)
|+||+|.+|. .|++||+.++... . +. +++.++++..++.++ ......+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWL-----------ADRYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHHHH
Confidence 9999999986 5999999875321 1 11 233444555554333 33344679999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||||+.+|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999998765 99999999999999999999976
Q ss_pred cCC
Q 000830 1244 NED 1246 (1265)
Q Consensus 1244 ~~~ 1246 (1265)
...
T Consensus 227 ~~~ 229 (239)
T cd03296 227 HPA 229 (239)
T ss_pred CCC
Confidence 433
No 195
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-42 Score=381.70 Aligned_cols=218 Identities=29% Similarity=0.481 Sum_probs=185.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC---CCcceEEECCeeCCCCChHHHh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE---PLSGEILLDGNNIKGLDLKWLR 457 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~~~~~~~~~~r 457 (1265)
.|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++...+....|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999973 358999999999999999999999999999999999985 6999999999999888777888
Q ss_pred hheeEEccCCccccccHHHHhccCCCCC----C----HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHH
Q 000830 458 QQIGLVNQEPALFATTIRENILYGKDDA----T----MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRI 529 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~~ti~~ni~~~~~~~----~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 529 (1265)
++|+|++|++.+|+.|++||+.++.... . .+++.++++..+ ++..+.+...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVG-------LFEEVKDKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcC-------CChhhhHHhcCCcccCCHHHHHHH
Confidence 9999999999999999999998763110 0 111222222222 222222345667789999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 530 AISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 530 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
+|||||+++|++|||||||++||+.+...+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999988779999999999998865 999999999999999999998764
No 196
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-42 Score=387.94 Aligned_cols=217 Identities=29% Similarity=0.516 Sum_probs=185.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.++++||+++|++....++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743224599999999999999999999999999999999999999999999999999887888888999
Q ss_pred eEEccCCc--cccccHHHHhccCCCC--CCHHH----HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 461 GLVNQEPA--LFATTIRENILYGKDD--ATMEE----ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 461 ~~v~Q~~~--lf~~ti~~ni~~~~~~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
+||+|+|. ++..||+|||.++... .+.++ +.++++..+ ++........+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~g-----------L~~~~~~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVG-----------MQDFKEREPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCC-----------CHhHhhCCcccCCHHHHHHHHHH
Confidence 99999984 5567999999987432 22222 233333333 23334455678999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|+|||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 8999999999999878999999999999999999887654
No 197
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.4e-42 Score=381.57 Aligned_cols=222 Identities=27% Similarity=0.503 Sum_probs=184.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH-hhhe
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL-RQQI 460 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 460 (1265)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 359999999999999999999999999999999999999999999999999988776554 5679
Q ss_pred eEEccCCccccc-cHHHHhccCCCCCCHHHH-------HHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDDATMEEI-------TRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~~~~~~~-------~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
+|++|++.+|++ |++||+.++........+ ........+.+.++.+ |++........+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999987 999999876432110000 0001111223334443 455556777789999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 99999999999999999999999999999998875 58999999999999866 999999999999999999887653
No 198
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-42 Score=387.44 Aligned_cols=219 Identities=35% Similarity=0.582 Sum_probs=185.7
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCC----CHHH
Q 000830 1018 IELRGVHFSYPSRP--EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRL----NLKS 1091 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~l~~ 1091 (1265)
|+++||+++|++.+ ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997432 13699999999999999999999999999999999999999999999999999653 3467
Q ss_pred HhcccEEEecCC--CCCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHHhCCCCccc-cccCCCCCCChhHHHHHH
Q 000830 1092 LRKHIALVQQEP--ALFATSIYENILYGKD--GASEGEVIEAAKLANAHSFISALPEGYST-KVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1092 lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~sd~ei~~al~~a~l~~~i~~lp~Gldt-~vge~G~~LSgGQkQrla 1166 (1265)
+|++|+||||+| .+|..|++|||.++.. ..+.++..+. +.+.++.+ |+++ .......+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 899999999998 5888999999987532 2333333222 12333333 5653 344567889999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||||+.+|+||||||||++||+.+...+++.|+++. .++|+|+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999875 37899999999999864 99999999999999999999876
No 199
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-42 Score=381.32 Aligned_cols=213 Identities=36% Similarity=0.596 Sum_probs=182.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCC---HHHHhc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLN---LKSLRK 1094 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~---l~~lR~ 1094 (1265)
|+++||+++|++ +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999964 145899999999999999999999999999999999999999999999999998876 456889
Q ss_pred ccEEEecCCCCCc-ccHHHHhccCCCC-----------CC---HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCCh
Q 000830 1095 HIALVQQEPALFA-TSIYENILYGKDG-----------AS---EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSG 1159 (1265)
Q Consensus 1095 ~i~~VpQdp~LF~-gTIreNl~~g~~~-----------~s---d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSg 1159 (1265)
+++|+||++.+|. .|++||+.++... .+ ++++.++++..++ +......+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGL-----------LDKAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCC-----------hhhhCCCcccCCH
Confidence 9999999999886 6999999764211 11 2233444444443 3334445678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1160 GQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1160 GQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
|||||++|||||+++|+||||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 37899999999999985 9999999999999999
Q ss_pred Chhhhhh
Q 000830 1237 THSSLVE 1243 (1265)
Q Consensus 1237 t~~eLl~ 1243 (1265)
+++++.+
T Consensus 228 ~~~~~~~ 234 (241)
T cd03256 228 PPAELTD 234 (241)
T ss_pred CHHHhhH
Confidence 9998743
No 200
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-42 Score=388.45 Aligned_cols=216 Identities=31% Similarity=0.530 Sum_probs=183.4
Q ss_pred EEEEeEEEECCCCCC--cccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCC----CCHHH
Q 000830 1018 IELRGVHFSYPSRPE--VVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKR----LNLKS 1091 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~--~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----~~l~~ 1091 (1265)
|+++||+|+|+.... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999974321 358999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcccEEEecCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1092 LRKHIALVQQEP--ALFATSIYENILYGKD--GASEGE----VIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1092 lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
+|++++||+|+| .+|..|+.||+.++.. ..+.++ +.++++.+++.+ ........+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~----------~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLAD----------EFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhccCCcccCCHHHHH
Confidence 899999999998 7999999999987632 223333 344444444421 1223445689999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998875 47899999999999864 999999999999999999998
Q ss_pred hh
Q 000830 1242 VE 1243 (1265)
Q Consensus 1242 l~ 1243 (1265)
..
T Consensus 232 ~~ 233 (288)
T PRK13643 232 FQ 233 (288)
T ss_pred Hc
Confidence 75
No 201
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.5e-42 Score=396.27 Aligned_cols=218 Identities=32% Similarity=0.531 Sum_probs=188.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|++||.++...+. .|+++
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3889999999964 358999999999999999999999999999999999999999999999999987654 46789
Q ss_pred EEEecCCCCCcc-cHHHHhccCCC------CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1097 ALVQQEPALFAT-SIYENILYGKD------GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~~------~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
+||||++.+|.. |++||+.++.. ..+ ++++.++++..++.++.++ ....||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADR-----------YPAQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHH
Confidence 999999999974 99999988632 122 2345556666666544433 3357999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
+|||||+++|++||||||||+||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|+|++.|+++++.
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999998764 6899999999999776 9999999999999999999998
Q ss_pred hcCCcHHH
Q 000830 1243 ENEDGAYF 1250 (1265)
Q Consensus 1243 ~~~~g~f~ 1250 (1265)
+++...|.
T Consensus 226 ~~p~~~~~ 233 (353)
T PRK10851 226 REPATRFV 233 (353)
T ss_pred hCccchHH
Confidence 86555443
No 202
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.6e-42 Score=376.32 Aligned_cols=211 Identities=27% Similarity=0.469 Sum_probs=180.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++||+++|++. +.++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999742 146899999999999999999999999999999999999999999999999987643 56788999
Q ss_pred EEecCCCCC-cccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALF-ATSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF-~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||++.+| ..|+++|+.++.. ..+. +++.++++..++.+.. ++ ...+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~----~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------NK----RARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------hC----hhhhCCHHHHHHHHHHHH
Confidence 999999998 5799999976421 1222 2344555555543332 23 335799999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999998778999999999999976 999999999999999999875
No 203
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-42 Score=386.21 Aligned_cols=215 Identities=32% Similarity=0.568 Sum_probs=190.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+++.+
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999642 24589999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEecCC--CCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1097 ALVQQEP--ALFATSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1097 ~~VpQdp--~LF~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
+|+||+| .+++.|++|||.++.. ..+. +++.++++..++.+++...| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 4667899999987521 1222 34666777777766655544 47999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhh
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999999998764 789999999999998899999999999999999999876
No 204
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=7.3e-42 Score=399.11 Aligned_cols=222 Identities=26% Similarity=0.468 Sum_probs=195.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.+++...+|+++
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999963 4689999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCC-CcccHHHHhccCCCC----------CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1097 ALVQQEPAL-FATSIYENILYGKDG----------ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1097 ~~VpQdp~L-F~gTIreNl~~g~~~----------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
+||||++.+ |+.|++||+.++... .+.+.+.++++.+++.++.++ ...+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHH
Confidence 999999987 678999999876421 123457788888888766533 2357999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
+|||||+++|+||||||||++||+.+...+++.|+++. +++|+|+++|+++.+.. ||||++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999986 47899999999999965 99999999999999999999986
Q ss_pred cCCcHHHHHHH
Q 000830 1244 NEDGAYFKLIN 1254 (1265)
Q Consensus 1244 ~~~g~f~~l~~ 1254 (1265)
.....+++.
T Consensus 229 --~~~l~~~~~ 237 (402)
T PRK09536 229 --ADTLRAAFD 237 (402)
T ss_pred --cHHHHHHhC
Confidence 334555543
No 205
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=384.98 Aligned_cols=216 Identities=31% Similarity=0.524 Sum_probs=189.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334689999999999999999999999999999999999999999999999999887888889999
Q ss_pred EEEecCC--CCCcccHHHHhccCCC--CCCHH----HHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1097 ALVQQEP--ALFATSIYENILYGKD--GASEG----EVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1097 ~~VpQdp--~LF~gTIreNl~~g~~--~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
+|+||+| .++..|+.|||.++.. ..+++ .+.++++.+++.++... ....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 9999998 4778899999986521 23333 34566666666555433 3357999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhh
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFA 229 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999998864 789999999999998899999999999999999999876
No 206
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-42 Score=388.42 Aligned_cols=221 Identities=25% Similarity=0.499 Sum_probs=183.1
Q ss_pred EEEEeEEEECCCCCC--CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCC----CChHH
Q 000830 382 IEFKDVSFCYPSRPD--VAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKG----LDLKW 455 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~ 455 (1265)
|+++||+|+|+.... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999974221 359999999999999999999999999999999999999999999999999853 33567
Q ss_pred HhhheeEEccCC--ccccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 456 LRQQIGLVNQEP--ALFATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 456 ~r~~i~~v~Q~~--~lf~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
+|++++||+|+| .+|..|+.||+.|+... .+.++..+ +..++.+.+ .++ +......+.+||||||||++|
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~-~L~---~~~~~~~~~~LSgGqkqrvai 155 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK--IAAEKLEMV-GLA---DEFWEKSPFELSGGQMRRVAI 155 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH--HHHHHHHHc-CCC---hhhccCCcccCCHHHHHHHHH
Confidence 888999999998 78989999999987432 22333221 111111211 221 123456678999999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhh-ccCEEEEEeCCEEEEeeCcchhccC
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIR-NADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+. .||+|++|++|++++.|+++++..+
T Consensus 156 A~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 156 AGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998875 4899999999999885 4999999999999999999998654
No 207
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-42 Score=386.68 Aligned_cols=219 Identities=37% Similarity=0.588 Sum_probs=185.5
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHH----hc
Q 000830 1019 ELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSL----RK 1094 (1265)
Q Consensus 1019 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l----R~ 1094 (1265)
.++||+++|.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 45677777753 358999999999999999999999999999999999999999999999999988765543 46
Q ss_pred ccEEEecCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1095 HIALVQQEPALFA-TSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1095 ~i~~VpQdp~LF~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
+++|+||++.+|. .|++||+.++.. ... ++++.++++..++.++....| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 8999999999885 699999976421 111 234566677777766555443 4799999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++++++
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999998753 7899999999999865 999999999999999999999875
Q ss_pred CCcHHHH
Q 000830 1245 EDGAYFK 1251 (1265)
Q Consensus 1245 ~~g~f~~ 1251 (1265)
....|.+
T Consensus 252 ~~~~~~~ 258 (269)
T cd03294 252 PANDYVR 258 (269)
T ss_pred cCcHHHH
Confidence 5555554
No 208
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-42 Score=383.60 Aligned_cols=224 Identities=33% Similarity=0.521 Sum_probs=191.1
Q ss_pred CcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCC--
Q 000830 1014 VEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKR-- 1086 (1265)
Q Consensus 1014 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~-- 1086 (1265)
..+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++..
T Consensus 16 ~~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~ 92 (267)
T PRK14235 16 TEIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPR 92 (267)
T ss_pred CCceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccc
Confidence 3568999999999963 3589999999999999999999999999999999999975 89999999999865
Q ss_pred CCHHHHhcccEEEecCCCCCcccHHHHhccCCC--CC--C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCC
Q 000830 1087 LNLKSLRKHIALVQQEPALFATSIYENILYGKD--GA--S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLS 1158 (1265)
Q Consensus 1087 ~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~--s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1158 (1265)
.+...+|++++|+||+|.+|..|++||+.++.. .. + ++++.++++..++.+++. ......+.+||
T Consensus 93 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 165 (267)
T PRK14235 93 LDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLS 165 (267)
T ss_pred cchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCC
Confidence 345678899999999999998999999986421 11 1 234566666666654332 12344566899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 000830 1159 GGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGT 1237 (1265)
Q Consensus 1159 gGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt 1237 (1265)
||||||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 166 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 166 GGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998777899999999999965 99999999999999999
Q ss_pred hhhhhhcCCc
Q 000830 1238 HSSLVENEDG 1247 (1265)
Q Consensus 1238 ~~eLl~~~~g 1247 (1265)
+++++.+...
T Consensus 246 ~~~~~~~~~~ 255 (267)
T PRK14235 246 TEKMFTNPDD 255 (267)
T ss_pred HHHHHhCCCC
Confidence 9999864443
No 209
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6.7e-42 Score=375.69 Aligned_cols=217 Identities=28% Similarity=0.452 Sum_probs=180.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHH-hccc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSL-RKHI 1096 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l-R~~i 1096 (1265)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 358999999999999999999999999999999999999999999999999988776654 6789
Q ss_pred EEEecCCCCCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000830 1097 ALVQQEPALFAT-SIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNP 1175 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p 1175 (1265)
+|+||++.+|.+ |++||+.++.......+..+.+ .+.++.++ +++........+||||||||++|||||+++|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARL-----ERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHH-----HHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999998753322111111111 11122221 1223334455679999999999999999999
Q ss_pred CEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1176 EILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1176 ~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
++|||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999876 47899999999999866 99999999999999999988764
No 210
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-42 Score=382.74 Aligned_cols=225 Identities=31% Similarity=0.461 Sum_probs=188.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccC--CCCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIK--RLNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~--~~~l 1089 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999964 3589999999999999999999999999999999999987 4999999999997 4556
Q ss_pred HHHhcccEEEecCCCCCcc-cHHHHhccCCC--C--CCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChh
Q 000830 1090 KSLRKHIALVQQEPALFAT-SIYENILYGKD--G--ASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGG 1160 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~g-TIreNl~~g~~--~--~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1160 (1265)
..+|++++|+||++.+|.+ |++||+.++.. . .+. +++.++++..++.+.+. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 6788999999999999976 99999976421 1 122 34455565555543322 1234455689999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChh
Q 000830 1161 QKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHS 1239 (1265)
Q Consensus 1161 QkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1239 (1265)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777999999999999876 9999999999999999999
Q ss_pred hhhhcCCcHHHH
Q 000830 1240 SLVENEDGAYFK 1251 (1265)
Q Consensus 1240 eLl~~~~g~f~~ 1251 (1265)
+++++....|.+
T Consensus 234 ~~~~~~~~~~~~ 245 (253)
T PRK14267 234 KVFENPEHELTE 245 (253)
T ss_pred HHHhCCCcHHHH
Confidence 998644333433
No 211
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.8e-42 Score=375.64 Aligned_cols=203 Identities=34% Similarity=0.581 Sum_probs=174.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHH---HHhc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLK---SLRK 1094 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR~ 1094 (1265)
|+++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999642 23589999999999999999999999999999999999999999999999999776543 4788
Q ss_pred ccEEEecCCCCCc-ccHHHHhccCCC--C----CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1095 HIALVQQEPALFA-TSIYENILYGKD--G----ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1095 ~i~~VpQdp~LF~-gTIreNl~~g~~--~----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
+++|+||+|.+|. .|++||+.++.. . ..++++.++++..++.++....| .+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999886 599999986421 1 12345667777777665544433 4799999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEE
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKI 1232 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~I 1232 (1265)
||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875 47899999999999976 999999999975
No 212
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-42 Score=377.62 Aligned_cols=215 Identities=36% Similarity=0.586 Sum_probs=183.5
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHH---HHh
Q 000830 1018 IELRGVHFSYPSRP-EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLK---SLR 1093 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR 1093 (1265)
|+++|++++|+++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999997431 12689999999999999999999999999999999999999999999999999877654 357
Q ss_pred cccEEEecCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000830 1094 KHIALVQQEPALFA-TSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1094 ~~i~~VpQdp~LF~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrla 1166 (1265)
++++|+||+|.+|. .|++||+.++.. ..+ .+++.++++..++.+.. .....+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKA-----------DAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hcChhhCCHHHHHHHH
Confidence 89999999999997 699999976421 112 23445555555554443 3344679999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
||||++++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||++++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999998875
No 213
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-42 Score=386.94 Aligned_cols=220 Identities=30% Similarity=0.527 Sum_probs=183.7
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCC--hHHHh
Q 000830 382 IEFKDVSFCYPSRP--DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLD--LKWLR 457 (1265)
Q Consensus 382 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--~~~~r 457 (1265)
|+++||+|+|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997422 146999999999999999999999999999999999999999999999999997654 45678
Q ss_pred hheeEEccCC--ccccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCccccc--ccccCCCCCCChHHHHHHHH
Q 000830 458 QQIGLVNQEP--ALFATTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFE--TQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 458 ~~i~~v~Q~~--~lf~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~--t~~~~~g~~LSgGqkqriai 531 (1265)
++||||||+| .+|+.|++|||.++.. ..+.++..+.+. +.+..+ |++ +.....+.+||||||||++|
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~i 155 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVK-----RAMNIV--GLDYEDYKDKSPFELSGGQKRRVAI 155 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHH-----HHHHHc--CCCchhhccCCcccCCHHHHHHHHH
Confidence 8999999998 5788999999998642 123333322211 112221 222 34566778999999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-ccCEEEEEeCCEEEEeeCcchhccC
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIR-NADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
||||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|+|||+++.+. .||+|++|++|++++.|+.+++.+.
T Consensus 156 AraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 156 AGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999998753 899999999999985 5999999999999999999888654
No 214
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.3e-41 Score=395.40 Aligned_cols=218 Identities=37% Similarity=0.616 Sum_probs=192.1
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcc
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKH 1095 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 1095 (1265)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+.. +++
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRH 87 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 35999999999963 3589999999999999999999999999999999999999999999999999877654 578
Q ss_pred cEEEecCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1096 IALVQQEPALFAT-SIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1096 i~~VpQdp~LF~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
++||+|++.||.. |++|||.++.. ..+ ++++.++++..++.++.++.| .+||||||||++||
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLA 156 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIA 156 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHH
Confidence 9999999999965 99999988642 122 235667777777777666555 47999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcC
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENE 1245 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~ 1245 (1265)
|||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+|+++.+++
T Consensus 157 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 157 RAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 999999999999999999999999999999999764 7899999999999765 9999999999999999999998866
Q ss_pred CcHH
Q 000830 1246 DGAY 1249 (1265)
Q Consensus 1246 ~g~f 1249 (1265)
...|
T Consensus 237 ~~~~ 240 (375)
T PRK09452 237 KNLF 240 (375)
T ss_pred ccHH
Confidence 6555
No 215
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5.2e-41 Score=377.07 Aligned_cols=222 Identities=30% Similarity=0.488 Sum_probs=197.0
Q ss_pred CCCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH
Q 000830 1012 TNVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS 1091 (1265)
Q Consensus 1012 ~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~ 1091 (1265)
+...+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 34 ~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g---------- 98 (282)
T cd03291 34 SSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG---------- 98 (282)
T ss_pred CCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC----------
Confidence 3445679999999952 3589999999999999999999999999999999999999999999998
Q ss_pred HhcccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000830 1092 LRKHIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAV 1171 (1265)
Q Consensus 1092 lR~~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARAL 1171 (1265)
+++|+||++.+|++|++||+.++.. ..+.++.++++..++.+.+..+|.++++.+++.+.+||||||||++|||||
T Consensus 99 ---~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL 174 (282)
T cd03291 99 ---RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAV 174 (282)
T ss_pred ---EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHH
Confidence 4999999999999999999987532 234456677788888999999999999999999999999999999999999
Q ss_pred ccCCCEEEEecCcCCCCHHHHHHHHHHH-HHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhcCCcHHH
Q 000830 1172 LKNPEILLLDEATSALDVESERVVQQAL-QRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVENEDGAYF 1250 (1265)
Q Consensus 1172 lr~p~ILlLDEaTSaLD~~te~~I~~~l-~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~ 1250 (1265)
+++|++|||||||++||+++...+.+.+ ++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+ ....|.
T Consensus 175 ~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~-~~~~~~ 253 (282)
T cd03291 175 YKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQS-LRPDFS 253 (282)
T ss_pred hcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHh-cchHHH
Confidence 9999999999999999999999888754 55556899999999999998899999999999999999999986 345565
Q ss_pred HHH
Q 000830 1251 KLI 1253 (1265)
Q Consensus 1251 ~l~ 1253 (1265)
+.+
T Consensus 254 ~~~ 256 (282)
T cd03291 254 SKL 256 (282)
T ss_pred HHH
Confidence 554
No 216
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.3e-42 Score=397.39 Aligned_cols=218 Identities=33% Similarity=0.527 Sum_probs=185.3
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
..++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...++. +++
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRH 87 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 35999999999963 3589999999999999999999999999999999999999999999999999876654 467
Q ss_pred eeEEccCCccccc-cHHHHhccCCCC--CCHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDD--ATME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
|+||+|++.||+. ||+|||.|+... .+.. ++.++++..++ +........+||||||||++||
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~p~~LSgGq~QRVaLA 156 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQL-----------EEFAQRKPHQLSGGQQQRVAIA 156 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCC-----------chhhhCChhhCCHHHHHHHHHH
Confidence 9999999999976 999999987531 1222 23333333333 3334455678999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCC
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNP 609 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 609 (1265)
|||+.+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|+|++.|++++++.++
T Consensus 157 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 157 RAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 999999999999999999999999999999988753 8999999999998765 9999999999999999999998775
Q ss_pred chHH
Q 000830 610 NSAY 613 (1265)
Q Consensus 610 ~~~~ 613 (1265)
...|
T Consensus 237 ~~~~ 240 (375)
T PRK09452 237 KNLF 240 (375)
T ss_pred ccHH
Confidence 4333
No 217
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-41 Score=376.28 Aligned_cols=221 Identities=33% Similarity=0.564 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.++++|++|+|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4889999999963 3589999999999999999999999999999999999999999999999999877777888899
Q ss_pred eEEccCCccccccHHHHhccCCCCCC--HHHHHHHHHHhcHHHHHhcCccccc-ccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 461 GLVNQEPALFATTIRENILYGKDDAT--MEEITRAAKLSEAMSFISNLPERFE-TQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 461 ~~v~Q~~~lf~~ti~~ni~~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
+|++|++.+|+.|++||+.++..... .+++. +.+..+ |++ ......+.+||||||||++||||++.
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~---------~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~ 148 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVE---------YYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLAN 148 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHH---------HHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999987642211 11222 222222 222 13345678899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCchHHH
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNSAYA 614 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 614 (1265)
+|++|||||||++||+.+...+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...+...|.
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 228 (241)
T PRK14250 149 NPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVT 228 (241)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHH
Confidence 999999999999999999999999998875 38999999999999875 999999999999999999998765443343
Q ss_pred H
Q 000830 615 A 615 (1265)
Q Consensus 615 ~ 615 (1265)
.
T Consensus 229 ~ 229 (241)
T PRK14250 229 K 229 (241)
T ss_pred H
Confidence 3
No 218
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=7.6e-42 Score=395.96 Aligned_cols=220 Identities=29% Similarity=0.497 Sum_probs=190.3
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCC--cEEEECCcccCCCCHHHH
Q 000830 1015 EGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTA--GKVMVDGIDIKRLNLKSL 1092 (1265)
Q Consensus 1015 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~--G~I~idG~di~~~~l~~l 1092 (1265)
.|.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|.|+++|++ |+|.+||.++...+. .
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~ 77 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--H 77 (362)
T ss_pred ceEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--H
Confidence 367999999999963 358999999999999999999999999999999999999999 999999999987665 3
Q ss_pred hcccEEEecCCCCCcc-cHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1093 RKHIALVQQEPALFAT-SIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1093 R~~i~~VpQdp~LF~g-TIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
+++++||+|++.+|.. |++|||.++.. ..+. +.+.++++..++.++.++. ..+||||||||+
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~-----------~~~LSgGq~QRv 146 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHL-----------PAQLSGGMQQRI 146 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCC-----------hhhCCHHHHHHH
Confidence 6789999999999976 99999987632 2232 3455566666665554443 357999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC---CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR---KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~---~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
+|||||+++|++||||||||+||+.+...+++.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 147 aLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~ 226 (362)
T TIGR03258 147 AIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQAL 226 (362)
T ss_pred HHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999999999999999998764 6899999999999865 999999999999999999999
Q ss_pred hhcCCcHHH
Q 000830 1242 VENEDGAYF 1250 (1265)
Q Consensus 1242 l~~~~g~f~ 1250 (1265)
.+++...|.
T Consensus 227 ~~~p~~~~~ 235 (362)
T TIGR03258 227 YDAPADGFA 235 (362)
T ss_pred HhCcCcHHH
Confidence 886655553
No 219
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.4e-41 Score=366.67 Aligned_cols=203 Identities=33% Similarity=0.544 Sum_probs=180.1
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
+.++++|++++|+.. ..++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|++
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 569999999999742 2368999999999999999999999999999999999999999999999999988888888899
Q ss_pred eeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000830 460 IGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNP 539 (1265)
Q Consensus 460 i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 539 (1265)
|+||+|+|.+|++|++||+.+... ...+++.++++ +++++.+||||||||++||||++.+|
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 999999999999999999986542 23333332221 34567899999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCc
Q 000830 540 SILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSH 602 (1265)
Q Consensus 540 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 602 (1265)
+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999988778999999999999988999999999999988763
No 220
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=9.1e-42 Score=379.93 Aligned_cols=212 Identities=35% Similarity=0.573 Sum_probs=180.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCH---HHHhc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNL---KSLRK 1094 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l---~~lR~ 1094 (1265)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 2458999999999999999999999999999999999999999999999999987654 44788
Q ss_pred ccEEEecCCCCCc-ccHHHHhccCCCC-----------CC---HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCCh
Q 000830 1095 HIALVQQEPALFA-TSIYENILYGKDG-----------AS---EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSG 1159 (1265)
Q Consensus 1095 ~i~~VpQdp~LF~-gTIreNl~~g~~~-----------~s---d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSg 1159 (1265)
+++|+||++.+|. .|++||+.++... .. ++++.++++..++.+ .......+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLAD-----------KAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHh-----------hhcCCcccCCH
Confidence 9999999999886 5999999765311 01 223444444444433 33445568999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1160 GQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1160 GQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
|||||++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998753 7899999999999865 9999999999999999
Q ss_pred Chhhhh
Q 000830 1237 THSSLV 1242 (1265)
Q Consensus 1237 t~~eLl 1242 (1265)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999874
No 221
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=385.91 Aligned_cols=214 Identities=29% Similarity=0.509 Sum_probs=185.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccC--CCCHHHHhc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIK--RLNLKSLRK 1094 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~--~~~l~~lR~ 1094 (1265)
.|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 5899999999962 245899999999999999999999999999999999999999999999999984 344667899
Q ss_pred ccEEEecCC--CCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000830 1095 HIALVQQEP--ALFATSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1095 ~i~~VpQdp--~LF~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrla 1166 (1265)
+++|+||+| .+|+.|++||+.++.. ..+. +.+.++++..++.++ ......+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHHHHH
Confidence 999999998 5788999999987421 2232 234555555555443 23445689999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||||+.+|+||||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||||++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998764 7899999999999974 99999999999999999999876
No 222
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=379.71 Aligned_cols=227 Identities=31% Similarity=0.463 Sum_probs=191.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCCCCHHH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKRLNLKS 1091 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~~l~~ 1091 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 3589999999999999999999999999999999999974 6999999999998888888
Q ss_pred HhcccEEEecCCCCC-cccHHHHhccCCC--C--CC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1092 LRKHIALVQQEPALF-ATSIYENILYGKD--G--AS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1092 lR~~i~~VpQdp~LF-~gTIreNl~~g~~--~--~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
+|++++|+||+|.+| ..|++||+.++.. . .. ++++.++++..++.+.+. ..+|+ ...+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~----~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLDA----PAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhcC----CcccCCHHHH
Confidence 999999999999755 6799999976431 1 11 235566666666644322 12333 3457999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhcCCcHHHHHH
Q 000830 1242 VENEDGAYFKLI 1253 (1265)
Q Consensus 1242 l~~~~g~f~~l~ 1253 (1265)
.+++...+.+.+
T Consensus 233 ~~~~~~~~~~~~ 244 (250)
T PRK14247 233 FTNPRHELTEKY 244 (250)
T ss_pred HcCCccHHHHHH
Confidence 875444454433
No 223
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-41 Score=378.76 Aligned_cols=221 Identities=31% Similarity=0.514 Sum_probs=185.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999741 35899999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEecCCCCCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFA-TSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~-gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||+|.+|. .|++||+.++.. ..+. +++.++++..++.+ +......+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999999996 699999976421 1121 22333343333321 012344567899999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCCc
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENEDG 1247 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g 1247 (1265)
++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.++...
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~ 229 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPAN 229 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCCC
Confidence 9999999999999999999999999999998753 7899999999998765 999999999999999999999764433
Q ss_pred HH
Q 000830 1248 AY 1249 (1265)
Q Consensus 1248 ~f 1249 (1265)
.+
T Consensus 230 ~~ 231 (242)
T cd03295 230 DF 231 (242)
T ss_pred hH
Confidence 34
No 224
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=7.5e-42 Score=395.99 Aligned_cols=223 Identities=27% Similarity=0.470 Sum_probs=186.2
Q ss_pred cccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCc--ceEEECCeeCCCCChHHH
Q 000830 379 SGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLS--GEILLDGNNIKGLDLKWL 456 (1265)
Q Consensus 379 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~--G~i~~~g~~~~~~~~~~~ 456 (1265)
.+.|+++||+++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.+.++ .
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~ 77 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--H 77 (362)
T ss_pred ceEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--H
Confidence 357999999999963 358999999999999999999999999999999999999999 999999999976654 3
Q ss_pred hhheeEEccCCccccc-cHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 457 RQQIGLVNQEPALFAT-TIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 457 r~~i~~v~Q~~~lf~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
++.|+||+|++.+|+. ||+|||.|+... ...++..+. +.+.++.+ |++........+||||||||+||||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~-----v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLAR 150 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAER-----VADALKLV--GLGDAAAHLPAQLSGGMQQRIAIAR 150 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHH
Confidence 5689999999999976 999999987421 122222211 11112222 3344455667789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC---CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCC
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVMV---GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNP 609 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~---~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 609 (1265)
||+.+|++||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++++.. ||+|++|++|++++.|+++++..++
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p 230 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAP 230 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 99999999999999999999999999999988754 7899999999999765 9999999999999999999998765
Q ss_pred chHH
Q 000830 610 NSAY 613 (1265)
Q Consensus 610 ~~~~ 613 (1265)
...|
T Consensus 231 ~~~~ 234 (362)
T TIGR03258 231 ADGF 234 (362)
T ss_pred CcHH
Confidence 4333
No 225
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=380.56 Aligned_cols=224 Identities=30% Similarity=0.494 Sum_probs=185.2
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCC--CC
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKG--LD 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 452 (1265)
..++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 35999999999963 3589999999999999999999999999999999999997 49999999998853 34
Q ss_pred hHHHhhheeEEccCCccccccHHHHhccCCCC---CCH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 453 LKWLRQQIGLVNQEPALFATTIRENILYGKDD---ATM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
...+|++|+||+|++.+|+.|++|||.++... ... +.+.++++..++.+. +++ ....++.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~---l~~----~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNE---VKD----KLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchh---hHH----HHhCCcccCCHHH
Confidence 45678899999999999989999999886421 111 122333333222111 122 2344667899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcch
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEE 604 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 604 (1265)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999865 99999999999999999999
Q ss_pred hccCCchHH
Q 000830 605 LISNPNSAY 613 (1265)
Q Consensus 605 l~~~~~~~~ 613 (1265)
+.+++...|
T Consensus 236 ~~~~~~~~~ 244 (254)
T PRK14273 236 LFFNPKNTK 244 (254)
T ss_pred HHhCCCChH
Confidence 876544433
No 226
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-42 Score=373.71 Aligned_cols=203 Identities=38% Similarity=0.609 Sum_probs=173.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+ ..+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEE
Confidence 478999999963 35899999999999999999999999999999999999999999999999997654 3577899
Q ss_pred EEecCCCCCc-ccHHHHhccCCCC--CC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFA-TSIYENILYGKDG--AS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~-gTIreNl~~g~~~--~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||+|.+|. .|++||+.++... .+ ++++.++++..++.++.. ....+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLN-----------RYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHHHHHH
Confidence 9999999886 5999999764221 12 223455555555544433 3345799999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
|+++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998753 7899999999999876 9999999999998875
No 227
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=394.25 Aligned_cols=221 Identities=31% Similarity=0.520 Sum_probs=184.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++...++ .+++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3789999999963 358999999999999999999999999999999999999999999999999976554 35689
Q ss_pred eEEccCCccccc-cHHHHhccCCCC------CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDD------ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
+||+|++.+|+. |++||+.|+... .+.++..+ +.. +.++.+ |++......+.+||||||||++|||
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~--~~~---~~l~~~--~L~~~~~~~~~~LSgGq~QRvalAr 149 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA--KVT---QLLEMV--QLAHLADRYPAQLSGGQKQRVALAR 149 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH--HHH---HHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 999999999985 999999987431 12222211 111 112222 2333345566789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCc
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPN 610 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 610 (1265)
||+.+|++||||||||+||+.++..+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 150 AL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~ 229 (353)
T PRK10851 150 ALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPA 229 (353)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999988754 7899999999999766 99999999999999999999987654
Q ss_pred hHH
Q 000830 611 SAY 613 (1265)
Q Consensus 611 ~~~ 613 (1265)
..|
T Consensus 230 ~~~ 232 (353)
T PRK10851 230 TRF 232 (353)
T ss_pred chH
Confidence 433
No 228
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.8e-41 Score=377.90 Aligned_cols=218 Identities=33% Similarity=0.570 Sum_probs=182.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCC-----cceEEECCeeCCCC--ChH
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPL-----SGEILLDGNNIKGL--DLK 454 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~~--~~~ 454 (1265)
++++||+++|++ .++++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999974 35899999999999999999999999999999999999998 99999999998753 455
Q ss_pred HHhhheeEEccCCccccccHHHHhccCCCC---CCHHH----HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHH
Q 000830 455 WLRQQIGLVNQEPALFATTIRENILYGKDD---ATMEE----ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQ 527 (1265)
Q Consensus 455 ~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~---~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 527 (1265)
.+|++++|+||++.+|+.|++||+.++... ...++ +.++++..+ +...+.......+.+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAA-------LWDEVKDRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcC-------CCcchhhHhhCCcccCCHHHHH
Confidence 678899999999999999999999875321 11222 222222222 2111113455667899999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhc
Q 000830 528 RIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELI 606 (1265)
Q Consensus 528 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 606 (1265)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767999999999998865 9999999999999999999887
Q ss_pred cCC
Q 000830 607 SNP 609 (1265)
Q Consensus 607 ~~~ 609 (1265)
..+
T Consensus 232 ~~~ 234 (247)
T TIGR00972 232 TNP 234 (247)
T ss_pred hCC
Confidence 543
No 229
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=380.64 Aligned_cols=219 Identities=32% Similarity=0.573 Sum_probs=184.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCC--CCh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKG--LDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 453 (1265)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 359999999999999999999999999999999999975 689999999999864 345
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCC--C-CH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDD--A-TM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
..+|++++|++|++.+|+.|++||+.++... . .. +++.++++..++.+ ...+..+..+.+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWD-------EVKDRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCch-------hhhHHhhCCcccCCHHHH
Confidence 6778899999999999989999999875311 1 11 22233333332221 122345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999998
Q ss_pred ccCC
Q 000830 606 ISNP 609 (1265)
Q Consensus 606 ~~~~ 609 (1265)
...+
T Consensus 236 ~~~~ 239 (253)
T PRK14242 236 FTRP 239 (253)
T ss_pred HcCC
Confidence 7653
No 230
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.7e-41 Score=389.86 Aligned_cols=226 Identities=29% Similarity=0.406 Sum_probs=189.4
Q ss_pred cEEEEeEEEECCCCC----------CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCC
Q 000830 1017 TIELRGVHFSYPSRP----------EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKR 1086 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~----------~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~ 1086 (1265)
-|+++|++++|+.+. ...+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|++||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 589999999996421 2468999999999999999999999999999999999999999999999999998
Q ss_pred CCHH---HHhcccEEEecCC--CCC-cccHHHHhccCC----CCCCHHHH----HHHHHHhchHHHHHhCCCCccccccC
Q 000830 1087 LNLK---SLRKHIALVQQEP--ALF-ATSIYENILYGK----DGASEGEV----IEAAKLANAHSFISALPEGYSTKVGE 1152 (1265)
Q Consensus 1087 ~~l~---~lR~~i~~VpQdp--~LF-~gTIreNl~~g~----~~~sd~ei----~~al~~a~l~~~i~~lp~Gldt~vge 1152 (1265)
++.. .+|++++||+|+| .|| ..|+.+||.++. +..+.++. .++++.+++.+ .....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhcC
Confidence 8754 3678999999999 477 479999986531 12343333 34444444421 12234
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeC
Q 000830 1153 RGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIES 1229 (1265)
Q Consensus 1153 ~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~ 1229 (1265)
...+||||||||++|||||+.+|++||+||||++||+.+...|.+.|+++.+ +.|+|+|||+++.+.. ||||+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4567999999999999999999999999999999999999999999998764 7899999999999986 999999999
Q ss_pred CEEEEecChhhhhhcCCcHHHHH
Q 000830 1230 GKIIEQGTHSSLVENEDGAYFKL 1252 (1265)
Q Consensus 1230 G~Ive~Gt~~eLl~~~~g~f~~l 1252 (1265)
|+|+|.|++++++++....|.+.
T Consensus 238 G~ive~g~~~~i~~~~~~py~~~ 260 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTKA 260 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHHH
Confidence 99999999999988666667663
No 231
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=384.71 Aligned_cols=216 Identities=33% Similarity=0.522 Sum_probs=183.0
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCC----CCHHH
Q 000830 1018 IELRGVHFSYPSRP--EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKR----LNLKS 1091 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----~~l~~ 1091 (1265)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997422 1359999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcccEEEecCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1092 LRKHIALVQQEP--ALFATSIYENILYGKD--GASEGE----VIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1092 lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
+|++++||||+| .+|+.|++||+.++.. ..+.++ +.++++.+++.+ .........|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPE----------ELLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCh----------hhhhCCcccCCHHHHH
Confidence 888999999998 6888999999987532 223333 334444444421 1123445679999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSS 1240 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1240 (1265)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 7899999999999865 99999999999999999999
Q ss_pred hhh
Q 000830 1241 LVE 1243 (1265)
Q Consensus 1241 Ll~ 1243 (1265)
+.+
T Consensus 233 ~~~ 235 (290)
T PRK13634 233 IFA 235 (290)
T ss_pred Hhc
Confidence 875
No 232
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-41 Score=380.26 Aligned_cols=224 Identities=33% Similarity=0.508 Sum_probs=189.5
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCC--CC
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKR--LN 1088 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~ 1088 (1265)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 46999999999963 358999999999999999999999999999999999987 689999999999863 56
Q ss_pred HHHHhcccEEEecCCCCCcccHHHHhccCCC--CCC---HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1089 LKSLRKHIALVQQEPALFATSIYENILYGKD--GAS---EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~s---d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
...+|++++|+||++.+|..|++||+.++.. ... ++++.++++.+++.+. ++........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDE-------CKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcch-------hhhhhCCCcccCCHHHHH
Confidence 6778999999999999999999999987532 111 2345556666655332 222334455689999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeC-----------CE
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIES-----------GK 1231 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~-----------G~ 1231 (1265)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999998778899999999999876 999999996 77
Q ss_pred EEEecChhhhhhcCCcHH
Q 000830 1232 IIEQGTHSSLVENEDGAY 1249 (1265)
Q Consensus 1232 Ive~Gt~~eLl~~~~g~f 1249 (1265)
++|.|+++++.+++...|
T Consensus 242 ~~~~~~~~~~~~~~~~~~ 259 (269)
T PRK14259 242 LVEFNETKKIFNSPKQKA 259 (269)
T ss_pred EEEeCCHHHHHhCcCChH
Confidence 999999999986444333
No 233
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-41 Score=379.44 Aligned_cols=222 Identities=32% Similarity=0.558 Sum_probs=186.7
Q ss_pred cccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCC--C
Q 000830 379 SGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKG--L 451 (1265)
Q Consensus 379 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~ 451 (1265)
.+.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 356999999999963 359999999999999999999999999999999999986 589999999999853 3
Q ss_pred ChHHHhhheeEEccCCccccccHHHHhccCCC---CCCHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChH
Q 000830 452 DLKWLRQQIGLVNQEPALFATTIRENILYGKD---DATME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGG 524 (1265)
Q Consensus 452 ~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 524 (1265)
+...+|++|+|++|++.+|+.|++||+.++.. ..+.+ ++.++++..+ ++.++.....+...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAA-------LWNEVKDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcC-------CChhhHHHHhcCCCCCCHH
Confidence 55678889999999999999999999987632 11222 2222232222 2222334566778899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcc
Q 000830 525 QKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHE 603 (1265)
Q Consensus 525 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 603 (1265)
||||++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+.+
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778899999999999865 9999999999999999999
Q ss_pred hhccCCc
Q 000830 604 ELISNPN 610 (1265)
Q Consensus 604 ~l~~~~~ 610 (1265)
++...+.
T Consensus 241 ~~~~~~~ 247 (260)
T PRK10744 241 TIFTKPA 247 (260)
T ss_pred HHHhCCC
Confidence 9876533
No 234
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=396.49 Aligned_cols=218 Identities=32% Similarity=0.513 Sum_probs=187.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .++++
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCE
Confidence 4899999999963 358999999999999999999999999999999999999999999999999987665 35789
Q ss_pred EEEecCCCCCcc-cHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPALFAT-SIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
+||||++.+|.. |++||+.++.. ..+. +++.++++..++.++.++ ...+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~-----------~~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDR-----------KPKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcC-----------ChhhCCHHHHHHHHHHH
Confidence 999999999965 99999987632 1222 345566666666544433 33579999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCC
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENED 1246 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1246 (1265)
||+++|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.+.
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998753 7899999999998875 99999999999999999999987655
Q ss_pred cHHH
Q 000830 1247 GAYF 1250 (1265)
Q Consensus 1247 g~f~ 1250 (1265)
..|-
T Consensus 227 ~~~~ 230 (369)
T PRK11000 227 NRFV 230 (369)
T ss_pred cHHH
Confidence 4443
No 235
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=385.63 Aligned_cols=220 Identities=31% Similarity=0.538 Sum_probs=185.4
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCC----ChHH
Q 000830 382 IEFKDVSFCYPSRP--DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGL----DLKW 455 (1265)
Q Consensus 382 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~ 455 (1265)
++++|++|+|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996422 24699999999999999999999999999999999999999999999999998653 3457
Q ss_pred HhhheeEEccCC--ccccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccc-cccCCCCCCChHHHHHHH
Q 000830 456 LRQQIGLVNQEP--ALFATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFET-QVGERGIQLSGGQKQRIA 530 (1265)
Q Consensus 456 ~r~~i~~v~Q~~--~lf~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~~~~g~~LSgGqkqria 530 (1265)
+|++||||+|+| .+|+.|+.|||.++... .+.++..+. +.+.+..+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 888999999997 68888999999987422 233332221 12333333 5553 445678899999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhh-ccCEEEEEeCCEEEEeeCcchhcc
Q 000830 531 ISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIR-NADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 531 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
|||||+.+|+||||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 3899999999999986 499999999999999999988876
Q ss_pred C
Q 000830 608 N 608 (1265)
Q Consensus 608 ~ 608 (1265)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 236
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=380.67 Aligned_cols=222 Identities=35% Similarity=0.532 Sum_probs=190.2
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCC--C
Q 000830 1015 EGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKR--L 1087 (1265)
Q Consensus 1015 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~ 1087 (1265)
...|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 18 ~~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 447999999999963 468999999999999999999999999999999999997 579999999999864 3
Q ss_pred CHHHHhcccEEEecCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChh
Q 000830 1088 NLKSLRKHIALVQQEPALFATSIYENILYGKD--GA-S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGG 1160 (1265)
Q Consensus 1088 ~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1160 (1265)
+...+|+.++||||++.+|..|++||+.++.. .. + ++++.++++..++.+.+. +........||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHH
Confidence 46678999999999999999999999987522 11 2 234555566666544332 3345666789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChh
Q 000830 1161 QKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHS 1239 (1265)
Q Consensus 1161 QkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1239 (1265)
||||++||||++++|++|||||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778899999999999865 9999999999999999999
Q ss_pred hhhhcCC
Q 000830 1240 SLVENED 1246 (1265)
Q Consensus 1240 eLl~~~~ 1246 (1265)
++.+.+.
T Consensus 248 ~~~~~~~ 254 (267)
T PRK14237 248 NIFTNPK 254 (267)
T ss_pred HHhcCCC
Confidence 9976433
No 237
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-41 Score=376.50 Aligned_cols=215 Identities=34% Similarity=0.529 Sum_probs=179.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .+++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999964 459999999999999999999999999999999999999999999999999875543 256899
Q ss_pred EEccCCcccc-ccHHHHhccCCCCC------CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 462 LVNQEPALFA-TTIRENILYGKDDA------TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 462 ~v~Q~~~lf~-~ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
||+|+|.+|. .|++||+.++.... ...+..+ .+.+.+..+ |++........+||||||||++||||
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~a 150 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRA-----KVHELLKLV--QLDWLADRYPAQLSGGQRQRVALARA 150 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 9999999986 49999998864211 1111111 111223322 23444556667899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|+.+|++|||||||++||+++.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 151 LAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 9999999999999999999999999999988753 7899999999998765 999999999999999999988754
No 238
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.4e-41 Score=365.68 Aligned_cols=200 Identities=39% Similarity=0.616 Sum_probs=181.7
Q ss_pred EEEEeEEEECCCCCC--cccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcc
Q 000830 1018 IELRGVHFSYPSRPE--VVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKH 1095 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~--~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 1095 (1265)
|+++||+++|++..+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999975321 3699999999999999999999999999999999999999999999999 6
Q ss_pred cEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000830 1096 IALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNP 1175 (1265)
Q Consensus 1096 i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p 1175 (1265)
++|+||+|.+|++|++||+.++. ..++++.+++++.+++.+++..+|.|+++.+.+.+.+||+|||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGK-PFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCC-CcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998853 34566778888888999999999999999999999999999999999999999999
Q ss_pred CEEEEecCcCCCCHHHHHHHHH-HHHHHc-CCceEEEEecCchhhhccCEEEEEeCCE
Q 000830 1176 EILLLDEATSALDVESERVVQQ-ALQRLM-RKRTTIIVAHRLSTIKNADQISVIESGK 1231 (1265)
Q Consensus 1176 ~ILlLDEaTSaLD~~te~~I~~-~l~~~~-~~~TvI~IaHRl~ti~~~DrI~vl~~G~ 1231 (1265)
+++||||||++||+++.+.+.+ .+++.. +++|+|++||+++.+..||+|++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 566554 4689999999999998999999999985
No 239
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.6e-41 Score=372.79 Aligned_cols=216 Identities=31% Similarity=0.483 Sum_probs=180.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH-hhhe
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL-RQQI 460 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 460 (1265)
|+++||+++|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 358999999999999999999999999999999999999999999999999987776554 5679
Q ss_pred eEEccCCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNP 539 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 539 (1265)
+|++|++.+|+. |++||+.++.......+.. .+...+.+.+..+ +......+.+||||||||++|||||+.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~--~~~~~~l~~~~~l----~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRK--ARLERVYELFPRL----KERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHH--HHHHHHHHHHHhh----hhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999987 9999998864322111111 1111222222222 23345566789999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhc
Q 000830 540 SILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELI 606 (1265)
Q Consensus 540 ~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 606 (1265)
++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999998875 48999999999998866 9999999999999999887764
No 240
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.2e-41 Score=374.58 Aligned_cols=216 Identities=31% Similarity=0.562 Sum_probs=183.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 789999999963 45899999999999999999999999999999999999999999999999998776544 45899
Q ss_pred EEecCCCC-CcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000830 1098 LVQQEPAL-FATSIYENILYGKD--GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKN 1174 (1265)
Q Consensus 1098 ~VpQdp~L-F~gTIreNl~~g~~--~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~ 1174 (1265)
|+||++.+ +..|+++|+.++.. ..+.++..+ .+.++++.+ |++........+||||||||++|||||+++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 46799999976421 122222111 122333333 455555566678999999999999999999
Q ss_pred CCEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhhc
Q 000830 1175 PEILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1175 p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999876 37899999999999988999999999999999999999863
No 241
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=385.82 Aligned_cols=217 Identities=26% Similarity=0.464 Sum_probs=182.6
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCC---------
Q 000830 1018 IELRGVHFSYPSRP--EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKR--------- 1086 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--------- 1086 (1265)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 88999999997432 1358999999999999999999999999999999999999999999999987632
Q ss_pred ---------------CCHHHHhcccEEEecCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhCC
Q 000830 1087 ---------------LNLKSLRKHIALVQQEP--ALFATSIYENILYGKD--GASEGE----VIEAAKLANAHSFISALP 1143 (1265)
Q Consensus 1087 ---------------~~l~~lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp 1143 (1265)
.+...+|++++||||+| .+|..|++|||.++.. ..+.++ +.++++.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------ 156 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDE------ 156 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh------
Confidence 13457889999999986 6888999999987632 233333 444454444421
Q ss_pred CCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-c
Q 000830 1144 EGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-A 1221 (1265)
Q Consensus 1144 ~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~ 1221 (1265)
........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. |
T Consensus 157 ----~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~a 232 (305)
T PRK13651 157 ----SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWT 232 (305)
T ss_pred ----hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhC
Confidence 12334556899999999999999999999999999999999999999999999875 47899999999998755 9
Q ss_pred CEEEEEeCCEEEEecChhhhhhc
Q 000830 1222 DQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1222 DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
|||++|++|++++.|+++++.++
T Consensus 233 drv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 233 KRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999998763
No 242
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=381.58 Aligned_cols=212 Identities=29% Similarity=0.536 Sum_probs=180.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++|+|++ ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++...+...++++|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 23599999999999999999999999999999999999999999999999999888888888899
Q ss_pred eEEccCC--ccccccHHHHhccCCCC--CCHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 461 GLVNQEP--ALFATTIRENILYGKDD--ATME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 461 ~~v~Q~~--~lf~~ti~~ni~~~~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
+||+|+| .++..|+.||+.++... .+.+ ++.++++..++. ........+||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~-----------~~~~~~~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMW-----------DFRDKPPYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-----------HHhcCChhhCCHHHHHHHHHH
Confidence 9999998 57888999999986421 1222 222223333322 223344568999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhh-ccCEEEEEeCCEEEEeeCcchh
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIR-NADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l 605 (1265)
|||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999999999998875 4899999999999985 5999999999999999998654
No 243
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=385.88 Aligned_cols=220 Identities=30% Similarity=0.518 Sum_probs=182.3
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCC----CChHH
Q 000830 382 IEFKDVSFCYPSRP--DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKG----LDLKW 455 (1265)
Q Consensus 382 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~ 455 (1265)
++++|++|+|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997422 1469999999999999999999999999999999999999999999999999863 34556
Q ss_pred HhhheeEEccCC--ccccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCccccc-ccccCCCCCCChHHHHHHH
Q 000830 456 LRQQIGLVNQEP--ALFATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFE-TQVGERGIQLSGGQKQRIA 530 (1265)
Q Consensus 456 ~r~~i~~v~Q~~--~lf~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqria 530 (1265)
.|++|+||+|+| .+|+.||+|||.|+... .+.++..+.+ . +.++.+ |++ ......+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~--~---~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKA--R---EMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHH--H---HHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 68888999999987421 2333222111 1 112222 232 2234567789999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 531 ISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 531 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
|||||+.+|++|||||||++||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999988753 8999999999999865 99999999999999999988875
Q ss_pred C
Q 000830 608 N 608 (1265)
Q Consensus 608 ~ 608 (1265)
.
T Consensus 236 ~ 236 (290)
T PRK13634 236 D 236 (290)
T ss_pred C
Confidence 4
No 244
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.1e-41 Score=378.64 Aligned_cols=218 Identities=31% Similarity=0.518 Sum_probs=184.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCC---------
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLN--------- 1088 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~--------- 1088 (1265)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999963 35899999999999999999999999999999999999999999999999987653
Q ss_pred ----HHHHhcccEEEecCCCCCc-ccHHHHhccCCC---CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCC
Q 000830 1089 ----LKSLRKHIALVQQEPALFA-TSIYENILYGKD---GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQ 1156 (1265)
Q Consensus 1089 ----l~~lR~~i~~VpQdp~LF~-gTIreNl~~g~~---~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~ 1156 (1265)
...+|++++|+||++.+|. .|++||+.++.. ... ++++.++++..++.++ .......
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADK-----------ADHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhH-----------hhcChhh
Confidence 2467889999999999885 799999986421 112 2334455555554443 3344568
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEE
Q 000830 1157 LSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKII 1233 (1265)
Q Consensus 1157 LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Iv 1233 (1265)
||||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998764 7899999999999965 9999999999999
Q ss_pred EecChhhhhhcCCcHH
Q 000830 1234 EQGTHSSLVENEDGAY 1249 (1265)
Q Consensus 1234 e~Gt~~eLl~~~~g~f 1249 (1265)
+.|+++++.+.....|
T Consensus 227 ~~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 227 EQGKPDEIFRQPKEER 242 (252)
T ss_pred EeCCHHHHhcCCCcHH
Confidence 9999999987544334
No 245
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=379.59 Aligned_cols=225 Identities=32% Similarity=0.498 Sum_probs=188.5
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCCC--C
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKRL--N 1088 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~ 1088 (1265)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +
T Consensus 11 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 36999999999963 3589999999999999999999999999999999999985 799999999998653 3
Q ss_pred HHHHhcccEEEecCCCCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1089 LKSLRKHIALVQQEPALFATSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
...+|+.++|+||++.+|..|++||+.++.. ..+. +++.++++.+++.+.+ +.........||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~ 160 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQ 160 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHH
Confidence 4567889999999999999999999986421 1222 2345555555553221 1222344567999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999876 999999999999999999999
Q ss_pred hhcCCcHHH
Q 000830 1242 VENEDGAYF 1250 (1265)
Q Consensus 1242 l~~~~g~f~ 1250 (1265)
.+++...|.
T Consensus 241 ~~~~~~~~~ 249 (258)
T PRK14268 241 FHNPREKST 249 (258)
T ss_pred hcCCCCHHH
Confidence 865444443
No 246
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-41 Score=377.32 Aligned_cols=220 Identities=35% Similarity=0.556 Sum_probs=180.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCC---hHHHhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLD---LKWLRQ 458 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r~ 458 (1265)
++++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999964 145999999999999999999999999999999999999999999999999988776 456788
Q ss_pred heeEEccCCcccc-ccHHHHhccCCCCCC--HHHH---HHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 459 QIGLVNQEPALFA-TTIRENILYGKDDAT--MEEI---TRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~-~ti~~ni~~~~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
.++|++|++.+|. .|++||+.++..... ...+ ........+.+.+..+ |++......+.+||||||||++||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHH
Confidence 9999999999887 599999987542110 0000 0000011112223332 334445667789999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
|||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAEL 232 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHh
Confidence 99999999999999999999999999999999875 38999999999999984 999999999999999998876
No 247
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.5e-41 Score=380.83 Aligned_cols=224 Identities=27% Similarity=0.461 Sum_probs=187.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHH---HHh
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLK---SLR 1093 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR 1093 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 5899999999963 4589999999999999999999999999999999999999999999999999876543 357
Q ss_pred cccEEEecCCCCCcc-cHHHHhccCCC---CCCHH----HHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1094 KHIALVQQEPALFAT-SIYENILYGKD---GASEG----EVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1094 ~~i~~VpQdp~LF~g-TIreNl~~g~~---~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
++++|+||++.+|.+ |++||+.++.. ..+.+ .+.++++..++.+. ......+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHH
Confidence 889999999999986 99999976421 12222 23344444444332 2233457999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999876 9999999999999999999998
Q ss_pred hcCCcHHHHHHH
Q 000830 1243 ENEDGAYFKLIN 1254 (1265)
Q Consensus 1243 ~~~~g~f~~l~~ 1254 (1265)
+.....+..++.
T Consensus 233 ~~~~~~~~~~~~ 244 (269)
T PRK11831 233 ANPDPRVRQFLD 244 (269)
T ss_pred cCCcHHHHHHHH
Confidence 754445555554
No 248
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=380.49 Aligned_cols=223 Identities=32% Similarity=0.533 Sum_probs=188.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCCCC--HH
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKRLN--LK 1090 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~~~--l~ 1090 (1265)
=+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 478999999963 468999999999999999999999999999999999986 47999999999987543 34
Q ss_pred HHhcccEEEecCCCCCcccHHHHhccCC--CCC------CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1091 SLRKHIALVQQEPALFATSIYENILYGK--DGA------SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1091 ~lR~~i~~VpQdp~LF~gTIreNl~~g~--~~~------sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
.+|++++|+||++.+|.+|++||+.++. .+. .++++.++++..++.+.+ .+.+...+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHH
Confidence 6789999999999999999999997641 111 123455566666654322 1234455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999875 999999999999999999999
Q ss_pred hhcCCcHHH
Q 000830 1242 VENEDGAYF 1250 (1265)
Q Consensus 1242 l~~~~g~f~ 1250 (1265)
++++...|.
T Consensus 236 ~~~~~~~~~ 244 (251)
T PRK14244 236 FKNPQSSKT 244 (251)
T ss_pred hcCCCChHH
Confidence 876555443
No 249
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=374.28 Aligned_cols=210 Identities=27% Similarity=0.446 Sum_probs=178.3
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH---H
Q 000830 1017 TIELRGVHFSYPSRP-EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS---L 1092 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---l 1092 (1265)
.++++||+++|+++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997432 146899999999999999999999999999999999999999999999999998887654 3
Q ss_pred h-cccEEEecCCCCCcc-cHHHHhccCC--CCCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000830 1093 R-KHIALVQQEPALFAT-SIYENILYGK--DGASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQR 1164 (1265)
Q Consensus 1093 R-~~i~~VpQdp~LF~g-TIreNl~~g~--~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQr 1164 (1265)
| +.++|+||+|.+|.. |++||+.++. ...+. +++.++++..++ +........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGL-----------EHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------chhhhCChhhCCHHHHHH
Confidence 3 689999999999875 9999997631 11122 234445544444 333444556899999999
Q ss_pred HHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhccCEEEEEeCCEEEEecC
Q 000830 1165 VAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKNADQISVIESGKIIEQGT 1237 (1265)
Q Consensus 1165 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt 1237 (1265)
++||||++++|+||||||||++||+++...+.+.|++.. +++|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4789999999999999999999999999998775
No 250
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-41 Score=380.58 Aligned_cols=223 Identities=32% Similarity=0.530 Sum_probs=190.7
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCC--C
Q 000830 1015 EGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKR--L 1087 (1265)
Q Consensus 1015 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~ 1087 (1265)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 457999999999963 3589999999999999999999999999999999999984 89999999999875 3
Q ss_pred CHHHHhcccEEEecCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChh
Q 000830 1088 NLKSLRKHIALVQQEPALFATSIYENILYGKD--GA-S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGG 1160 (1265)
Q Consensus 1088 ~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1160 (1265)
+...+|++++|+||++.+|.+|++||+.++.. .. . ++++.++++.+++.+.+. +..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 45678999999999999999999999976421 11 1 234566666666544332 2345566789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChh
Q 000830 1161 QKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHS 1239 (1265)
Q Consensus 1161 QkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1239 (1265)
||||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998778999999999999875 9999999999999999999
Q ss_pred hhhhcCCc
Q 000830 1240 SLVENEDG 1247 (1265)
Q Consensus 1240 eLl~~~~g 1247 (1265)
++.+++..
T Consensus 253 ~~~~~~~~ 260 (272)
T PRK14236 253 TLFTSPAK 260 (272)
T ss_pred HHhcCCCc
Confidence 99864333
No 251
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-41 Score=382.58 Aligned_cols=217 Identities=34% Similarity=0.549 Sum_probs=188.8
Q ss_pred cEEEEeEEEECCCCC---CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCC-HHHH
Q 000830 1017 TIELRGVHFSYPSRP---EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLN-LKSL 1092 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~---~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~-l~~l 1092 (1265)
.|+++|++++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 589999999997431 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcccEEEecCCC--CCcccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000830 1093 RKHIALVQQEPA--LFATSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQR 1164 (1265)
Q Consensus 1093 R~~i~~VpQdp~--LF~gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQr 1164 (1265)
|++++|+||+|. +|..|+.+|+.++.. ..+ ++++.++++.+++.++..+.| .+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 677799999987521 122 345667777777766655443 5799999999
Q ss_pred HHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhh
Q 000830 1165 VAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1165 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999999998753 78999999999999889999999999999999999997
Q ss_pred hc
Q 000830 1243 EN 1244 (1265)
Q Consensus 1243 ~~ 1244 (1265)
.+
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 63
No 252
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=394.99 Aligned_cols=206 Identities=35% Similarity=0.622 Sum_probs=178.2
Q ss_pred ccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHH----hcccEEEecCCCCCc-c
Q 000830 1034 VIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSL----RKHIALVQQEPALFA-T 1108 (1265)
Q Consensus 1034 ~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l----R~~i~~VpQdp~LF~-g 1108 (1265)
++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.|+.+.+...+ |++++||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998876554 468999999999996 5
Q ss_pred cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEec
Q 000830 1109 SIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDE 1182 (1265)
Q Consensus 1109 TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDE 1182 (1265)
|++||+.++.. ..+ ++++.++++..++.++..+.| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987521 112 234566677777665554443 5799999999999999999999999999
Q ss_pred CcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCCcHHH
Q 000830 1183 ATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENEDGAYF 1250 (1265)
Q Consensus 1183 aTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~ 1250 (1265)
|||+||+.+.+.+++.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++++++...|.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v 261 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYV 261 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHH
Confidence 999999999999999999875 37899999999999865 999999999999999999999875544443
No 253
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=378.29 Aligned_cols=224 Identities=31% Similarity=0.509 Sum_probs=188.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC--C---CCcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD--P---TAGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--~~l 1089 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 358999999999999999999999999999999999997 3 58999999999864 445
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC--C-CCHH----HHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD--G-ASEG----EVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~-~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|++++|+||+|.+|..|++||+.++.. . .+++ ++.++++..++.+++. ........+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 678899999999999999999999976421 1 1222 2344455555543322 223445668999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999875 999999999999999999998
Q ss_pred hhcCCcHHH
Q 000830 1242 VENEDGAYF 1250 (1265)
Q Consensus 1242 l~~~~g~f~ 1250 (1265)
.++....|.
T Consensus 242 ~~~~~~~~~ 250 (259)
T PRK14274 242 FSNPDDQRT 250 (259)
T ss_pred hhCCCCHHH
Confidence 765444433
No 254
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=378.73 Aligned_cols=224 Identities=33% Similarity=0.506 Sum_probs=187.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 1089 (1265)
.|+++||+|+|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 358999999999999999999999999999999999997 479999999999864 345
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC--CCC-----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD--GAS-----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~s-----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|+.++|+||++.+|+.|++||+.++.. ... ++++.++++..+++... + ........+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~----~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---K----DNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---H----HHhccChhhCCHHHH
Confidence 567889999999999999999999986532 111 22344555555543211 1 122345568999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778899999999999876 999999999999999999999
Q ss_pred hhcCCcHHH
Q 000830 1242 VENEDGAYF 1250 (1265)
Q Consensus 1242 l~~~~g~f~ 1250 (1265)
...+...|.
T Consensus 234 ~~~~~~~~~ 242 (251)
T PRK14251 234 FIAPKKQIT 242 (251)
T ss_pred HhCCCCHHH
Confidence 764443343
No 255
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.3e-41 Score=371.41 Aligned_cols=203 Identities=32% Similarity=0.524 Sum_probs=169.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChH---HHhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLK---WLRQ 458 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~ 458 (1265)
++++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6899999999642 23599999999999999999999999999999999999999999999999998766543 4678
Q ss_pred heeEEccCCccccc-cHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 459 QIGLVNQEPALFAT-TIRENILYGKDD--AT----MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~~-ti~~ni~~~~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
+++|++|++.+|.. |++||+.++... .. .+++.++++..+ +.........+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVG-----------LEGKAHALPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------ChhhhhCChhhCCHHHHHHHHH
Confidence 99999999999875 999999875311 11 122333333332 2233344556899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEE
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKI 596 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i 596 (1265)
||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999998875 48999999999999875 999999999975
No 256
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-41 Score=376.00 Aligned_cols=218 Identities=35% Similarity=0.570 Sum_probs=183.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
++++||+++|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999741 45899999999999999999999999999999999999999999999999998877777888999
Q ss_pred EEccCCcccc-ccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccc--cccCCCCCCChHHHHHHHHHHHhc
Q 000830 462 LVNQEPALFA-TTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFET--QVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 462 ~v~Q~~~lf~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t--~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
|++|++.+|+ .|++||+.++... ...++.. ..+.+.+..+ |+.. ...+.+.+||||||||++|||||+
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIR-----ERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999996 5999999875321 1111111 1122333333 2332 456677899999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 537 KNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
++|++|||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999999998753 8999999999998765 999999999999999999888654
No 257
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-41 Score=374.71 Aligned_cols=220 Identities=35% Similarity=0.561 Sum_probs=182.2
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChH---HHh
Q 000830 382 IEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLK---WLR 457 (1265)
Q Consensus 382 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r 457 (1265)
|+++|++++|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999997431 12699999999999999999999999999999999999999999999999998876553 347
Q ss_pred hheeEEccCCcccc-ccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 458 QQIGLVNQEPALFA-TTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
+.++|++|++.+|. .|++||+.++... ....+.. ..+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~a 154 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIE-----ERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARA 154 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 88999999999997 5999999875321 1111111 1122333333 34444555667899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVM-V-GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|+.+|++|||||||++||+.+...+.+.|+++. + ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 155 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (233)
T cd03258 155 LANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFAN 231 (233)
T ss_pred HhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999998875 3 8999999999999865 999999999999999998887643
No 258
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.2e-41 Score=370.42 Aligned_cols=207 Identities=26% Similarity=0.487 Sum_probs=176.6
Q ss_pred EEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1018 IELRGVHFSYPSRPE-VVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
|+++||+++|++... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 789999999974321 268999999999999999999999999999999999999999999999999975 456778999
Q ss_pred EEEecCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPALFAT-SIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
+|+||+|.+|.+ |++||+.+... ..+ ++++.++++..++.+. ......+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEEL-----------LDRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhhhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975321 122 2344555555555443 33455689999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
|++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999875 47899999999999876 9999999999998865
No 259
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=385.36 Aligned_cols=220 Identities=27% Similarity=0.493 Sum_probs=181.6
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCC---------
Q 000830 382 IEFKDVSFCYPSRP--DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKG--------- 450 (1265)
Q Consensus 382 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--------- 450 (1265)
|+++|++|+|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999997432 1359999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CChHHHhhheeEEccCC--ccccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCccccc
Q 000830 451 ---------------LDLKWLRQQIGLVNQEP--ALFATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFE 511 (1265)
Q Consensus 451 ---------------~~~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~ 511 (1265)
.+...+|++||||+|+| .+|..||+|||.|+... ...++..+.+ . +.+..+ |++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~--~---~~l~~~--gL~ 155 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRA--A---KYIELV--GLD 155 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHH--H---HHHHHc--CCC
Confidence 13456788999999986 67888999999987432 2333332211 1 112222 232
Q ss_pred -ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhh-ccCEE
Q 000830 512 -TQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIR-NADVI 588 (1265)
Q Consensus 512 -t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i 588 (1265)
........+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+. .||+|
T Consensus 156 ~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv 235 (305)
T PRK13651 156 ESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRT 235 (305)
T ss_pred hhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEE
Confidence 23556778999999999999999999999999999999999999999999998875 4899999999999875 49999
Q ss_pred EEEeCCEEEEeeCcchhccC
Q 000830 589 AVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 589 ~~l~~G~i~~~g~~~~l~~~ 608 (1265)
++|++|++++.|+++++.+.
T Consensus 236 ~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 236 IFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEECCEEEEECCHHHHhcC
Confidence 99999999999999998764
No 260
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-41 Score=375.88 Aligned_cols=224 Identities=34% Similarity=0.556 Sum_probs=189.0
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCC--CC
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKR--LN 1088 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~ 1088 (1265)
|.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999973 3589999999999999999999999999999999999863 68999999999875 45
Q ss_pred HHHHhcccEEEecCCCCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhH
Q 000830 1089 LKSLRKHIALVQQEPALFATSIYENILYGKD--GA-----SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQ 1161 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1161 (1265)
...+|++++|+||+|.+|+.|+++|+.++.. .. .++++.++++.+++.+.+. ........+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHH
Confidence 5678999999999999999999999987521 11 1234455555555543322 22344556899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSS 1240 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1240 (1265)
|||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778899999999998876 99999999999999999999
Q ss_pred hhhcCCcHH
Q 000830 1241 LVENEDGAY 1249 (1265)
Q Consensus 1241 Ll~~~~g~f 1249 (1265)
+..+....+
T Consensus 232 ~~~~~~~~~ 240 (250)
T PRK14240 232 LFTNPKDKR 240 (250)
T ss_pred HHhCCCChH
Confidence 976544444
No 261
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.5e-41 Score=376.43 Aligned_cols=220 Identities=34% Similarity=0.543 Sum_probs=179.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh---HHHhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL---KWLRQ 458 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~ 458 (1265)
|+++|++++|+. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 2459999999999999999999999999999999999999999999999999877654 34678
Q ss_pred heeEEccCCccccc-cHHHHhccCCCCCC--HHHH---HHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 459 QIGLVNQEPALFAT-TIRENILYGKDDAT--MEEI---TRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~~-ti~~ni~~~~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
+++||+|++.+|+. |++||+.++..... .... ........+.+.+..+ |++......+.+||||||||++||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHH
Confidence 89999999998874 99999987642110 0000 0000011122223333 344445667789999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
|||+.+|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||++++|++|++++.|+++++
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 99999999999999999999999999999998874 37999999999999865 999999999999999998886
No 262
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=381.43 Aligned_cols=214 Identities=30% Similarity=0.509 Sum_probs=187.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.++++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++...+...+++++
T Consensus 3 ~l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 37899999999632 3589999999999999999999999999999999999999999999999999887778889999
Q ss_pred EEEecCC--CCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1097 ALVQQEP--ALFATSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1097 ~~VpQdp--~LF~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
+||||+| .+|..|+++|+.++.. ..+. +.+.++++..++.++.... ...||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrl~la 149 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRV-----------PHHLSGGEKKRVAIA 149 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHHHHHH
Confidence 9999998 4788899999976421 2232 3456667776766554443 347999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhh
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIK-NADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~-~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||+.+|++|||||||++||+.+.+.+.+.+++..+ ++|+|++||+++.+. .||||++|++|++++.|+++++++
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 999999999999999999999999999999998764 789999999999996 599999999999999999999976
No 263
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-41 Score=380.31 Aligned_cols=215 Identities=33% Similarity=0.603 Sum_probs=186.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++|++++|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 34689999999999999999999999999999999999999999999999999887878889999
Q ss_pred EEEecCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1097 ALVQQEP--ALFATSIYENILYGKD--GASEGE----VIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1097 ~~VpQdp--~LF~gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
+|+||+| .++..|++||+.++.. ..+.++ +.++++..++.++..+ ...+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDK-----------EPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------CcccCCHHHHHHHHHH
Confidence 9999998 4567899999987521 123332 4445555555544433 3468999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhh
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999999998753 489999999999998899999999999999999999876
No 264
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=377.81 Aligned_cols=223 Identities=32% Similarity=0.509 Sum_probs=187.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhcc---CCC--CCcEEEECCcccCCC--CH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRF---YDP--TAGKVMVDGIDIKRL--NL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl---~~p--~~G~I~idG~di~~~--~l 1089 (1265)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999963 3589999999999999999999999999999999997 454 589999999998754 34
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD--GA-----SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|++++|+||+|.+|..|++||+.++.. .. .+++++++++..++.+++. +.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 677899999999999999999999976421 11 1234455555555543332 234456678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhcCCcHH
Q 000830 1242 VENEDGAY 1249 (1265)
Q Consensus 1242 l~~~~g~f 1249 (1265)
.+++...|
T Consensus 233 ~~~~~~~~ 240 (250)
T PRK14245 233 FTNPEKEA 240 (250)
T ss_pred hcCCCChH
Confidence 87544443
No 265
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.6e-41 Score=387.11 Aligned_cols=229 Identities=27% Similarity=0.414 Sum_probs=188.4
Q ss_pred cEEEEeEEEECCCCC----------CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCC
Q 000830 381 HIEFKDVSFCYPSRP----------DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKG 450 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~----------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~ 450 (1265)
-++++|++++|+.+. ..++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 589999999996321 2468999999999999999999999999999999999999999999999999988
Q ss_pred CChHH---HhhheeEEccCC--cccc-ccHHHHhccCC----CCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCC
Q 000830 451 LDLKW---LRQQIGLVNQEP--ALFA-TTIRENILYGK----DDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQ 520 (1265)
Q Consensus 451 ~~~~~---~r~~i~~v~Q~~--~lf~-~ti~~ni~~~~----~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 520 (1265)
.+... +|++|+||+|+| .|++ .||.|||.++. +..+.++..+.++ ++.+.+ .++ +......+.+
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~--~~l~~v-gl~---~~~~~~~p~~ 161 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVK--AMMLKV-GLL---PNLINRYPHE 161 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHH--HHHHHc-CCC---hHHhcCCccc
Confidence 87543 577899999998 4775 59999997542 1223333322211 122222 121 1234566788
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEE
Q 000830 521 LSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIV 597 (1265)
Q Consensus 521 LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~ 597 (1265)
||||||||++|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|+
T Consensus 162 LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~iv 241 (331)
T PRK15079 162 FSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAV 241 (331)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 8999999999999976 9999999999999
Q ss_pred EeeCcchhccCCchHHHH
Q 000830 598 KTGSHEELISNPNSAYAA 615 (1265)
Q Consensus 598 ~~g~~~~l~~~~~~~~~~ 615 (1265)
+.|+.+++..++...|.+
T Consensus 242 e~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 242 ELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred EEcCHHHHHcCCCCHHHH
Confidence 999999998776566654
No 266
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-41 Score=379.59 Aligned_cols=220 Identities=30% Similarity=0.489 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 1089 (1265)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5999999999963 358999999999999999999999999999999999865 789999999999865 345
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD--GA-S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|++++|+||++.+|.+|++||+.++.. .. . ++.+.++++..++.+.+ .........+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccCCHHHH
Confidence 567899999999999999999999986421 11 1 23345555555443211 1223445668999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999998865 999999999999999999999
Q ss_pred hhcCC
Q 000830 1242 VENED 1246 (1265)
Q Consensus 1242 l~~~~ 1246 (1265)
.++..
T Consensus 251 ~~~~~ 255 (268)
T PRK14248 251 FTSPK 255 (268)
T ss_pred HhCCC
Confidence 87543
No 267
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-41 Score=367.99 Aligned_cols=199 Identities=30% Similarity=0.533 Sum_probs=173.3
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEE
Q 000830 1019 ELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIAL 1098 (1265)
Q Consensus 1019 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~ 1098 (1265)
+++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ...|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999641 358999999999999999999999999999999999999999999999998864 457789999
Q ss_pred EecCC--CCCcccHHHHhccCCCCC--CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000830 1099 VQQEP--ALFATSIYENILYGKDGA--SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKN 1174 (1265)
Q Consensus 1099 VpQdp--~LF~gTIreNl~~g~~~~--sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~ 1174 (1265)
+||+| .+|..|++||+.++.... .++++.++++..++.++..+.| ..||||||||++|||||+++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99998 467889999998754322 2356777788877766544433 46999999999999999999
Q ss_pred CCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEE
Q 000830 1175 PEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKII 1233 (1265)
Q Consensus 1175 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Iv 1233 (1265)
|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999874 57899999999999976 9999999999985
No 268
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.1e-41 Score=374.30 Aligned_cols=216 Identities=28% Similarity=0.488 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH-Hhccc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS-LRKHI 1096 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~i 1096 (1265)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 578999999963 35899999999999999999999999999999999999999999999999998877655 45789
Q ss_pred EEEecCCCCCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000830 1097 ALVQQEPALFAT-SIYENILYGKD--GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLK 1173 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~~--~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr 1173 (1265)
+|+||++.+|.+ |++||+.++.. ....++..+ .+.++++.+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999987 99999986432 112222111 123334443 45545556667899999999999999999
Q ss_pred CCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1174 NPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1174 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 47899999999988766 99999999999999999999865
No 269
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-41 Score=368.08 Aligned_cols=203 Identities=28% Similarity=0.492 Sum_probs=177.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++||+++|++ .++|+|+||+|++| ++||+||||||||||+++|.|+++|++|+|.++|.++.+.+ ..+|++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 579999999963 35899999999999 99999999999999999999999999999999999998776 77899999
Q ss_pred EEecCCCCCcc-cHHHHhccCC--CCCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFAT-SIYENILYGK--DGAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~--~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||+|.+|.+ |++||+.+.. ...+ ++++.++++..++.++.+ +. ..+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-------KK----IGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-------Cc----hhhCCHHHHHHHHHHHH
Confidence 99999999986 9999997631 1111 245566677776655432 32 34699999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
|+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. |||+++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998777999999999999975 9999999999999865
No 270
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-41 Score=378.97 Aligned_cols=220 Identities=33% Similarity=0.531 Sum_probs=184.9
Q ss_pred cccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCC--C
Q 000830 379 SGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKG--L 451 (1265)
Q Consensus 379 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~ 451 (1265)
.+.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999963 3599999999999999999999999999999999999975 89999999999864 3
Q ss_pred ChHHHhhheeEEccCCccccccHHHHhccCCC--CC--CH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCCh
Q 000830 452 DLKWLRQQIGLVNQEPALFATTIRENILYGKD--DA--TM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSG 523 (1265)
Q Consensus 452 ~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~--~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 523 (1265)
+...+|+.++||+|++.+|+.|+.||+.++.. .. .. +++.++++..+ +++.+.+.....+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAG-------LWEEVKDRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcC-------CchhhhHHhhCCcccCCH
Confidence 45677889999999999998899999987531 10 11 12222333322 222122344567789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCc
Q 000830 524 GQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSH 602 (1265)
Q Consensus 524 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 602 (1265)
|||||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988778899999999999865 999999999999999999
Q ss_pred chhccC
Q 000830 603 EELISN 608 (1265)
Q Consensus 603 ~~l~~~ 608 (1265)
+++...
T Consensus 247 ~~~~~~ 252 (267)
T PRK14235 247 EKMFTN 252 (267)
T ss_pred HHHHhC
Confidence 988754
No 271
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-41 Score=377.38 Aligned_cols=227 Identities=33% Similarity=0.502 Sum_probs=190.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCCC--CH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKRL--NL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~l 1089 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 3589999999999999999999999999999999999984 899999999998753 34
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC---CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD---GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~---~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|++++|+||+|.+|..|++||+.++.. ... ++++.++++..++.+.+. ........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVK-------SELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhH-------HHHhCChhhcCHHHH
Confidence 567889999999999999999999986421 111 233555666666543322 224455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998765 999999999999999999999
Q ss_pred hhcCCcHHHHHH
Q 000830 1242 VENEDGAYFKLI 1253 (1265)
Q Consensus 1242 l~~~~g~f~~l~ 1253 (1265)
.++....|.+.+
T Consensus 233 ~~~~~~~~~~~~ 244 (250)
T PRK14262 233 VERPKNKLTEEY 244 (250)
T ss_pred HhCCCChHHHHH
Confidence 875444455443
No 272
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.1e-41 Score=392.10 Aligned_cols=209 Identities=32% Similarity=0.474 Sum_probs=178.6
Q ss_pred ccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCc----ccCCCCHHHH---h-cccEEEecCCCC
Q 000830 1034 VIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGI----DIKRLNLKSL---R-KHIALVQQEPAL 1105 (1265)
Q Consensus 1034 ~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~----di~~~~l~~l---R-~~i~~VpQdp~L 1105 (1265)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. |+...+...+ | ++++||||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5799999999999999999999999999999999999999999999996 6777765554 3 589999999999
Q ss_pred Cc-ccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEE
Q 000830 1106 FA-TSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEIL 1178 (1265)
Q Consensus 1106 F~-gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~IL 1178 (1265)
|+ .|++||+.++.. ..+. +...++++.+++.++.+.. ..+||||||||++|||||+++|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~-----------~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKK-----------PGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 97 799999987631 1222 3456667777665554333 3469999999999999999999999
Q ss_pred EEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCCcHHHHHH
Q 000830 1179 LLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENEDGAYFKLI 1253 (1265)
Q Consensus 1179 lLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l~ 1253 (1265)
|||||||+||+.+.+.+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|++++++.++.+.|.+.+
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~~~ 264 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVADF 264 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHHHH
Confidence 99999999999999999999998764 7899999999999855 999999999999999999999876555555443
No 273
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=7.2e-41 Score=374.19 Aligned_cols=220 Identities=35% Similarity=0.586 Sum_probs=183.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCC--------
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLN-------- 1088 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~-------- 1088 (1265)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 3899999999963 35899999999999999999999999999999999999999999999999987542
Q ss_pred HHHHhcccEEEecCCCCCc-ccHHHHhccCC---CCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000830 1089 LKSLRKHIALVQQEPALFA-TSIYENILYGK---DGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQR 1164 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~-gTIreNl~~g~---~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQr 1164 (1265)
...+|++++||||++.+|. .|++||+.++. .....++..+. +.+.++.+ |++........+||||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~Gq~qr 152 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATAR-----ARELLAKV--GLAGKETSYPRRLSGGQQQR 152 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCcchhhCChhhCChHHHHH
Confidence 3567889999999999886 69999997641 11222222111 12233333 44433445567899999999
Q ss_pred HHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1165 VAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR-KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1165 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 153 VAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998764 7899999999999976 9999999999999999999987
Q ss_pred hcCC
Q 000830 1243 ENED 1246 (1265)
Q Consensus 1243 ~~~~ 1246 (1265)
+...
T Consensus 233 ~~~~ 236 (250)
T PRK11264 233 ADPQ 236 (250)
T ss_pred cCCC
Confidence 6443
No 274
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.9e-41 Score=393.00 Aligned_cols=214 Identities=25% Similarity=0.474 Sum_probs=185.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|+++..++...++++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999998888999999
Q ss_pred eEEccCCcc-ccccHHHHhccCCCCC-------C---HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHH
Q 000830 461 GLVNQEPAL-FATTIRENILYGKDDA-------T---MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRI 529 (1265)
Q Consensus 461 ~~v~Q~~~l-f~~ti~~ni~~~~~~~-------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 529 (1265)
+||+|++.+ |+.|++||+.+++... . .+.+.++++..++. ........+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~-----------~~~~~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVA-----------QFADRPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCc-----------hhhcCChhhCCHHHHHHH
Confidence 999999987 5669999999875211 1 12233333333332 223445678999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 530 AISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 530 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
+|||||+++|++|||||||++||+.++..+++.|+++. +++|+|++||+++.+.. ||++++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999885 48999999999999965 99999999999999999999886
Q ss_pred C
Q 000830 608 N 608 (1265)
Q Consensus 608 ~ 608 (1265)
.
T Consensus 229 ~ 229 (402)
T PRK09536 229 A 229 (402)
T ss_pred c
Confidence 4
No 275
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=377.33 Aligned_cols=220 Identities=32% Similarity=0.500 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC--C---CCcEEEECCcccCCC--CH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD--P---TAGKVMVDGIDIKRL--NL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~~--~l 1089 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 358999999999999999999999999999999999954 6 489999999998643 34
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD--GA-S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|+.++||||+|.+|+.|++||+.++.. .. . ++++.++++.+++.+.+. +.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1 233445555555543222 234455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+++|++|||||||++||+++...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999999865 999999999999999999999
Q ss_pred hhcCC
Q 000830 1242 VENED 1246 (1265)
Q Consensus 1242 l~~~~ 1246 (1265)
.+++.
T Consensus 235 ~~~~~ 239 (252)
T PRK14239 235 FMNPK 239 (252)
T ss_pred HhCCC
Confidence 87543
No 276
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-41 Score=375.60 Aligned_cols=225 Identities=30% Similarity=0.493 Sum_probs=189.2
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC--C---CCcEEEECCcccCCC--
Q 000830 1015 EGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD--P---TAGKVMVDGIDIKRL-- 1087 (1265)
Q Consensus 1015 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~~-- 1087 (1265)
+|.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 367999999999963 358999999999999999999999999999999999986 4 689999999998653
Q ss_pred CHHHHhcccEEEecCCCCCc-ccHHHHhccCCC--C-CC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCCh
Q 000830 1088 NLKSLRKHIALVQQEPALFA-TSIYENILYGKD--G-AS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSG 1159 (1265)
Q Consensus 1088 ~l~~lR~~i~~VpQdp~LF~-gTIreNl~~g~~--~-~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSg 1159 (1265)
+...+|++++|+||++.+|. .|++||+.++.. . .+ ++++.++++..++.+.+.. .......+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKD-------RLKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcCcCCH
Confidence 45567899999999999997 599999976421 1 11 2334555556665443321 23345668999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecCh
Q 000830 1160 GQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTH 1238 (1265)
Q Consensus 1160 GQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~ 1238 (1265)
|||||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998878899999999999865 999999999999999999
Q ss_pred hhhhhcCCcHH
Q 000830 1239 SSLVENEDGAY 1249 (1265)
Q Consensus 1239 ~eLl~~~~g~f 1249 (1265)
+++..++...|
T Consensus 232 ~~~~~~~~~~~ 242 (252)
T PRK14256 232 KKIFTTPEKKQ 242 (252)
T ss_pred HHHHhCCCcHH
Confidence 99987554443
No 277
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-41 Score=380.73 Aligned_cols=216 Identities=30% Similarity=0.539 Sum_probs=189.4
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCC---cEEEECCcccCCCCHHHH
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTA---GKVMVDGIDIKRLNLKSL 1092 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~---G~I~idG~di~~~~l~~l 1092 (1265)
+.|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 469999999999742 2358999999999999999999999999999999999999987 899999999988777788
Q ss_pred hcccEEEecCC--CCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000830 1093 RKHIALVQQEP--ALFATSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQR 1164 (1265)
Q Consensus 1093 R~~i~~VpQdp--~LF~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQr 1164 (1265)
|++++||||+| .+++.|++|||.++.. ..+. +.+.++++..++.++....| .+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHH
Confidence 99999999998 4678899999987522 2333 33566677777766554443 5899999999
Q ss_pred HHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhh
Q 000830 1165 VAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1165 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
++|||||+.+|++|||||||++||+.+...+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|+++++.
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998764 78999999999999889999999999999999999887
Q ss_pred h
Q 000830 1243 E 1243 (1265)
Q Consensus 1243 ~ 1243 (1265)
.
T Consensus 232 ~ 232 (282)
T PRK13640 232 S 232 (282)
T ss_pred c
Confidence 5
No 278
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=394.99 Aligned_cols=218 Identities=31% Similarity=0.504 Sum_probs=182.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...++. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 3589999999999999999999999999999999999999999999999999766543 4679
Q ss_pred eEEccCCccccc-cHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
+||+|++.+|+. |++||+.|+... ...++..+ .+.+.++.+ |++........+||||||||++|||||+.
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~ 150 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVA 150 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999976 999999987431 12222111 111222222 23334455667899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCc
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPN 610 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 610 (1265)
+|++||||||||+||+.+++.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 151 ~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 151 EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 9999999999999999999999999988743 8999999999998865 99999999999999999999876643
No 279
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-41 Score=369.56 Aligned_cols=209 Identities=27% Similarity=0.488 Sum_probs=180.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 3589999999999999999999999999999999999999999999999988753 356788999
Q ss_pred EEecCCCCCcc-cHHHHhccCCC--CC----CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFAT-SIYENILYGKD--GA----SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~~--~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||++.+|.. |+++|+.++.. .. .++++.++++..++.++.... ..+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRL-----------VKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999998875 99999976311 11 123456666666665544332 34799999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
++.+|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999999998753 6899999999999876 999999999999999998875
No 280
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-41 Score=379.28 Aligned_cols=221 Identities=30% Similarity=0.461 Sum_probs=190.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5999999999963 3689999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEecCCCCCcc-cHHHHhccCCC----------CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1097 ALVQQEPALFAT-SIYENILYGKD----------GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~~----------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
+|+||++.+|.+ |++||+.++.. ...++++.++++.+++.++....| .+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHH
Confidence 999999877655 99999986521 012345677777777765544332 46999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
+|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 999999999999999999999999999999999998753 7899999999999965 9999999999999999999987
Q ss_pred hcCCcHHHHHH
Q 000830 1243 ENEDGAYFKLI 1253 (1265)
Q Consensus 1243 ~~~~g~f~~l~ 1253 (1265)
+ ......++
T Consensus 237 ~--~~~~~~~~ 245 (265)
T PRK10575 237 R--GETLEQIY 245 (265)
T ss_pred C--HHHHHHHh
Confidence 5 23344444
No 281
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-41 Score=379.47 Aligned_cols=216 Identities=31% Similarity=0.518 Sum_probs=184.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.++++||+++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999642 34599999999999999999999999999999999999999999999999999888777788899
Q ss_pred eEEccCC--ccccccHHHHhccCCCC--CCHHH----HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 461 GLVNQEP--ALFATTIRENILYGKDD--ATMEE----ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 461 ~~v~Q~~--~lf~~ti~~ni~~~~~~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
+|++|++ .+++.|++|||.++... .+.++ +.++++..+ ++..+.....+||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~g-----------L~~~~~~~~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVG-----------MEDFLNREPHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcC-----------ChhhhhCCcccCCHHHHHHHHHH
Confidence 9999998 45677999999886321 12222 223333333 23334455568999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|||+.+|++|||||||++||+.+...+.+.|.++.+ |+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998764 7999999999999988999999999999999999888764
No 282
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-41 Score=361.38 Aligned_cols=217 Identities=31% Similarity=0.537 Sum_probs=189.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCc---ccCCCCHHHHh
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGI---DIKRLNLKSLR 1093 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~---di~~~~l~~lR 1093 (1265)
.|.+++++..|+. .++++|||++|+.||.+|+.||||||||||++++.|+..|++|+|.+||. |.++.. .-.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 3788899998864 45899999999999999999999999999999999999999999999999 777643 344
Q ss_pred cccEEEecCCCCCc-ccHHHHhccCCC----CC----CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000830 1094 KHIALVQQEPALFA-TSIYENILYGKD----GA----SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQR 1164 (1265)
Q Consensus 1094 ~~i~~VpQdp~LF~-gTIreNl~~g~~----~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQr 1164 (1265)
++||+|+|+..||. .||++||+||.. .. ....+.+-++.+++..+-+.-| .+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHH
Confidence 78999999999985 699999999952 11 2345566677777776666555 5799999999
Q ss_pred HHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1165 VAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1165 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
+||||||..+|++|+||||.++||++-.+.+++.|++... +.|+++|||+.+.+.. ||||+||++|+|.+.|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999999764 7899999999999876 999999999999999999999
Q ss_pred hhcCCcHH
Q 000830 1242 VENEDGAY 1249 (1265)
Q Consensus 1242 l~~~~g~f 1249 (1265)
...+++.|
T Consensus 226 ~~~P~s~f 233 (345)
T COG1118 226 YDHPASRF 233 (345)
T ss_pred hcCCCccc
Confidence 88777655
No 283
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-41 Score=392.32 Aligned_cols=222 Identities=32% Similarity=0.548 Sum_probs=184.7
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
..|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.+.++ .+++
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 358999999999999999999999999999999999999999999999999977654 4678
Q ss_pred eeEEccCCccccc-cHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
||||+|++.||+. ||+|||.|+... .+..+..+ +.. +.++.+ |+.........+||||||||+||||||+
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~--~v~---~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL~ 165 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS--RVN---EMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSLA 165 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH--HHH---HHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHh
Confidence 9999999999986 999999987431 12222211 111 122222 2333445566789999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCchHH
Q 000830 537 KNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNSAY 613 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 613 (1265)
.+|++||||||||+||+.++..+.+.|+++. .+.|+|+|||+++++.. ||+|++|++|++++.|+++|+..++...|
T Consensus 166 ~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~ 245 (377)
T PRK11607 166 KRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRY 245 (377)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHH
Confidence 9999999999999999999999998887764 37999999999998755 99999999999999999999987755433
No 284
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.6e-41 Score=376.77 Aligned_cols=219 Identities=32% Similarity=0.509 Sum_probs=185.2
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCC-------
Q 000830 1015 EGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRL------- 1087 (1265)
Q Consensus 1015 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~------- 1087 (1265)
++.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (257)
T PRK10619 3 ENKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQL 79 (257)
T ss_pred CccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccc
Confidence 457999999999963 4589999999999999999999999999999999999999999999999988642
Q ss_pred ------CHHHHhcccEEEecCCCCCcc-cHHHHhccCC---CCCCH----HHHHHHHHHhchHHHHHhCCCCccccccCC
Q 000830 1088 ------NLKSLRKHIALVQQEPALFAT-SIYENILYGK---DGASE----GEVIEAAKLANAHSFISALPEGYSTKVGER 1153 (1265)
Q Consensus 1088 ------~l~~lR~~i~~VpQdp~LF~g-TIreNl~~g~---~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~ 1153 (1265)
....+|++++||||++.+|.. |++||+.++. ..... +++.++++..++.+.. ....
T Consensus 80 ~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~ 149 (257)
T PRK10619 80 KVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKY 149 (257)
T ss_pred ccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCC
Confidence 135678899999999999975 9999997631 11122 2344445444443322 1345
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCE
Q 000830 1154 GVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGK 1231 (1265)
Q Consensus 1154 G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~ 1231 (1265)
...||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|+
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 56899999999999999999999999999999999999999999999875 47999999999999987 99999999999
Q ss_pred EEEecChhhhhhcCC
Q 000830 1232 IIEQGTHSSLVENED 1246 (1265)
Q Consensus 1232 Ive~Gt~~eLl~~~~ 1246 (1265)
+++.|+++++.+...
T Consensus 230 i~~~~~~~~~~~~~~ 244 (257)
T PRK10619 230 IEEEGAPEQLFGNPQ 244 (257)
T ss_pred EEEeCCHHHhhhCcc
Confidence 999999999976443
No 285
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-41 Score=374.55 Aligned_cols=220 Identities=32% Similarity=0.503 Sum_probs=183.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCCCChHH
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKGLDLKW 455 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~~ 455 (1265)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999964 3589999999999999999999999999999999999984 6999999999998877788
Q ss_pred HhhheeEEccCCccc-cccHHHHhccCCCC----CCHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 456 LRQQIGLVNQEPALF-ATTIRENILYGKDD----ATME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 456 ~r~~i~~v~Q~~~lf-~~ti~~ni~~~~~~----~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
+|+.|+|++|++.+| ..|++||+.++... .... ++.++++..+ +++..+......+.+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQ-------LWDEVKDRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcC-------CCcchhhhhcCCcccCCHHHH
Confidence 889999999999766 46999999876321 1111 2222222222 221112234556678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999998
Q ss_pred ccCCc
Q 000830 606 ISNPN 610 (1265)
Q Consensus 606 ~~~~~ 610 (1265)
.+.+.
T Consensus 233 ~~~~~ 237 (250)
T PRK14247 233 FTNPR 237 (250)
T ss_pred HcCCc
Confidence 76543
No 286
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-41 Score=369.14 Aligned_cols=207 Identities=39% Similarity=0.603 Sum_probs=172.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999964 359999999999999999999999999999999999999999999999999876443 467899
Q ss_pred EEccCCcccc-ccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 462 LVNQEPALFA-TTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 462 ~v~Q~~~lf~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
||+|++.+|. .|++||+.++... ...++..+ .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~ 148 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRA-----RVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALARE 148 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999886 4999999876321 11111111 112223332 344445556678999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEee
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 600 (1265)
|++|||||||++||+.+...+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 149 PSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999875 38999999999998865 9999999999998765
No 287
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.3e-41 Score=365.95 Aligned_cols=203 Identities=28% Similarity=0.472 Sum_probs=178.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.+||.++... ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999963 3689999999999999999999999999999999999999999999999998764 56788999
Q ss_pred EEecCCCCC-cccHHHHhccCC--CCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000830 1098 LVQQEPALF-ATSIYENILYGK--DGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKN 1174 (1265)
Q Consensus 1098 ~VpQdp~LF-~gTIreNl~~g~--~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~ 1174 (1265)
||||++.+| ..|++||+.++. ...+++++.++++..++.+...+ ....||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKK-----------KVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhh-----------hHhhCCHHHHHHHHHHHHHhcC
Confidence 999999888 579999997642 12345677778888877665433 2357999999999999999999
Q ss_pred CCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1175 PEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1175 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999875 47899999999999976 9999999999999865
No 288
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.9e-41 Score=382.85 Aligned_cols=214 Identities=30% Similarity=0.541 Sum_probs=183.6
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcc
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKH 1095 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 1095 (1265)
..|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 46999999999963 46899999999999999999999999999999999999999999999999997754 457899
Q ss_pred cEEEecCCCCCc-ccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1096 IALVQQEPALFA-TSIYENILYGKD--GASEGE----VIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1096 i~~VpQdp~LF~-gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
++|+||++.+|. .|++||+.+... ..+..+ +.++++..+ +++..+++++ +||||||||++||
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~----~LS~G~~qrl~la 150 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAK-------LENKADAKVG----ELSGGMKRRLTLA 150 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchHhcCchh----hCCHHHHHHHHHH
Confidence 999999999886 699999975321 223332 223333333 3344555554 6999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
|||+.+|++|+|||||++||+.+.+.+++.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 151 ~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 151 RALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999999999975 47899999999999976 999999999999999999999763
No 289
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-41 Score=385.22 Aligned_cols=227 Identities=28% Similarity=0.457 Sum_probs=189.1
Q ss_pred cEEEEeEEEECCCCC-------CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCH
Q 000830 1017 TIELRGVHFSYPSRP-------EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~-------~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l 1089 (1265)
.|+++|++++|+.+. ...+|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999997321 2468999999999999999999999999999999999999999999999999988864
Q ss_pred H---HHhcccEEEecCCC--CCc-ccHHHHhccC---CCCCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCC
Q 000830 1090 K---SLRKHIALVQQEPA--LFA-TSIYENILYG---KDGAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQ 1156 (1265)
Q Consensus 1090 ~---~lR~~i~~VpQdp~--LF~-gTIreNl~~g---~~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~ 1156 (1265)
. .+|++|+||||+|. |+. -|+.+|+..+ ..... .+.+.++++.+++.+ ..++. ....
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~----~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDR----YPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcC----CCcc
Confidence 3 57889999999994 554 4898888532 11122 234556666665532 12333 3457
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEE
Q 000830 1157 LSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKII 1233 (1265)
Q Consensus 1157 LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Iv 1233 (1265)
||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998754 7899999999999976 9999999999999
Q ss_pred EecChhhhhhcCCcHHHHHH
Q 000830 1234 EQGTHSSLVENEDGAYFKLI 1253 (1265)
Q Consensus 1234 e~Gt~~eLl~~~~g~f~~l~ 1253 (1265)
|.|++++++++....|.+.+
T Consensus 235 e~g~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQAL 254 (327)
T ss_pred EECCHHHHhcCCCCHHHHHH
Confidence 99999999986666676543
No 290
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.1e-41 Score=370.47 Aligned_cols=204 Identities=36% Similarity=0.521 Sum_probs=172.2
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH----H
Q 000830 1018 IELRGVHFSYPSRP-EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS----L 1092 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~----l 1092 (1265)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999997421 146899999999999999999999999999999999999999999999999998776432 4
Q ss_pred hcccEEEecCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1093 RKHIALVQQEPALFAT-SIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1093 R~~i~~VpQdp~LF~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
|++++|+||+|.+|.+ |++||+.++.. ... ++++.++++..++ +........+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGL-----------GDRLNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCC-----------chhhhcChhhcCHHHHHHH
Confidence 6789999999999976 99999987532 111 1234444444444 3334444568999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEeCCEE
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIESGKI 1232 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~~G~I 1232 (1265)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998764 7899999999999888999999999974
No 291
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-41 Score=378.44 Aligned_cols=213 Identities=31% Similarity=0.539 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCC-HHHHhccc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLN-LKSLRKHI 1096 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~-l~~lR~~i 1096 (1265)
|+++||+++|++ ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+++++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 235899999999999999999999999999999999999999999999999998765 46788899
Q ss_pred EEEecCCC--CCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1097 ALVQQEPA--LFATSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1097 ~~VpQdp~--LF~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
+|+||+|. ++..|++||+.++.. ..+. +++.++++..++.++. ......||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYR-----------HRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-----------cCCcccCCHHHHHHHHHH
Confidence 99999985 677899999987532 1222 3344555555554443 334467999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhh
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||+.+|+||||||||++||+.+...+++.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999875 4789999999999998899999999999999999999865
No 292
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.7e-41 Score=370.17 Aligned_cols=215 Identities=29% Similarity=0.481 Sum_probs=177.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++||+++|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... ...++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEE
Confidence 5789999999642 14699999999999999999999999999999999999999999999999998654 356778899
Q ss_pred EEccCCcccc-ccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 462 LVNQEPALFA-TTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 462 ~v~Q~~~lf~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
||+|++.+|. .|++||+.++.. ....++..+ .+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGG 151 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 9999999985 699999987421 111211111 111222222 222233445568999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 152 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 152 PSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999988778999999999999865 999999999999999988765
No 293
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-41 Score=360.06 Aligned_cols=223 Identities=36% Similarity=0.552 Sum_probs=189.9
Q ss_pred cEEEEeEEEECCCCCC---------------------CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcc
Q 000830 381 HIEFKDVSFCYPSRPD---------------------VAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSG 439 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~---------------------~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 439 (1265)
.|+++||++-|++++. ..-++|+||+++.||+..|.|-||||||||++++.|+++|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 5888899888864321 1247899999999999999999999999999999999999999
Q ss_pred eEEECCeeCCCCChHHHh----hheeEEccCCccccc-cHHHHhccCCCCC------CHHHHHHHHHHhcHHHHHhcCcc
Q 000830 440 EILLDGNNIKGLDLKWLR----QQIGLVNQEPALFAT-TIRENILYGKDDA------TMEEITRAAKLSEAMSFISNLPE 508 (1265)
Q Consensus 440 ~i~~~g~~~~~~~~~~~r----~~i~~v~Q~~~lf~~-ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~ 508 (1265)
+|+++|.|+..++.++|| +++++|+|+.-|++- ||.||..||.+-. +.+...++.+..++.++-.
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~---- 159 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYAD---- 159 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhh----
Confidence 999999999999987764 579999999999976 9999999997532 2223344445555444433
Q ss_pred cccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-cc
Q 000830 509 RFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIR-NA 585 (1265)
Q Consensus 509 g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~ 585 (1265)
..+.+||||+||||.|||||..+|+|||+|||+|||||--+...|+.|.++.+ +||+|+|||++++.- -.
T Consensus 160 -------~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 160 -------KYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -------cCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 44567999999999999999999999999999999999999999999887753 799999999999864 59
Q ss_pred CEEEEEeCCEEEEeeCcchhccCCchHHH
Q 000830 586 DVIAVVQGRKIVKTGSHEELISNPNSAYA 614 (1265)
Q Consensus 586 d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 614 (1265)
|||..|++|+|+..||++|++.+|...|-
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV 261 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYV 261 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHH
Confidence 99999999999999999999988776664
No 294
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-41 Score=375.75 Aligned_cols=220 Identities=32% Similarity=0.542 Sum_probs=184.7
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCC--CC
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKG--LD 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 452 (1265)
..|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 46999999999963 358999999999999999999999999999999999987 699999999998853 45
Q ss_pred hHHHhhheeEEccCCccccccHHHHhccCCCCC--C---HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHH
Q 000830 453 LKWLRQQIGLVNQEPALFATTIRENILYGKDDA--T---MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQ 527 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 527 (1265)
...+|++++||+|++.+|..|++||+.++.... . .+++.++++..+ +..++++.......+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAA-------VWDECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhC-------CcchhhhhhCCCcccCCHHHHH
Confidence 667888999999999999889999999864311 1 112222222222 2223334456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeC-----------CE
Q 000830 528 RIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQG-----------RK 595 (1265)
Q Consensus 528 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~-----------G~ 595 (1265)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999988778999999999998865 999999996 67
Q ss_pred EEEeeCcchhccCC
Q 000830 596 IVKTGSHEELISNP 609 (1265)
Q Consensus 596 i~~~g~~~~l~~~~ 609 (1265)
+++.|+.+++...+
T Consensus 242 ~~~~~~~~~~~~~~ 255 (269)
T PRK14259 242 LVEFNETKKIFNSP 255 (269)
T ss_pred EEEeCCHHHHHhCc
Confidence 99999999987653
No 295
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-41 Score=380.48 Aligned_cols=218 Identities=34% Similarity=0.526 Sum_probs=179.7
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH----hh
Q 000830 383 EFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL----RQ 458 (1265)
Q Consensus 383 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~ 458 (1265)
.++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 45688888853 458999999999999999999999999999999999999999999999999887765443 45
Q ss_pred heeEEccCCcccc-ccHHHHhccCCCC--CCH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 459 QIGLVNQEPALFA-TTIRENILYGKDD--ATM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~-~ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
+++|++|++.+|+ .|++||+.++... ... +++.++++..+ ++........+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVG-----------LEGWEHKYPDELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------CHhHhhCCcccCCHHHHHHHHH
Confidence 7999999999986 5999999875321 111 12222233222 3333445556899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
||||+.+|+||||||||++||+.+...+.+.|.++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999998874 37999999999998865 999999999999999999998765
Q ss_pred CchHHH
Q 000830 609 PNSAYA 614 (1265)
Q Consensus 609 ~~~~~~ 614 (1265)
+...|.
T Consensus 252 ~~~~~~ 257 (269)
T cd03294 252 PANDYV 257 (269)
T ss_pred cCcHHH
Confidence 444443
No 296
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.5e-41 Score=362.35 Aligned_cols=200 Identities=37% Similarity=0.569 Sum_probs=179.7
Q ss_pred EEEEeEEEECCCCCC--CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 382 IEFKDVSFCYPSRPD--VAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
++++||+++|++..+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 578999999975321 3599999999999999999999999999999999999999999999998 5
Q ss_pred eeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000830 460 IGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNP 539 (1265)
Q Consensus 460 i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 539 (1265)
|+|++|+|.+|+.|++||+.++.. ...++..++++..++.+++..+|.|+++.+++++.+||||||||++|||||+.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998753 2345666777777888899999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHH-HHHHHc-CCCeEEEEccCchhhhccCEEEEEeCCE
Q 000830 540 SILLLDEATSALDAESENSVQE-ALDRVM-VGRTTVVVAHRLSTIRNADVIAVVQGRK 595 (1265)
Q Consensus 540 ~illlDE~ts~lD~~~~~~i~~-~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~ 595 (1265)
+++||||||++||+++.+.+.+ .+.+.. +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 455553 4799999999999998899999999985
No 297
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-41 Score=376.73 Aligned_cols=223 Identities=30% Similarity=0.467 Sum_probs=189.3
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCC--CC
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKR--LN 1088 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~ 1088 (1265)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 36999999999963 3589999999999999999999999999999999999985 48999999999864 44
Q ss_pred HHHHhcccEEEecCCCCCcccHHHHhccCCC---CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhH
Q 000830 1089 LKSLRKHIALVQQEPALFATSIYENILYGKD---GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQ 1161 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~---~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1161 (1265)
...+|++++|+||+|.+|+.|++||+.++.. ..+ ++.+.++++.+++.+++.. .....+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 5678899999999999999999999976421 111 2335566667776544332 2234556899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEe-----CCEEEEe
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIE-----SGKIIEQ 1235 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~-----~G~Ive~ 1235 (1265)
|||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998778999999999999976 99999998 5999999
Q ss_pred cChhhhhhcCCcH
Q 000830 1236 GTHSSLVENEDGA 1248 (1265)
Q Consensus 1236 Gt~~eLl~~~~g~ 1248 (1265)
|+++++.+++...
T Consensus 236 ~~~~~~~~~~~~~ 248 (259)
T PRK14260 236 GVTTQIFSNPLDS 248 (259)
T ss_pred CCHHHHhcCCCCh
Confidence 9999997644433
No 298
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.6e-41 Score=373.88 Aligned_cols=222 Identities=23% Similarity=0.451 Sum_probs=183.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH-Hhcc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS-LRKH 1095 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~ 1095 (1265)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.
T Consensus 2 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 3789999999963 35899999999999999999999999999999999999999999999999998877665 4567
Q ss_pred cEEEecCCCCCcc-cHHHHhccCCCCCCH--HH---HHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1096 IALVQQEPALFAT-SIYENILYGKDGASE--GE---VIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1096 i~~VpQdp~LF~g-TIreNl~~g~~~~sd--~e---i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
++|+||++.+|.+ |++||+.++...... .. .........+.++++.+ |++.........||||||||++|||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHH
Confidence 9999999999987 999999875321000 00 00000011123333333 4444445556789999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|++++|++|||||||++||+++...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999999999999999999999999998778999999999999976 99999999999999999999875
No 299
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-41 Score=375.82 Aligned_cols=218 Identities=31% Similarity=0.472 Sum_probs=182.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCC--CCCh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIK--GLDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~--~~~~ 453 (1265)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++. ..+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999964 3599999999999999999999999999999999999987 4999999999986 4455
Q ss_pred HHHhhheeEEccCCccccc-cHHHHhccCCC--C--CCHHH----HHHHHHHhcHHHHHhcCcccccccccCCCCCCChH
Q 000830 454 KWLRQQIGLVNQEPALFAT-TIRENILYGKD--D--ATMEE----ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGG 524 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~-ti~~ni~~~~~--~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 524 (1265)
..+|++++|++|++.+|+. |+.||+.++.. . ...++ +.++++..+ +...+.......+.+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAA-------LWDEVKDRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcC-------CccchhhhhccChhhCCHH
Confidence 6778899999999999976 99999987531 1 01222 222222222 1111223345677899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcc
Q 000830 525 QKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHE 603 (1265)
Q Consensus 525 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 603 (1265)
||||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778999999999999865 9999999999999999999
Q ss_pred hhccC
Q 000830 604 ELISN 608 (1265)
Q Consensus 604 ~l~~~ 608 (1265)
++...
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 98754
No 300
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-41 Score=373.74 Aligned_cols=218 Identities=32% Similarity=0.548 Sum_probs=186.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC-----CcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPT-----AGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--~~l 1089 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 35899999999999999999999999999999999999997 6999999999864 345
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD--GA-S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|+.++||||+|.+|+.|++||+.++.. .. . ++.+.++++..++.+.+. ......+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 678999999999999999999999987521 11 1 123444455555543332 234556778999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667999999999999987 899999999999999999998
Q ss_pred hhc
Q 000830 1242 VEN 1244 (1265)
Q Consensus 1242 l~~ 1244 (1265)
...
T Consensus 234 ~~~ 236 (251)
T PRK14249 234 FSR 236 (251)
T ss_pred HhC
Confidence 764
No 301
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-41 Score=390.53 Aligned_cols=219 Identities=32% Similarity=0.521 Sum_probs=188.4
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcc
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKH 1095 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 1095 (1265)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|++||.++.+.+. .|++
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 358999999999999999999999999999999999999999999999999987664 5789
Q ss_pred cEEEecCCCCCcc-cHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1096 IALVQQEPALFAT-SIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1096 i~~VpQdp~LF~g-TIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
++||+|++.||.. |++||+.++.. ..+. +++.++++..++.++.++. ..+||||||||++||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-----------~~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRK-----------PHQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHH
Confidence 9999999999975 99999998632 2232 3445556666655444333 357999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcC
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENE 1245 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~ 1245 (1265)
|||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 999999999999999999999999999988887653 6899999999999765 9999999999999999999999866
Q ss_pred CcHHH
Q 000830 1246 DGAYF 1250 (1265)
Q Consensus 1246 ~g~f~ 1250 (1265)
...|.
T Consensus 242 ~~~~~ 246 (377)
T PRK11607 242 TTRYS 246 (377)
T ss_pred ccHHH
Confidence 65553
No 302
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-41 Score=376.31 Aligned_cols=222 Identities=27% Similarity=0.511 Sum_probs=183.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCCC--Ch
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKGL--DL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 453 (1265)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|+++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 3589999999999999999999999999999999999985 799999999988643 23
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKD--DATMEE----ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQ 527 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 527 (1265)
..+|+.++|++|++.+|+.|++||+.++.. ....++ +.++++..+ +.+...........+|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAA-------LWDETSDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CCcchhhhhcCChhhCCHHHHH
Confidence 456788999999999999999999987532 112222 222222221 1111123345667789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhc
Q 000830 528 RIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELI 606 (1265)
Q Consensus 528 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 606 (1265)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999865 9999999999999999999987
Q ss_pred cCCchH
Q 000830 607 SNPNSA 612 (1265)
Q Consensus 607 ~~~~~~ 612 (1265)
.++...
T Consensus 242 ~~~~~~ 247 (258)
T PRK14268 242 HNPREK 247 (258)
T ss_pred cCCCCH
Confidence 653333
No 303
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.7e-41 Score=372.32 Aligned_cols=216 Identities=27% Similarity=0.460 Sum_probs=182.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH-hhhe
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL-RQQI 460 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 460 (1265)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.... ++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 478999999963 359999999999999999999999999999999999999999999999999887766543 5679
Q ss_pred eEEccCCccccc-cHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
+|++|++.+|++ |++||+.++.+. ...++..+ .+.+.+..+ |++........+||||||||++|||||+.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999987 999999875321 11111111 122333333 45555667778999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 48999999999987765 99999999999999999988764
No 304
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.7e-41 Score=355.68 Aligned_cols=178 Identities=39% Similarity=0.698 Sum_probs=166.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999753 23589999999999999999999999999999999999999999999999998766 667889999
Q ss_pred EEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000830 1098 LVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEI 1177 (1265)
Q Consensus 1098 ~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1177 (1265)
|+||+|.+|+.|++||+ ..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 357999999999999999999999
Q ss_pred EEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhccCEEEEEeCCEEEEec
Q 000830 1178 LLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKNADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1178 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~G 1236 (1265)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999987789999999999999889999999999998865
No 305
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=6.2e-41 Score=376.96 Aligned_cols=226 Identities=27% Similarity=0.464 Sum_probs=185.2
Q ss_pred EEEEeEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH
Q 000830 1018 IELRGVHFSYPSR------PEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS 1091 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~ 1091 (1265)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 1346899999999999999999999999999999999999999999999999998776543
Q ss_pred ---HhcccEEEecCCC--CC-cccHHHHhccCCC---CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCC
Q 000830 1092 ---LRKHIALVQQEPA--LF-ATSIYENILYGKD---GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLS 1158 (1265)
Q Consensus 1092 ---lR~~i~~VpQdp~--LF-~gTIreNl~~g~~---~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1158 (1265)
+|++++|+||+|. ++ ..|++||+.++.. ... ++++.++++..++.+ .........||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhCC
Confidence 6788999999983 44 4699999864311 111 223344444443321 22344566899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 000830 1159 GGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQ 1235 (1265)
Q Consensus 1159 gGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~ 1235 (1265)
||||||++|||||+.+|++|||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999998764 7899999999999975 999999999999999
Q ss_pred cChhhhhhcCCcHHHHHH
Q 000830 1236 GTHSSLVENEDGAYFKLI 1253 (1265)
Q Consensus 1236 Gt~~eLl~~~~g~f~~l~ 1253 (1265)
|++++++...+..+..+.
T Consensus 233 g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 233 CDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred CCHHHHcCCCCHHHHHHH
Confidence 999999874333344343
No 306
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=375.55 Aligned_cols=223 Identities=26% Similarity=0.449 Sum_probs=188.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCCCC-HH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKRLN-LK 1090 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~~-l~ 1090 (1265)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999973 4689999999999999999999999999999999999986 6999999999987663 45
Q ss_pred HHhcccEEEecCCCCCcccHHHHhccCCC---CCCHHHHHH----HHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1091 SLRKHIALVQQEPALFATSIYENILYGKD---GASEGEVIE----AAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1091 ~lR~~i~~VpQdp~LF~gTIreNl~~g~~---~~sd~ei~~----al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
.+|++++|+||+|.+|..|+++|+.++.. ..+++++.+ .++..++. ..+++.+.....+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLW-------DAVKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCC-------chhhhHhhCCcccCCHHHHH
Confidence 67899999999999999999999987531 134444332 23333332 22223455667789999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
|++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 9999999999999999999998
Q ss_pred hcCCcHH
Q 000830 1243 ENEDGAY 1249 (1265)
Q Consensus 1243 ~~~~g~f 1249 (1265)
+.+...+
T Consensus 251 ~~~~~~~ 257 (276)
T PRK14271 251 SSPKHAE 257 (276)
T ss_pred hCcCcHH
Confidence 7543333
No 307
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=370.06 Aligned_cols=214 Identities=29% Similarity=0.473 Sum_probs=178.2
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH---H
Q 000830 381 HIEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW---L 456 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~ 456 (1265)
.++++||+|+|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997432 146999999999999999999999999999999999999999999999999998877643 3
Q ss_pred h-hheeEEccCCccccc-cHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 457 R-QQIGLVNQEPALFAT-TIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 457 r-~~i~~v~Q~~~lf~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
| +.++|++|++.+|+. |++||+.++.. ....++..+ .+.+.+..+ |++........+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAV--GLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHH
Confidence 3 579999999999876 99999987421 111222111 111223222 344455667789999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhccCEEEEEeCCEEEEeeC
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 601 (1265)
||++.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999874 4899999999999999889999999999998875
No 308
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.5e-41 Score=387.52 Aligned_cols=232 Identities=22% Similarity=0.391 Sum_probs=189.4
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCC---cceEEECCeeCCCCChHHH
Q 000830 381 HIEFKDVSFCYPSR-PDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPL---SGEILLDGNNIKGLDLKWL 456 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~~~~~~~~~~ 456 (1265)
-++++|++++|+.. ...++++|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|+++..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 58999999999642 2346999999999999999999999999999999999999996 9999999999998887665
Q ss_pred h----hheeEEccCC--ccccc-cHHHHhccCC---CCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 457 R----QQIGLVNQEP--ALFAT-TIRENILYGK---DDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 457 r----~~i~~v~Q~~--~lf~~-ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
+ ++|+||+|+| .+++. |+.+|+.... ...+.++..+ +..++.+. ..|+++. ..++..+.+||||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~--~~~~~L~~-vgL~~~~-~~~~~~p~~LSgG~~ 167 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFE--ESVRMLDA-VKMPEAR-KRMKMYPHEFSGGMR 167 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHH-cCCCChH-HHhcCCcccCCHHHH
Confidence 3 4799999998 45553 8888775321 1122222221 11112222 2455443 336778899999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcc
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHE 603 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 603 (1265)
||++|||||+.+|++||+|||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.|+++
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~ 247 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNAR 247 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998854 8999999999999975 9999999999999999999
Q ss_pred hhccCCchHHHHH
Q 000830 604 ELISNPNSAYAAL 616 (1265)
Q Consensus 604 ~l~~~~~~~~~~~ 616 (1265)
++.+++...|.+.
T Consensus 248 ~i~~~p~~pyt~~ 260 (330)
T PRK09473 248 DVFYQPSHPYSIG 260 (330)
T ss_pred HHHhCCCCHHHHH
Confidence 9998776677653
No 309
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-41 Score=374.93 Aligned_cols=221 Identities=30% Similarity=0.470 Sum_probs=189.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 1089 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 5899999999963 358999999999999999999999999999999999986 479999999999853 456
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCCC--C---CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKDG--A---SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQR 1164 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~--~---sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQr 1164 (1265)
..+|++++|+||++.+|+.|++||+.++... . .++++.++++.+++.+.+.. .....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 6788999999999999989999999875321 1 12345556666666554432 2344566899999999
Q ss_pred HHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEe---------CCEEEE
Q 000830 1165 VAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIE---------SGKIIE 1234 (1265)
Q Consensus 1165 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~---------~G~Ive 1234 (1265)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||||++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999999876 99999998 899999
Q ss_pred ecChhhhhhcCCc
Q 000830 1235 QGTHSSLVENEDG 1247 (1265)
Q Consensus 1235 ~Gt~~eLl~~~~g 1247 (1265)
.|+++++.+++..
T Consensus 240 ~~~~~~~~~~~~~ 252 (264)
T PRK14243 240 FDRTEKIFNSPQQ 252 (264)
T ss_pred eCCHHHHHhCCCc
Confidence 9999999864443
No 310
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-41 Score=380.03 Aligned_cols=219 Identities=26% Similarity=0.496 Sum_probs=182.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCC--CCChHHHhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIK--GLDLKWLRQ 458 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~r~ 458 (1265)
.|+++|++|+|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999963 245999999999999999999999999999999999999999999999999984 334567888
Q ss_pred heeEEccCC--ccccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 459 QIGLVNQEP--ALFATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 459 ~i~~v~Q~~--~lf~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
.++|++|+| .+|+.|++||+.++... .+.++..+.. . +.++.+ |+.......+.+||||||||++||||
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~--~---~~l~~~--gL~~~~~~~~~~LS~G~~qrl~lara 155 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRV--D---NALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGV 155 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHH--H---HHHHHC--CChhhhhCCcccCCHHHHHHHHHHHH
Confidence 999999998 57888999999875321 2222221111 1 111221 23334456678999999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-ccCEEEEEeCCEEEEeeCcchhccC
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIR-NADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999988753 899999999999987 4999999999999999999998764
No 311
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.7e-41 Score=384.54 Aligned_cols=218 Identities=27% Similarity=0.477 Sum_probs=182.3
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
..|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 35999999999963 45999999999999999999999999999999999999999999999999987654 457889
Q ss_pred eeEEccCCcccc-ccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 460 IGLVNQEPALFA-TTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 460 i~~v~Q~~~lf~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
||||||++.++. .|++||+.+... ..+..+..+. ..++.+.+ .+++..++.+ .+||||||||++|||||+
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~~l~~~-~l~~~~~~~~----~~LS~G~~qrl~la~aL~ 154 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL--VPPLLEFA-KLENKADAKV----GELSGGMKRRLTLARALV 154 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH--HHHHHHHc-CCchHhcCch----hhCCHHHHHHHHHHHHHh
Confidence 999999999986 499999985321 1222222221 11222222 3444445444 579999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 537 KNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 155 ~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 155 NDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999885 48999999999999976 999999999999999999998643
No 312
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=5.6e-41 Score=377.35 Aligned_cols=228 Identities=28% Similarity=0.422 Sum_probs=184.7
Q ss_pred EEEEeEEEECCCC------CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChH-
Q 000830 382 IEFKDVSFCYPSR------PDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLK- 454 (1265)
Q Consensus 382 i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~- 454 (1265)
|+++||+|+|++. .++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 135699999999999999999999999999999999999999999999999999877654
Q ss_pred --HHhhheeEEccCCc--ccc-ccHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCccccc-ccccCCCCCCChHH
Q 000830 455 --WLRQQIGLVNQEPA--LFA-TTIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFE-TQVGERGIQLSGGQ 525 (1265)
Q Consensus 455 --~~r~~i~~v~Q~~~--lf~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq 525 (1265)
.+|+.|+||+|++. ++. .|++||+.++.. ....++.. ..+.+.++.+ |++ ......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQK-----ARIAELLDMV--GLRSEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCChhhhhCChhhCCHHH
Confidence 36778999999983 444 599999975421 11111111 1122233333 343 23456778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCc
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSH 602 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 602 (1265)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 9999999999999999999999999999999999999998753 8999999999999975 999999999999999999
Q ss_pred chhccCCchHHHHH
Q 000830 603 EELISNPNSAYAAL 616 (1265)
Q Consensus 603 ~~l~~~~~~~~~~~ 616 (1265)
+++....+..++.+
T Consensus 236 ~~~~~~~~~~~~~~ 249 (265)
T TIGR02769 236 AQLLSFKHPAGRNL 249 (265)
T ss_pred HHHcCCCCHHHHHH
Confidence 99987534444444
No 313
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1e-40 Score=370.36 Aligned_cols=217 Identities=33% Similarity=0.561 Sum_probs=182.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCC--CHHHHhcc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRL--NLKSLRKH 1095 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~--~l~~lR~~ 1095 (1265)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 789999999963 3589999999999999999999999999999999999999999999999998764 34567889
Q ss_pred cEEEecCCCCCc-ccHHHHhccCCC---CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000830 1096 IALVQQEPALFA-TSIYENILYGKD---GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAV 1171 (1265)
Q Consensus 1096 i~~VpQdp~LF~-gTIreNl~~g~~---~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARAL 1171 (1265)
++|+||++.+|. .|+++|+.++.. ..+.++..+. +.+.++.+ |++.........||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQ-----ARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHH-----HHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999999886 599999976421 1222222111 12233332 444444445568999999999999999
Q ss_pred ccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1172 LKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1172 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
+++|++|||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++++++++
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999999875 47899999999999975 999999999999999999998764
No 314
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=375.66 Aligned_cols=223 Identities=28% Similarity=0.475 Sum_probs=187.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 1089 (1265)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 6999999999973 358999999999999999999999999999999999987 699999999999853 355
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC--CCCHH-----HHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD--GASEG-----EVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~sd~-----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|++++|+||+|.+|..|++||+.++.. +.+++ .+.++++..++. +++.......+.+||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIW-------DELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc-------chHHHHHhcCcccCCHHHH
Confidence 678899999999999999999999986421 22221 223333333322 1233334556678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999876 999999999999999999999
Q ss_pred hhcCCcHH
Q 000830 1242 VENEDGAY 1249 (1265)
Q Consensus 1242 l~~~~g~f 1249 (1265)
.+++...|
T Consensus 254 ~~~~~~~~ 261 (271)
T PRK14238 254 FSNPSDKR 261 (271)
T ss_pred HcCCCCHH
Confidence 86544333
No 315
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.3e-41 Score=368.03 Aligned_cols=211 Identities=25% Similarity=0.455 Sum_probs=175.5
Q ss_pred EEEEeEEEECCCCCC-CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 382 IEFKDVSFCYPSRPD-VAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
|+++||+++|++... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 259999999999999999999999999999999999999999999999999875 456678899
Q ss_pred eEEccCCccccc-cHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 461 GLVNQEPALFAT-TIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
+|++|++.+|+. |++||+.+... ....++..+ .+.+.++.+ |++......+.+||||||||++||||++.
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhc
Confidence 999999999986 99999976422 112222111 111223322 34445566778899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEee
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 600 (1265)
+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999998875 48999999999998865 9999999999998754
No 316
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-41 Score=376.59 Aligned_cols=215 Identities=31% Similarity=0.495 Sum_probs=186.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999743 23589999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEecCCC--CCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000830 1097 ALVQQEPA--LFATSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIA 1168 (1265)
Q Consensus 1097 ~~VpQdp~--LF~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLA 1168 (1265)
+|+||+|. ++..|+++|+.++.. ..+. +++.++++..++.++. .....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-----------DYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHHHHHH
Confidence 99999994 445689999977532 1222 3445555555554432 234467999999999999
Q ss_pred HHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhh
Q 000830 1169 RAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1169 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
||++.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||||++|++|++++.|+++++.+
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 231 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFD 231 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999999998753 789999999999998899999999999999999999876
No 317
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-41 Score=375.41 Aligned_cols=221 Identities=26% Similarity=0.461 Sum_probs=190.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 46899999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEecCCCCCcc-cHHHHhccCCCC----------CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000830 1098 LVQQEPALFAT-SIYENILYGKDG----------ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~~~----------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrla 1166 (1265)
|+||++.+|.+ |++||+.++... ..++++.++++..++.++.+ .....||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLAD-----------RRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHc-----------CCcccCCHHHHHHHH
Confidence 99999998876 999999875211 11234556666666654433 334579999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
||||++++|++|||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~- 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT- 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC-
Confidence 9999999999999999999999999999999999875 47899999999999875 99999999999999999999875
Q ss_pred CCcHHHHHHH
Q 000830 1245 EDGAYFKLIN 1254 (1265)
Q Consensus 1245 ~~g~f~~l~~ 1254 (1265)
...+.+.+.
T Consensus 228 -~~~~~~~~~ 236 (255)
T PRK11231 228 -PGLLRTVFD 236 (255)
T ss_pred -HHHHHHHhC
Confidence 344555553
No 318
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=9.8e-41 Score=383.85 Aligned_cols=229 Identities=27% Similarity=0.480 Sum_probs=188.8
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC---CcEEEECCcccCCCCHHHH
Q 000830 1017 TIELRGVHFSYPSRP-EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPT---AGKVMVDGIDIKRLNLKSL 1092 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~idG~di~~~~l~~l 1092 (1265)
.++++|++++|+.+. ...+++|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.|+..++.+.+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 589999999996432 246899999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cccEEEecCC--CCCc-ccHHHHhccC---CCCCCHHH----HHHHHHHhchHHHHHhCCCCccccccCCCCCCC
Q 000830 1093 R----KHIALVQQEP--ALFA-TSIYENILYG---KDGASEGE----VIEAAKLANAHSFISALPEGYSTKVGERGVQLS 1158 (1265)
Q Consensus 1093 R----~~i~~VpQdp--~LF~-gTIreNl~~g---~~~~sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1158 (1265)
| ++|+||||+| .++. -|+.+|+... ....+.++ +.+.++.++ +|++. ..++....+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vg-------L~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVK-------MPEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-------CCChH-HHhcCCcccCC
Confidence 3 4899999999 4554 4777776431 11223322 333344333 33332 22456678899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 000830 1159 GGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQ 1235 (1265)
Q Consensus 1159 gGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~ 1235 (1265)
||||||++|||||+.+|++||+|||||+||+.+...|.+.|+++.+ +.|+|+|||+++.+.. ||||+||.+|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998864 7899999999999975 999999999999999
Q ss_pred cChhhhhhcCCcHHHHHH
Q 000830 1236 GTHSSLVENEDGAYFKLI 1253 (1265)
Q Consensus 1236 Gt~~eLl~~~~g~f~~l~ 1253 (1265)
|+++++.+++...|.+.+
T Consensus 244 g~~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 244 GNARDVFYQPSHPYSIGL 261 (330)
T ss_pred CCHHHHHhCCCCHHHHHH
Confidence 999999987777777643
No 319
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-41 Score=370.78 Aligned_cols=218 Identities=25% Similarity=0.410 Sum_probs=181.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH-Hhcc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS-LRKH 1095 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~ 1095 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... +|+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 35899999999999999999999999999999999999999999999999998887654 6788
Q ss_pred cEEEecCCCCCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000830 1096 IALVQQEPALFAT-SIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKN 1174 (1265)
Q Consensus 1096 i~~VpQdp~LF~g-TIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~ 1174 (1265)
++|+||++.+|.+ |+++|+.++....+.++..+.++ +.++.++ +++.........||||||||++||||++++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIK-----WVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHH-----HHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 99999987532222222222211 1112111 111112234567999999999999999999
Q ss_pred CCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1175 PEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1175 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|+||||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999999875 47999999999998765 99999999999999999999975
No 320
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-41 Score=369.47 Aligned_cols=206 Identities=34% Similarity=0.523 Sum_probs=174.8
Q ss_pred EEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1018 IELRGVHFSYPSRPE-VVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
|+++|++++|++... .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 478999999974211 469999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEecCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPALFA-TSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~LF~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
+||||+|.+|. .|++||+.++.. ..+ ++++.++++..++.++..+ ...+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENA-----------YPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------CcccCCHHHHHHHHHHH
Confidence 99999999987 699999976421 111 2345566666665544433 33579999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhc-cCEEEEEe--CCEEEEecChh
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKN-ADQISVIE--SGKIIEQGTHS 1239 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~-~DrI~vl~--~G~Ive~Gt~~ 1239 (1265)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.+
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 9999999999999999999999999999999874 37899999999998865 99999999 79999988643
No 321
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-41 Score=373.98 Aligned_cols=227 Identities=30% Similarity=0.478 Sum_probs=190.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCCC--CH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKRL--NL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~l 1089 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 5899999999963 3589999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD--GA-S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
...|+.++|+||+|.+|+.|++||+.++.. .. . ++.+.++++..++.+. +.+.....+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDE-------VKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchh-------hHHHhhcChhhCCHHHH
Confidence 677889999999999999999999987532 11 1 2234445555444322 22345566778999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++||||++.+|+++||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999999975 999999999999999999999
Q ss_pred hhcCCcHHHHHH
Q 000830 1242 VENEDGAYFKLI 1253 (1265)
Q Consensus 1242 l~~~~g~f~~l~ 1253 (1265)
.+++...+.+.+
T Consensus 236 ~~~~~~~~~~~~ 247 (253)
T PRK14261 236 FENPHEELTENY 247 (253)
T ss_pred HhCCCcHHHHHH
Confidence 865444455444
No 322
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=378.44 Aligned_cols=219 Identities=33% Similarity=0.547 Sum_probs=182.3
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCC----CHHH
Q 000830 1018 IELRGVHFSYPSRP--EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRL----NLKS 1091 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~l~~ 1091 (1265)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 13689999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcccEEEecCC--CCCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHHhCCCCcc-ccccCCCCCCChhHHHHHH
Q 000830 1092 LRKHIALVQQEP--ALFATSIYENILYGKD--GASEGEVIEAAKLANAHSFISALPEGYS-TKVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1092 lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~LSgGQkQrla 1166 (1265)
+|++|+|+||+| .+|+.|++||+.++.. ..+.++..+.+ .++++.+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALA-----REKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 889999999998 6888999999986421 22333322211 1222222 333 1234455679999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR-KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998754 7899999999999865 99999999999999999999876
No 323
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=385.15 Aligned_cols=229 Identities=25% Similarity=0.400 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC----CCCcEEEECCcccCCCCHHH
Q 000830 1017 TIELRGVHFSYPSRPE-VVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD----PTAGKVMVDGIDIKRLNLKS 1091 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~----p~~G~I~idG~di~~~~l~~ 1091 (1265)
.++++||+++|+.... ..+|+||||+|++||++||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999975322 358999999999999999999999999999999999998 48999999999999888766
Q ss_pred Hh----cccEEEecCCC--CCc-ccHHHHh----ccCCCC---CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCC
Q 000830 1092 LR----KHIALVQQEPA--LFA-TSIYENI----LYGKDG---ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQL 1157 (1265)
Q Consensus 1092 lR----~~i~~VpQdp~--LF~-gTIreNl----~~g~~~---~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~L 1157 (1265)
+| +.|+||||+|. ++. -|+.+|+ ...... ...+++.++++.+++.+... .......+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPAS--------RLDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHH--------HHhCCchhC
Confidence 54 36999999995 442 2555544 321111 11244566666666643211 123455689
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEE
Q 000830 1158 SGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIE 1234 (1265)
Q Consensus 1158 SgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive 1234 (1265)
|||||||++|||||+.+|++||+||||++||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||.+|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999864 7899999999999964 99999999999999
Q ss_pred ecChhhhhhcCCcHHHHHH
Q 000830 1235 QGTHSSLVENEDGAYFKLI 1253 (1265)
Q Consensus 1235 ~Gt~~eLl~~~~g~f~~l~ 1253 (1265)
.|+++++++++...|.+.+
T Consensus 235 ~g~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 235 TGKAHDIFRAPRHPYTQAL 253 (326)
T ss_pred ECCHHHHhhCCCChHHHHH
Confidence 9999999986666676544
No 324
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.9e-41 Score=366.97 Aligned_cols=203 Identities=35% Similarity=0.601 Sum_probs=173.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 578999999974 3589999999999999999999999999999999999999999999999999765543 57899
Q ss_pred EEecCCCCCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFA-TSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~-gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||++.+|. .|++||+.++.. ..+. +++.++++..++.++... ...+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDR-----------KPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhC-----------ChhhCCHHHHHHHHHHHH
Confidence 9999999985 699999986421 1222 234455555555544333 345799999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999999998753 7899999999999876 9999999999999876
No 325
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.2e-40 Score=370.68 Aligned_cols=218 Identities=28% Similarity=0.462 Sum_probs=191.1
Q ss_pred CCcccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH
Q 000830 377 KLSGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL 456 (1265)
Q Consensus 377 ~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~ 456 (1265)
...+.|+++|+++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 35 ~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g----------- 98 (282)
T cd03291 35 SDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG----------- 98 (282)
T ss_pred CCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-----------
Confidence 345679999999952 3589999999999999999999999999999999999999999999998
Q ss_pred hhheeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 457 RQQIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 457 r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
.|+|++|++.+|+.|++||+.++... ...++.++++..++.+.+..+|.++++.+++.+.+||||||||++|||||+
T Consensus 99 --~i~yv~q~~~l~~~tv~enl~~~~~~-~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~ 175 (282)
T cd03291 99 --RISFSSQFSWIMPGTIKENIIFGVSY-DEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVY 175 (282)
T ss_pred --EEEEEeCcccccccCHHHHhhccccc-CHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHh
Confidence 39999999999999999999986432 233445556666777888889999999999999999999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHH-HHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccCCchHHH
Q 000830 537 KNPSILLLDEATSALDAESENSVQEAL-DRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISNPNSAYA 614 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l-~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 614 (1265)
.+|++|||||||++||+.+...+.+.+ ..+.+++|+|++||+++.+..||+|++|++|++++.|+++++... ...|.
T Consensus 176 ~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~ 253 (282)
T cd03291 176 KDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFS 253 (282)
T ss_pred cCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHH
Confidence 999999999999999999999888754 555568999999999999988999999999999999999998764 33443
No 326
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.4e-41 Score=371.88 Aligned_cols=212 Identities=29% Similarity=0.483 Sum_probs=179.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH-Hhccc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS-LRKHI 1096 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~i 1096 (1265)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 578999999973 35899999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEecCCCCCcc-cHHHHhccCCCCC--CHHH-HHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000830 1097 ALVQQEPALFAT-SIYENILYGKDGA--SEGE-VIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVL 1172 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~~~~--sd~e-i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALl 1172 (1265)
+|+||++.+|.. |+++|+.++.... ..++ ..++++..+ +++........+||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999986 9999998653221 1122 122222221 1222334455679999999999999999
Q ss_pred cCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1173 KNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1173 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999999998764 7899999999999986 9999999999999999999984
No 327
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=377.19 Aligned_cols=217 Identities=29% Similarity=0.502 Sum_probs=184.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++||+|+|++....++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334589999999999999999999999999999999999999999999999999877777888899
Q ss_pred eEEccCCc--cccccHHHHhccCCC--CCCHHHH----HHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 461 GLVNQEPA--LFATTIRENILYGKD--DATMEEI----TRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 461 ~~v~Q~~~--lf~~ti~~ni~~~~~--~~~~~~~----~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
+||+|+|. ++..|+.|||.++.. ..+.+++ .++++..++ ..........||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNM-----------LDFKTREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCC-----------HhHhhCCcccCCHHHHHHHHHH
Confidence 99999983 667799999987632 2233332 222333222 2223445678999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|||+++|++|||||||++||+.+...+.+.|.++.+ |+|+|+|||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999988753 8999999999999988999999999999999999998764
No 328
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5.8e-41 Score=367.86 Aligned_cols=205 Identities=29% Similarity=0.487 Sum_probs=172.6
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH---Hh
Q 000830 1018 IELRGVHFSYPSRP-EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS---LR 1093 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---lR 1093 (1265)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 146899999999999999999999999999999999999999999999999998877554 34
Q ss_pred -cccEEEecCCCCCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1094 -KHIALVQQEPALFA-TSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1094 -~~i~~VpQdp~LF~-gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
++++|+||+|.+|. .|++||+.++.. ..+. +++.++++..+ ++.........||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVG-----------LEHRINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------ChhhhhCChhhCCHHHHHHH
Confidence 68999999999985 599999976321 1121 23334444444 43334444567999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEeCCEEE
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIESGKII 1233 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~~G~Iv 1233 (1265)
+|||||+++|++|||||||++||+++...+.+.|++..+ ++|+|+|||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 999999999999999999999999999999999998753 78999999999999889999999999985
No 329
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=372.53 Aligned_cols=224 Identities=32% Similarity=0.524 Sum_probs=191.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 1089 (1265)
.++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+.+ |++|+|.+||.++.. .+.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 358999999999999999999999999999999999875 389999999999875 346
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD--GA-S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|++++|+||+|.+|.+|++||+.++.. .. + ++++.++++.+++.+++..+ ....+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK-------LDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH-------HhCCcccCCHHHH
Confidence 678999999999999999999999986521 11 1 23455667777776554422 2345568999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999887 899999999999999999999
Q ss_pred hhcCCcHHH
Q 000830 1242 VENEDGAYF 1250 (1265)
Q Consensus 1242 l~~~~g~f~ 1250 (1265)
...+.+.|.
T Consensus 233 ~~~~~~~~~ 241 (250)
T PRK14266 233 FINPKDKRT 241 (250)
T ss_pred HhCCCChHH
Confidence 765555543
No 330
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.2e-41 Score=369.11 Aligned_cols=208 Identities=36% Similarity=0.498 Sum_probs=172.4
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChH----HH
Q 000830 382 IEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLK----WL 456 (1265)
Q Consensus 382 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~----~~ 456 (1265)
|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999997421 14699999999999999999999999999999999999999999999999998876643 24
Q ss_pred hhheeEEccCCccccc-cHHHHhccCCCCC--CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 457 RQQIGLVNQEPALFAT-TIRENILYGKDDA--TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 457 r~~i~~v~Q~~~lf~~-ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
+++++|++|++.+|.. |++||+.++.... ...+.. ..+.+.+..+ |++......+.+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERR-----ERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHH-----HHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 5689999999999986 9999998864211 111111 1122233333 3444456667899999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhccCEEEEEeCCEE
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRNADVIAVVQGRKI 596 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i 596 (1265)
||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998754 8999999999999888999999999974
No 331
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-41 Score=374.76 Aligned_cols=220 Identities=31% Similarity=0.513 Sum_probs=183.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC--C---CcceEEECCeeCCC--CCh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE--P---LSGEILLDGNNIKG--LDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~--~~~ 453 (1265)
.|+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 359999999999999999999999999999999999997 3 59999999999863 345
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCCC---CHHHH----HHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDDA---TMEEI----TRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~---~~~~~----~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
..+|+.++|++|++.+|+.|++||+.++.... ..++. .++++..+ +.+.+.+.....+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVA-------LWDEVKDRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcC-------CchhhhhhhhCCcccCCHHHH
Confidence 57788999999999999999999998763211 12222 12222222 211122345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++|||||+++|++|||||||++||+.+...+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999998
Q ss_pred ccCCc
Q 000830 606 ISNPN 610 (1265)
Q Consensus 606 ~~~~~ 610 (1265)
..++.
T Consensus 242 ~~~~~ 246 (259)
T PRK14274 242 FSNPD 246 (259)
T ss_pred hhCCC
Confidence 76533
No 332
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=379.57 Aligned_cols=222 Identities=30% Similarity=0.488 Sum_probs=182.3
Q ss_pred cccEEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCC----C-
Q 000830 1015 EGTIELRGVHFSYPSRP--EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKR----L- 1087 (1265)
Q Consensus 1015 ~g~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----~- 1087 (1265)
.+.|+++|++++|++.+ ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999997432 1358999999999999999999999999999999999999999999999999852 2
Q ss_pred CHHHHhcccEEEecCC--CCCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHHhCCCCcc-ccccCCCCCCChhHH
Q 000830 1088 NLKSLRKHIALVQQEP--ALFATSIYENILYGKD--GASEGEVIEAAKLANAHSFISALPEGYS-TKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1088 ~l~~lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~LSgGQk 1162 (1265)
+...+|++++|+||+| .+|..|++||+.++.. ....++..+.+ .+.++.+ |+. ........+||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~~LS~Gq~ 156 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKV-----PELLKLV--QLPEDYVKRSPFELSGGQK 156 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhHhcCChhhCCHHHH
Confidence 4567888999999998 4778899999987532 22333322211 1122221 221 123345568999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHS 1239 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1239 (1265)
||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPF 236 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998753 7899999999999865 9999999999999999999
Q ss_pred hhhh
Q 000830 1240 SLVE 1243 (1265)
Q Consensus 1240 eLl~ 1243 (1265)
++.+
T Consensus 237 ~~~~ 240 (289)
T PRK13645 237 EIFS 240 (289)
T ss_pred HHhc
Confidence 8865
No 333
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=372.40 Aligned_cols=219 Identities=32% Similarity=0.496 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCCC--CH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKRL--NL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~l 1089 (1265)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 3589999999999999999999999999999999999875 799999999998653 34
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD--GA-S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|++++|+||++.+|..|++||+.++.. .. + .+++.++++.+++.+.+. .........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVK-------DDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHH
Confidence 567899999999999999999999986421 11 1 133455666666543322 223345668999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999876 999999999999999999999
Q ss_pred hhcC
Q 000830 1242 VENE 1245 (1265)
Q Consensus 1242 l~~~ 1245 (1265)
....
T Consensus 234 ~~~~ 237 (251)
T PRK14270 234 FLEP 237 (251)
T ss_pred hcCC
Confidence 7643
No 334
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=378.80 Aligned_cols=216 Identities=33% Similarity=0.558 Sum_probs=181.6
Q ss_pred cEEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCC----CHH
Q 000830 1017 TIELRGVHFSYPSRP--EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRL----NLK 1090 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~l~ 1090 (1265)
.|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997321 14689999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhcccEEEecCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhchHHHHHhCCCCccc-cccCCCCCCChhH
Q 000830 1091 SLRKHIALVQQEP--ALFATSIYENILYGKD--GASEGE----VIEAAKLANAHSFISALPEGYST-KVGERGVQLSGGQ 1161 (1265)
Q Consensus 1091 ~lR~~i~~VpQdp--~LF~gTIreNl~~g~~--~~sd~e----i~~al~~a~l~~~i~~lp~Gldt-~vge~G~~LSgGQ 1161 (1265)
..|+.++|+||+| .+|..|++||+.++.. ..+.++ +.++++.. |+++ .......+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKV-----------GLSEDLISKSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCChhHhhCCcccCCHHH
Confidence 6788999999998 5888899999976421 223222 23333333 3432 2344456899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChh
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHS 1239 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1239 (1265)
|||++|||||+++|++|||||||++||+.+...+.+.|++.. ++.|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999875 47899999999999865 9999999999999999999
Q ss_pred hhhh
Q 000830 1240 SLVE 1243 (1265)
Q Consensus 1240 eLl~ 1243 (1265)
++.+
T Consensus 231 ~~~~ 234 (287)
T PRK13641 231 EIFS 234 (287)
T ss_pred HHhc
Confidence 9875
No 335
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-41 Score=369.87 Aligned_cols=211 Identities=38% Similarity=0.593 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++ .++++|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 578999999973 358999999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEecCCCCCcc-cHHHHhccCCC--CC----CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFAT-SIYENILYGKD--GA----SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~~--~~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||++.+|.+ |+++|+.++.. .. .++++.++++..++.++....| .+||+|||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 99999976421 11 1345566666666665554433 5799999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999998764 7899999999999876 999999999999999999998764
No 336
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-41 Score=371.05 Aligned_cols=216 Identities=30% Similarity=0.516 Sum_probs=179.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccC------CCCHHH
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIK------RLNLKS 1091 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~------~~~l~~ 1091 (1265)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 35899999999999999999999999999999999999999999999999873 123456
Q ss_pred HhcccEEEecCCCCCcc-cHHHHhccCC---CCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1092 LRKHIALVQQEPALFAT-SIYENILYGK---DGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1092 lR~~i~~VpQdp~LF~g-TIreNl~~g~---~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
+|++++|+||+|.+|.+ |++||+.++. .....++..+ .+.++++.+ |++........+||||||||++|
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~l 152 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALA-----RAEKLLERL--RLKPYADRFPLHLSGGQQQRVAI 152 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 78899999999999975 9999996421 1122222111 122333333 34444444456899999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR-KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||++++|++|||||||++||+++...+.+.|++..+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 9999999999999999999999999999999998754 7899999999999976 99999999999999999998865
No 337
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=371.23 Aligned_cols=204 Identities=32% Similarity=0.466 Sum_probs=178.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 5999999999963 35899999999999999999999999999999999999999999999998763 567899
Q ss_pred EEEecCCCCCc-ccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000830 1097 ALVQQEPALFA-TSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNP 1175 (1265)
Q Consensus 1097 ~~VpQdp~LF~-gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p 1175 (1265)
+|+||++.+|. .|++||+.++.....++++.++++..++.++. .....+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRA-----------NEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 69999998754322345666677766665443 3344689999999999999999999
Q ss_pred CEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChh
Q 000830 1176 EILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHS 1239 (1265)
Q Consensus 1176 ~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~ 1239 (1265)
++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999999874 37899999999999865 9999999999999988765
No 338
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-41 Score=364.03 Aligned_cols=203 Identities=26% Similarity=0.456 Sum_probs=172.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++|+|++ .++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++...+ ..++++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 578999999964 35999999999999 99999999999999999999999999999999999987766 67788999
Q ss_pred EEccCCccccc-cHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 462 LVNQEPALFAT-TIRENILYGKD--DATM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
|++|++.+|.. |++||+.+... .... +++.++++..++.+ .......+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGD-----------RAKKKIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHH-----------HHhCchhhCCHHHHHHHHHHHH
Confidence 99999999986 99999986421 1111 22233333333221 2233456899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEee
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 600 (1265)
|+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999988777999999999999865 9999999999998765
No 339
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.5e-41 Score=363.94 Aligned_cols=199 Identities=33% Similarity=0.543 Sum_probs=167.6
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeE
Q 000830 383 EFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGL 462 (1265)
Q Consensus 383 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 462 (1265)
+++|++++|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999641 458999999999999999999999999999999999999999999999998753 456778999
Q ss_pred EccCC--ccccccHHHHhccCCCCCC--HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 463 VNQEP--ALFATTIRENILYGKDDAT--MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 463 v~Q~~--~lf~~ti~~ni~~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
++|++ .+++.|++||+.++.+... .+++.++++..++ +........+||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDL-----------YALKERHPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCC-----------chhcCCCchhCCHHHHHHHHHHHHHHhC
Confidence 99998 4677899999988643221 2233444443333 2223445568999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEE
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIV 597 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~ 597 (1265)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999998874 58999999999999875 9999999999975
No 340
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-41 Score=390.67 Aligned_cols=209 Identities=34% Similarity=0.540 Sum_probs=173.4
Q ss_pred ccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH----hhheeEEccCCccccc-
Q 000830 398 AIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL----RQQIGLVNQEPALFAT- 472 (1265)
Q Consensus 398 ~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~lf~~- 472 (1265)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+ |++++||+|++.+|+.
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999988876554 3579999999999975
Q ss_pred cHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCC
Q 000830 473 TIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSA 550 (1265)
Q Consensus 473 ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~ 550 (1265)
|++||+.++... ...++..+ .+.+.+..+ |++........+||||||||++|||||+.+|++||||||||+
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~--gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~ 194 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERRE-----KALDALRQV--GLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSA 194 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 999999986321 11111111 111222222 333344556678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCchHH
Q 000830 551 LDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNSAY 613 (1265)
Q Consensus 551 lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 613 (1265)
||+.+...+++.|.++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 195 LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 195 LDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 99999999999998874 48999999999999865 99999999999999999999987654444
No 341
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=9.2e-41 Score=376.16 Aligned_cols=227 Identities=30% Similarity=0.478 Sum_probs=185.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChH---HHh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLK---WLR 457 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r 457 (1265)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .++
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 5899999999963 4589999999999999999999999999999999999999999999999998766543 357
Q ss_pred hheeEEccCCccccc-cHHHHhccCCCC---CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 458 QQIGLVNQEPALFAT-TIRENILYGKDD---ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~~-ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
++++|++|++.+|++ |+.||+.++... ....+... + +.+.+..+ |+.........+||||||||++|||
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~--~---~~~~l~~~--gl~~~~~~~~~~LSgGq~qrv~lar 156 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHS--T---VMMKLEAV--GLRGAAKLMPSELSGGMARRAALAR 156 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHH--H---HHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999986 999999875211 11111111 1 11122222 2333344556789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCc
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPN 610 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 610 (1265)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.+.
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 236 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANPD 236 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCCc
Confidence 99999999999999999999999999999998753 7999999999999876 99999999999999999999886544
Q ss_pred hHHHHHH
Q 000830 611 SAYAALV 617 (1265)
Q Consensus 611 ~~~~~~~ 617 (1265)
..+..+.
T Consensus 237 ~~~~~~~ 243 (269)
T PRK11831 237 PRVRQFL 243 (269)
T ss_pred HHHHHHH
Confidence 4444443
No 342
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=5.3e-41 Score=366.26 Aligned_cols=201 Identities=35% Similarity=0.577 Sum_probs=174.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHH---HHhc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLK---SLRK 1094 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR~ 1094 (1265)
|+++|++++|++ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 24689999999999999999999999999999999999999999999999999877643 4688
Q ss_pred ccEEEecCCCCCc-ccHHHHhccCCC------CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1095 HIALVQQEPALFA-TSIYENILYGKD------GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1095 ~i~~VpQdp~LF~-gTIreNl~~g~~------~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
+++|+||+|.+|. .|++||+.++.. ...+++++++++..++.+.....| .+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999986 699999976421 112345667777777665544332 4799999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCE
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGK 1231 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~ 1231 (1265)
||||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999875 47899999999999986 99999999985
No 343
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=374.62 Aligned_cols=219 Identities=31% Similarity=0.491 Sum_probs=182.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCC--CCh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKG--LDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 453 (1265)
.|+++|++|+|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5899999999963 359999999999999999999999999999999999865 799999999999864 334
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCCC---CH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDDA---TM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
..++++++|++|++.+|++|++||+.++.... .. +.+.++++..+ +..+........+.+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAA-------LWDEVKDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcC-------CCcchHHHHhcCcccCCHHHH
Confidence 56788999999999999999999998753211 11 11222222221 111122334567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777999999999998865 999999999999999999988
Q ss_pred ccCC
Q 000830 606 ISNP 609 (1265)
Q Consensus 606 ~~~~ 609 (1265)
..++
T Consensus 251 ~~~~ 254 (268)
T PRK14248 251 FTSP 254 (268)
T ss_pred HhCC
Confidence 7653
No 344
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.9e-41 Score=370.11 Aligned_cols=216 Identities=26% Similarity=0.493 Sum_probs=182.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 689999999963 45999999999999999999999999999999999999999999999999987766544 45899
Q ss_pred EEccCCccc-cccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 462 LVNQEPALF-ATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 462 ~v~Q~~~lf-~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
|++|++.++ ..|++||+.++... ....+..+ .+.+.+..+ |++......+.+||||||||++|||||+++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999885 56999999875321 12221111 122334333 455556677789999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999875 48999999999999988999999999999999998887653
No 345
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.9e-40 Score=370.77 Aligned_cols=219 Identities=33% Similarity=0.511 Sum_probs=182.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCC--------
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLD-------- 452 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-------- 452 (1265)
.++++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++...+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 3889999999963 35999999999999999999999999999999999999999999999999986532
Q ss_pred hHHHhhheeEEccCCcccc-ccHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHH
Q 000830 453 LKWLRQQIGLVNQEPALFA-TTIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQR 528 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 528 (1265)
...+|++++||+|++.+|+ .|++||+.++.. ....++..+. +.+.++.+ |++......+.+||||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~Gq~qr 152 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATAR-----ARELLAKV--GLAGKETSYPRRLSGGQQQR 152 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCcchhhCChhhCChHHHHH
Confidence 3457789999999999886 599999986421 1122221111 12233333 34444556778999999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC-CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhc
Q 000830 529 IAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV-GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELI 606 (1265)
Q Consensus 529 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 606 (1265)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 153 VAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999988754 8999999999999876 9999999999999999999987
Q ss_pred cCC
Q 000830 607 SNP 609 (1265)
Q Consensus 607 ~~~ 609 (1265)
+.+
T Consensus 233 ~~~ 235 (250)
T PRK11264 233 ADP 235 (250)
T ss_pred cCC
Confidence 653
No 346
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=375.97 Aligned_cols=221 Identities=30% Similarity=0.537 Sum_probs=187.5
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCC--CC
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKR--LN 1088 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~ 1088 (1265)
..|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 46999999999963 358999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhcccEEEecCCCCCcccHHHHhccCCC-----CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1089 LKSLRKHIALVQQEPALFATSIYENILYGKD-----GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~-----~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
...+|++++||||++.+|..|++||+.++.. ...++++.++++..++...+. ........+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVK-------DQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhH-------HHHhCCcccCCHHHHH
Confidence 5678899999999999998999999986421 112345666666666543322 1234455689999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEE-EEeCCEEEEecChhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQIS-VIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~-vl~~G~Ive~Gt~~eL 1241 (1265)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 99975 5799999999999998
Q ss_pred hhcCC
Q 000830 1242 VENED 1246 (1265)
Q Consensus 1242 l~~~~ 1246 (1265)
.++..
T Consensus 268 ~~~~~ 272 (285)
T PRK14254 268 FENPE 272 (285)
T ss_pred HhCcC
Confidence 76433
No 347
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=372.39 Aligned_cols=220 Identities=34% Similarity=0.573 Sum_probs=183.6
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCC--CC
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKG--LD 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 452 (1265)
+.|+++||+++|++ .++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 35899999999973 3589999999999999999999999999999999999863 69999999999864 34
Q ss_pred hHHHhhheeEEccCCccccccHHHHhccCCCCC---CH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 453 LKWLRQQIGLVNQEPALFATTIRENILYGKDDA---TM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
...+|+.++||+|++.+|+.|++||+.++.... .. +++.++++..++ .+++.......+.+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAAL-------WDEVKDRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC-------chhhHHHHhcCCCCCCHHH
Confidence 556788999999999999999999998763211 11 122222222222 1222234556778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcch
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEE 604 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 604 (1265)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999998865 99999999999999999998
Q ss_pred hccCC
Q 000830 605 LISNP 609 (1265)
Q Consensus 605 l~~~~ 609 (1265)
+...+
T Consensus 232 ~~~~~ 236 (250)
T PRK14240 232 LFTNP 236 (250)
T ss_pred HHhCC
Confidence 87543
No 348
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=7e-41 Score=387.70 Aligned_cols=211 Identities=29% Similarity=0.466 Sum_probs=172.7
Q ss_pred CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCe----eCCCCChHHHh----hheeEEccCCc
Q 000830 397 VAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGN----NIKGLDLKWLR----QQIGLVNQEPA 468 (1265)
Q Consensus 397 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~----~~~~~~~~~~r----~~i~~v~Q~~~ 468 (1265)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|. ++...+...++ ++|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 45899999999999999999999999999999999999999999999996 56666655443 57999999999
Q ss_pred ccc-ccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEe
Q 000830 469 LFA-TTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLD 545 (1265)
Q Consensus 469 lf~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlD 545 (1265)
+|+ .|++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++|||||+.+|+|||||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~-----~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlD 189 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRK-----RVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMD 189 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 998 5999999987421 12221111 111222222 2333344556789999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCchHHH
Q 000830 546 EATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPNSAYA 614 (1265)
Q Consensus 546 E~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 614 (1265)
||||+||+.+...+++.|.++.+ ++|+|+|||+++++.. ||+|++|++|++++.|++++++.++...|.
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~ 261 (382)
T TIGR03415 190 EPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYV 261 (382)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHH
Confidence 99999999999999999988753 8999999999999754 999999999999999999999876544444
No 349
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=374.02 Aligned_cols=227 Identities=31% Similarity=0.479 Sum_probs=192.0
Q ss_pred CCcccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccC--
Q 000830 1013 NVEGTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIK-- 1085 (1265)
Q Consensus 1013 ~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~-- 1085 (1265)
+..+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 12 ~~~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 12 PTQQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred CCCceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 34578999999999973 3589999999999999999999999999999999999875 7999999998874
Q ss_pred --CCCHHHHhcccEEEecCCCCCcccHHHHhccCCC--C-----CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCC
Q 000830 1086 --RLNLKSLRKHIALVQQEPALFATSIYENILYGKD--G-----ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQ 1156 (1265)
Q Consensus 1086 --~~~l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~ 1156 (1265)
..+...+|++++|+||++.+|.+|++||+.++.. . ..++++.++++.+++.+. +.+........
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~ 161 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDE-------VKDRLGDLAFN 161 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchh-------hhHHHhCCccc
Confidence 3345678899999999999999999999986521 1 113456666666665432 22334555678
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 000830 1157 LSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQ 1235 (1265)
Q Consensus 1157 LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~ 1235 (1265)
||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 162 LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~ 241 (265)
T PRK14252 162 LSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEF 241 (265)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999998777899999999999975 999999999999999
Q ss_pred cChhhhhhcCCcHH
Q 000830 1236 GTHSSLVENEDGAY 1249 (1265)
Q Consensus 1236 Gt~~eLl~~~~g~f 1249 (1265)
|+++++..+....|
T Consensus 242 g~~~~~~~~~~~~~ 255 (265)
T PRK14252 242 GATDTIFIKPKNKQ 255 (265)
T ss_pred CCHHHHHhCCCCHH
Confidence 99999975443333
No 350
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.1e-40 Score=372.94 Aligned_cols=219 Identities=31% Similarity=0.519 Sum_probs=183.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCC---------
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLD--------- 452 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--------- 452 (1265)
|+++||+|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 578999999963 35999999999999999999999999999999999999999999999999986543
Q ss_pred ----hHHHhhheeEEccCCcccc-ccHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChH
Q 000830 453 ----LKWLRQQIGLVNQEPALFA-TTIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGG 524 (1265)
Q Consensus 453 ----~~~~r~~i~~v~Q~~~lf~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 524 (1265)
...+|+.++|++|++.+|. .|+.||+.++.. ....++..+ .+.+.+..+ |++......+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEK-----RAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2466888999999999886 699999987521 111111111 122334333 3444566677899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeC
Q 000830 525 QKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 525 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 601 (1265)
||||++|||||+++|++|||||||++||+.++..+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988753 8999999999999865 99999999999999999
Q ss_pred cchhccCCc
Q 000830 602 HEELISNPN 610 (1265)
Q Consensus 602 ~~~l~~~~~ 610 (1265)
++++.+.+.
T Consensus 231 ~~~~~~~~~ 239 (252)
T TIGR03005 231 PDEIFRQPK 239 (252)
T ss_pred HHHHhcCCC
Confidence 999876543
No 351
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=8.6e-41 Score=366.48 Aligned_cols=209 Identities=29% Similarity=0.501 Sum_probs=172.9
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH---Hh
Q 000830 382 IEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW---LR 457 (1265)
Q Consensus 382 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 457 (1265)
++++||+++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996422 246999999999999999999999999999999999999999999999999998776543 34
Q ss_pred -hheeEEccCCccccc-cHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 458 -QQIGLVNQEPALFAT-TIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 458 -~~i~~v~Q~~~lf~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
+.++||+|++.+|+. |++||+.++.. .....+..+ .+.+.+..+ |++......+.+||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKE-----RAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 679999999999964 99999987421 111111111 111223332 3444456667889999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhccCEEEEEeCCEEE
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRNADVIAVVQGRKIV 597 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~ 597 (1265)
||+.+|++|||||||++||++++..+.+.|.++. .++|+|++||+++.+..+|+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999998875 379999999999999889999999999985
No 352
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=370.55 Aligned_cols=217 Identities=25% Similarity=0.461 Sum_probs=184.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH-Hhcc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS-LRKH 1095 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~ 1095 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .|+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3889999999963 46899999999999999999999999999999999999999999999999998877644 5789
Q ss_pred cEEEecCCCCCcc-cHHHHhccCCC---CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000830 1096 IALVQQEPALFAT-SIYENILYGKD---GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAV 1171 (1265)
Q Consensus 1096 i~~VpQdp~LF~g-TIreNl~~g~~---~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARAL 1171 (1265)
++|+||++.+|.+ |++||+.++.. ..+.++.. ..+.++++.+ |++.........||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHH-----HHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999999875 99999986421 11222211 1233445544 455555566678999999999999999
Q ss_pred ccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1172 LKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1172 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
+++|++|||||||++||+.+...+.+.+++.. +++|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999998875 47899999999988765 99999999999999999999875
No 353
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6e-41 Score=369.96 Aligned_cols=212 Identities=30% Similarity=0.503 Sum_probs=178.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH-Hhhhe
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW-LRQQI 460 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 460 (1265)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999973 35999999999999999999999999999999999999999999999999998777654 46789
Q ss_pred eEEccCCccccc-cHHHHhccCCCCC--CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDDA--TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
+|++|++.+|+. |++||+.++.... ..++.. . +.+..+ ++++........+||||||||++|||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~---~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIP-----D---EIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHH-----H---HHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 9999998764221 111110 1 111111 112333456677899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
+|+++||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||+|+++++|++++.|+++++
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999999999988753 7999999999999986 999999999999999999887
No 354
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.8e-40 Score=367.13 Aligned_cols=211 Identities=35% Similarity=0.534 Sum_probs=181.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 578999999973 358999999999999999999999999999999999999999999999999986553 478899
Q ss_pred EEecCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFAT-SIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||+|.+|.+ |++||+.++.. ..+ ++++.++++..++.++.. ....+||+||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGD-----------RYPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHHHHHHHHHHH
Confidence 99999999975 99999986532 111 234455555555544433 2335799999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
++++|+++||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998754 7899999999999876 999999999999999999999763
No 355
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1e-40 Score=352.33 Aligned_cols=178 Identities=37% Similarity=0.643 Sum_probs=165.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++|+|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+|+.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23599999999999999999999999999999999999999999999999988665 567788999
Q ss_pred EEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000830 462 LVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSI 541 (1265)
Q Consensus 462 ~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 541 (1265)
|++|++.+|+.|++||+ +.+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 457999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhccCEEEEEeCCEEEEee
Q 000830 542 LLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 542 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 600 (1265)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999998764
No 356
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-40 Score=365.06 Aligned_cols=209 Identities=25% Similarity=0.425 Sum_probs=174.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 3599999999999999999999999999999999999999999999999988653 356678899
Q ss_pred EEccCCccccc-cHHHHhccCCC--CCCHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 462 LVNQEPALFAT-TIRENILYGKD--DATME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~--~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
|++|++.+++. |++||+.++.. ....+ ++.++++..+ ++........+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVG-----------LLEAADRLVKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------CHHHhhCChhhCCHHHHHHHHHHHH
Confidence 99999998876 99999987421 11111 2222222222 2222334456899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVM-V-GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
++.+|++|||||||++||+++...+.+.|.++. + ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999998875 3 7899999999999876 999999999999999987664
No 357
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=371.22 Aligned_cols=213 Identities=29% Similarity=0.474 Sum_probs=185.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++++
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 3789999999973 3589999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEecCCCC-CcccHHHHhccCCCC--C----CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPAL-FATSIYENILYGKDG--A----SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~L-F~gTIreNl~~g~~~--~----sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
+|+||++.+ +..|++||+.++... . .++.+.++++..++.++. ......||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgGe~qrv~la~ 147 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLA-----------GRDYPQLSGGEQQRVQLAR 147 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHh-----------cCCcccCCHHHHHHHHHHH
Confidence 999999987 678999999875321 1 123455666666654433 2334579999999999999
Q ss_pred Hhc------cCCCEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000830 1170 AVL------KNPEILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSS 1240 (1265)
Q Consensus 1170 ALl------r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1240 (1265)
||+ .+|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAE 227 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHH
Confidence 999 5999999999999999999999999999875 47899999999999875 99999999999999999999
Q ss_pred hhh
Q 000830 1241 LVE 1243 (1265)
Q Consensus 1241 Ll~ 1243 (1265)
+.+
T Consensus 228 ~~~ 230 (258)
T PRK13548 228 VLT 230 (258)
T ss_pred HhC
Confidence 875
No 358
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=382.93 Aligned_cols=229 Identities=28% Similarity=0.458 Sum_probs=185.1
Q ss_pred cEEEEeEEEECCCCC-------CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh
Q 000830 381 HIEFKDVSFCYPSRP-------DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~-------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~ 453 (1265)
-|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999997321 2468999999999999999999999999999999999999999999999999988765
Q ss_pred H---HHhhheeEEccCC--ccccc-cHHHHhccCC---CCCCHHHHHHHHHHhcHHHHHhcCccccc-ccccCCCCCCCh
Q 000830 454 K---WLRQQIGLVNQEP--ALFAT-TIRENILYGK---DDATMEEITRAAKLSEAMSFISNLPERFE-TQVGERGIQLSG 523 (1265)
Q Consensus 454 ~---~~r~~i~~v~Q~~--~lf~~-ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSg 523 (1265)
. .+|++|+||+|+| .|++. ||.+|+..+. ......+..+ .+.+.+..+ |++ ......+.+|||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~p~~LSg 157 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERRE-----KALAMMAKV--GLRPEHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHH-----HHHHHHHHC--CCChHHhcCCCccCCH
Confidence 3 4677899999998 36654 9999986421 1112211111 111222222 111 123445678999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEee
Q 000830 524 GQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 524 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 600 (1265)
|||||++|||||+.+|++||+||||++||..++..|.+.|.++.+ |.|+|+|||+++.+.. ||+|++|++|+|+|.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999999988753 8999999999999976 9999999999999999
Q ss_pred CcchhccCCchHHHHH
Q 000830 601 SHEELISNPNSAYAAL 616 (1265)
Q Consensus 601 ~~~~l~~~~~~~~~~~ 616 (1265)
+.+++++++...|.+.
T Consensus 238 ~~~~~~~~p~hpyt~~ 253 (327)
T PRK11308 238 TKEQIFNNPRHPYTQA 253 (327)
T ss_pred CHHHHhcCCCCHHHHH
Confidence 9999988766666543
No 359
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-41 Score=383.87 Aligned_cols=227 Identities=23% Similarity=0.394 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCCCC-CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC----CCcceEEECCeeCCCCChHHH
Q 000830 382 IEFKDVSFCYPSRPD-VAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE----PLSGEILLDGNNIKGLDLKWL 456 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~~~g~~~~~~~~~~~ 456 (1265)
++++|++++|+.... ..+|+||||+|++||++||||+||||||||+++|+|+++ |++|+|.++|+++..++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 799999999974322 459999999999999999999999999999999999998 489999999999988887665
Q ss_pred hh----heeEEccCCc--cccc-cHHHHhccCC---CCCCHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCC
Q 000830 457 RQ----QIGLVNQEPA--LFAT-TIRENILYGK---DDATME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLS 522 (1265)
Q Consensus 457 r~----~i~~v~Q~~~--lf~~-ti~~ni~~~~---~~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 522 (1265)
++ .|+||+|+|. +++. |+.+++.... .....+ ++.++++..+ |++ ........+.+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~g-------L~~-~~~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVG-------IPD-PASRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCC-------CCC-hHHHHhCCchhCC
Confidence 43 6999999995 4443 6666554211 011111 2222222222 221 1233567788999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEe
Q 000830 523 GGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKT 599 (1265)
Q Consensus 523 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~ 599 (1265)
||||||++|||||+.+|++||+|||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998853 8999999999999865 999999999999999
Q ss_pred eCcchhccCCchHHHHH
Q 000830 600 GSHEELISNPNSAYAAL 616 (1265)
Q Consensus 600 g~~~~l~~~~~~~~~~~ 616 (1265)
|+.+++.+++...|.+.
T Consensus 236 g~~~~~~~~p~hpyt~~ 252 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQA 252 (326)
T ss_pred CCHHHHhhCCCChHHHH
Confidence 99999998766666543
No 360
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.8e-40 Score=362.75 Aligned_cols=210 Identities=32% Similarity=0.494 Sum_probs=186.9
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCH----HHHhc
Q 000830 1019 ELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNL----KSLRK 1094 (1265)
Q Consensus 1019 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l----~~lR~ 1094 (1265)
.+.|+.|+|+.+ .++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999744 468999999999999999999999999999999999999999999999998876542 34577
Q ss_pred ccEEEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000830 1095 HIALVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKN 1174 (1265)
Q Consensus 1095 ~i~~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~ 1174 (1265)
.++|+||+|.+|+.|++||+.++.+ ..+++..++++..++.+++..+|.|+++.++....+||||||||++||||++++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999988543 345667788888899899999999999999998999999999999999999999
Q ss_pred CCEEEEecCcCCCCHHHHHHHHH--HHHHHc-CCceEEEEecCchhhhccCEEEEEeCCE
Q 000830 1175 PEILLLDEATSALDVESERVVQQ--ALQRLM-RKRTTIIVAHRLSTIKNADQISVIESGK 1231 (1265)
Q Consensus 1175 p~ILlLDEaTSaLD~~te~~I~~--~l~~~~-~~~TvI~IaHRl~ti~~~DrI~vl~~G~ 1231 (1265)
|++|||||||++||+.+...+.+ .++... .++|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988887 454443 3689999999999998899999999984
No 361
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=374.09 Aligned_cols=220 Identities=27% Similarity=0.477 Sum_probs=184.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCC--CCh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKG--LDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 453 (1265)
.++++|++|+|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 358999999999999999999999999999999999997 699999999999853 345
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCC--CCCHHH-----HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKD--DATMEE-----ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~--~~~~~~-----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
..++++++|++|++.+|..|++||+.++.. ...+++ +.++++..+ +.+++.......+.+||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAA-------IWDELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcC-------CcchHHHHHhcCcccCCHHHH
Confidence 667889999999999998999999987532 111111 111111111 112333445677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999998
Q ss_pred ccCCc
Q 000830 606 ISNPN 610 (1265)
Q Consensus 606 ~~~~~ 610 (1265)
...+.
T Consensus 254 ~~~~~ 258 (271)
T PRK14238 254 FSNPS 258 (271)
T ss_pred HcCCC
Confidence 76543
No 362
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=371.36 Aligned_cols=225 Identities=30% Similarity=0.463 Sum_probs=192.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~l 1089 (1265)
.+.+++++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4889999999963 4689999999999999999999999999999999999987 79999999999864 344
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCCC-----CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGKD-----GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQR 1164 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~~-----~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQr 1164 (1265)
..+|++++|+||+|.+|..|++||+.++.. ....+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 567889999999999999999999987531 1123466777777776544432 2345667899999999
Q ss_pred HHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEe--------CCEEEEe
Q 000830 1165 VAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIE--------SGKIIEQ 1235 (1265)
Q Consensus 1165 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~--------~G~Ive~ 1235 (1265)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998778899999999999876 99999996 8999999
Q ss_pred cChhhhhhcCCcHHHH
Q 000830 1236 GTHSSLVENEDGAYFK 1251 (1265)
Q Consensus 1236 Gt~~eLl~~~~g~f~~ 1251 (1265)
|+++++++++...+.+
T Consensus 238 g~~~~~~~~~~~~~~~ 253 (261)
T PRK14263 238 GPTAQIFQNPREQLTS 253 (261)
T ss_pred CCHHHHHhCCCcHHHH
Confidence 9999998754433433
No 363
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=9.1e-41 Score=362.55 Aligned_cols=203 Identities=27% Similarity=0.449 Sum_probs=173.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ..++++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 478999999963 4599999999999999999999999999999999999999999999999988654 45678899
Q ss_pred EEccCCcccc-ccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 462 LVNQEPALFA-TTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 462 ~v~Q~~~lf~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
||+|++.+|. .|++||+.++.. ..+.+++.++++..++.+ .....+.+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKD-----------SAKKKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHH-----------HHhhhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998885 599999987532 123344444444443322 23445678999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEee
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 600 (1265)
|++|||||||++||+.+.+.+.+.|.++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998875 48999999999999875 9999999999998765
No 364
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=370.38 Aligned_cols=222 Identities=30% Similarity=0.513 Sum_probs=188.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccC-CCCHH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIK-RLNLK 1090 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~-~~~l~ 1090 (1265)
.++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 4589999999999999999999999999999999999986 5999999999985 45667
Q ss_pred HHhcccEEEecCCCCCcccHHHHhccCCC--CCC-H----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1091 SLRKHIALVQQEPALFATSIYENILYGKD--GAS-E----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1091 ~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~s-d----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
.+|+.++|+||+|.+|..|++||+.++.. ... + +++.++++.+++.+.+ ..........|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEV-------KDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhh-------hHHhhcCcccCCHHHHH
Confidence 88999999999999999999999986521 111 1 2344455555554332 22334455689999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999887 9999999999999999999987
Q ss_pred hcCCcH
Q 000830 1243 ENEDGA 1248 (1265)
Q Consensus 1243 ~~~~g~ 1248 (1265)
+++...
T Consensus 233 ~~~~~~ 238 (249)
T PRK14253 233 SNPKDD 238 (249)
T ss_pred cCCCCh
Confidence 644333
No 365
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-40 Score=370.11 Aligned_cols=217 Identities=34% Similarity=0.556 Sum_probs=183.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCC--ChHHHhhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGL--DLKWLRQQ 459 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~--~~~~~r~~ 459 (1265)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +...++++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 3589999999999999999999999999999999999999999999999998764 34567889
Q ss_pred eeEEccCCcccc-ccHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHh
Q 000830 460 IGLVNQEPALFA-TTIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAI 535 (1265)
Q Consensus 460 i~~v~Q~~~lf~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal 535 (1265)
++|++|++.++. .|++||+.++.. .....+..+ .+.+.+..+ |++.........||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999999886 499999987531 112222111 112333333 445555667789999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 536 VKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 536 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
+.+|+++||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999998875 48999999999999865 999999999999999999988654
No 366
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=370.66 Aligned_cols=222 Identities=29% Similarity=0.527 Sum_probs=184.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCC-----cceEEECCeeCCC--CCh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPL-----SGEILLDGNNIKG--LDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~~ 453 (1265)
.|+++|++|+|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 35999999999999999999999999999999999999997 6999999998864 345
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCC--CC-HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDD--AT-MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIA 530 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~~-~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqria 530 (1265)
..+|+.++||+|++.+|+.|++||+.++... .. .++..+.+.. +.+.+ .+.+.........+.+||||||||++
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~--~l~~~-~l~~~l~~~~~~~~~~LS~Gq~qrv~ 157 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEK--SLRQA-ALWDEVKDNLHKSGLALSGGQQQRLC 157 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHH--HHHHh-CCchhhhhHhhCCcccCCHHHHHHHH
Confidence 5778899999999999999999999876321 11 1112111111 11111 22222334466778899999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 531 ISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 531 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14249 158 IARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFSR 236 (251)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999888668999999999999876 899999999999999999988654
No 367
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-40 Score=342.91 Aligned_cols=220 Identities=30% Similarity=0.478 Sum_probs=190.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH-Hhhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW-LRQQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 459 (1265)
-++++|++-.|+. ..+|++|||++++||+++++|+||+||||+++.|+|+.+|.+|+|.++|+|+...+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 4789999999974 46999999999999999999999999999999999999999999999999999998765 5778
Q ss_pred eeEEccCCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
|+||||.-.+|+. ||+||+.+|......++- ......+..+-+|. +......++.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~----~~~~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEA----QERDLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccc----ccccHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999987 999999987532221111 11112223344564 56677888999999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|++|+|||||.+|-|.-.+.|.+.|+++++ +.||++|-++...... |||.+||++|+|+.+|+.+||.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999874 6799999999998755 999999999999999999999876
No 368
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=375.37 Aligned_cols=212 Identities=31% Similarity=0.475 Sum_probs=181.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccC--CCCHHHHhcc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIK--RLNLKSLRKH 1095 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~--~~~l~~lR~~ 1095 (1265)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. ..+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999963 35899999999999999999999999999999999999999999999999985 3445678899
Q ss_pred cEEEecCCC--CCcccHHHHhccCC--CCCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1096 IALVQQEPA--LFATSIYENILYGK--DGASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1096 i~~VpQdp~--LF~gTIreNl~~g~--~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
++||||+|. +|..|+.+|+.++. ...+. +++.++++..++.++. + ....+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-------H----QPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-------c----CCchhCCHHHHHHHHH
Confidence 999999985 67789999997641 12222 2344555555554432 2 2345799999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
||||+.+|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999875 47899999999999965 99999999999999999999876
No 369
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=371.14 Aligned_cols=219 Identities=33% Similarity=0.523 Sum_probs=182.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhc---cCC--CcceEEECCeeCCCC--Ch
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERF---YEP--LSGEILLDGNNIKGL--DL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~---~~~--~~G~i~~~g~~~~~~--~~ 453 (1265)
.|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.++|+++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999963 4589999999999999999999999999999999997 454 589999999998653 34
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCC--C-CHHH----HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDD--A-TMEE----ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~-~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
..+|++++|++|++.+|+.|++||+.++... . ..++ +.++++.. .+++..++.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~-------~l~~~~~~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGA-------ALWDEVKDKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHc-------CCCcchhhhhhCCcccCCHHHH
Confidence 5678899999999999988999999875321 1 1111 12222221 2222233455677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999998
Q ss_pred ccCC
Q 000830 606 ISNP 609 (1265)
Q Consensus 606 ~~~~ 609 (1265)
.+++
T Consensus 233 ~~~~ 236 (250)
T PRK14245 233 FTNP 236 (250)
T ss_pred hcCC
Confidence 7653
No 370
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=374.36 Aligned_cols=220 Identities=33% Similarity=0.536 Sum_probs=185.5
Q ss_pred cccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCC--C
Q 000830 379 SGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKG--L 451 (1265)
Q Consensus 379 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~ 451 (1265)
.+.|+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999963 3589999999999999999999999999999999999984 89999999999864 3
Q ss_pred ChHHHhhheeEEccCCccccccHHHHhccCCCC--C-CH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChH
Q 000830 452 DLKWLRQQIGLVNQEPALFATTIRENILYGKDD--A-TM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGG 524 (1265)
Q Consensus 452 ~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 524 (1265)
+...+|+.++|++|++.+|+.|++||+.++... . .. +++.++++..+ +++...+..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAA-------LWDEVKDRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcC-------CChhHHHHhhCCcccCCHH
Confidence 456778899999999999989999999875321 1 11 12223333322 2222234556778899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcc
Q 000830 525 QKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHE 603 (1265)
Q Consensus 525 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 603 (1265)
||||++|||||+++|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999988778999999999999865 9999999999999999999
Q ss_pred hhccC
Q 000830 604 ELISN 608 (1265)
Q Consensus 604 ~l~~~ 608 (1265)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 88755
No 371
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8.6e-41 Score=364.72 Aligned_cols=202 Identities=33% Similarity=0.530 Sum_probs=172.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCH---HHHhc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNL---KSLRK 1094 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l---~~lR~ 1094 (1265)
|+++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999642 358999999999999999999999999999999999999999999999999987654 34788
Q ss_pred ccEEEecCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1095 HIALVQQEPALFA-TSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1095 ~i~~VpQdp~LF~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
.++||||+|.+|. .|++||+.++.. ..+ ++++.++++..++.+.... ...+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRA-----------LPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------ChhhcCHHHHHHHHH
Confidence 9999999999997 499999986421 122 2345566666665544333 234799999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEE
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKI 1232 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~I 1232 (1265)
||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 47899999999999986 999999999974
No 372
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=372.72 Aligned_cols=222 Identities=31% Similarity=0.511 Sum_probs=188.7
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC-----CcEEEECCcccCC--CC
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPT-----AGKVMVDGIDIKR--LN 1088 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--~~ 1088 (1265)
+.|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.|+.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 35899999999999999999999999999999999999985 8999999999853 34
Q ss_pred HHHHhcccEEEecCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhH
Q 000830 1089 LKSLRKHIALVQQEPALFATSIYENILYGKD--GA-S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQ 1161 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1161 (1265)
...+|+.++|+||++.+|..|++||+.++.. .. + ++.+.++++..++.+++.. ..+.....|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 5678899999999999999999999976421 11 2 2335566666666544332 2345567899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhc-cCEEEEEeC-----CEEE
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKN-ADQISVIES-----GKII 1233 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~-~DrI~vl~~-----G~Iv 1233 (1265)
|||++|||||+++|++|||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999864 47999999999999876 999999999 9999
Q ss_pred EecChhhhhhcCCc
Q 000830 1234 EQGTHSSLVENEDG 1247 (1265)
Q Consensus 1234 e~Gt~~eLl~~~~g 1247 (1265)
+.|+++++.+++..
T Consensus 236 ~~~~~~~~~~~~~~ 249 (261)
T PRK14258 236 EFGLTKKIFNSPHD 249 (261)
T ss_pred EeCCHHHHHhCCCC
Confidence 99999999875444
No 373
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.3e-41 Score=364.31 Aligned_cols=201 Identities=41% Similarity=0.672 Sum_probs=171.7
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEE
Q 000830 1019 ELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIAL 1098 (1265)
Q Consensus 1019 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~ 1098 (1265)
+++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 478999999742 2468999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EecCC--CCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1099 VQQEP--ALFATSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1099 VpQdp--~LF~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
+||+| .++..|++||+.++.. ..+. +++.+.++..++.++. ......||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLR-----------DRSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCHHHHHHHHHHHH
Confidence 99998 3678899999976421 1222 2344455555544333 33446799999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhc-cCEEEEEeCCE
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR-KRTTIIVAHRLSTIKN-ADQISVIESGK 1231 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHRl~ti~~-~DrI~vl~~G~ 1231 (1265)
|+++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999999999998764 7899999999999987 99999999985
No 374
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=371.56 Aligned_cols=219 Identities=28% Similarity=0.513 Sum_probs=184.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCCC--Ch
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKGL--DL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 453 (1265)
.|+++|++|+|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 5899999999963 3599999999999999999999999999999999999763 489999999998765 44
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCCC---CHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDDA---TME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~---~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
...++.++|++|++.+|+.|++||+.++.... ... .+.++++.. .+.+++.+..++.+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~-------~l~~~l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGA-------ALWDEVKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHh-------cCchhhHHHhhcChhhCCHHHH
Confidence 66788899999999999999999999864211 111 122222222 2223334456778889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999988777999999999999965 999999999999999999988
Q ss_pred ccCC
Q 000830 606 ISNP 609 (1265)
Q Consensus 606 ~~~~ 609 (1265)
...+
T Consensus 236 ~~~~ 239 (253)
T PRK14261 236 FENP 239 (253)
T ss_pred HhCC
Confidence 7553
No 375
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=371.80 Aligned_cols=225 Identities=33% Similarity=0.520 Sum_probs=186.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC-----CcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPT-----AGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--~~l 1089 (1265)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 4789999999963 46899999999999999999999999999999999999874 8999999999875 345
Q ss_pred HHHhcccEEEecCCCCCcc-cHHHHhccCCC--CC-CHHHHHHH----HHHhchHHHHHhCCCCccccccCCCCCCChhH
Q 000830 1090 KSLRKHIALVQQEPALFAT-SIYENILYGKD--GA-SEGEVIEA----AKLANAHSFISALPEGYSTKVGERGVQLSGGQ 1161 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~g-TIreNl~~g~~--~~-sd~ei~~a----l~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1161 (1265)
..+|+.++|+||+|.+|.. |++||+.++.. .. .+++..+. ++..++.+. +++.++++ ..+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~---l~~~~~~~----~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE---VKDRLKTP----ATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh---hhhhhcCC----cccCCHHH
Confidence 5778999999999999984 99999976431 11 23333332 223333222 22233443 45799999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSS 1240 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1240 (1265)
|||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999986 99999999999999999999
Q ss_pred hhhcCCcHHHH
Q 000830 1241 LVENEDGAYFK 1251 (1265)
Q Consensus 1241 Ll~~~~g~f~~ 1251 (1265)
+++++...+.+
T Consensus 234 ~~~~~~~~~~~ 244 (252)
T PRK14272 234 LFTNPRDERTE 244 (252)
T ss_pred HHhCcCcHHHH
Confidence 98755554543
No 376
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=372.58 Aligned_cols=219 Identities=29% Similarity=0.463 Sum_probs=184.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCC--CC
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKG--LD 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 452 (1265)
..|+++|++|+|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.+||+++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 46999999999963 469999999999999999999999999999999999997 589999999999864 34
Q ss_pred hHHHhhheeEEccCCccccccHHHHhccCCCC--C-CHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 453 LKWLRQQIGLVNQEPALFATTIRENILYGKDD--A-TME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
...+|+.|+||+|++.+|+.|++||+.++... . ..+ ++.++++..+ +.++.++..+..+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~i~~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAA-------LWDQVKDDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcC-------CCchhhhhhcCCcccCCHHH
Confidence 55678899999999999999999999886321 1 111 1222222222 22222345667788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcch
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEE 604 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 604 (1265)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999865 99999999999999999999
Q ss_pred hccC
Q 000830 605 LISN 608 (1265)
Q Consensus 605 l~~~ 608 (1265)
+...
T Consensus 249 ~~~~ 252 (267)
T PRK14237 249 IFTN 252 (267)
T ss_pred HhcC
Confidence 8764
No 377
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=372.83 Aligned_cols=214 Identities=27% Similarity=0.413 Sum_probs=187.5
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcc
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKH 1095 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 1095 (1265)
..|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...++++
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 36999999999973 358999999999999999999999999999999999999999999999999988888888899
Q ss_pred cEEEecCCCCCc-ccHHHHhccCC-CC---------CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000830 1096 IALVQQEPALFA-TSIYENILYGK-DG---------ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQR 1164 (1265)
Q Consensus 1096 i~~VpQdp~LF~-gTIreNl~~g~-~~---------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQr 1164 (1265)
++|+||++.+|. .|++||+.++. +. ..++.+.++++..++.++.. .....||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLAD-----------QSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCChHHHHH
Confidence 999999998875 69999998642 11 11234566666666654432 3446799999999
Q ss_pred HHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1165 VAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1165 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
++||||++++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998753 7899999999998866 999999999999999999998
Q ss_pred hh
Q 000830 1242 VE 1243 (1265)
Q Consensus 1242 l~ 1243 (1265)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 75
No 378
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=367.73 Aligned_cols=219 Identities=25% Similarity=0.413 Sum_probs=182.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH-Hhhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW-LRQQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 459 (1265)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .++.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 35999999999999999999999999999999999999999999999999998877654 6778
Q ss_pred eeEEccCCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
++|++|++.+|++ |++||+.++......++..+.+ ..+.+.+..+ +........+||||||||++|||||+.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~--~~~l~~~~~l----~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI--KWVYELFPRL----HERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH--HHHHHHHHHH----HHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 9999998864322222222111 1111222111 1123346678999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|+||||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 99999999999999999999999998875 48999999999998755 999999999999999999998643
No 379
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=372.53 Aligned_cols=219 Identities=31% Similarity=0.499 Sum_probs=184.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~l 1089 (1265)
.++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 3589999999999999999999999999999999999974 69999999999853 445
Q ss_pred HHHhcccEEEecCCCCCc-ccHHHHhccCCC---CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhH
Q 000830 1090 KSLRKHIALVQQEPALFA-TSIYENILYGKD---GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQ 1161 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~-gTIreNl~~g~~---~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1161 (1265)
..+|+.++|+||++.+|. .|++||+.++.. ..+ ++.+.++++..++.+.+. ........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVK-------DRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHH
Confidence 678899999999999997 599999976421 111 233455565665543321 22344556899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEe------CCEEEE
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIE------SGKIIE 1234 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~------~G~Ive 1234 (1265)
|||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999998777899999999999865 99999997 899999
Q ss_pred ecChhhhhhcC
Q 000830 1235 QGTHSSLVENE 1245 (1265)
Q Consensus 1235 ~Gt~~eLl~~~ 1245 (1265)
.|++++++..+
T Consensus 234 ~~~~~~~~~~~ 244 (258)
T PRK14241 234 IDDTEKIFSNP 244 (258)
T ss_pred cCCHHHHHhCc
Confidence 99999997643
No 380
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=374.55 Aligned_cols=218 Identities=29% Similarity=0.525 Sum_probs=182.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCC-hHHHhhhe
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLD-LKWLRQQI 460 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~r~~i 460 (1265)
++++|++++|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999963 235999999999999999999999999999999999999999999999999987765 35678899
Q ss_pred eEEccCCc--cccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 461 GLVNQEPA--LFATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 461 ~~v~Q~~~--lf~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
+||+|+|. +++.|+.|||.++... .+.++..+.+ .+.+..+ |++......+..||||||||++|||||+
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~ 152 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRV-----DRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGILT 152 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHH-----HHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 5667999999886421 2222222111 1122222 3444455667789999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 537 KNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 153 MEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999998875 48999999999999988999999999999999999887654
No 381
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=371.45 Aligned_cols=220 Identities=29% Similarity=0.507 Sum_probs=185.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCC--CCh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKG--LDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 453 (1265)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 5899999999963 358999999999999999999999999999999999986 489999999998853 455
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCCC--C---HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDDA--T---MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQR 528 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 528 (1265)
..+|++++||+|++.+|+.|++||+.++.... . .+++.++++..++.+++ +......+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEV-------KDKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhH-------HHHhcCCcccCCHHHHHH
Confidence 67788999999999999889999998864211 1 12223333333333222 223456778999999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEe---------CCEEEE
Q 000830 529 IAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQ---------GRKIVK 598 (1265)
Q Consensus 529 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~---------~G~i~~ 598 (1265)
++|||||+++|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999988777999999999999866 99999998 899999
Q ss_pred eeCcchhccCCc
Q 000830 599 TGSHEELISNPN 610 (1265)
Q Consensus 599 ~g~~~~l~~~~~ 610 (1265)
.|+++|+.+.+.
T Consensus 240 ~~~~~~~~~~~~ 251 (264)
T PRK14243 240 FDRTEKIFNSPQ 251 (264)
T ss_pred eCCHHHHHhCCC
Confidence 999999976543
No 382
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=376.49 Aligned_cols=226 Identities=33% Similarity=0.473 Sum_probs=188.1
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCCC--C
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKRL--N 1088 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~~--~ 1088 (1265)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 36899999999963 358999999999999999999999999999999999864 4999999999998643 3
Q ss_pred HHHHhcccEEEecCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhH
Q 000830 1089 LKSLRKHIALVQQEPALFATSIYENILYGKD--GA-S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQ 1161 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~--~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1161 (1265)
...+|++++||||+|.+|..|++||+.++.. .. + ++++.++++..++.+.+. .........|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS-------DRLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh-------hHhhCChhhCCHHH
Confidence 3467899999999999998999999987521 11 1 123445555555432221 12234556799999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSS 1240 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1240 (1265)
|||++|||||+.+|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999999876 99999999999999999999
Q ss_pred hhhcCCcHHHH
Q 000830 1241 LVENEDGAYFK 1251 (1265)
Q Consensus 1241 Ll~~~~g~f~~ 1251 (1265)
+.+++...|.+
T Consensus 268 ~~~~~~~~~~~ 278 (286)
T PRK14275 268 LFTNPKDRMTE 278 (286)
T ss_pred HHhCCCcHHHH
Confidence 98754444444
No 383
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=370.91 Aligned_cols=223 Identities=32% Similarity=0.528 Sum_probs=183.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCC--CCh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKG--LDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 453 (1265)
.|+++|++|+|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 359999999999999999999999999999999999997 479999999998854 344
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCC--C-CHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDD--A-TME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
..+|+.++|++|++.+|+.|++||+.++... . ..+ ++.++++..+ +...........+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAA-------IWKETKDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcC-------CCcchHHHhccChhhCCHHHH
Confidence 5678889999999999999999999876321 1 111 1222222222 111111234566789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++|||||+++|+++||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999866 999999999999999999998
Q ss_pred ccCCchHH
Q 000830 606 ISNPNSAY 613 (1265)
Q Consensus 606 ~~~~~~~~ 613 (1265)
...+...|
T Consensus 234 ~~~~~~~~ 241 (251)
T PRK14251 234 FIAPKKQI 241 (251)
T ss_pred HhCCCCHH
Confidence 76543333
No 384
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7e-41 Score=364.85 Aligned_cols=198 Identities=31% Similarity=0.532 Sum_probs=169.1
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEE
Q 000830 1019 ELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIAL 1098 (1265)
Q Consensus 1019 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~ 1098 (1265)
+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 35899999999999999999999999999999999999999999999998874 46889999
Q ss_pred EecCCCC---CcccHHHHhccCCCC----------CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1099 VQQEPAL---FATSIYENILYGKDG----------ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1099 VpQdp~L---F~gTIreNl~~g~~~----------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
+||+|.+ |+.|++||+.++... ..++++.++++..++.++... ...+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-----------QIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHH
Confidence 9999986 668999999875321 112345666666666554432 3357999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
+|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999875 57899999999999976 9999999886 56654
No 385
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=378.76 Aligned_cols=224 Identities=30% Similarity=0.527 Sum_probs=183.2
Q ss_pred cccEEEEeEEEECCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCC----C-
Q 000830 379 SGHIEFKDVSFCYPSRP--DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKG----L- 451 (1265)
Q Consensus 379 ~~~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~- 451 (1265)
.+.|+++|++++|+++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 35799999999997432 1358999999999999999999999999999999999999999999999998752 2
Q ss_pred ChHHHhhheeEEccCC--ccccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHH
Q 000830 452 DLKWLRQQIGLVNQEP--ALFATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQ 527 (1265)
Q Consensus 452 ~~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 527 (1265)
+...+|+.|+||+|+| .+|+.|++||+.++... ...++..+.+ .++.+.+ .+|++ .....+.+|||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~--~~ll~~~-~L~~~---~~~~~~~~LS~Gq~q 157 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKV--PELLKLV-QLPED---YVKRSPFELSGGQKR 157 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHH--HHHHHHc-CCChh---HhcCChhhCCHHHHH
Confidence 3456788999999998 46778999999876421 2222222211 1222222 34322 245667889999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcch
Q 000830 528 RIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEE 604 (1265)
Q Consensus 528 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 604 (1265)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 158 rv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 237 (289)
T PRK13645 158 RVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFE 237 (289)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999998875 38999999999998865 99999999999999999888
Q ss_pred hccC
Q 000830 605 LISN 608 (1265)
Q Consensus 605 l~~~ 608 (1265)
+...
T Consensus 238 ~~~~ 241 (289)
T PRK13645 238 IFSN 241 (289)
T ss_pred HhcC
Confidence 7654
No 386
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=374.14 Aligned_cols=220 Identities=29% Similarity=0.545 Sum_probs=184.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.++++|++++|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 34699999999999999999999999999999999999999999999999999877777888999
Q ss_pred eEEccCCc--cccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 461 GLVNQEPA--LFATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 461 ~~v~Q~~~--lf~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
+||+|+|. ++..|++||+.++... .+.++..+. +.+.+..+ |++........+||||||||++|||||+
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDI-----IDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLA 158 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 4567999999876321 122222111 11222222 2333455666799999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 537 KNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 159 ~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 159 LNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999998753 4899999999999888999999999999999998887654
No 387
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.9e-40 Score=368.96 Aligned_cols=221 Identities=23% Similarity=0.416 Sum_probs=184.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH-hhhe
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL-RQQI 460 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 460 (1265)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.... ++.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 358999999999999999999999999999999999999999999999999887766543 4579
Q ss_pred eEEccCCccccc-cHHHHhccCCCCCC-H-HH---HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDDAT-M-EE---ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~~~-~-~~---~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
+|++|++.+|++ |++||+.++..... . .. .........+.+.+..+ |++........+||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999987 99999988642110 0 00 00001111122334333 44455566778999999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998778999999999999976 99999999999999999988764
No 388
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=373.69 Aligned_cols=213 Identities=29% Similarity=0.467 Sum_probs=182.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5899999999963 3599999999999999999999999999999999999999999999999999888888888899
Q ss_pred eEEccCCccccc-cHHHHhccCCCCC----------CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHH
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDDA----------TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRI 529 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 529 (1265)
+|++|++.++.+ |+.||+.++.... ..+++.++++..++ +........+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGL-----------KPLAHRLVDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCC-----------HHHhcCCcccCCHHHHHHH
Confidence 999999877765 9999998763210 11223333333332 2223444568999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhc
Q 000830 530 AISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELI 606 (1265)
Q Consensus 530 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 606 (1265)
+|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 999999999999999999999999999999999998753 7999999999999865 9999999999999999998876
Q ss_pred c
Q 000830 607 S 607 (1265)
Q Consensus 607 ~ 607 (1265)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 4
No 389
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.5e-40 Score=380.59 Aligned_cols=213 Identities=31% Similarity=0.516 Sum_probs=180.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 3589999999999999999999999999999999999999999999999998754 35678999
Q ss_pred EEEecCCCCCc-ccHHHHhccCC--CCCCHHHHH----HHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPALFA-TSIYENILYGK--DGASEGEVI----EAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~LF~-gTIreNl~~g~--~~~sd~ei~----~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
+|+||++.+|. .|++||+.+.. ...+..+.. ++++..++ ++.+++.+ ..||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l-------~~~~~~~~----~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARL-------ESKADVRV----ALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCC-------hhHhcCch----hhCCHHHHHHHHHHH
Confidence 99999999885 69999997421 123333332 23333332 33344444 469999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999875 47899999999999976 999999999999999999999763
No 390
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=377.12 Aligned_cols=221 Identities=30% Similarity=0.547 Sum_probs=182.5
Q ss_pred cEEEEeEEEECCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCC----ChH
Q 000830 381 HIEFKDVSFCYPSRP--DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGL----DLK 454 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~ 454 (1265)
.|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997321 14699999999999999999999999999999999999999999999999998643 245
Q ss_pred HHhhheeEEccCC--ccccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCccccc-ccccCCCCCCChHHHHHH
Q 000830 455 WLRQQIGLVNQEP--ALFATTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFE-TQVGERGIQLSGGQKQRI 529 (1265)
Q Consensus 455 ~~r~~i~~v~Q~~--~lf~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqri 529 (1265)
..++.|+|++|+| .+|..|++||+.++.. ....++..+. +.+.+..+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEK-----ALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6778899999998 5777899999987532 1222222111 11223322 343 234566789999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 530 AISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 530 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +|.|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999875 48999999999999865 99999999999999999988765
Q ss_pred C
Q 000830 608 N 608 (1265)
Q Consensus 608 ~ 608 (1265)
.
T Consensus 235 ~ 235 (287)
T PRK13641 235 D 235 (287)
T ss_pred C
Confidence 3
No 391
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=368.88 Aligned_cols=218 Identities=23% Similarity=0.430 Sum_probs=184.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH-Hhhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW-LRQQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 459 (1265)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .|+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3789999999963 35999999999999999999999999999999999999999999999999998777644 5778
Q ss_pred eeEEccCCccccc-cHHHHhccCCCC---CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHh
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDD---ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAI 535 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal 535 (1265)
++|++|++.+|+. |++||+.++... .+.++. ...+.+.+..+ |++........+||||||||++|||||
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999999885 999999875321 111111 11223344444 455556677789999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 536 VKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 536 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
+.+|++|||||||++||+.+...+.+.+.++. +|+|+|++||+++.+.. ||++++|++|++++.|++++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999998875 48999999999987765 999999999999999999888653
No 392
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=371.86 Aligned_cols=219 Identities=31% Similarity=0.509 Sum_probs=182.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC--C---CcceEEECCeeCCCC--Ch
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE--P---LSGEILLDGNNIKGL--DL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~~--~~ 453 (1265)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 358999999999999999999999999999999999954 6 599999999998643 34
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCC--C-CHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDD--A-TME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
..+|+.++||+|++.+|+.|++||+.++... . ..+ ++.++++..++ ..+..+.....+.+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASI-------WDEVKDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCC-------chhHHHHHhcCcccCCHHHH
Confidence 5678899999999999999999999875311 1 111 12222222221 11223345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988768999999999998865 999999999999999999998
Q ss_pred ccCC
Q 000830 606 ISNP 609 (1265)
Q Consensus 606 ~~~~ 609 (1265)
.+.+
T Consensus 235 ~~~~ 238 (252)
T PRK14239 235 FMNP 238 (252)
T ss_pred HhCC
Confidence 7653
No 393
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=375.95 Aligned_cols=213 Identities=37% Similarity=0.564 Sum_probs=182.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCC--CCHHHHhcc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKR--LNLKSLRKH 1095 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--~~l~~lR~~ 1095 (1265)
|+++||+++|++ ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2358999999999999999999999999999999999999999999999999852 234567899
Q ss_pred cEEEecCC--CCCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1096 IALVQQEP--ALFATSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1096 i~~VpQdp--~LF~gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
|+|+||+| .+|..|++||+.++.. ..+. +++.++++..++.++. + ....+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-------~----~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFE-------N----KPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhh-------c----CChhhCCHHHHHHHHH
Confidence 99999998 4788999999986421 1222 3345555555554332 2 2345799999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR-KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
|||++++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999998754 7899999999999875 99999999999999999999876
No 394
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=369.98 Aligned_cols=223 Identities=26% Similarity=0.490 Sum_probs=184.1
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC--C---CcceEEECCeeCCCC--C
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE--P---LSGEILLDGNNIKGL--D 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~~--~ 452 (1265)
+.|+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++... +
T Consensus 3 ~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 56999999999963 359999999999999999999999999999999999986 4 689999999998643 3
Q ss_pred hHHHhhheeEEccCCcccc-ccHHHHhccCCCC---CCHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChH
Q 000830 453 LKWLRQQIGLVNQEPALFA-TTIRENILYGKDD---ATME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGG 524 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~-~ti~~ni~~~~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 524 (1265)
...+|+.++||+|++.+|. .|++||+.++... .+.+ ++.++++..++.+ .+....+..+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWD-------EVKDRLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhhHHhhCCcCcCCHH
Confidence 4567889999999999998 4999999875311 1111 1222222222211 1222345567899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcc
Q 000830 525 QKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHE 603 (1265)
Q Consensus 525 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 603 (1265)
||||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 9999999999999999999
Q ss_pred hhccCCchH
Q 000830 604 ELISNPNSA 612 (1265)
Q Consensus 604 ~l~~~~~~~ 612 (1265)
++...+...
T Consensus 233 ~~~~~~~~~ 241 (252)
T PRK14256 233 KIFTTPEKK 241 (252)
T ss_pred HHHhCCCcH
Confidence 987654433
No 395
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.7e-40 Score=366.27 Aligned_cols=212 Identities=36% Similarity=0.568 Sum_probs=173.9
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCH---HHHh
Q 000830 1018 IELRGVHFSYPSRP-EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNL---KSLR 1093 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l---~~lR 1093 (1265)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 1268999999999999999999999999999999999999999999999999988763 5778
Q ss_pred cccEEEecCC--CCC-cccHHHHhccCCC----CCCHHHHHHHHHHhchHHHHHhCCCCcc-ccccCCCCCCChhHHHHH
Q 000830 1094 KHIALVQQEP--ALF-ATSIYENILYGKD----GASEGEVIEAAKLANAHSFISALPEGYS-TKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1094 ~~i~~VpQdp--~LF-~gTIreNl~~g~~----~~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~LSgGQkQrl 1165 (1265)
++++|+||+| .++ ..|+++|+.++.. ...+++...+. .+.++.+ |++ ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 9999999999 344 5799999975311 11111111110 1223333 332 234455678999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
+|||||+.+|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998764 7899999999999985 9999999999998865
No 396
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=368.19 Aligned_cols=205 Identities=30% Similarity=0.446 Sum_probs=174.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++.
T Consensus 11 ~~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~ 82 (257)
T PRK11247 11 TPLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EARED 82 (257)
T ss_pred CcEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCc
Confidence 35999999999963 35999999999999999999999999999999999999999999999998753 45778
Q ss_pred eeEEccCCcccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 460 IGLVNQEPALFA-TTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 460 i~~v~Q~~~lf~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
++|++|++.+|+ .|++||+.++......+++.++++..+ ++......+.+||||||||++|||||+++
T Consensus 83 i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LSgGqkqrl~laraL~~~ 151 (257)
T PRK11247 83 TRLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVG-----------LADRANEWPAALSGGQKQRVALARALIHR 151 (257)
T ss_pred eEEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcC-----------ChhHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999999987 599999988643212233333333332 33344566788999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcc
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHE 603 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 603 (1265)
|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 152 p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 152 PGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999999998874 37999999999999865 9999999999999988765
No 397
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=371.53 Aligned_cols=220 Identities=25% Similarity=0.492 Sum_probs=184.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHH-hcc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSL-RKH 1095 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l-R~~ 1095 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 5899999999963 468999999999999999999999999999999999999999999999999988776554 456
Q ss_pred cEEEecCCCCCcc-cHHHHhccCCCCCC--------------HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChh
Q 000830 1096 IALVQQEPALFAT-SIYENILYGKDGAS--------------EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGG 1160 (1265)
Q Consensus 1096 i~~VpQdp~LF~g-TIreNl~~g~~~~s--------------d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1160 (1265)
++|+||+|.+|.+ |++||+.++..... +.+..++ ...+.++++.+ |++........+||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~--gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERV--GLLEHANRQAGNLAYG 157 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhC--ChhhhhhCChhhCCHH
Confidence 9999999999986 99999987521100 0000000 11123344444 5555556667789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 000830 1161 QKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGT 1237 (1265)
Q Consensus 1161 QkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt 1237 (1265)
||||++||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~ 237 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGT 237 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999999999999999998753 7899999999999976 99999999999999999
Q ss_pred hhhhhh
Q 000830 1238 HSSLVE 1243 (1265)
Q Consensus 1238 ~~eLl~ 1243 (1265)
++++.+
T Consensus 238 ~~~~~~ 243 (255)
T PRK11300 238 PEEIRN 243 (255)
T ss_pred HHHHhh
Confidence 999875
No 398
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=371.74 Aligned_cols=219 Identities=31% Similarity=0.534 Sum_probs=181.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCCCC--hH
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKGLD--LK 454 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~~--~~ 454 (1265)
-+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 478999999963 458999999999999999999999999999999999986 47999999999886543 34
Q ss_pred HHhhheeEEccCCccccccHHHHhccCCC--CC--CHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 455 WLRQQIGLVNQEPALFATTIRENILYGKD--DA--TME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 455 ~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~--~~--~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
.+|++++||+|++.+|+.|++||+.++.. .. ..+ ++.++++..+ +.+.+.+.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVG-------LWEELGDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcC-------CCchhhhHhhcChhhCCHHHH
Confidence 57889999999999999999999987521 11 111 1222222222 221122345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++|||||+++|++|||||||++||+.+...+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999875 999999999999999999998
Q ss_pred ccCCc
Q 000830 606 ISNPN 610 (1265)
Q Consensus 606 ~~~~~ 610 (1265)
.+.+.
T Consensus 236 ~~~~~ 240 (251)
T PRK14244 236 FKNPQ 240 (251)
T ss_pred hcCCC
Confidence 76543
No 399
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=376.47 Aligned_cols=220 Identities=29% Similarity=0.514 Sum_probs=182.4
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCC----ChHH
Q 000830 382 IEFKDVSFCYPSRP--DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGL----DLKW 455 (1265)
Q Consensus 382 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~ 455 (1265)
|+++||+|+|++.. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997422 13599999999999999999999999999999999999999999999999998754 3466
Q ss_pred HhhheeEEccCC--ccccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCccccc-ccccCCCCCCChHHHHHHH
Q 000830 456 LRQQIGLVNQEP--ALFATTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFE-TQVGERGIQLSGGQKQRIA 530 (1265)
Q Consensus 456 ~r~~i~~v~Q~~--~lf~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqria 530 (1265)
+|+.|+|++|++ .+|+.|++||+.++.. ..+.++..+.+ .+.+..+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALA-----REKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 6788899999987532 12233222211 1222222 232 2345667789999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 531 ISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 531 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|||||+.+|++|||||||++||+.+...+.+.|.++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999998875 48999999999999865 999999999999999999888654
No 400
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.2e-40 Score=381.20 Aligned_cols=217 Identities=27% Similarity=0.457 Sum_probs=179.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ....|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999998653 35678899
Q ss_pred eEEccCCcccc-ccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 461 GLVNQEPALFA-TTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 461 ~~v~Q~~~lf~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
+||+|++.++. .|++||+.+... ..+..+..+.+ .++.+.+ .+++.. .....+||||||||++|||||+.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~--~~ll~~~-~l~~~~----~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVI--PSLLEFA-RLESKA----DVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHH--HHHHHHC-CChhHh----cCchhhCCHHHHHHHHHHHHHhc
Confidence 99999999886 499999975221 12222222211 1122221 333333 34456899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999998875 48999999999999875 999999999999999999888643
No 401
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-40 Score=375.13 Aligned_cols=217 Identities=28% Similarity=0.477 Sum_probs=182.9
Q ss_pred cEEEEeEEEECCCCC---CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCC-hHHH
Q 000830 381 HIEFKDVSFCYPSRP---DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLD-LKWL 456 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~---~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~ 456 (1265)
-++++|++|+|++.. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.. ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997422 246999999999999999999999999999999999999999999999999987643 3567
Q ss_pred hhheeEEccCCc--cccccHHHHhccCCCC--CCHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHH
Q 000830 457 RQQIGLVNQEPA--LFATTIRENILYGKDD--ATME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQR 528 (1265)
Q Consensus 457 r~~i~~v~Q~~~--lf~~ti~~ni~~~~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 528 (1265)
|++++||+|+|. ++..|+.||+.|+... .+.. ++.++++..+ +.........+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g-----------L~~~~~~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVG-----------MYEYRRHAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCC-----------CHhHhhCCcccCCHHHHHH
Confidence 889999999984 6767999999986321 1222 2222233332 3333445567899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhc
Q 000830 529 IAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELI 606 (1265)
Q Consensus 529 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~ 606 (1265)
++|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999874 389999999999999889999999999999999999987
Q ss_pred cC
Q 000830 607 SN 608 (1265)
Q Consensus 607 ~~ 608 (1265)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 54
No 402
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.1e-40 Score=378.62 Aligned_cols=212 Identities=25% Similarity=0.462 Sum_probs=183.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 468999999999999999999999999999999999999999999999999977 4467889999
Q ss_pred EEecCCCCCcc-cHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFAT-SIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||+|.+|.+ |++||+.+... ..+. +++.++++.. |++........+||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELV-----------GLRPEQHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHC-----------CCchHhcCchhhCCHHHHHHHHHHHH
Confidence 99999999976 99999975321 1222 2333333333 34444445567899999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
|+++|++|||||||++||+.+.+.+++.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999998778999999999999877 999999999999999999999763
No 403
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.2e-40 Score=371.11 Aligned_cols=212 Identities=27% Similarity=0.445 Sum_probs=184.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 789999999963 46899999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEecCCC-CCcccHHHHhccCCCC----------CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000830 1098 LVQQEPA-LFATSIYENILYGKDG----------ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVA 1166 (1265)
Q Consensus 1098 ~VpQdp~-LF~gTIreNl~~g~~~----------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrla 1166 (1265)
|+||++. .+..|++||+.++... ..++++.++++..++.+.. ......||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLA-----------DRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCHHHHHHHH
Confidence 9999996 4567999999875210 0122455566666554432 2344579999999999
Q ss_pred HHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1167 IARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR-KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1167 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
||||++.+|+++||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 99999999999999999999999999999999998754 6899999999999965 99999999999999999999865
No 404
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-40 Score=364.07 Aligned_cols=208 Identities=32% Similarity=0.527 Sum_probs=183.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++||+++|+. . ..|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 789999999963 2 249999999999999999999999999999999999999999999999886654 357899
Q ss_pred EEecCCCCCcc-cHHHHhccCC-CC-----CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFAT-SIYENILYGK-DG-----ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~-~~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||++.+|.+ |++||+.++. +. ..++++.++++..++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999985 9999998642 11 12346778888888877666554 3699999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhh
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~ 1243 (1265)
++++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999998753 7899999999999876 99999999999999999999986
No 405
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-40 Score=360.02 Aligned_cols=201 Identities=33% Similarity=0.546 Sum_probs=175.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5799999999632 2 39999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEecCCCCCcc-cHHHHhccCCC-C-----CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFAT-SIYENILYGKD-G-----ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~~-~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||+|.+|.+ |++||+.++.. . ..++++.++++..++.+.....| .+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 99999986532 1 12446777788877766655543 4799999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
++++|++|||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998753 7899999999999976 9999999999998865
No 406
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-40 Score=368.86 Aligned_cols=228 Identities=29% Similarity=0.491 Sum_probs=190.2
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEEC------CcccCCCCH
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVD------GIDIKRLNL 1089 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~id------G~di~~~~l 1089 (1265)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |.++.+.+.
T Consensus 9 ~~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~ 85 (257)
T PRK14246 9 DVFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDA 85 (257)
T ss_pred hheeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCH
Confidence 35999999999963 358999999999999999999999999999999999999998666655 477777777
Q ss_pred HHHhcccEEEecCCCCCcc-cHHHHhccCCC--CC-CHHH----HHHHHHHhchHHHHHhCCCCccccccCCCCCCChhH
Q 000830 1090 KSLRKHIALVQQEPALFAT-SIYENILYGKD--GA-SEGE----VIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQ 1161 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~g-TIreNl~~g~~--~~-sd~e----i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQ 1161 (1265)
..+|++++|+||+|.+|.+ |+++|+.++.. .. ++++ +.++++..++.+++. ......+..||+||
T Consensus 86 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~ 158 (257)
T PRK14246 86 IKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVY-------DRLNSPASQLSGGQ 158 (257)
T ss_pred HHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccch-------hhhcCCcccCCHHH
Confidence 7889999999999999976 99999986521 11 2223 344555555533221 12334566799999
Q ss_pred HHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000830 1162 KQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSS 1240 (1265)
Q Consensus 1162 kQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~e 1240 (1265)
|||++||||++++|++|||||||++||+.++..+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 159 ~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~ 238 (257)
T PRK14246 159 QQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNE 238 (257)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999999988778999999999999955 99999999999999999999
Q ss_pred hhhcCCcHHHHHH
Q 000830 1241 LVENEDGAYFKLI 1253 (1265)
Q Consensus 1241 Ll~~~~g~f~~l~ 1253 (1265)
+.+++...|.+.+
T Consensus 239 ~~~~~~~~~~~~~ 251 (257)
T PRK14246 239 IFTSPKNELTEKY 251 (257)
T ss_pred HHhCCCcHHHHHH
Confidence 9876555565544
No 407
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.5e-40 Score=371.08 Aligned_cols=229 Identities=24% Similarity=0.427 Sum_probs=189.6
Q ss_pred cEEEEeEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHH
Q 000830 1017 TIELRGVHFSYPSR------PEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLK 1090 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~ 1090 (1265)
.|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999632 124689999999999999999999999999999999999999999999999999765666
Q ss_pred HHhcccEEEecCCC--CCcc-cHHHHhccCC---CCCC----HHHHHHHHHHhchH-HHHHhCCCCccccccCCCCCCCh
Q 000830 1091 SLRKHIALVQQEPA--LFAT-SIYENILYGK---DGAS----EGEVIEAAKLANAH-SFISALPEGYSTKVGERGVQLSG 1159 (1265)
Q Consensus 1091 ~lR~~i~~VpQdp~--LF~g-TIreNl~~g~---~~~s----d~ei~~al~~a~l~-~~i~~lp~Gldt~vge~G~~LSg 1159 (1265)
..+++++|+||+|. ++.. |+.+|+.++. .... ++++.++++..++. +... . ...+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHAS-------Y----YPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHh-------c----CchhcCH
Confidence 66788999999985 4443 8899986421 1111 24566667777663 2222 2 2357999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1160 GQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1160 GQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
|||||++|||||+++|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999999753 7899999999999987 9999999999999999
Q ss_pred ChhhhhhcC-CcHHHHHHHHh
Q 000830 1237 THSSLVENE-DGAYFKLINLQ 1256 (1265)
Q Consensus 1237 t~~eLl~~~-~g~f~~l~~~~ 1256 (1265)
+++++.+.+ ...+++++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhc
Confidence 999998743 34566777643
No 408
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=373.91 Aligned_cols=215 Identities=29% Similarity=0.493 Sum_probs=182.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
-++++|++++|+++ .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++++
T Consensus 3 ~l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 37899999999632 3589999999999999999999999999999999999999999999999999877777888899
Q ss_pred eEEccCC--ccccccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 461 GLVNQEP--ALFATTIRENILYGKD--DATMEE----ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 461 ~~v~Q~~--~lf~~ti~~ni~~~~~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
+||+|+| .+|+.|+.||+.++.. ..+.++ +.++++..++ .......+..||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~Gq~qrl~la 149 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGL-----------EELRDRVPHHLSGGEKKRVAIA 149 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCC-----------hhHhcCCcccCCHHHHHHHHHH
Confidence 9999998 4777899999987532 122222 2222333222 2233445678999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-ccCEEEEEeCCEEEEeeCcchhccC
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIR-NADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 999999999999999999999999999999988753 899999999999985 5999999999999999999998764
No 409
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-40 Score=373.36 Aligned_cols=216 Identities=29% Similarity=0.511 Sum_probs=184.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCc---ceEEECCeeCCCCChHHHh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLS---GEILLDGNNIKGLDLKWLR 457 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~---G~i~~~g~~~~~~~~~~~r 457 (1265)
.|+++|++|+|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...++
T Consensus 5 ~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 5 IVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred eEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 58999999999642 2459999999999999999999999999999999999999998 8999999999877777788
Q ss_pred hheeEEccCCc--cccccHHHHhccCCCC--CCHHH----HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHH
Q 000830 458 QQIGLVNQEPA--LFATTIRENILYGKDD--ATMEE----ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRI 529 (1265)
Q Consensus 458 ~~i~~v~Q~~~--lf~~ti~~ni~~~~~~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 529 (1265)
++|+||+|+|. +++.|+.|||.++... .+.++ +.++++..+ ++........+||||||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~-----------L~~~~~~~~~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVG-----------MLDYIDSEPANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCC-----------ChhHhcCCcccCCHHHHHHH
Confidence 89999999984 5677999999886422 22322 222233322 33344556679999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhcc
Q 000830 530 AISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 530 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999988753 899999999999998899999999999999999988865
Q ss_pred C
Q 000830 608 N 608 (1265)
Q Consensus 608 ~ 608 (1265)
.
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 4
No 410
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=372.10 Aligned_cols=220 Identities=32% Similarity=0.533 Sum_probs=183.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.++++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999743 24589999999999999999999999999999999999999999999999999888888888999
Q ss_pred eEEccCCc-cc-cccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 461 GLVNQEPA-LF-ATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 461 ~~v~Q~~~-lf-~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
+|++|+|. +| ..|+++|+.++... ...++..+. ...+.+.+ |+.......+.+||||||||++||||++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~-----~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRR--VSEALKQV-----DMLERADYEPNALSGGQKQRVAIAGVLA 158 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHH--HHHHHHHc-----CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 44 45999999886432 122222111 11111211 1222334566789999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhccCEEEEEeCCEEEEeeCcchhccC
Q 000830 537 KNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRNADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 159 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 159 LNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999988753 7899999999999888999999999999999999988654
No 411
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-41 Score=335.32 Aligned_cols=219 Identities=29% Similarity=0.484 Sum_probs=181.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
+++.+++++|++ ...+++||||+++.||+++|.|||||||||++++|..++.|++|+|++||.|... ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 678999999974 3458999999999999999999999999999999999999999999999999765 4667888999
Q ss_pred EEccCCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000830 462 LVNQEPALFAT-TIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPS 540 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~ 540 (1265)
+++-+.-|+.. |++|||.|...-.......-.++.+++.+.+ +++.....+..++|-|+||||+|||||++||+
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l-----~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~ 153 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRL-----QLLEYLDRRVGEFSTGMKQKVAIARALVHDPS 153 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh-----ChHHHHHHHHhhhchhhHHHHHHHHHHhcCCC
Confidence 99988888876 9999998743211111111123333332222 22333344455799999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHHcC-CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 541 ILLLDEATSALDAESENSVQEALDRVMV-GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 541 illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
+++||||||+||..+.+.+.+.+.+++. |++||+.||.+++++. ||+|+++++|+++..|+.+++.++
T Consensus 154 i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 154 ILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred eEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999998875 9999999999999985 999999999999999999887653
No 412
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=8e-40 Score=366.97 Aligned_cols=227 Identities=26% Similarity=0.449 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcc-----cCCCCHHH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGID-----IKRLNLKS 1091 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~~~l~~ 1091 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999974 358999999999999999999999999999999999999999999999999 87776554
Q ss_pred ----HhcccEEEecCCC--CC-cccHHHHhccCC---CCCCHHHHHHHHHHhchHHHHHhCCCCcc-ccccCCCCCCChh
Q 000830 1092 ----LRKHIALVQQEPA--LF-ATSIYENILYGK---DGASEGEVIEAAKLANAHSFISALPEGYS-TKVGERGVQLSGG 1160 (1265)
Q Consensus 1092 ----lR~~i~~VpQdp~--LF-~gTIreNl~~g~---~~~sd~ei~~al~~a~l~~~i~~lp~Gld-t~vge~G~~LSgG 1160 (1265)
+|+.++|+||++. ++ ..|+.+|+.+.. ......++.+ ...++++.+ |++ +.....+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3668999999984 33 348888886421 1111122211 234555555 343 3456677889999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 000830 1161 QKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGT 1237 (1265)
Q Consensus 1161 QkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt 1237 (1265)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998754 7899999999999985 99999999999999999
Q ss_pred hhhhhhcCCcHHHHHH
Q 000830 1238 HSSLVENEDGAYFKLI 1253 (1265)
Q Consensus 1238 ~~eLl~~~~g~f~~l~ 1253 (1265)
++++..++...|.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~ 251 (258)
T PRK11701 236 TDQVLDDPQHPYTQLL 251 (258)
T ss_pred HHHHhcCCCCHHHHHH
Confidence 9999875555565543
No 413
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-40 Score=364.33 Aligned_cols=209 Identities=33% Similarity=0.498 Sum_probs=171.6
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 382 IEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 382 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
|+++|++++|++.. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997411 1469999999999999999999999999999999999999999999999998763 35789
Q ss_pred eEEccCCcccc-ccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 461 GLVNQEPALFA-TTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 461 ~~v~Q~~~lf~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
+||+|++.+|+ .|++||+.++... ...++.. ..+.+.+..+ |++........+||||||||++|||||+.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEAR-----ERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999987 5999999875321 1111111 1112223322 33334455667899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEe--CCEEEEeeCc
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQ--GRKIVKTGSH 602 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~--~G~i~~~g~~ 602 (1265)
+|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|+ +|+++++++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999998874 37999999999998765 99999999 7999998864
No 414
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3e-40 Score=363.84 Aligned_cols=208 Identities=30% Similarity=0.441 Sum_probs=177.5
Q ss_pred cEEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH---H
Q 000830 1017 TIELRGVHFSYPSRPE-VVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS---L 1092 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---l 1092 (1265)
.|+++||+++|++... .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999974321 35899999999999999999999999999999999999999999999999998877643 2
Q ss_pred -hcccEEEecCCCCCcc-cHHHHhccCC--CCCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000830 1093 -RKHIALVQQEPALFAT-SIYENILYGK--DGAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQR 1164 (1265)
Q Consensus 1093 -R~~i~~VpQdp~LF~g-TIreNl~~g~--~~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQr 1164 (1265)
+++++|+||+|.+|.+ |++||+.++. ...+ .+++.++++..++.++.... ...||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHL-----------PAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHH
Confidence 3689999999999875 9999997531 1111 23556666666665554433 34799999999
Q ss_pred HHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEeCCEEEEe
Q 000830 1165 VAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIESGKIIEQ 1235 (1265)
Q Consensus 1165 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~~G~Ive~ 1235 (1265)
++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+..||++++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999998753 7899999999999988999999999999874
No 415
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=370.38 Aligned_cols=212 Identities=27% Similarity=0.489 Sum_probs=182.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
++++|++++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 45999999999999999999999999999999999999999999999999988888788888999
Q ss_pred EEccCCccccc-cHHHHhccCCCC-------CC---HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHH
Q 000830 462 LVNQEPALFAT-TIRENILYGKDD-------AT---MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIA 530 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~~-------~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqria 530 (1265)
|++|++.++.+ |+.||+.++... .. .+++.++++.. |++......+..||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQT-----------RINHLADRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHc-----------CCHHHHcCCcccCCHHHHHHHH
Confidence 99999998876 999999886321 01 11222222222 2233344566789999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 531 ISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 531 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
||||++.+|++|||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999999999999998875 48999999999999865 99999999999999999988864
No 416
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=372.26 Aligned_cols=223 Identities=27% Similarity=0.508 Sum_probs=186.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCCCC-hH
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKGLD-LK 454 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~-~~ 454 (1265)
.++++||+|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999973 4589999999999999999999999999999999999986 7999999999987653 45
Q ss_pred HHhhheeEEccCCccccccHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 455 WLRQQIGLVNQEPALFATTIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 455 ~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
.+|++++|++|++.+|+.|++||+.++.. ..+.++..+.+ ..+.+.+ .+++.+++.....+.+||||||||++|
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~--~~~l~~~-~l~~~~~~~l~~~~~~LSgGq~qrl~L 174 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA--QARLTEV-GLWDAVKDRLSDSPFRLSGGQQQLLCL 174 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH--HHHHHHc-CCCchhhhHhhCCcccCCHHHHHHHHH
Confidence 67889999999999999999999987632 12333332211 1111111 233333345567788999999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCC
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNP 609 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 609 (1265)
||||+.+|++|||||||++||+.+.+.+.+.|.++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.+.+
T Consensus 175 Aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 253 (276)
T PRK14271 175 ARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSP 253 (276)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCc
Confidence 99999999999999999999999999999999988767899999999999875 9999999999999999999997653
No 417
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=366.98 Aligned_cols=216 Identities=28% Similarity=0.499 Sum_probs=180.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCC------CCChHH
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIK------GLDLKW 455 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~------~~~~~~ 455 (1265)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ......
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 35999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhhheeEEccCCccccc-cHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 456 LRQQIGLVNQEPALFAT-TIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 456 ~r~~i~~v~Q~~~lf~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
+|++|+|++|++.+|++ |+.||+.++.. ....++.. ..+.+.+..+ |++........+||||||||++|
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~l 152 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAI 152 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 78899999999999976 99999975311 11122211 1122333333 44555666778999999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
||||+.+|++|||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 999999999999999999999999999999998875 48999999999999865 99999999999999999888754
No 418
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.9e-40 Score=348.31 Aligned_cols=172 Identities=45% Similarity=0.753 Sum_probs=162.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++. ..++++|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999742 245899999999999999999999999999999999999999999999999999998889999999
Q ss_pred EEecCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000830 1098 LVQQEPALFATSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEI 1177 (1265)
Q Consensus 1098 ~VpQdp~LF~gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1177 (1265)
|++|+|.+|++|++||+ ||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 999999999999999999999
Q ss_pred EEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhccCEEEEEeCCEE
Q 000830 1178 LLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKNADQISVIESGKI 1232 (1265)
Q Consensus 1178 LlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~~DrI~vl~~G~I 1232 (1265)
|||||||++||+.+...+.+.|++.. +++|+|++||+++.+..||+|++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999999875 47899999999999988999999999974
No 419
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-40 Score=370.64 Aligned_cols=221 Identities=33% Similarity=0.510 Sum_probs=188.5
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCcEEEECCcccCC--CC
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP-----TAGKVMVDGIDIKR--LN 1088 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~ 1088 (1265)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 37999999999973 3589999999999999999999999999999999999864 58999999999864 34
Q ss_pred HHHHhcccEEEecCCCCCcccHHHHhccCCCC-----CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHH
Q 000830 1089 LKSLRKHIALVQQEPALFATSIYENILYGKDG-----ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQ 1163 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1163 (1265)
...+|++++|+||++.+|..|+++|+.++... ..++++.++++.+++.+.+.. ........|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHH
Confidence 45678999999999999989999999875211 123445566666666544432 233455679999999
Q ss_pred HHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEe---------CCEEE
Q 000830 1164 RVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIE---------SGKII 1233 (1265)
Q Consensus 1164 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~---------~G~Iv 1233 (1265)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999998778999999999999975 99999997 89999
Q ss_pred EecChhhhhhcCC
Q 000830 1234 EQGTHSSLVENED 1246 (1265)
Q Consensus 1234 e~Gt~~eLl~~~~ 1246 (1265)
+.|+++++..++.
T Consensus 249 ~~g~~~~~~~~~~ 261 (274)
T PRK14265 249 EFSPTEQMFGSPQ 261 (274)
T ss_pred EeCCHHHHHhCCC
Confidence 9999999976444
No 420
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-40 Score=364.22 Aligned_cols=211 Identities=33% Similarity=0.580 Sum_probs=183.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++ . +|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 l~~~~l~~~~~~---~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE---F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC---c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 578999999963 2 7999999999999999999999999999999999999999999999999987654 378999
Q ss_pred EEecCCCCCc-ccHHHHhccCCCC--CC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFA-TSIYENILYGKDG--AS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~-gTIreNl~~g~~~--~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||++.+|. .|++||+.++... .+ ++++.++++..++.++..+. ...||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRK-----------PETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcC-----------cccCCHHHHHHHHHHHH
Confidence 9999999995 7999999864311 11 23456667677766555443 35799999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcC
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENE 1245 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~ 1245 (1265)
++++|++|+|||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 9999999999999999999999999999998754 7899999999999876 9999999999999999999998743
No 421
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.7e-40 Score=362.50 Aligned_cols=204 Identities=30% Similarity=0.467 Sum_probs=173.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH---Hhc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS---LRK 1094 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---lR~ 1094 (1265)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+++... +|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 235899999999999999999999999999999999999999999999999998776543 688
Q ss_pred ccEEEecCCCCC-cccHHHHhccCC--CCCCHH----HHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1095 HIALVQQEPALF-ATSIYENILYGK--DGASEG----EVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1095 ~i~~VpQdp~LF-~gTIreNl~~g~--~~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
.++|+||+|.+| ..|++||+.++. ...+++ ++.++++..++.+... ....+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAK-----------NFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCchhCCHHHHHHHHH
Confidence 999999999874 679999998742 122333 3445555555544433 3345799999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEE
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIE 1234 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive 1234 (1265)
|||++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999875 46899999999999987 99999999999854
No 422
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.6e-40 Score=362.81 Aligned_cols=211 Identities=27% Similarity=0.461 Sum_probs=179.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++++|++ .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 5899999999963 3599999999999999999999999999999999999999999999999999888887788899
Q ss_pred eEEccCCccccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCccccc-ccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 461 GLVNQEPALFATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFE-TQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 461 ~~v~Q~~~lf~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
+|++|++.+|+.|++||+.++... ...++ .+ +.+.+..+ |+. +.....+.+||||||||++|||||++
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~----~~---~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDP----AI---FLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHH----HH---HHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 999999999989999999864210 11110 11 11233333 232 34567778999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhccCEEEEE-eCCEEEEeeCcc
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRNADVIAVV-QGRKIVKTGSHE 603 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~~l-~~G~i~~~g~~~ 603 (1265)
+|+++||||||++||+.+...+.+.|.++. .++|+|++||+++.++.||+|++| +++..+++|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999999874 378999999999999889999999 477788899885
No 423
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.4e-40 Score=369.75 Aligned_cols=219 Identities=30% Similarity=0.526 Sum_probs=181.9
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCC--------
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGL-------- 451 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~-------- 451 (1265)
+.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 46999999999963 4589999999999999999999999999999999999999999999999988542
Q ss_pred -----ChHHHhhheeEEccCCccccc-cHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCcccccccc-cCCCCCC
Q 000830 452 -----DLKWLRQQIGLVNQEPALFAT-TIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFETQV-GERGIQL 521 (1265)
Q Consensus 452 -----~~~~~r~~i~~v~Q~~~lf~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-~~~g~~L 521 (1265)
....++++++||+|++.+|+. |++||+.++.. .....+..+ .+.+.++.+ |+.... ...+.+|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARE-----RAVKYLAKV--GIDERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccC
Confidence 134667889999999999975 99999986421 111111111 111223332 333332 5567889
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEe
Q 000830 522 SGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKT 599 (1265)
Q Consensus 522 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~ 599 (1265)
|||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999875 48999999999999986 999999999999999
Q ss_pred eCcchhccC
Q 000830 600 GSHEELISN 608 (1265)
Q Consensus 600 g~~~~l~~~ 608 (1265)
|+++++...
T Consensus 234 ~~~~~~~~~ 242 (257)
T PRK10619 234 GAPEQLFGN 242 (257)
T ss_pred CCHHHhhhC
Confidence 999988754
No 424
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-40 Score=368.22 Aligned_cols=218 Identities=29% Similarity=0.524 Sum_probs=183.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCC-CCChH
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIK-GLDLK 454 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~-~~~~~ 454 (1265)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999973 4589999999999999999999999999999999999986 5999999999885 44566
Q ss_pred HHhhheeEEccCCccccccHHHHhccCCCC--CC-HH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHH
Q 000830 455 WLRQQIGLVNQEPALFATTIRENILYGKDD--AT-ME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQ 527 (1265)
Q Consensus 455 ~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~~-~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 527 (1265)
.+|+.++|++|++.+|+.|++||+.++... .. .+ ++.++++..+ +.+++.+.....+.+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAA-------LWDEVKDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcC-------CchhhhHHhhcCcccCCHHHHH
Confidence 788899999999999999999999876321 11 11 1222222222 2222234456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhc
Q 000830 528 RIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELI 606 (1265)
Q Consensus 528 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 606 (1265)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999876 9999999999999999988876
Q ss_pred cC
Q 000830 607 SN 608 (1265)
Q Consensus 607 ~~ 608 (1265)
..
T Consensus 233 ~~ 234 (249)
T PRK14253 233 SN 234 (249)
T ss_pred cC
Confidence 54
No 425
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.9e-40 Score=382.01 Aligned_cols=217 Identities=27% Similarity=0.470 Sum_probs=181.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.|+++|++++|++ ..+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|+++.... ...++.|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 5999999999963 35999999999999999999999999999999999999999999999999987644 4678899
Q ss_pred eEEccCCcccc-ccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhcc
Q 000830 461 GLVNQEPALFA-TTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVK 537 (1265)
Q Consensus 461 ~~v~Q~~~lf~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~ 537 (1265)
|||||++.++. .|++||+.+... ..+..+..+.+ .++.++ ..+++..++. ..+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~--~~ll~~-~~L~~~~~~~----~~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVI--PSLLEF-ARLESKADAR----VSDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHH--HHHHHH-cCCchhhCCC----hhhCCHHHHHHHHHHHHHhc
Confidence 99999999875 499999985321 11222222211 112222 2345444444 45799999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 538 NPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 538 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999875 48999999999999976 999999999999999999998643
No 426
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.8e-40 Score=361.69 Aligned_cols=207 Identities=35% Similarity=0.564 Sum_probs=171.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999974 3589999999999999999999999999999999999999999999999998765443 46799
Q ss_pred EEccCCcccc-ccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 462 LVNQEPALFA-TTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 462 ~v~Q~~~lf~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
|++|++.+|. .|++||+.++... ...++..+. +.+.+..+ |++........+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~ 148 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDER-----VREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVRE 148 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999986 4999999875321 122221111 11122222 333445566678999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEee
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 600 (1265)
|+++||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 149 PKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999998875 38999999999999876 9999999999999875
No 427
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=367.92 Aligned_cols=218 Identities=31% Similarity=0.493 Sum_probs=183.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCCC--Ch
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKGL--DL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 453 (1265)
.|+++|++++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 3589999999999999999999999999999999999985 799999999998643 34
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCC--C-CH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDD--A-TM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
..+|+.++|++|++.+|+.|++||+.++... . +. +++.++++..+ +.+++.......+..||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAA-------LWDEVKDDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcC-------CchhhhhHhhCCcccCCHHHH
Confidence 5678889999999999999999999876321 1 11 12222233222 222223345567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++||||++.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999998
Q ss_pred ccC
Q 000830 606 ISN 608 (1265)
Q Consensus 606 ~~~ 608 (1265)
...
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 754
No 428
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.6e-40 Score=362.84 Aligned_cols=210 Identities=27% Similarity=0.486 Sum_probs=180.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++ .++++|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 5999999999963 3589999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEecCCCCCcccHHHHhccCC---CCC-CHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000830 1097 ALVQQEPALFATSIYENILYGK---DGA-SEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVL 1172 (1265)
Q Consensus 1097 ~~VpQdp~LF~gTIreNl~~g~---~~~-sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALl 1172 (1265)
+|+||++.+|+.|++||+.++. ... .++++.++++..++. ++.......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALP----------DTILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCC----------hHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999997631 111 122333444444332 12344556789999999999999999
Q ss_pred cCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhccCEEEEEe-CCEEEEecChh
Q 000830 1173 KNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKNADQISVIE-SGKIIEQGTHS 1239 (1265)
Q Consensus 1173 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~~DrI~vl~-~G~Ive~Gt~~ 1239 (1265)
++|+++||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999999998753 789999999999998899999994 66677889886
No 429
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-40 Score=368.79 Aligned_cols=223 Identities=34% Similarity=0.507 Sum_probs=186.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC--C---CCcEEEECCcccCC--CCH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD--P---TAGKVMVDGIDIKR--LNL 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--~~l 1089 (1265)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999973 358999999999999999999999999999999999975 4 58999999999864 345
Q ss_pred HHHhcccEEEecCCCCCcccHHHHhccCC--CCC-C----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHH
Q 000830 1090 KSLRKHIALVQQEPALFATSIYENILYGK--DGA-S----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQK 1162 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~LF~gTIreNl~~g~--~~~-s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQk 1162 (1265)
..+|++++|+||+|.+|..|+++|+.++. ... . ++++.++++.+++.+.+ .........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEV-------KDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccch-------hhHHhcCcccCCHHHH
Confidence 56788999999999999999999998642 111 1 23344455555543222 2233445568999999
Q ss_pred HHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000830 1163 QRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSL 1241 (1265)
Q Consensus 1163 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eL 1241 (1265)
||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999875 999999999999999999998
Q ss_pred hhcCCcHH
Q 000830 1242 VENEDGAY 1249 (1265)
Q Consensus 1242 l~~~~g~f 1249 (1265)
..++...+
T Consensus 235 ~~~~~~~~ 242 (252)
T PRK14255 235 FLNPKEKE 242 (252)
T ss_pred hcCCCChH
Confidence 86544433
No 430
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.7e-40 Score=378.78 Aligned_cols=213 Identities=31% Similarity=0.546 Sum_probs=182.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|+++
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 5999999999963 35899999999999999999999999999999999999999999999999997654 5688999
Q ss_pred EEEecCCCCC-cccHHHHhccCCC--CCCHHHHH----HHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPALF-ATSIYENILYGKD--GASEGEVI----EAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~LF-~gTIreNl~~g~~--~~sd~ei~----~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
+|+||++.+| ..|++||+.+... ..+..+.. ++++..+ +++..++.++ +||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~-------L~~~~~~~~~----~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFAR-------LESKADARVS----DLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchhhCCChh----hCCHHHHHHHHHHH
Confidence 9999999987 5699999975211 12222222 2222222 3444555554 69999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
||+.+|++|||||||++||+.+...+++.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999875 47899999999999976 999999999999999999999763
No 431
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=380.12 Aligned_cols=229 Identities=24% Similarity=0.378 Sum_probs=188.6
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC----CCCcEEEECCcccCCCCHHH
Q 000830 1017 TIELRGVHFSYPSRP-EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD----PTAGKVMVDGIDIKRLNLKS 1091 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~----p~~G~I~idG~di~~~~l~~ 1091 (1265)
.|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||+++.+++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 379999999996422 2468999999999999999999999999999999999986 58999999999999888765
Q ss_pred Hh----cccEEEecCCCC--C-cccHHHHhccC---C---C----C--CCHHHHHHHHHHhchHHHHHhCCCCccccccC
Q 000830 1092 LR----KHIALVQQEPAL--F-ATSIYENILYG---K---D----G--ASEGEVIEAAKLANAHSFISALPEGYSTKVGE 1152 (1265)
Q Consensus 1092 lR----~~i~~VpQdp~L--F-~gTIreNl~~g---~---~----~--~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge 1152 (1265)
++ ++|+||||+|.. + ..|+.+|+... . . . ...+++.++++.+++.+.-+ ....
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~~~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD--------AMRS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH--------HHhC
Confidence 53 479999999973 3 35899988531 1 0 0 01235566677776643211 1123
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeC
Q 000830 1153 RGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIES 1229 (1265)
Q Consensus 1153 ~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~ 1229 (1265)
....||||||||++|||||+.+|+||||||||++||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||||+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 3457999999999999999999999999999999999999999999999764 7899999999999976 999999999
Q ss_pred CEEEEecChhhhhhcCCcHHHHHH
Q 000830 1230 GKIIEQGTHSSLVENEDGAYFKLI 1253 (1265)
Q Consensus 1230 G~Ive~Gt~~eLl~~~~g~f~~l~ 1253 (1265)
|+|+|.|+++++.+++...|.+.+
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~~l 258 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQAL 258 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHHHH
Confidence 999999999999886666776643
No 432
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=3.3e-40 Score=346.54 Aligned_cols=172 Identities=40% Similarity=0.677 Sum_probs=161.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999742 245899999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000830 462 LVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSI 541 (1265)
Q Consensus 462 ~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 541 (1265)
|++|++.+|+.|++||+ ||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhccCEEEEEeCCEE
Q 000830 542 LLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRNADVIAVVQGRKI 596 (1265)
Q Consensus 542 lllDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~i 596 (1265)
|||||||++||+.+...+.+.|+++. +++|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998875 48999999999999988999999999974
No 433
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=368.31 Aligned_cols=219 Identities=29% Similarity=0.521 Sum_probs=182.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCCC--Ch
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKGL--DL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 453 (1265)
.|+++|++|+|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 3589999999999999999999999999999999999984 899999999988653 33
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCC---CCHHH----HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDD---ATMEE----ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~---~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
..+++.++|++|++.+|+.|++||+.++... ...++ +.++++..++. +..+......+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALW-------DEVKSELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCC-------chhHHHHhCChhhcCHHHH
Confidence 4668889999999999999999999875311 11111 22223222221 1122345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998765 999999999999999999988
Q ss_pred ccCC
Q 000830 606 ISNP 609 (1265)
Q Consensus 606 ~~~~ 609 (1265)
.+.+
T Consensus 233 ~~~~ 236 (250)
T PRK14262 233 VERP 236 (250)
T ss_pred HhCC
Confidence 7643
No 434
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.3e-40 Score=361.17 Aligned_cols=201 Identities=32% Similarity=0.514 Sum_probs=168.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChH---HHhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLK---WLRQ 458 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~ 458 (1265)
++++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++..++.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 689999999952 24599999999999999999999999999999999999999999999999999876543 4678
Q ss_pred heeEEccCCcccc-ccHHHHhccCCCC--CCH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 459 QIGLVNQEPALFA-TTIRENILYGKDD--ATM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~-~ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
.++|++|++.+|. .|++||+.++... ... +++.++++..++. ........+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLE-----------HKADAFPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-----------hhhhCChhhCCHHHHHHHHH
Confidence 8999999999996 5999999875211 111 2222333332222 22334456899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCE
Q 000830 532 SRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRK 595 (1265)
Q Consensus 532 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~ 595 (1265)
||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999998875 48999999999999976 99999999985
No 435
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.3e-40 Score=365.23 Aligned_cols=213 Identities=34% Similarity=0.529 Sum_probs=173.7
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh---HHHh
Q 000830 382 IEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL---KWLR 457 (1265)
Q Consensus 382 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r 457 (1265)
|+++||+|+|++.. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999996431 1258999999999999999999999999999999999999999999999999987764 5678
Q ss_pred hheeEEccCC--ccc-cccHHHHhccCCCC---CCHHHHHHHHHHhcHHHHHhcCccccc-ccccCCCCCCChHHHHHHH
Q 000830 458 QQIGLVNQEP--ALF-ATTIRENILYGKDD---ATMEEITRAAKLSEAMSFISNLPERFE-TQVGERGIQLSGGQKQRIA 530 (1265)
Q Consensus 458 ~~i~~v~Q~~--~lf-~~ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqkqria 530 (1265)
++++|++|++ .++ ..|++||+.++... ...++..+.+ +.+.+..+ |+. ......+.+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHHH
Confidence 8999999999 344 46999999764211 1111111110 01223333 232 3456677899999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEee
Q 000830 531 ISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 531 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 600 (1265)
|||||+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998753 8999999999999874 9999999999998764
No 436
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5.5e-40 Score=358.99 Aligned_cols=210 Identities=30% Similarity=0.450 Sum_probs=183.6
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh----HHHhh
Q 000830 383 EFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL----KWLRQ 458 (1265)
Q Consensus 383 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~----~~~r~ 458 (1265)
.+.|+.|+|+.+ .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 469999999999999999999999999999999999999999999999998866542 23567
Q ss_pred heeEEccCCccccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 459 QIGLVNQEPALFATTIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
.++|++|++.+|+.|++||+.++.+. ..++..++++..++.+.+..+|.|+++..+....+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPF-NKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcC-CHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 89999999999988999999987542 34455666777777777888899999999999999999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHH--HHHHHc-CCCeEEEEccCchhhhccCEEEEEeCCE
Q 000830 539 PSILLLDEATSALDAESENSVQE--ALDRVM-VGRTTVVVAHRLSTIRNADVIAVVQGRK 595 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~--~l~~~~-~~~t~i~itH~l~~~~~~d~i~~l~~G~ 595 (1265)
|++|||||||++||+.+...+.+ .++.+. .++|+|++||+++.+..||++++|++|.
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988887 455443 3799999999999998899999999884
No 437
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-40 Score=367.27 Aligned_cols=212 Identities=28% Similarity=0.447 Sum_probs=180.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999974 35999999999999999999999999999999999999999999999999998877777888999
Q ss_pred EEccCCcc-ccccHHHHhccCCCCC--CH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 462 LVNQEPAL-FATTIRENILYGKDDA--TM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 462 ~v~Q~~~l-f~~ti~~ni~~~~~~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
|++|++.+ +..|++||+.++.... .. +.+.++++.. |++........+||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQV-----------DLAHLAGRDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHc-----------CCHhHhcCCcccCCHHHHHHHHHHHH
Confidence 99999987 5669999998864211 11 1122222222 23333455667899999999999999
Q ss_pred hc------cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 535 IV------KNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 535 l~------~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
|+ .+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999875 48999999999999875 999999999999999999887
Q ss_pred cc
Q 000830 606 IS 607 (1265)
Q Consensus 606 ~~ 607 (1265)
..
T Consensus 229 ~~ 230 (258)
T PRK13548 229 LT 230 (258)
T ss_pred hC
Confidence 64
No 438
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-40 Score=369.19 Aligned_cols=223 Identities=25% Similarity=0.449 Sum_probs=184.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH-hhh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL-RQQ 459 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~ 459 (1265)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 459999999999999999999999999999999999999999999999999987776554 456
Q ss_pred eeEEccCCccccc-cHHHHhccCCCCCCH----------HHH--HHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 460 IGLVNQEPALFAT-TIRENILYGKDDATM----------EEI--TRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 460 i~~v~Q~~~lf~~-ti~~ni~~~~~~~~~----------~~~--~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
++|++|++.+|+. |++||+.++...... ... ........+.+.++.+ |++......+.+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 9999999999986 999999986321000 000 0000111122334443 455566778889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcc
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHE 603 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 603 (1265)
||++|||||+.+|++|||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 999999999999999999999999999999999999988753 7899999999999866 9999999999999999988
Q ss_pred hhccC
Q 000830 604 ELISN 608 (1265)
Q Consensus 604 ~l~~~ 608 (1265)
++...
T Consensus 240 ~~~~~ 244 (255)
T PRK11300 240 EIRNN 244 (255)
T ss_pred HHhhC
Confidence 87643
No 439
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-40 Score=372.02 Aligned_cols=217 Identities=28% Similarity=0.434 Sum_probs=178.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCC--CCChHHHhhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIK--GLDLKWLRQQ 459 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~r~~ 459 (1265)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++. ..+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 689999999963 35999999999999999999999999999999999999999999999999985 3344567889
Q ss_pred eeEEccCCc--cccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHh
Q 000830 460 IGLVNQEPA--LFATTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAI 535 (1265)
Q Consensus 460 i~~v~Q~~~--lf~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal 535 (1265)
|+||+|++. ++..|+.+|+.++.. ....++..+. +.+.+..+ |++........+||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL 151 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRR-----VDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGAL 151 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHH
Confidence 999999985 567799999987521 1122222111 11112211 122223445678999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 536 VKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 536 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++++.|+++++...
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999998875 48999999999999865 999999999999999999887654
No 440
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-40 Score=359.60 Aligned_cols=201 Identities=25% Similarity=0.491 Sum_probs=170.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. .+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 578999999963 458999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEecCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFAT-SIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||++.+|.+ |++||+.++.. ..+ ++++.++++..+ ++........+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLE-----------LSEYANKRVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcC-----------ChHHHhCcHhhCCHHHHHHHHHHHH
Confidence 99999999975 99999976421 111 123334444443 3333444556899999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~G 1236 (1265)
++.+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999999999999875 47899999999999876 9999999999998865
No 441
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-40 Score=368.32 Aligned_cols=227 Identities=30% Similarity=0.499 Sum_probs=182.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCC-----cceEEECCeeCCC--CCh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPL-----SGEILLDGNNIKG--LDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~~ 453 (1265)
.++++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 4789999999963 45999999999999999999999999999999999999874 8999999999864 344
Q ss_pred HHHhhheeEEccCCccccc-cHHHHhccCCCC--C-CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHH
Q 000830 454 KWLRQQIGLVNQEPALFAT-TIRENILYGKDD--A-TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRI 529 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~-ti~~ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 529 (1265)
..+|+.++|++|++.+|+. |+.||+.++... . ..++..+.+... ...+ .+..+........+.+||||||||+
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~--l~~~-~l~~~l~~~~~~~~~~LS~G~~qrv 157 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERS--LRGA-ALWDEVKDRLKTPATGLSGGQQQRL 157 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHH--HHHc-CcchhhhhhhcCCcccCCHHHHHHH
Confidence 5678889999999999985 999999865321 1 222222221110 0101 1111111223445678999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 530 AISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 530 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
+|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 158 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 237 (252)
T PRK14272 158 CIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLFTN 237 (252)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988778999999999999886 999999999999999999998765
Q ss_pred CchHH
Q 000830 609 PNSAY 613 (1265)
Q Consensus 609 ~~~~~ 613 (1265)
+...+
T Consensus 238 ~~~~~ 242 (252)
T PRK14272 238 PRDER 242 (252)
T ss_pred cCcHH
Confidence 43333
No 442
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-40 Score=382.77 Aligned_cols=212 Identities=29% Similarity=0.465 Sum_probs=184.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCC----CHHHHh
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRL----NLKSLR 1093 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~l~~lR 1093 (1265)
|++ |++++|.+ .. + |+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +....|
T Consensus 2 l~~-~l~k~~~~---~~-~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---LC-L-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---EE-E-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999963 22 3 99999999999999999999999999999999999999999999998653 244568
Q ss_pred cccEEEecCCCCCc-ccHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000830 1094 KHIALVQQEPALFA-TSIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVL 1172 (1265)
Q Consensus 1094 ~~i~~VpQdp~LF~-gTIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALl 1172 (1265)
++++||||++.+|. .|++||+.++.....++++.++++..++.++.+.. ..+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRY-----------PGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCC-----------cccCCHHHHHHHHHHHHHH
Confidence 89999999999996 59999999875444456677777777765554443 3579999999999999999
Q ss_pred cCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCC
Q 000830 1173 KNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENED 1246 (1265)
Q Consensus 1173 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~ 1246 (1265)
++|++||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 99999999999999999999999999998764 6899999999998876 99999999999999999999988654
No 443
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-40 Score=360.37 Aligned_cols=205 Identities=37% Similarity=0.632 Sum_probs=170.3
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeE
Q 000830 383 EFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGL 462 (1265)
Q Consensus 383 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 462 (1265)
+++|++++|++. +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++|+|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999742 2459999999999999999999999999999999999999999999999999987777788899999
Q ss_pred EccCCc--cccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 463 VNQEPA--LFATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 463 v~Q~~~--lf~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
++|++. +++.|++||+.++... ....+..+ .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999984 5678999999875321 12211111 111222222 233344566788999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCE
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRK 595 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~ 595 (1265)
|++|||||||++||+.++..+.+.|.++. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999998875 48999999999999987 99999999985
No 444
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.9e-40 Score=376.37 Aligned_cols=215 Identities=22% Similarity=0.417 Sum_probs=183.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
++++|++++|++ ..+|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. +...+|+++|
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 459999999999999999999999999999999999999999999999999876 4457788999
Q ss_pred EEccCCccccc-cHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 462 LVNQEPALFAT-TIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
|+||++.+|+. |+.||+.+.... ...++..+. +.+.+..+ |++........+||||||||++|||||+.+
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQR-----VEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 999999763211 111221111 11223333 344455666788999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
|++|||||||++||+.+.+.+++.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 9999999999999999999999999998778999999999999876 99999999999999999998854
No 445
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-40 Score=372.57 Aligned_cols=221 Identities=29% Similarity=0.496 Sum_probs=182.6
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCCC--C
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKGL--D 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~ 452 (1265)
..|+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||+++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 35899999999963 358999999999999999999999999999999999864 4999999999988643 3
Q ss_pred hHHHhhheeEEccCCccccccHHHHhccCCCC--C-CHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 453 LKWLRQQIGLVNQEPALFATTIRENILYGKDD--A-TME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
...+|++++||+|++.+|+.|++||+.++... . ... ++.++++..++ .++........+..|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAAL-------WDEVSDRLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCC-------ccchhhHhhCChhhCCHHH
Confidence 34578899999999999988999999976321 1 111 12222222221 1111223456678899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcch
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEE 604 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 604 (1265)
|||++|||||+.+|++|||||||++||+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988777899999999999865 99999999999999999999
Q ss_pred hccCCc
Q 000830 605 LISNPN 610 (1265)
Q Consensus 605 l~~~~~ 610 (1265)
+.+++.
T Consensus 268 ~~~~~~ 273 (286)
T PRK14275 268 LFTNPK 273 (286)
T ss_pred HHhCCC
Confidence 876543
No 446
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-40 Score=375.27 Aligned_cols=220 Identities=31% Similarity=0.497 Sum_probs=187.7
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCcEEEECCcccCCC--C
Q 000830 1016 GTIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD-----PTAGKVMVDGIDIKRL--N 1088 (1265)
Q Consensus 1016 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~~--~ 1088 (1265)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46999999999974 358999999999999999999999999999999999986 6899999999998753 4
Q ss_pred HHHHhcccEEEecCCCCCcccHHHHhccCCCC-------------------CCHHHHHHHHHHhchHHHHHhCCCCcccc
Q 000830 1089 LKSLRKHIALVQQEPALFATSIYENILYGKDG-------------------ASEGEVIEAAKLANAHSFISALPEGYSTK 1149 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~gTIreNl~~g~~~-------------------~sd~ei~~al~~a~l~~~i~~lp~Gldt~ 1149 (1265)
...+|++++|+||++.+|.+|++||+.++... ..++++.++++..++. .++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALW-------DEVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCc-------hhhhHH
Confidence 56788999999999999999999999865211 0123344555554443 233445
Q ss_pred ccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcCCceEEEEecCchhhhc-cCEE-EEE
Q 000830 1150 VGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMRKRTTIIVAHRLSTIKN-ADQI-SVI 1227 (1265)
Q Consensus 1150 vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHRl~ti~~-~DrI-~vl 1227 (1265)
......+||||||||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 56677889999999999999999999999999999999999999999999998877899999999999876 9997 567
Q ss_pred eCCEEEEecChhhhhhcC
Q 000830 1228 ESGKIIEQGTHSSLVENE 1245 (1265)
Q Consensus 1228 ~~G~Ive~Gt~~eLl~~~ 1245 (1265)
++|++++.|+++++.+..
T Consensus 274 ~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 274 TGGELVEYDDTDKIFENP 291 (305)
T ss_pred cCCEEEEeCCHHHHHhCc
Confidence 999999999999997643
No 447
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-40 Score=368.87 Aligned_cols=220 Identities=33% Similarity=0.507 Sum_probs=183.9
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCC--CC
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKG--LD 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 452 (1265)
+.++++|++++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 36899999999963 3589999999999999999999999999999999999985 48999999998854 34
Q ss_pred hHHHhhheeEEccCCccccccHHHHhccCCCC---CCH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 453 LKWLRQQIGLVNQEPALFATTIRENILYGKDD---ATM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
...++++++||+|++.+|+.|++||+.++... ... +.+.++++..++.+++ .......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-------KDKLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHH
Confidence 56778899999999999999999999875311 111 1223333333332222 223456678899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEe-----CCEEEEe
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQ-----GRKIVKT 599 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~-----~G~i~~~ 599 (1265)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999988778999999999999876 99999998 5999999
Q ss_pred eCcchhccCC
Q 000830 600 GSHEELISNP 609 (1265)
Q Consensus 600 g~~~~l~~~~ 609 (1265)
|+++++.+.+
T Consensus 236 ~~~~~~~~~~ 245 (259)
T PRK14260 236 GVTTQIFSNP 245 (259)
T ss_pred CCHHHHhcCC
Confidence 9999987543
No 448
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=9.4e-40 Score=367.25 Aligned_cols=227 Identities=26% Similarity=0.428 Sum_probs=188.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC---CcEEEECCcccCCC-----C
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPT---AGKVMVDGIDIKRL-----N 1088 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~idG~di~~~-----~ 1088 (1265)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 45899999999999999999999999999999999999986 49999999998653 3
Q ss_pred HHHHhcccEEEecCCCCCc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhchHHHHHhCCCCccccccCC
Q 000830 1089 LKSLRKHIALVQQEPALFA-TSIYENILYGKDG--------------ASEGEVIEAAKLANAHSFISALPEGYSTKVGER 1153 (1265)
Q Consensus 1089 l~~lR~~i~~VpQdp~LF~-gTIreNl~~g~~~--------------~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~ 1153 (1265)
...+|++++|+||++.+|. .|+++|+.++... ...+++.++++..++.+.. ...
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFA-----------HQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHH-----------hCC
Confidence 4567889999999999887 5999999865311 0122345555555554333 334
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCC
Q 000830 1154 GVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESG 1230 (1265)
Q Consensus 1154 G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G 1230 (1265)
..+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 457999999999999999999999999999999999999999999999763 7899999999998755 9999999999
Q ss_pred EEEEecChhhhhhcCCcHHHHHHHHhhccC
Q 000830 1231 KIIEQGTHSSLVENEDGAYFKLINLQQRQD 1260 (1265)
Q Consensus 1231 ~Ive~Gt~~eLl~~~~g~f~~l~~~~~~~~ 1260 (1265)
++++.|+++++ . .....+++.......
T Consensus 230 ~i~~~g~~~~~-~--~~~~~~~~~~~~~~~ 256 (262)
T PRK09984 230 HVFYDGSSQQF-D--NERFDHLYRSINRVE 256 (262)
T ss_pred EEEEeCCHHHh-c--cHHHHHHHhhhhccc
Confidence 99999999997 3 345677776655443
No 449
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.8e-40 Score=360.34 Aligned_cols=201 Identities=35% Similarity=0.581 Sum_probs=170.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCC--CCHHHHhcc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKR--LNLKSLRKH 1095 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--~~l~~lR~~ 1095 (1265)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999964 358999999999999999999999999999999999999999999999999853 455678899
Q ss_pred cEEEecCCCCCc-ccHHHHhccCCC---CCCHH----HHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1096 IALVQQEPALFA-TSIYENILYGKD---GASEG----EVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1096 i~~VpQdp~LF~-gTIreNl~~g~~---~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
++|+||+|.+|. .|++||+.++.. ..+.+ ++.++++..++ +..+.....+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGL-----------ADKADAYPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCC-----------HhHhhhCccccCHHHHHHHHH
Confidence 999999999986 699999976421 22222 23333444333 333344446899999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhc-cCEEEEEeCCEE
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR-KRTTIIVAHRLSTIKN-ADQISVIESGKI 1232 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHRl~ti~~-~DrI~vl~~G~I 1232 (1265)
|||++++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999999998754 7899999999999976 999999999975
No 450
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.6e-40 Score=359.84 Aligned_cols=206 Identities=33% Similarity=0.516 Sum_probs=169.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh---HHHhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL---KWLRQ 458 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~ 458 (1265)
++++|++++|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999642 358999999999999999999999999999999999999999999999999887654 34678
Q ss_pred heeEEccCCccccc-cHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHh
Q 000830 459 QIGLVNQEPALFAT-TIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAI 535 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal 535 (1265)
.++||+|++.+|+. |++||+.++... ...++..+.+ .+.+..+ |++........+||||||||++|||||
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 151 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRV-----PAALELV--GLSHKHRALPAELSGGEQQRVAIARAI 151 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHH
Confidence 89999999999985 999999875321 1222211111 1122222 233334445578999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEE
Q 000830 536 VKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKI 596 (1265)
Q Consensus 536 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i 596 (1265)
+.+|+++||||||++||+++...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 152 VNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999874 58999999999999976 999999999974
No 451
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=4e-39 Score=406.94 Aligned_cols=104 Identities=34% Similarity=0.557 Sum_probs=94.4
Q ss_pred Cccc-cccCCCCCCChhHHHHHHHHHHhccCC---CEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhh
Q 000830 1145 GYST-KVGERGVQLSGGQKQRVAIARAVLKNP---EILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIK 1219 (1265)
Q Consensus 1145 Gldt-~vge~G~~LSgGQkQrlaLARALlr~p---~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~ 1219 (1265)
|++. .++.....||||||||++|||||+++| +++||||||++||+.+.+.+.+.|+++. ++.|||+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 6654 467778899999999999999999999 9999999999999999999999999875 4789999999999999
Q ss_pred ccCEEEEE------eCCEEEEecChhhhhhcCCcH
Q 000830 1220 NADQISVI------ESGKIIEQGTHSSLVENEDGA 1248 (1265)
Q Consensus 1220 ~~DrI~vl------~~G~Ive~Gt~~eLl~~~~g~ 1248 (1265)
.||+|++| ++|+|++.|+++++.+++.+.
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~s~ 932 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEASY 932 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcccH
Confidence 99999999 799999999999999755443
No 452
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-40 Score=369.91 Aligned_cols=219 Identities=31% Similarity=0.557 Sum_probs=182.2
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCC--CC
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKG--LD 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 452 (1265)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 45999999999963 359999999999999999999999999999999999997 689999999999864 34
Q ss_pred hHHHhhheeEEccCCccccccHHHHhccCCCC--CC---HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHH
Q 000830 453 LKWLRQQIGLVNQEPALFATTIRENILYGKDD--AT---MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQ 527 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~--~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 527 (1265)
...++++++||+|++.+|+.|++||+.++... .. .+++.++++..+ +..........++.+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~i~~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAA-------LWDEVKDQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcC-------CCchhHHHHhCCcccCCHHHHH
Confidence 56678899999999999988999999875311 11 122233333222 2111122356677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEE-EEeCCEEEEeeCcchh
Q 000830 528 RIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIA-VVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 528 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~-~l~~G~i~~~g~~~~l 605 (1265)
|++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998767899999999999876 99975 5799999999999888
Q ss_pred ccC
Q 000830 606 ISN 608 (1265)
Q Consensus 606 ~~~ 608 (1265)
..+
T Consensus 268 ~~~ 270 (285)
T PRK14254 268 FEN 270 (285)
T ss_pred HhC
Confidence 654
No 453
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-40 Score=369.03 Aligned_cols=214 Identities=27% Similarity=0.445 Sum_probs=183.0
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQ 459 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 459 (1265)
..|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 46999999999973 359999999999999999999999999999999999999999999999999988888888889
Q ss_pred eeEEccCCcccc-ccHHHHhccCC-CC------CCH---HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHH
Q 000830 460 IGLVNQEPALFA-TTIRENILYGK-DD------ATM---EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQR 528 (1265)
Q Consensus 460 i~~v~Q~~~lf~-~ti~~ni~~~~-~~------~~~---~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 528 (1265)
++||+|++.+|. .|++||+.++. +. ... +++.++++..+ ++......+.+||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATG-----------ITHLADQSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcC-----------CHHHhcCCcccCChHHHHH
Confidence 999999998876 59999998753 11 011 12222333322 3333455677899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 529 IAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 529 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
++||||++++|++|||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999988753 7899999999998865 999999999999999998887
Q ss_pred cc
Q 000830 606 IS 607 (1265)
Q Consensus 606 ~~ 607 (1265)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 64
No 454
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-40 Score=378.99 Aligned_cols=229 Identities=21% Similarity=0.371 Sum_probs=183.5
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC----CCcceEEECCeeCCCCChHH
Q 000830 381 HIEFKDVSFCYPSR-PDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE----PLSGEILLDGNNIKGLDLKW 455 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~~~g~~~~~~~~~~ 455 (1265)
-|+++|++++|+.. ....+++|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++...+.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 37899999999632 23469999999999999999999999999999999999986 58999999999998887765
Q ss_pred Hh----hheeEEccCCc--ccc-ccHHHHhccCCC---C-----CCHHHHHHHHHHhcHHHHHhc--CcccccccccCCC
Q 000830 456 LR----QQIGLVNQEPA--LFA-TTIRENILYGKD---D-----ATMEEITRAAKLSEAMSFISN--LPERFETQVGERG 518 (1265)
Q Consensus 456 ~r----~~i~~v~Q~~~--lf~-~ti~~ni~~~~~---~-----~~~~~~~~~~~~~~~~~~i~~--l~~g~~t~~~~~g 518 (1265)
++ +.|+||+|+|. +++ .||.+|+..... . ....+.. ..+.+.+.. |++ ........+
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~L~~~gL~~-~~~~~~~~p 156 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRK-----RRAIELLHRVGIKD-HKDAMRSFP 156 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHH-----HHHHHHHHHCCCCC-hHHHHhCCc
Confidence 43 47999999996 343 489999864210 0 0101111 111222222 221 112245667
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCE
Q 000830 519 IQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRK 595 (1265)
Q Consensus 519 ~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~ 595 (1265)
.+||||||||++|||||+.+|++||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|+
T Consensus 157 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ 236 (330)
T PRK15093 157 YELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQ 236 (330)
T ss_pred hhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 79999999999999999999999999999999999999999999998753 8999999999999976 99999999999
Q ss_pred EEEeeCcchhccCCchHHHH
Q 000830 596 IVKTGSHEELISNPNSAYAA 615 (1265)
Q Consensus 596 i~~~g~~~~l~~~~~~~~~~ 615 (1265)
|++.|+.+++..++...|.+
T Consensus 237 ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 237 TVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEEECCHHHHHhCCCCHHHH
Confidence 99999999998776666755
No 455
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-40 Score=367.04 Aligned_cols=212 Identities=28% Similarity=0.446 Sum_probs=183.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC--------CcEEEECCcccCCCCH
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPT--------AGKVMVDGIDIKRLNL 1089 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~--------~G~I~idG~di~~~~l 1089 (1265)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999963 35899999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhcccEEEecCCC-CCcccHHHHhccCCC-C------CC---HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCC
Q 000830 1090 KSLRKHIALVQQEPA-LFATSIYENILYGKD-G------AS---EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLS 1158 (1265)
Q Consensus 1090 ~~lR~~i~~VpQdp~-LF~gTIreNl~~g~~-~------~s---d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LS 1158 (1265)
..+|+.++|+||++. +|..|++||+.++.. . .+ ++.++++++..+ +++.++.....||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAG-----------ATALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcC-----------cHhhhcCCcccCC
Confidence 888889999999986 578899999977521 1 11 122344444444 4444555667899
Q ss_pred hhHHHHHHHHHHhc---------cCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEE
Q 000830 1159 GGQKQRVAIARAVL---------KNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISV 1226 (1265)
Q Consensus 1159 gGQkQrlaLARALl---------r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~v 1226 (1265)
||||||++|||||+ .+|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||++++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998754 6899999999999975 999999
Q ss_pred EeCCEEEEecChhhhhh
Q 000830 1227 IESGKIIEQGTHSSLVE 1243 (1265)
Q Consensus 1227 l~~G~Ive~Gt~~eLl~ 1243 (1265)
|++|++++.|+++++++
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999999875
No 456
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.9e-40 Score=383.80 Aligned_cols=234 Identities=33% Similarity=0.534 Sum_probs=190.7
Q ss_pred ccEEEEeEEEECCCC--------CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCee--CC
Q 000830 380 GHIEFKDVSFCYPSR--------PDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNN--IK 449 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~--------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~--~~ 449 (1265)
.-++++|+++.|..+ ....+++||||++++||++||||+||||||||.++|+|+.+|++|+|.++|.+ +.
T Consensus 279 ~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~ 358 (539)
T COG1123 279 PLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLT 358 (539)
T ss_pred ceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccc
Confidence 457899999999742 23568999999999999999999999999999999999999999999999987 23
Q ss_pred CCChHHHhhheeEEccCCc--ccc-ccHHHHhccCCCCCCH-HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 450 GLDLKWLRQQIGLVNQEPA--LFA-TTIRENILYGKDDATM-EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 450 ~~~~~~~r~~i~~v~Q~~~--lf~-~ti~~ni~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
.-+....|+++-+|+|||+ |-+ .||.++|.-....... ..-....+.+.+.+.+ .||.. ....++.+|||||
T Consensus 359 ~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~V-gL~~~---~l~ryP~elSGGQ 434 (539)
T COG1123 359 GGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELV-GLPPE---FLDRYPHELSGGQ 434 (539)
T ss_pred cchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHc-CCCHH---HHhcCchhcCcch
Confidence 2234567889999999996 444 4999999743211100 0111112333333333 34422 4677888999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCc
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSH 602 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 602 (1265)
||||||||||+.+|+++|+|||||+||+-+...|.+.|+++.+ |.|.|+|||+++.++. ||||+||++|+|||.|+.
T Consensus 435 rQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~ 514 (539)
T COG1123 435 RQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPT 514 (539)
T ss_pred hHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCH
Confidence 9999999999999999999999999999999999999998864 8999999999999988 999999999999999999
Q ss_pred chhccCCchHHHHHH
Q 000830 603 EELISNPNSAYAALV 617 (1265)
Q Consensus 603 ~~l~~~~~~~~~~~~ 617 (1265)
+++.+.+...|.+..
T Consensus 515 ~~v~~~p~h~Ytr~L 529 (539)
T COG1123 515 EKVFENPQHPYTRKL 529 (539)
T ss_pred HHHhcCCCChHHHHH
Confidence 999998888887654
No 457
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.1e-39 Score=364.79 Aligned_cols=228 Identities=25% Similarity=0.393 Sum_probs=186.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC----CCcEEEECCcccCCCCHHHH
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDP----TAGKVMVDGIDIKRLNLKSL 1092 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p----~~G~I~idG~di~~~~l~~l 1092 (1265)
.|+++||+++| + .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 58999999999 2 2589999999999999999999999999999999999999 999999999998632 223
Q ss_pred hcccEEEecCCC-CCc--ccHHHHhccC----CCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000830 1093 RKHIALVQQEPA-LFA--TSIYENILYG----KDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRV 1165 (1265)
Q Consensus 1093 R~~i~~VpQdp~-LF~--gTIreNl~~g----~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrl 1165 (1265)
++.++||||+|. .|. .|+.+|+... .....+++++++++..++.++ ++.++.....||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 467999999985 443 4888886431 112234566777776665432 1234455678999999999
Q ss_pred HHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000830 1166 AIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLV 1242 (1265)
Q Consensus 1166 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl 1242 (1265)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999875 9999999999999999999998
Q ss_pred hcCCc-HHHHHHHHhhc
Q 000830 1243 ENEDG-AYFKLINLQQR 1258 (1265)
Q Consensus 1243 ~~~~g-~f~~l~~~~~~ 1258 (1265)
++... .++.++..+..
T Consensus 230 ~~~~~~~~~~~~~~~~~ 246 (254)
T PRK10418 230 NAPKHAVTRSLVSAHLA 246 (254)
T ss_pred hCCCCHHHHHHHHhhhh
Confidence 75444 44556655443
No 458
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-40 Score=338.03 Aligned_cols=220 Identities=29% Similarity=0.497 Sum_probs=187.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHH-Hhcc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKS-LRKH 1095 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~ 1095 (1265)
.++++||+..|.. ..+|++|||++++||+++++||||+||||++++++|+.+|.+|+|.++|.||...+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 4789999999963 46999999999999999999999999999999999999999999999999999998887 5889
Q ss_pred cEEEecCCCCCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000830 1096 IALVQQEPALFAT-SIYENILYGKDGASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKN 1174 (1265)
Q Consensus 1096 i~~VpQdp~LF~g-TIreNl~~g~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~ 1174 (1265)
|+||||...+|.. ||+|||.+|.-...+++-++ ...++..+-+| -|.......+.+|||||+|.+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----RDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccccc----ccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999965 99999998732222111111 00122223344 244455667789999999999999999999
Q ss_pred CCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1175 PEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1175 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
|++|+|||||.+|-|.--+.|.++|+++.+ +-||+.|-++.....+ +||.+||++|+|+.+|+.+||.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999885 4599999999999775 999999999999999999999974
No 459
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-40 Score=370.45 Aligned_cols=218 Identities=31% Similarity=0.536 Sum_probs=179.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCC--CChHHHhhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKG--LDLKWLRQQ 459 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--~~~~~~r~~ 459 (1265)
|+++|++++|++ ..++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...+++.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 689999999963 2358999999999999999999999999999999999999999999999999852 234567889
Q ss_pred eeEEccCC--ccccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHh
Q 000830 460 IGLVNQEP--ALFATTIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAI 535 (1265)
Q Consensus 460 i~~v~Q~~--~lf~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal 535 (1265)
|+|++|++ .+|+.|+.||+.++... .+.++..+. .. +.+..+ |++......+.+||||||||++|||||
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~--~~---~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~laral 152 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKR--VK---EALKAV--GMEGFENKPPHHLSGGQKKRVAIAGIL 152 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH--HH---HHHHHC--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999997 57888999999876321 122222111 11 112221 222223345678999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 536 VKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 536 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
+.+|++|||||||++||+.+...+.+.|.++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 153 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 153 AMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999875 48999999999999875 999999999999999999988754
No 460
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.7e-40 Score=360.22 Aligned_cols=198 Identities=28% Similarity=0.516 Sum_probs=164.2
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeE
Q 000830 383 EFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGL 462 (1265)
Q Consensus 383 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 462 (1265)
+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 35899999999999999999999999999999999999999999999998764 46778999
Q ss_pred EccCCcc---ccccHHHHhccCCCCC-------CH---HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHH
Q 000830 463 VNQEPAL---FATTIRENILYGKDDA-------TM---EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRI 529 (1265)
Q Consensus 463 v~Q~~~l---f~~ti~~ni~~~~~~~-------~~---~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqri 529 (1265)
|+|++.+ ++.|++||+.++.... .. +++.++++..+ ++........+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVG-----------LSELADRQIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcC-----------CHHHHhCCcccCCHHHHHHH
Confidence 9999976 5679999998764311 11 11222222222 22233445678999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEee
Q 000830 530 AISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 530 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 600 (1265)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999998875 58999999999999876 9999999886 55544
No 461
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=367.42 Aligned_cols=220 Identities=28% Similarity=0.474 Sum_probs=185.3
Q ss_pred cccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCC----
Q 000830 379 SGHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIK---- 449 (1265)
Q Consensus 379 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~---- 449 (1265)
.+.|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++.
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 467999999999973 3599999999999999999999999999999999999975 7999999998774
Q ss_pred CCChHHHhhheeEEccCCccccccHHHHhccCCC--CCC-----HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCC
Q 000830 450 GLDLKWLRQQIGLVNQEPALFATTIRENILYGKD--DAT-----MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLS 522 (1265)
Q Consensus 450 ~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~--~~~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 522 (1265)
..+...+++.++|++|++.+|++|++||+.++.. ... .+++.++++.+++ .+++.+..+....+||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAAL-------WDEVKDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCC-------chhhhHHHhCCcccCC
Confidence 2344567889999999999999999999987531 111 1223333333322 2233445667788999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeC
Q 000830 523 GGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 523 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 601 (1265)
||||||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999988778999999999999865 99999999999999999
Q ss_pred cchhccC
Q 000830 602 HEELISN 608 (1265)
Q Consensus 602 ~~~l~~~ 608 (1265)
++++...
T Consensus 244 ~~~~~~~ 250 (265)
T PRK14252 244 TDTIFIK 250 (265)
T ss_pred HHHHHhC
Confidence 9988754
No 462
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=9.1e-40 Score=355.77 Aligned_cols=202 Identities=36% Similarity=0.585 Sum_probs=176.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
++++||+++|+. .++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+ .+|+.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999962 468999999999999999999999999999999999999999999999987643 4678899
Q ss_pred EEecCCCCCcc-cHHHHhccCC-CC-----CCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFAT-SIYENILYGK-DG-----ASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~-~~-----~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||+|.+|.+ |++||+.++. +. ..++++.++++..++.+...+.| .+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 9999997542 11 12345667777777776655544 3799999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGT 1237 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt 1237 (1265)
++++|+++||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998753 7899999999999875 99999999999999874
No 463
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-40 Score=380.68 Aligned_cols=212 Identities=29% Similarity=0.465 Sum_probs=179.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCC----ChHHHh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGL----DLKWLR 457 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~~r 457 (1265)
|++ |++++|++ . .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +....+
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 89999963 2 23 89999999999999999999999999999999999999999999998653 234567
Q ss_pred hheeEEccCCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhc
Q 000830 458 QQIGLVNQEPALFAT-TIRENILYGKDDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIV 536 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~ 536 (1265)
++++||+|++.+|+. |++||+.++......+++.+.++.. |++........+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALL-----------GIEPLLDRYPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHc-----------CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 889999999999975 9999999875433333333333333 2333445566789999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccCCc
Q 000830 537 KNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISNPN 610 (1265)
Q Consensus 537 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 610 (1265)
.+|++||||||||+||+.++..+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 99999999999999999999999999988753 7899999999998866 99999999999999999999987653
No 464
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=4.2e-40 Score=361.84 Aligned_cols=210 Identities=29% Similarity=0.444 Sum_probs=170.7
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC---CCCcEEEECCcccCCCCHHHHh
Q 000830 1018 IELRGVHFSYPSRP-EVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYD---PTAGKVMVDGIDIKRLNLKSLR 1093 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~~~l~~lR 1093 (1265)
+.|+||+|+|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999998542 3579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cccEEEecCCCCCcc-cHHHHhccCCC----CCCHHHHHHHHHHhchHH-HHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000830 1094 KHIALVQQEPALFAT-SIYENILYGKD----GASEGEVIEAAKLANAHS-FISALPEGYSTKVGERGVQLSGGQKQRVAI 1167 (1265)
Q Consensus 1094 ~~i~~VpQdp~LF~g-TIreNl~~g~~----~~sd~ei~~al~~a~l~~-~i~~lp~Gldt~vge~G~~LSgGQkQrlaL 1167 (1265)
++++|+||++.+|.+ |++||+.++.. ....++... ...++ .++.+ +++.........||||||||++|
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~l 154 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRK----KRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSI 154 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHH----HHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHH
Confidence 999999999999987 99999986421 111111110 01111 22221 33333344556899999999999
Q ss_pred HHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCc-hhhh-ccCEEEEEeCCEEEEec
Q 000830 1168 ARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRL-STIK-NADQISVIESGKIIEQG 1236 (1265)
Q Consensus 1168 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl-~ti~-~~DrI~vl~~G~Ive~G 1236 (1265)
||||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||++ +.+. .||+|++|++|++++.|
T Consensus 155 aral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 155 AVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999999875 478999999998 4554 59999999999999876
No 465
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-40 Score=358.54 Aligned_cols=205 Identities=24% Similarity=0.468 Sum_probs=171.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
++++|++++|++ .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ..+++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 359999999999999999999999999999999999999999999999987753 4577899
Q ss_pred EEccCCccccc-cHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 462 LVNQEPALFAT-TIRENILYGKDD--ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
|++|++.++.+ |++||+.++... ....+.. ..+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999999876 999999874311 1111111 1122334333 344445566788999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEee
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 600 (1265)
|+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999998875 47899999999999865 9999999999998754
No 466
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=8.6e-40 Score=366.70 Aligned_cols=225 Identities=24% Similarity=0.420 Sum_probs=184.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCee-----CCCCChHH
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNN-----IKGLDLKW 455 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~-----~~~~~~~~ 455 (1265)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +...+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999964 358999999999999999999999999999999999999999999999998 77666544
Q ss_pred ----HhhheeEEccCCc--ccc-ccHHHHhccCC---CCCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 456 ----LRQQIGLVNQEPA--LFA-TTIRENILYGK---DDATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 456 ----~r~~i~~v~Q~~~--lf~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
.++.++||+|++. ++. .|+.+|+.+.. ......+..+ .+.+.+..++-+ ++..+..+.+|||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~-~~~~~~~~~~LS~Gq 156 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERVEID-AARIDDLPTTFSGGM 156 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHcCCC-hhHHhCCCccCCHHH
Confidence 3557999999984 444 48899986421 1111122211 233455555321 245677889999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCc
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSH 602 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~ 602 (1265)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~ 236 (258)
T PRK11701 157 QQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLT 236 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999988753 7899999999999975 999999999999999999
Q ss_pred chhccCCchHHH
Q 000830 603 EELISNPNSAYA 614 (1265)
Q Consensus 603 ~~l~~~~~~~~~ 614 (1265)
+++..++...|.
T Consensus 237 ~~~~~~~~~~~~ 248 (258)
T PRK11701 237 DQVLDDPQHPYT 248 (258)
T ss_pred HHHhcCCCCHHH
Confidence 998765444444
No 467
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=6.4e-40 Score=365.22 Aligned_cols=214 Identities=27% Similarity=0.401 Sum_probs=175.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhcc--CCCCCcEEEECCcccCCCCHHHH-hc
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRF--YDPTAGKVMVDGIDIKRLNLKSL-RK 1094 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl--~~p~~G~I~idG~di~~~~l~~l-R~ 1094 (1265)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+ ++|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999963 4589999999999999999999999999999999999 47999999999999988877664 45
Q ss_pred ccEEEecCCCCCcc-cHHHHhccCCCC---------CCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChh
Q 000830 1095 HIALVQQEPALFAT-SIYENILYGKDG---------ASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGG 1160 (1265)
Q Consensus 1095 ~i~~VpQdp~LF~g-TIreNl~~g~~~---------~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgG 1160 (1265)
.++|+||+|.+|.+ |++||+.+.... .+. +.+.++++..++.+. -.+..+. ..||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~~---~~LS~G 148 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEE------FLNRSVN---EGFSGG 148 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchh------hcccccc---cCcCHH
Confidence 69999999999876 899998653110 111 223333333333210 1122221 249999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc--cCEEEEEeCCEEEEecC
Q 000830 1161 QKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN--ADQISVIESGKIIEQGT 1237 (1265)
Q Consensus 1161 QkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~--~DrI~vl~~G~Ive~Gt 1237 (1265)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 149 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~ 228 (243)
T TIGR01978 149 EKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGD 228 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecC
Confidence 9999999999999999999999999999999999999999875 47899999999999986 79999999999999999
Q ss_pred hhhhhh
Q 000830 1238 HSSLVE 1243 (1265)
Q Consensus 1238 ~~eLl~ 1243 (1265)
++++..
T Consensus 229 ~~~~~~ 234 (243)
T TIGR01978 229 VELAKE 234 (243)
T ss_pred HHHhcc
Confidence 986543
No 468
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=329.16 Aligned_cols=213 Identities=31% Similarity=0.554 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|.|+|||.|+.. ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 688999999974 3448999999999999999999999999999999999999999999999999987 5678899999
Q ss_pred EEecCCCCCc-ccHHHHhccCCC--CCCHH----HHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFA-TSIYENILYGKD--GASEG----EVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~-gTIreNl~~g~~--~~sd~----ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
+++-+.-|+. -|.||||.|... +.++. ++.+..+.-++.+. +|+.+| +||-|+|||++||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~-------~~rRv~----~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEY-------LDRRVG----EFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHH-------HHHHHh----hhchhhHHHHHHHHH
Confidence 9997777875 499999987421 22233 33444444444444 344555 599999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLMR-KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
|+++|+|++||||||+||.-+.+.+++-|++... +++||+-||-++.++. ||+|+++.+|+++..|+++++.+.
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999999999875 8999999999999995 999999999999999999999763
No 469
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=9.1e-40 Score=366.05 Aligned_cols=221 Identities=25% Similarity=0.411 Sum_probs=181.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
++++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999963 35999999999999999999999999999999999999999999999999998888888888899
Q ss_pred EEccCCccc-cccHHHHhccCCCCCCH-HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000830 462 LVNQEPALF-ATTIRENILYGKDDATM-EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNP 539 (1265)
Q Consensus 462 ~v~Q~~~lf-~~ti~~ni~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 539 (1265)
|++|++.++ ..|++||+.++...... ...........+.+.+..+ |+.......+..||||||||++||||++.+|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 999998654 56999999886321000 0000000001122223332 2333345567789999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHcC-CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 540 SILLLDEATSALDAESENSVQEALDRVMV-GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 540 ~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 99999999999999999999999998754 7899999999999954 99999999999999999888754
No 470
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-40 Score=366.95 Aligned_cols=218 Identities=32% Similarity=0.539 Sum_probs=180.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCC--CCh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKG--LDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 453 (1265)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999964 3589999999999999999999999999999999999974 79999999998853 345
Q ss_pred HHHhhheeEEccCCccccc-cHHHHhccCCCC---CCHHH----HHHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 454 KWLRQQIGLVNQEPALFAT-TIRENILYGKDD---ATMEE----ITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~-ti~~ni~~~~~~---~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
..+|+.++|++|++.+|+. |++||+.++... ...++ +.++++..++ ..+........+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANL-------WNEVKDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC-------chhhhhHhhCCcccCCHHH
Confidence 6778899999999999975 999999865311 11111 2222222221 1112234456678899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEe------CCEEEE
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQ------GRKIVK 598 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~------~G~i~~ 598 (1265)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999988777999999999999865 99999997 899999
Q ss_pred eeCcchhccC
Q 000830 599 TGSHEELISN 608 (1265)
Q Consensus 599 ~g~~~~l~~~ 608 (1265)
.|+++++...
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999998654
No 471
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=8e-40 Score=356.80 Aligned_cols=205 Identities=34% Similarity=0.537 Sum_probs=171.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCC--CChHHHhhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKG--LDLKWLRQQ 459 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--~~~~~~r~~ 459 (1265)
++++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999964 358999999999999999999999999999999999999999999999998853 344567889
Q ss_pred eeEEccCCcccc-ccHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHh
Q 000830 460 IGLVNQEPALFA-TTIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAI 535 (1265)
Q Consensus 460 i~~v~Q~~~lf~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal 535 (1265)
++|++|++.+|+ .|++||+.++.. ....++..+. +.+.+..+ |++........+||||||||++|||||
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEER-----ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHH-----HHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999987 599999987532 1122221111 12233333 344455666789999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEE
Q 000830 536 VKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKI 596 (1265)
Q Consensus 536 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i 596 (1265)
+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999875 47999999999999975 999999999974
No 472
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.2e-39 Score=359.07 Aligned_cols=212 Identities=25% Similarity=0.383 Sum_probs=172.8
Q ss_pred cEEEEeEEEECCCCCC-CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHH---H
Q 000830 381 HIEFKDVSFCYPSRPD-VAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKW---L 456 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~ 456 (1265)
.|+++|++++|++... .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999974221 35899999999999999999999999999999999999999999999999998776643 2
Q ss_pred -hhheeEEccCCccccc-cHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHH
Q 000830 457 -RQQIGLVNQEPALFAT-TIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAIS 532 (1265)
Q Consensus 457 -r~~i~~v~Q~~~lf~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiA 532 (1265)
++.++|++|++.+|.. |++||+.++.. .....+.. ..+.+.+..+ |++........+||||||||++||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la 158 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSR-----NGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALA 158 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHH
Confidence 3579999999999886 99999986421 11111111 1111222222 222233445678999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEccCchhhhccCEEEEEeCCEEEEe
Q 000830 533 RAIVKNPSILLLDEATSALDAESENSVQEALDRVM-V-GRTTVVVAHRLSTIRNADVIAVVQGRKIVKT 599 (1265)
Q Consensus 533 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~ 599 (1265)
|||+.+|++|||||||++||+.+...+.+.|+++. + ++|+|++||+++.+..||++++|++|++++.
T Consensus 159 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 159 RAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999999998874 3 7899999999999888999999999999764
No 473
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-39 Score=354.59 Aligned_cols=201 Identities=28% Similarity=0.461 Sum_probs=168.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++++|++. . .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5789999999632 2 39999999999999999999999999999999999999999999999876554 357899
Q ss_pred EEccCCccccc-cHHHHhccCCC-CC-----CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 462 LVNQEPALFAT-TIRENILYGKD-DA-----TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~-~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
|++|++.+|.+ |++||+.++.. .. ..+++.++++..++ +........+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGL-----------AGLEKRLPGELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCC-----------HHHHhCCcccCCHHHHHHHHHHHH
Confidence 99999999986 99999987642 11 12223333333333 222334556899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEee
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 600 (1265)
++.+|++|||||||++||++++..+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 38999999999999876 9999999999998754
No 474
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.1e-39 Score=357.65 Aligned_cols=208 Identities=28% Similarity=0.473 Sum_probs=171.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChH---HHhh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLK---WLRQ 458 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~ 458 (1265)
|+++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 24589999999999999999999999999999999999999999999999998876544 3678
Q ss_pred heeEEccCCccc-cccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHh
Q 000830 459 QIGLVNQEPALF-ATTIRENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAI 535 (1265)
Q Consensus 459 ~i~~v~Q~~~lf-~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal 535 (1265)
.++|++|++.++ +.|++||+.++.. ..+.++..+.+. +.++.+ |++........+||||||||++||||+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVS-----AALDKV--GLLDKAKNFPIQLSGGEQQRVGIARAV 152 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHH-----HHHHHc--CChhhhhCCchhCCHHHHHHHHHHHHH
Confidence 999999999875 5699999987531 122322222111 112221 222234455678999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEE
Q 000830 536 VKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVK 598 (1265)
Q Consensus 536 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~ 598 (1265)
+.+|++|||||||++||+.+.+.+.+.|.++. ++.|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 153 VNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999998875 47999999999999976 99999999999863
No 475
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=6e-40 Score=375.35 Aligned_cols=200 Identities=27% Similarity=0.462 Sum_probs=172.0
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccEEEecCCCCCcc-cHH
Q 000830 1033 VVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIALVQQEPALFAT-SIY 1111 (1265)
Q Consensus 1033 ~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~g-TIr 1111 (1265)
.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 458999999999999999999999999999999999999999999999999976 445678999999999999976 999
Q ss_pred HHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcC
Q 000830 1112 ENILYGKD--GAS----EGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATS 1185 (1265)
Q Consensus 1112 eNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS 1185 (1265)
||+.+... ..+ ++++.++++..++.+. ......+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEA-----------ADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhH-----------hCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99976321 122 2234455555554332 223345799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHc-CCceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1186 ALDVESERVVQQALQRLM-RKRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1186 aLD~~te~~I~~~l~~~~-~~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
+||+.+.+.+++.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999875 47899999999999976 999999999999999999999764
No 476
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=364.92 Aligned_cols=220 Identities=32% Similarity=0.485 Sum_probs=184.0
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCC--CC
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKG--LD 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 452 (1265)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 36999999999963 3589999999999999999999999999999999999863 69999999999864 34
Q ss_pred hHHHhhheeEEccCCccccccHHHHhccCCCCC-----CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHH
Q 000830 453 LKWLRQQIGLVNQEPALFATTIRENILYGKDDA-----TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQ 527 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 527 (1265)
...+|++|+|++|++.+|+.|+.||+.++.... ..+.+.++++.+++.+.+ .......+.+|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-------KDKLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-------HHHhcCCcccCCHHHHH
Confidence 456788999999999999889999998763211 112223333333332222 22345667889999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEe---------CCEEE
Q 000830 528 RIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQ---------GRKIV 597 (1265)
Q Consensus 528 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~---------~G~i~ 597 (1265)
|++|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999988778999999999999865 99999997 89999
Q ss_pred EeeCcchhccCC
Q 000830 598 KTGSHEELISNP 609 (1265)
Q Consensus 598 ~~g~~~~l~~~~ 609 (1265)
+.|+.+++...+
T Consensus 249 ~~g~~~~~~~~~ 260 (274)
T PRK14265 249 EFSPTEQMFGSP 260 (274)
T ss_pred EeCCHHHHHhCC
Confidence 999999987653
No 477
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=364.50 Aligned_cols=219 Identities=28% Similarity=0.439 Sum_probs=184.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCC-----CcceEEECCeeCCCC--Ch
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEP-----LSGEILLDGNNIKGL--DL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 453 (1265)
.+.+++++++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++... ..
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4889999999963 4599999999999999999999999999999999999987 799999999998643 34
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCCCC-----CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKDDA-----TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQR 528 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqr 528 (1265)
..+|+.++|++|++.+|+.|+.||+.++.... ..+++.++++..++.+. .....++.+.+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------i~~~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDE-------VKDKLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchh-------hhhhhhCCcccCCHHHHHH
Confidence 46788899999999999899999998864211 11234444444433222 2223456778999999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEe--------CCEEEEe
Q 000830 529 IAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQ--------GRKIVKT 599 (1265)
Q Consensus 529 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~--------~G~i~~~ 599 (1265)
++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998778999999999998865 99999996 8999999
Q ss_pred eCcchhccCC
Q 000830 600 GSHEELISNP 609 (1265)
Q Consensus 600 g~~~~l~~~~ 609 (1265)
|+++++++.+
T Consensus 238 g~~~~~~~~~ 247 (261)
T PRK14263 238 GPTAQIFQNP 247 (261)
T ss_pred CCHHHHHhCC
Confidence 9999987653
No 478
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=365.86 Aligned_cols=221 Identities=28% Similarity=0.512 Sum_probs=183.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCC-----cceEEECCeeCCC--CC
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPL-----SGEILLDGNNIKG--LD 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~ 452 (1265)
+.|+++|++|+|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 35899999999999999999999999999999999999985 8999999998753 34
Q ss_pred hHHHhhheeEEccCCccccccHHHHhccCCCC---CCH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 453 LKWLRQQIGLVNQEPALFATTIRENILYGKDD---ATM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
...+|+.++|++|++.+|+.|++||+.++... .+. +.+.++++..++.+ ..+...+..+.+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWD-------EIKHKIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-------hhhhHhcCCcccCCHHH
Confidence 45778899999999999999999999865211 111 12222333332221 12234566778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeC-----CEEE
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQG-----RKIV 597 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~-----G~i~ 597 (1265)
|||++|||||+++|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999998864 48999999999999875 999999999 9999
Q ss_pred EeeCcchhccCCc
Q 000830 598 KTGSHEELISNPN 610 (1265)
Q Consensus 598 ~~g~~~~l~~~~~ 610 (1265)
+.|+++++...+.
T Consensus 236 ~~~~~~~~~~~~~ 248 (261)
T PRK14258 236 EFGLTKKIFNSPH 248 (261)
T ss_pred EeCCHHHHHhCCC
Confidence 9999999876543
No 479
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.2e-40 Score=369.89 Aligned_cols=213 Identities=32% Similarity=0.543 Sum_probs=182.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhe
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQI 460 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 460 (1265)
.++++|++++|+. ++.+|+||||+|++|+++|++||||||||||+++|+|++.|++|+|.++|.+...- ...+|++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999972 24699999999999999999999999999999999999999999999999988665 77888999
Q ss_pred eEEccCCccccc-cHHHHhccCC-----CC-CCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHH
Q 000830 461 GLVNQEPALFAT-TIRENILYGK-----DD-ATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISR 533 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~-----~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiAR 533 (1265)
|||||+|.+++. |++||+.|.. +. ...+.+.+.++..+ |++ .-..+..+||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~-------L~~----~~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFG-------LED----KANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcC-------Cch----hhCcchhhcCHHHHHHHHHHH
Confidence 999999998877 9999998742 11 11233444444332 332 114456789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC-C-CeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 534 AIVKNPSILLLDEATSALDAESENSVQEALDRVMV-G-RTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 534 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~-~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
||+.+|++|||||||++||+.+...+.+.|+++.+ + +||+++||.++.+.. ||+|++|++|+++..|+.+++..
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~ 226 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKE 226 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999865 5 799999999999987 99999999999999998888654
No 480
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.4e-39 Score=366.01 Aligned_cols=230 Identities=27% Similarity=0.464 Sum_probs=189.3
Q ss_pred cEEEEeEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCH-
Q 000830 1017 TIELRGVHFSYPSR------PEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNL- 1089 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l- 1089 (1265)
.|+++||+++|+.. .+.++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38899999999731 02468999999999999999999999999999999999999999999999999987765
Q ss_pred --HHHhcccEEEecCCC--CC-cccHHHHhccCCC---CCCHHHHHHHHHHhchHHHHHhCCCCccc-cccCCCCCCChh
Q 000830 1090 --KSLRKHIALVQQEPA--LF-ATSIYENILYGKD---GASEGEVIEAAKLANAHSFISALPEGYST-KVGERGVQLSGG 1160 (1265)
Q Consensus 1090 --~~lR~~i~~VpQdp~--LF-~gTIreNl~~g~~---~~sd~ei~~al~~a~l~~~i~~lp~Gldt-~vge~G~~LSgG 1160 (1265)
..+|+.++|+||++. ++ ..|+++|+.+... ..+.+ .....+.+.++.+ |+++ ........||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~-----~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~G 155 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKA-----ERLARASEMLRAV--DLDDSVLDKRPPQLSGG 155 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHH-----HHHHHHHHHHHHc--CCChhHhhCCCccCChH
Confidence 347889999999983 43 4699999864211 11111 1122234445544 5653 455667789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 000830 1161 QKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGT 1237 (1265)
Q Consensus 1161 QkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt 1237 (1265)
||||++|||||+.+|++|||||||++||+++...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 156 e~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~ 235 (268)
T PRK10419 156 QLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQP 235 (268)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCC
Confidence 99999999999999999999999999999999999999998753 7899999999999986 99999999999999999
Q ss_pred hhhhhhcCCcHHHHHHH
Q 000830 1238 HSSLVENEDGAYFKLIN 1254 (1265)
Q Consensus 1238 ~~eLl~~~~g~f~~l~~ 1254 (1265)
++++.. .++.|..-+.
T Consensus 236 ~~~~~~-~~~~~~~~~~ 251 (268)
T PRK10419 236 VGDKLT-FSSPAGRVLQ 251 (268)
T ss_pred hhhccC-CCCHHHHHHH
Confidence 999986 5666654443
No 481
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=364.44 Aligned_cols=221 Identities=24% Similarity=0.371 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCC--------cceEEECCeeCCCCCh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPL--------SGEILLDGNNIKGLDL 453 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~--------~G~i~~~g~~~~~~~~ 453 (1265)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 689999999963 35999999999999999999999999999999999999998 9999999999988887
Q ss_pred HHHhhheeEEccCCc-cccccHHHHhccCCC-CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHH
Q 000830 454 KWLRQQIGLVNQEPA-LFATTIRENILYGKD-DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAI 531 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~-lf~~ti~~ni~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriai 531 (1265)
..+++.++|++|++. +|..|++||+.++.. ...............+.+.+..+ |+++..+....+||||||||++|
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 156 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA--GATALVGRDVTTLSGGELARVQF 156 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHH
Confidence 788888999999986 567899999987632 11000000000001112223332 45566677788999999999999
Q ss_pred HHHhc---------cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEe
Q 000830 532 SRAIV---------KNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKT 599 (1265)
Q Consensus 532 ARal~---------~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~ 599 (1265)
||||+ .+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.
T Consensus 157 aral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~ 236 (272)
T PRK13547 157 ARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAH 236 (272)
T ss_pred HHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEe
Confidence 99999 59999999999999999999999999998753 7999999999999865 999999999999999
Q ss_pred eCcchhcc
Q 000830 600 GSHEELIS 607 (1265)
Q Consensus 600 g~~~~l~~ 607 (1265)
|++++++.
T Consensus 237 g~~~~~~~ 244 (272)
T PRK13547 237 GAPADVLT 244 (272)
T ss_pred cCHHHHcC
Confidence 99988864
No 482
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=362.63 Aligned_cols=220 Identities=29% Similarity=0.530 Sum_probs=184.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCCC--ChH
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKGL--DLK 454 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~~~ 454 (1265)
++++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||+++... +..
T Consensus 4 l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 4 IEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 789999999963 459999999999999999999999999999999999874 4899999999998653 456
Q ss_pred HHhhheeEEccCCccccccHHHHhccCCC--CC-CHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHH
Q 000830 455 WLRQQIGLVNQEPALFATTIRENILYGKD--DA-TME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQ 527 (1265)
Q Consensus 455 ~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~--~~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 527 (1265)
.+|++++|+||++.+|+.|++||+.++.. .. ..+ ++.++++..++.+++. ...+..+.+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-------DKLDKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-------HHHhCCcccCCHHHHH
Confidence 77889999999999999999999987532 11 112 2333344444333322 2245667899999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhc
Q 000830 528 RIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELI 606 (1265)
Q Consensus 528 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 606 (1265)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999999876 9999999999999999999987
Q ss_pred cCCch
Q 000830 607 SNPNS 611 (1265)
Q Consensus 607 ~~~~~ 611 (1265)
..+..
T Consensus 234 ~~~~~ 238 (250)
T PRK14266 234 INPKD 238 (250)
T ss_pred hCCCC
Confidence 55333
No 483
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.1e-40 Score=360.48 Aligned_cols=211 Identities=40% Similarity=0.574 Sum_probs=178.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++|+|++ +++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~--~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPH--KRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChh--hcceE
Confidence 468999999974 3599999999999999999999999999999999999999999999999998765542 67899
Q ss_pred EEccCCccccc-cHHHHhccCCCC--CCH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 462 LVNQEPALFAT-TIRENILYGKDD--ATM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
||+|++.+|.+ |++||+.++... .+. +++.++++..+ ++........+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQ-----------LEGYANRKPSQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------CchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999976 999999865321 111 12222222222 3334445567899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|+.+|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++++.. ||+|++|++|++++.|+++++...
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999998753 8999999999999865 999999999999999998887654
No 484
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.1e-39 Score=358.50 Aligned_cols=215 Identities=35% Similarity=0.522 Sum_probs=180.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
|+++|++++|++ +++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 478999999974 359999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEccCCccccc-cHHHHhccCCCCC--CHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccC
Q 000830 462 LVNQEPALFAT-TIRENILYGKDDA--TMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKN 538 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 538 (1265)
|+||++.+|++ |++||+.++.... +..+.. ..+.+.+..++ +.........+||||||||++|||||+++
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~-----~~~~~~l~~~~--l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIK-----ARVEELLELVQ--LEGLGDRYPNQLSGGQRQRVALARALAVE 148 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHH-----HHHHHHHHHcC--CHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 9999998764311 111111 11223344332 22234455678999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 539 PSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 539 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
|+++||||||++||+++++.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 149 PQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999998754 7999999999999866 999999999999999999998754
No 485
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.4e-40 Score=369.36 Aligned_cols=214 Identities=32% Similarity=0.546 Sum_probs=187.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhccc
Q 000830 1017 TIELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHI 1096 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 1096 (1265)
.|+++||+.+|.. ...+|+||||+|++||.+|++||||||||||+++|+|+..|++|+|.++|.|...- ...+|+++
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4789999999973 24689999999999999999999999999999999999999999999999998765 77889999
Q ss_pred EEEecCCCCCcc-cHHHHhccCC-----C-CCCHHHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000830 1097 ALVQQEPALFAT-SIYENILYGK-----D-GASEGEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIAR 1169 (1265)
Q Consensus 1097 ~~VpQdp~LF~g-TIreNl~~g~-----~-~~sd~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLAR 1169 (1265)
|||||+|.++.. |++|||.+.. + ...++.+.+.++..++.+.- +. ....||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~----~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NK----KVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Cc----chhhcCHHHHHHHHHHH
Confidence 999999998865 9999998742 1 12245677788777775421 22 33569999999999999
Q ss_pred HhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC-C-ceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhc
Q 000830 1170 AVLKNPEILLLDEATSALDVESERVVQQALQRLMR-K-RTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVEN 1244 (1265)
Q Consensus 1170 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~-~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~ 1244 (1265)
||+.+|++|||||||++||+.+...+++.|++..+ + +||++.||.++.+.. ||||++|++|+++..|+++++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999876 4 699999999999988 999999999999999999998763
No 486
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-40 Score=342.69 Aligned_cols=220 Identities=30% Similarity=0.518 Sum_probs=187.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHH-hhhe
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWL-RQQI 460 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 460 (1265)
++.+|++++|++ ..+++||||++++||+++|+|||||||||++|+|.|+|+|++|+|.++|+||...++... |..|
T Consensus 5 L~v~~l~k~FGG---l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 5 LEVRGLSKRFGG---LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred eeeccceeecCC---EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccc
Confidence 678999999963 569999999999999999999999999999999999999999999999999999998765 5679
Q ss_pred eEEccCCccccc-cHHHHhccCCCCC-----------CHHHHHHHH-HHhcHHHHHhcCcccccccccCCCCCCChHHHH
Q 000830 461 GLVNQEPALFAT-TIRENILYGKDDA-----------TMEEITRAA-KLSEAMSFISNLPERFETQVGERGIQLSGGQKQ 527 (1265)
Q Consensus 461 ~~v~Q~~~lf~~-ti~~ni~~~~~~~-----------~~~~~~~~~-~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkq 527 (1265)
+--+|.+.+|++ ||.||+..+.... ...+-.++. +..++.+++ |++....+...+||+|||.
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~v-----gL~~~a~~~A~~LsyG~qR 156 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFV-----GLGELADRPAGNLSYGQQR 156 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHc-----CCchhhcchhhcCChhHhH
Confidence 999999999987 9999998763211 000111121 222233333 4555566677789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcch
Q 000830 528 RIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEE 604 (1265)
Q Consensus 528 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~ 604 (1265)
|+.|||||+.+|++|+||||.++|.+.....+.+.|+++++ |.|+++|-||++.+.. ||||+||+.|+++.+|+|+|
T Consensus 157 ~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~e 236 (250)
T COG0411 157 RLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEE 236 (250)
T ss_pred HHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHH
Confidence 99999999999999999999999999999999999999874 5999999999999977 99999999999999999999
Q ss_pred hccCC
Q 000830 605 LISNP 609 (1265)
Q Consensus 605 l~~~~ 609 (1265)
+.+++
T Consensus 237 V~~dp 241 (250)
T COG0411 237 VRNNP 241 (250)
T ss_pred HhcCH
Confidence 98764
No 487
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-40 Score=348.20 Aligned_cols=225 Identities=36% Similarity=0.603 Sum_probs=197.5
Q ss_pred cEEEEeEEEECCCCCCc---------------------ccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCc
Q 000830 1017 TIELRGVHFSYPSRPEV---------------------VIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAG 1075 (1265)
Q Consensus 1017 ~I~~~~Vsf~Y~~~~~~---------------------~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G 1075 (1265)
.|+++||+.-+..++.. .-++|+||+|+.||+..|.|-||||||||++++-|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 47888888877643221 247899999999999999999999999999999999999999
Q ss_pred EEEECCcccCCCCHHHHh----cccEEEecCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHHhCCC
Q 000830 1076 KVMVDGIDIKRLNLKSLR----KHIALVQQEPALFA-TSIYENILYGKD--GAS----EGEVIEAAKLANAHSFISALPE 1144 (1265)
Q Consensus 1076 ~I~idG~di~~~~l~~lR----~~i~~VpQdp~LF~-gTIreNl~~g~~--~~s----d~ei~~al~~a~l~~~i~~lp~ 1144 (1265)
+|++||.|+..++.++|| +++++|+|..-||+ .||.||..||.. ..+ ++...++++.+|+.+|-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999987764 57999999999985 599999999853 223 3456788999999999888774
Q ss_pred CccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-c
Q 000830 1145 GYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-A 1221 (1265)
Q Consensus 1145 Gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~ 1221 (1265)
+||||+|||+.|||||..+|+||++|||.|||||--...+|+.|.++.+ .||+++|||+|++... .
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 6999999999999999999999999999999999999999999988754 6899999999999755 9
Q ss_pred CEEEEEeCCEEEEecChhhhhhcCCcHHHHH
Q 000830 1222 DQISVIESGKIIEQGTHSSLVENEDGAYFKL 1252 (1265)
Q Consensus 1222 DrI~vl~~G~Ive~Gt~~eLl~~~~g~f~~l 1252 (1265)
|||.+|++|+|++.|||+|.+.++...|-+-
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~ 263 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVRD 263 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHHH
Confidence 9999999999999999999998777666443
No 488
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=370.63 Aligned_cols=219 Identities=29% Similarity=0.541 Sum_probs=184.7
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-----CCcceEEECCeeCCCC--C
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-----PLSGEILLDGNNIKGL--D 452 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~ 452 (1265)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 35899999999974 359999999999999999999999999999999999986 6899999999998643 3
Q ss_pred hHHHhhheeEEccCCccccccHHHHhccCCCCC--------------C-----HHHHHHHHHHhcHHHHHhcCccccccc
Q 000830 453 LKWLRQQIGLVNQEPALFATTIRENILYGKDDA--------------T-----MEEITRAAKLSEAMSFISNLPERFETQ 513 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~~~--------------~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~ 513 (1265)
...+|++++||+|++.+|+.||+||+.++.... . .+++.++++.. .+++++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~l~~~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQA-------ALWDEVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHc-------CCchhhhHH
Confidence 556788999999999999999999999763210 0 01111111111 334445566
Q ss_pred ccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEE-EEE
Q 000830 514 VGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVI-AVV 591 (1265)
Q Consensus 514 ~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i-~~l 591 (1265)
....+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++ ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 77888999999999999999999999999999999999999999999999998777999999999999865 9997 577
Q ss_pred eCCEEEEeeCcchhccC
Q 000830 592 QGRKIVKTGSHEELISN 608 (1265)
Q Consensus 592 ~~G~i~~~g~~~~l~~~ 608 (1265)
++|++++.|+++++.+.
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999888654
No 489
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=363.07 Aligned_cols=219 Identities=31% Similarity=0.509 Sum_probs=181.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC--C---CcceEEECCeeCCC--CCh
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE--P---LSGEILLDGNNIKG--LDL 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~--~~~ 453 (1265)
.|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999973 358999999999999999999999999999999999975 5 59999999998864 334
Q ss_pred HHHhhheeEEccCCccccccHHHHhccCCC--CC-CHH----HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 454 KWLRQQIGLVNQEPALFATTIRENILYGKD--DA-TME----EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~~~~--~~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
..+++.++|++|++.+|+.|++||+.++.. .. ..+ ++.++++..+ +.+++.......+.+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~i~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAA-------IWDEVKDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcC-------CccchhhHHhcCcccCCHHHH
Confidence 567788999999999999999999987521 11 111 1222222222 112223345566789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchh
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEEL 605 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l 605 (1265)
||++|||||+.+|++|||||||++||+.++..+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|+..++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999865 999999999999999998888
Q ss_pred ccCC
Q 000830 606 ISNP 609 (1265)
Q Consensus 606 ~~~~ 609 (1265)
...+
T Consensus 235 ~~~~ 238 (252)
T PRK14255 235 FLNP 238 (252)
T ss_pred hcCC
Confidence 7653
No 490
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.4e-39 Score=364.25 Aligned_cols=227 Identities=24% Similarity=0.442 Sum_probs=182.7
Q ss_pred cEEEEeEEEECCCC------CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChH
Q 000830 381 HIEFKDVSFCYPSR------PDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLK 454 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~ 454 (1265)
.|+++||+++|+.. .+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999998765555
Q ss_pred HHhhheeEEccCCc--cccc-cHHHHhccCCC---CCCH----HHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChH
Q 000830 455 WLRQQIGLVNQEPA--LFAT-TIRENILYGKD---DATM----EEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGG 524 (1265)
Q Consensus 455 ~~r~~i~~v~Q~~~--lf~~-ti~~ni~~~~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 524 (1265)
..++.++||+|++. +++. |+.+|+.++.. .... +++.++++..++. ++ .......+||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~~----~~~~~~~~LS~G 153 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLL------PD----HASYYPHMLAPG 153 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCC------hH----HHhcCchhcCHH
Confidence 66678999999985 4544 89999875321 1111 1222233332221 11 123345689999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeC
Q 000830 525 QKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 525 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 601 (1265)
||||++|||||+.+|+||||||||++||+.+...+.+.|.++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 154 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 233 (267)
T PRK15112 154 QKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGS 233 (267)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCC
Confidence 9999999999999999999999999999999999999999875 38999999999999986 99999999999999999
Q ss_pred cchhccCC-chHHHHHH
Q 000830 602 HEELISNP-NSAYAALV 617 (1265)
Q Consensus 602 ~~~l~~~~-~~~~~~~~ 617 (1265)
++++...+ ...+..++
T Consensus 234 ~~~~~~~~~~~~~~~~~ 250 (267)
T PRK15112 234 TADVLASPLHELTKRLI 250 (267)
T ss_pred HHHHhcCCCCHHHHHHH
Confidence 99987653 23444454
No 491
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-39 Score=356.63 Aligned_cols=209 Identities=33% Similarity=0.487 Sum_probs=176.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhhee
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIG 461 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 461 (1265)
++++||+++|++ . ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEE
Confidence 689999999963 2 2489999999999999999999999999999999999999999999998765442 56799
Q ss_pred EEccCCccccc-cHHHHhccCC-CCC--C---HHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHH
Q 000830 462 LVNQEPALFAT-TIRENILYGK-DDA--T---MEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRA 534 (1265)
Q Consensus 462 ~v~Q~~~lf~~-ti~~ni~~~~-~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARa 534 (1265)
|++|++.+|.+ |+.||+.++. +.. . .+++.++++..++ +..+......||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGI-----------EDLLARLPGQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCc-----------HHHHhCCcccCCHHHHHHHHHHHH
Confidence 99999999986 9999998753 111 1 1233334444433 333444556899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhccC
Q 000830 535 IVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELISN 608 (1265)
Q Consensus 535 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 608 (1265)
++++|+++||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999988743 7899999999999876 999999999999999999888754
No 492
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.1e-39 Score=358.38 Aligned_cols=214 Identities=26% Similarity=0.416 Sum_probs=171.2
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC---CCcceEEECCeeCCCCChHHHh
Q 000830 382 IEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE---PLSGEILLDGNNIKGLDLKWLR 457 (1265)
Q Consensus 382 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~~~~~~~~~~r 457 (1265)
+.|+||+|+|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999997542 3579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred hheeEEccCCccccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHH-HHhcCcccccccccCCCCCCChHHHHHHHHHHHh
Q 000830 458 QQIGLVNQEPALFAT-TIRENILYGKDDATMEEITRAAKLSEAMS-FISNLPERFETQVGERGIQLSGGQKQRIAISRAI 535 (1265)
Q Consensus 458 ~~i~~v~Q~~~lf~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~-~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal 535 (1265)
++++|++|++.+|++ |++||+.++..........++.+...+.+ .+..+ ++.........+||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 889999999999987 99999987532110000000111011111 12221 233334456678999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCc-hhh-hccCEEEEEeCCEEEEee
Q 000830 536 VKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRL-STI-RNADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 536 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l-~~~-~~~d~i~~l~~G~i~~~g 600 (1265)
+++|++|||||||++||+.+...+.+.|.++. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999998875 478999999998 455 459999999999999865
No 493
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.8e-39 Score=378.30 Aligned_cols=212 Identities=29% Similarity=0.440 Sum_probs=179.4
Q ss_pred eEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCC----HHHHhcccE
Q 000830 1022 GVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLN----LKSLRKHIA 1097 (1265)
Q Consensus 1022 ~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~----l~~lR~~i~ 1097 (1265)
|++++|++ .. + |+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|++++
T Consensus 4 ~l~~~~~~---~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 78999963 23 4 999999999999999999999999999999999999999999999986542 345688999
Q ss_pred EEecCCCCCcc-cHHHHhccCCCCCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000830 1098 LVQQEPALFAT-SIYENILYGKDGASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVL 1172 (1265)
Q Consensus 1098 ~VpQdp~LF~g-TIreNl~~g~~~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARALl 1172 (1265)
||||++.+|.. |++||+.++...... +.+.+.++..++. ........+||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~-----------~~~~~~~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIG-----------HLLGRLPGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCCh-----------hHhcCChhhCCHHHHHHHHHHHHHH
Confidence 99999999975 999999876432221 2244445444443 3344445689999999999999999
Q ss_pred cCCCEEEEecCcCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhhcCCcHH
Q 000830 1173 KNPEILLLDEATSALDVESERVVQQALQRLMR--KRTTIIVAHRLSTIKN-ADQISVIESGKIIEQGTHSSLVENEDGAY 1249 (1265)
Q Consensus 1173 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHRl~ti~~-~DrI~vl~~G~Ive~Gt~~eLl~~~~g~f 1249 (1265)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 99999999999999999999999999998764 6899999999999876 99999999999999999999987655444
No 494
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=362.46 Aligned_cols=202 Identities=27% Similarity=0.442 Sum_probs=171.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCcEEEECCcccCCCCHHHHhcccE
Q 000830 1018 IELRGVHFSYPSRPEVVIFKDFNLKVRAGKSMALVGQSGSGKSTVLSLILRFYDPTAGKVMVDGIDIKRLNLKSLRKHIA 1097 (1265)
Q Consensus 1018 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 1097 (1265)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +..++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999963 3589999999999999999999999999999999999999999999999998642 34689
Q ss_pred EEecCCCCCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000830 1098 LVQQEPALFA-TSIYENILYGKD--GASE----GEVIEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARA 1170 (1265)
Q Consensus 1098 ~VpQdp~LF~-gTIreNl~~g~~--~~sd----~ei~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQrlaLARA 1170 (1265)
|+||++.+|. .|++||+.++.. ..+. +++.++++..++.+. ......+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGA-----------EKRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhH-----------hhCChhhCCHHHHHHHHHHHH
Confidence 9999999887 699999976421 1222 234445555544433 333456799999999999999
Q ss_pred hccCCCEEEEecCcCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchhhhc-cCEEEEEe--CCEEEEecCh
Q 000830 1171 VLKNPEILLLDEATSALDVESERVVQQALQRLM--RKRTTIIVAHRLSTIKN-ADQISVIE--SGKIIEQGTH 1238 (1265)
Q Consensus 1171 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHRl~ti~~-~DrI~vl~--~G~Ive~Gt~ 1238 (1265)
|+++|++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999999874 37899999999999876 99999998 5999998764
No 495
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=361.24 Aligned_cols=226 Identities=28% Similarity=0.471 Sum_probs=185.2
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECC------eeCCCCCh
Q 000830 380 GHIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDG------NNIKGLDL 453 (1265)
Q Consensus 380 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g------~~~~~~~~ 453 (1265)
..++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| +++...+.
T Consensus 9 ~~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~ 85 (257)
T PRK14246 9 DVFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDA 85 (257)
T ss_pred hheeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCH
Confidence 45999999999964 4589999999999999999999999999999999999999997766665 56666667
Q ss_pred HHHhhheeEEccCCccccc-cHHHHhccCCCC--C-CHHHH----HHHHHHhcHHHHHhcCcccccccccCCCCCCChHH
Q 000830 454 KWLRQQIGLVNQEPALFAT-TIRENILYGKDD--A-TMEEI----TRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQ 525 (1265)
Q Consensus 454 ~~~r~~i~~v~Q~~~lf~~-ti~~ni~~~~~~--~-~~~~~----~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 525 (1265)
..+|++++|++|++.+|.+ |++||+.++... . ..++. .++++..++.+ .......+.+..|||||
T Consensus 86 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~LS~G~ 158 (257)
T PRK14246 86 IKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWK-------EVYDRLNSPASQLSGGQ 158 (257)
T ss_pred HHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCc-------cchhhhcCCcccCCHHH
Confidence 7788999999999999976 999999876321 1 12222 22222222211 11123456778899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhh-ccCEEEEEeCCEEEEeeCcch
Q 000830 526 KQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMVGRTTVVVAHRLSTIR-NADVIAVVQGRKIVKTGSHEE 604 (1265)
Q Consensus 526 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~-~~d~i~~l~~G~i~~~g~~~~ 604 (1265)
|||++||||++.+|+++||||||++||+.++..+.+.|.++.+++|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 159 ~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~ 238 (257)
T PRK14246 159 QQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNE 238 (257)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999999998877899999999999995 499999999999999999999
Q ss_pred hccCCchHHHH
Q 000830 605 LISNPNSAYAA 615 (1265)
Q Consensus 605 l~~~~~~~~~~ 615 (1265)
+.+.+...|.+
T Consensus 239 ~~~~~~~~~~~ 249 (257)
T PRK14246 239 IFTSPKNELTE 249 (257)
T ss_pred HHhCCCcHHHH
Confidence 88764444443
No 496
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3e-39 Score=363.18 Aligned_cols=220 Identities=26% Similarity=0.380 Sum_probs=178.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCC---cceEEECCeeCCCC-----C
Q 000830 381 HIEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPL---SGEILLDGNNIKGL-----D 452 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~~~~~-----~ 452 (1265)
-|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 45899999999999999999999999999999999999986 49999999988653 2
Q ss_pred hHHHhhheeEEccCCccccc-cHHHHhccCCCCCCH--H---HHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHH
Q 000830 453 LKWLRQQIGLVNQEPALFAT-TIRENILYGKDDATM--E---EITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQK 526 (1265)
Q Consensus 453 ~~~~r~~i~~v~Q~~~lf~~-ti~~ni~~~~~~~~~--~---~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqk 526 (1265)
...++++++|++|++.+|+. |++||+.++...... . ..........+.+.+..+ |++......+.+||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRV--GMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHc--CCHHHHhCCccccCHHHH
Confidence 35667889999999998885 999999876421100 0 000000011122233322 233334556778999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcc
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM--VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHE 603 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~ 603 (1265)
||++|||||+.+|++|||||||++||+++...+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999875 37999999999998755 9999999999999999998
Q ss_pred hh
Q 000830 604 EL 605 (1265)
Q Consensus 604 ~l 605 (1265)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 86
No 497
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=9.2e-40 Score=373.80 Aligned_cols=203 Identities=23% Similarity=0.418 Sum_probs=169.9
Q ss_pred CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCChHHHhhheeEEccCCccccc-cHH
Q 000830 397 VAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFAT-TIR 475 (1265)
Q Consensus 397 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti~ 475 (1265)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|+++|||||++.++.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 458999999999999999999999999999999999999999999999999875 345678899999999999976 999
Q ss_pred HHhccCCC--CCCHHHHHHHHHHhcHHHHHhcCcccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCH
Q 000830 476 ENILYGKD--DATMEEITRAAKLSEAMSFISNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDA 553 (1265)
Q Consensus 476 ~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~ 553 (1265)
||+.+... ..+..+..+ .+.+.+..+ |++........+||||||||++|||||+.+|++|||||||++||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEE-----RAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred HHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 99987421 112222111 111223222 233334455678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHc-CCCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeCcchhcc
Q 000830 554 ESENSVQEALDRVM-VGRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGSHEELIS 607 (1265)
Q Consensus 554 ~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 607 (1265)
.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 99999999999875 48999999999999976 99999999999999999988764
No 498
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.8e-39 Score=361.63 Aligned_cols=215 Identities=25% Similarity=0.332 Sum_probs=173.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhcc--CCCcceEEECCeeCCCCChHHH-hh
Q 000830 382 IEFKDVSFCYPSRPDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFY--EPLSGEILLDGNNIKGLDLKWL-RQ 458 (1265)
Q Consensus 382 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~~~g~~~~~~~~~~~-r~ 458 (1265)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+.... +.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 478999999963 35899999999999999999999999999999999994 7999999999999988776554 45
Q ss_pred heeEEccCCccccc-cHHHHhccCCCC---------CCHHHHHHHHHHhcHHHHHhcCcccccc-cccCCCC-CCChHHH
Q 000830 459 QIGLVNQEPALFAT-TIRENILYGKDD---------ATMEEITRAAKLSEAMSFISNLPERFET-QVGERGI-QLSGGQK 526 (1265)
Q Consensus 459 ~i~~v~Q~~~lf~~-ti~~ni~~~~~~---------~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~~~~g~-~LSgGqk 526 (1265)
.++||+|++.+|++ |++||+.+.... .+.++..+ .+.+.+..+ |++. ....... +||||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~ 150 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLK-----LLKAKLALL--GMDEEFLNRSVNEGFSGGEK 150 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHH-----HHHHHHHHc--CCchhhcccccccCcCHHHH
Confidence 59999999999986 999999764211 01111111 111222222 2221 1223333 5999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhc--cCEEEEEeCCEEEEeeCcc
Q 000830 527 QRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVM-VGRTTVVVAHRLSTIRN--ADVIAVVQGRKIVKTGSHE 603 (1265)
Q Consensus 527 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~--~d~i~~l~~G~i~~~g~~~ 603 (1265)
||++|||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 151 KRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999999875 47999999999999975 7999999999999999887
Q ss_pred hhc
Q 000830 604 ELI 606 (1265)
Q Consensus 604 ~l~ 606 (1265)
++.
T Consensus 231 ~~~ 233 (243)
T TIGR01978 231 LAK 233 (243)
T ss_pred Hhc
Confidence 543
No 499
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3.3e-39 Score=363.03 Aligned_cols=227 Identities=26% Similarity=0.418 Sum_probs=185.1
Q ss_pred cEEEEeEEEECCCC------CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccCCCcceEEECCeeCCCCCh-
Q 000830 381 HIEFKDVSFCYPSR------PDVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKGLDL- 453 (1265)
Q Consensus 381 ~i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~- 453 (1265)
.|+++||+|+|+.. .++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 37899999999731 13469999999999999999999999999999999999999999999999999887765
Q ss_pred --HHHhhheeEEccCCc--ccc-ccHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHhcCcccccc-cccCCCCCCChH
Q 000830 454 --KWLRQQIGLVNQEPA--LFA-TTIRENILYGKD---DATMEEITRAAKLSEAMSFISNLPERFET-QVGERGIQLSGG 524 (1265)
Q Consensus 454 --~~~r~~i~~v~Q~~~--lf~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~~~~g~~LSgG 524 (1265)
..+++.++|++|++. ++. .|+.||+.+... ..... .....+.+.+..+ |+++ .....+..||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~-----~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~G 155 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKA-----ERLARASEMLRAV--DLDDSVLDKRPPQLSGG 155 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHH-----HHHHHHHHHHHHc--CCChhHhhCCCccCChH
Confidence 346788999999983 443 599999865321 11111 1111223334433 4543 456778899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEeeC
Q 000830 525 QKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTGS 601 (1265)
Q Consensus 525 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g~ 601 (1265)
||||++|||||+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 156 e~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~ 235 (268)
T PRK10419 156 QLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQP 235 (268)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCC
Confidence 99999999999999999999999999999999999999988753 7999999999999975 99999999999999999
Q ss_pred cchhccCCchHHH
Q 000830 602 HEELISNPNSAYA 614 (1265)
Q Consensus 602 ~~~l~~~~~~~~~ 614 (1265)
++++....+..+.
T Consensus 236 ~~~~~~~~~~~~~ 248 (268)
T PRK10419 236 VGDKLTFSSPAGR 248 (268)
T ss_pred hhhccCCCCHHHH
Confidence 9998765333333
No 500
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-39 Score=352.31 Aligned_cols=231 Identities=32% Similarity=0.555 Sum_probs=183.7
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHHhccC-C----CcceEEECCeeCCCCChHH
Q 000830 382 IEFKDVSFCYPSRP-DVAIFDKFCLDIPAGKIVALVGGSGSGKSTVISLIERFYE-P----LSGEILLDGNNIKGLDLKW 455 (1265)
Q Consensus 382 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-~----~~G~i~~~g~~~~~~~~~~ 455 (1265)
++++|++.+|+... ...+++||||++++||++||||+|||||||+.+.|+|+++ | .+|+|.++|+|+-.++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999987432 3568999999999999999999999999999999999998 4 5799999999999998875
Q ss_pred Hh----hheeEEccCCc--cccc-cHHHHhc----cCCCCCCHHH-HHHHHHHhcHHHHHhcCcccccccccCCCCCCCh
Q 000830 456 LR----QQIGLVNQEPA--LFAT-TIRENIL----YGKDDATMEE-ITRAAKLSEAMSFISNLPERFETQVGERGIQLSG 523 (1265)
Q Consensus 456 ~r----~~i~~v~Q~~~--lf~~-ti~~ni~----~~~~~~~~~~-~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 523 (1265)
+| +.|+||+|||. |-+- ||.+-+. ......+.+| ..+|. ++.+.+ .+|+ -+......+.+|||
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~---~~L~~V-gi~~-~~~~~~~YPhelSG 156 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAI---ELLELV-GIPD-PERRLKSYPHELSG 156 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHH---HHHHHc-CCCC-HHHHHhhCCcccCC
Confidence 43 36999999984 3222 5544443 2111101111 11111 111222 3443 23356778889999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhc-cCEEEEEeCCEEEEee
Q 000830 524 GQKQRIAISRAIVKNPSILLLDEATSALDAESENSVQEALDRVMV--GRTTVVVAHRLSTIRN-ADVIAVVQGRKIVKTG 600 (1265)
Q Consensus 524 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~~l~~G~i~~~g 600 (1265)
|||||+.||-||+.+|++||.||||+|||..++++|.+.|+++.+ |.|+|+|||++..+.. ||||+||..|+|||.|
T Consensus 157 GMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g 236 (316)
T COG0444 157 GMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVEEG 236 (316)
T ss_pred cHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeC
Confidence 999999999999999999999999999999999999999998864 8999999999999876 9999999999999999
Q ss_pred CcchhccCCchHHHHHH
Q 000830 601 SHEELISNPNSAYAALV 617 (1265)
Q Consensus 601 ~~~~l~~~~~~~~~~~~ 617 (1265)
+.+++..++...|.+..
T Consensus 237 ~~~~i~~~P~HPYT~~L 253 (316)
T COG0444 237 PVEEIFKNPKHPYTRGL 253 (316)
T ss_pred CHHHHhcCCCChHHHHH
Confidence 99999999888886543
Done!