Query         000832
Match_columns 1263
No_of_seqs    150 out of 222
Neff          3.5 
Searched_HMMs 13730
Date          Tue Mar 26 17:56:45 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/000832.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_600-604//hhsearch_scop/000832hhsearch_scop 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1b3ua_ a.118.1.2 (A:) Constan  99.8 5.2E-17 3.8E-21  133.1  24.6  188  338-538   120-308 (588)
  2 d1b3ua_ a.118.1.2 (A:) Constan  99.5 1.1E-09 8.2E-14   81.9  31.4  149  343-502   202-354 (588)
  3 d1ibrb_ a.118.1.1 (B:) Importi  98.9 2.8E-06   2E-10   58.2  23.5  307  217-533    85-429 (458)
  4 d2vglb_ a.118.1.10 (B:) Adapti  98.5 3.7E-05 2.7E-09   50.4  26.1  145  341-500    80-227 (579)
  5 d1qbkb_ a.118.1.1 (B:) Karyoph  98.4 8.5E-05 6.2E-09   47.8  22.7  123  403-530   370-497 (888)
  6 d1u6gc_ a.118.1.2 (C:) Cullin-  98.4 1.8E-05 1.3E-09   52.5  14.7   98 1138-1245 1076-1175(1207)
  7 d2vglb_ a.118.1.10 (B:) Adapti  98.3 2.7E-05   2E-09   51.3  15.1  179  347-543    49-230 (579)
  8 d1ibrb_ a.118.1.1 (B:) Importi  98.3 0.00016 1.2E-08   45.9  24.5   98  401-503   338-438 (458)
  9 d1u6gc_ a.118.1.2 (C:) Cullin-  98.0 0.00043 3.1E-08   42.9  30.6   33  473-505   432-464 (1207)
 10 d1oyza_ a.118.1.16 (A:) Hypoth  98.0 0.00056 4.1E-08   42.1  17.3  140  339-501    14-153 (276)
 11 d1qgra_ a.118.1.1 (A:) Importi  97.9 0.00078 5.7E-08   41.1  39.0  158  340-502   213-396 (876)
 12 d1lrva_ a.118.1.5 (A:) Leucine  97.9 2.4E-05 1.8E-09   51.6   7.8   92  348-495    46-137 (233)
 13 d1lrva_ a.118.1.5 (A:) Leucine  97.8 4.4E-05 3.2E-09   49.8   7.2   88  396-533   144-231 (233)
 14 d2bpta1 a.118.1.1 (A:1-861) Im  97.5  0.0032 2.3E-07   36.8  46.9   75  430-504   177-256 (861)
 15 d1te4a_ a.118.1.16 (A:) MTH187  97.4  0.0001 7.6E-09   47.2   5.3  108  353-496     1-108 (111)
 16 d2bpta1 a.118.1.1 (A:1-861) Im  97.3  0.0053 3.9E-07   35.2  28.4   94  404-502   345-441 (861)
 17 d1oyza_ a.118.1.16 (A:) Hypoth  97.1  0.0077 5.6E-07   34.2  19.6  127  394-537    23-150 (276)
 18 d1te4a_ a.118.1.16 (A:) MTH187  96.9 0.00018 1.3E-08   45.5   2.3  108  399-535     1-108 (111)
 19 d2vgla_ a.118.1.10 (A:) Adapti  96.4   0.025 1.8E-06   30.5  24.1  141  347-503    69-210 (584)
 20 d1jdha_ a.118.1.1 (A:) beta-Ca  96.2   0.031 2.3E-06   29.9  17.2  190  336-535    93-290 (529)
 21 d1q1sc_ a.118.1.1 (C:) Importi  96.2   0.032 2.3E-06   29.8  22.7   29  471-499   187-215 (434)
 22 d1xqra1 a.118.1.21 (A:87-350)   96.2   0.034 2.4E-06   29.7  13.6  145  345-500    60-214 (264)
 23 d1jdha_ a.118.1.1 (A:) beta-Ca  96.0   0.038 2.8E-06   29.3  35.9   57  443-499   237-293 (529)
 24 d1wa5b_ a.118.1.1 (B:) Karyoph  96.0   0.039 2.9E-06   29.2  17.1   29  343-371   245-273 (503)
 25 d1xm9a1 a.118.1.24 (A:244-700)  95.0   0.084 6.1E-06   26.9  13.6  146  345-500     3-171 (457)
 26 d1qgra_ a.118.1.1 (A:) Importi  94.4    0.12 8.4E-06   25.9  42.9   85  972-1060  643-729 (876)
 27 d1lsha1 a.118.4.1 (A:285-620)   92.5    0.23 1.7E-05   23.8  11.0   37  253-289   122-162 (336)
 28 d1wa5b_ a.118.1.1 (B:) Karyoph  91.9    0.28   2E-05   23.3  22.7  151  342-501   202-359 (503)
 29 d2vgla_ a.118.1.10 (A:) Adapti  87.2    0.62 4.5E-05   20.8  30.3  106  342-462   101-208 (584)
 30 d1qbkb_ a.118.1.1 (B:) Karyoph  86.9    0.64 4.7E-05   20.7  28.6   32  469-500   392-423 (888)
 31 d1q1sc_ a.118.1.1 (C:) Importi  86.1    0.71 5.1E-05   20.4  27.8  149  342-501   228-386 (434)
 32 d1xqra1 a.118.1.21 (A:87-350)   85.9    0.72 5.3E-05   20.4  17.5  187  354-567    27-224 (264)
 33 d1upka_ a.118.1.15 (A:) Mo25 p  85.8    0.73 5.3E-05   20.3   9.0  115  351-466   162-278 (330)

No 1  
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81  E-value=5.2e-17  Score=133.08  Aligned_cols=188  Identities=20%  Similarity=0.216  Sum_probs=152.0

Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf             87788864999987516986578987999758525899973113778999999999995330799737999999633587
Q 000832          338 EKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRI  417 (1263)
Q Consensus       338 demL~rLY~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrI  417 (1263)
                      .+.+.+.+.|++.++.+.+|+.+|.+|+.++..+++..++..     ..++...+   .+|++|+.|+||++|+.    .
T Consensus       120 ~~~~~~~l~p~i~~L~~~~~~~~r~~a~~ll~~~~~~~~~~~-----~~~l~~~~---~~l~~D~~~~VR~~a~~----~  187 (588)
T d1b3ua_         120 PSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAV-----KAELRQYF---RNLCSDDTPMVRRAAAS----K  187 (588)
T ss_dssp             HHHHHHTHHHHHHHHHTCSSHHHHHHHGGGHHHHTTTSCHHH-----HHHHHHHH---HHHHTCSCHHHHHHHHH----H
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHH---HHHHCCCCHHHHHHHHH----H
T ss_conf             888999999999998646314799999999999999861899-----99999999---99851699899999999----9


Q ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             88977207835899999999987326787417899899899952899846789827886643237986489999999999
Q 000832          418 LHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLL  497 (1263)
Q Consensus       418 LskfWEiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~SheiLk~LLP~LksLI~DkSWRVRyAvADLLl  497 (1263)
                      ++.+.+.++.+.+...+.+++..+.+|..+.||.++++++..++...........++|.+..+++|++|+||.++++.|.
T Consensus       188 l~~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vr~~a~~~l~~i~~~~~~~~~~~~i~~~l~~~~~D~~~~Vr~~~~~~l~  267 (588)
T d1b3ua_         188 LGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFT  267 (588)
T ss_dssp             HHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCSSHHHHHHHHHTHH
T ss_pred             HHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             99899871578779999999999744885246789998887763058889999999999997202356888899998578


Q ss_pred             HHHCCCCCCEEEECCHHHHHHHHHCC-CHHHHHHHHHHHCCC
Q ss_conf             86300297200102957999998107-549999999974002
Q 000832          498 LLRDIRTFQFNKVVGLDILLSALAND-QSQVAQKITRLLMPS  538 (1263)
Q Consensus       498 eLk~irgiKF~~VV~~D~LLaRLa~D-s~~Vak~IvkLLipS  538 (1263)
                      .+....+-+...- ..-.++..+-.| .+.|+....+.|..-
T Consensus       268 ~l~~~~~~~~~~~-~l~~~l~~ll~d~~~~vr~~a~~~l~~~  308 (588)
T d1b3ua_         268 ELQKAVGPEITKT-DLVPAFQNLMKDCEAEVRAAASHKVKEF  308 (588)
T ss_dssp             HHHHHHCHHHHHH-THHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             8887766534344-4168999987213357779999879999


No 2  
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50  E-value=1.1e-09  Score=81.87  Aligned_cols=149  Identities=17%  Similarity=0.202  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             86499998751698657898799975852589997311377899999999999533079973799999963358788977
Q 000832          343 NLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFW  422 (1263)
Q Consensus       343 rLY~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrILskfW  422 (1263)
                      ....|++..+.+..++.||..|...+..+....+++.    ....+   ...+.+++.|+.+.||.++++    .++.+.
T Consensus       202 ~~l~~~l~~l~~d~~~~vr~~a~~~l~~i~~~~~~~~----~~~~i---~~~l~~~~~D~~~~Vr~~~~~----~l~~l~  270 (588)
T d1b3ua_         202 SEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQED----LEALV---MPTLRQAAEDKSWRVRYMVAD----KFTELQ  270 (588)
T ss_dssp             HTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHHH----HHHHT---HHHHHHHHTCSSHHHHHHHHH----THHHHH
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH----HHHHH---HHHHHHHCCCCCHHHHHHHHH----HHHHHH
T ss_conf             9999999997448852467899988877630588899----99999---999997202356888899998----578888


Q ss_pred             HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             20783589999999998732678741789989989995289984----67898278866432379864899999999998
Q 000832          423 ELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLS----HEVLKVLLPRLGHLMQDNVLSVRLAMADLLLL  498 (1263)
Q Consensus       423 EiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~S----heiLk~LLP~LksLI~DkSWRVRyAvADLLle  498 (1263)
                      +.++.+.....+.+++..+..|....||..++..+..+.+....    ...+..++|.+...+.|.+|+||.+++..+..
T Consensus       271 ~~~~~~~~~~~l~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~vr~~~~~~l~~  350 (588)
T d1b3ua_         271 KAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMG  350 (588)
T ss_dssp             HHHCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTCSCHHHHHHHHTTGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             77665343444168999987213357779999879999998766554332199998888876138876789999998865


Q ss_pred             HHCC
Q ss_conf             6300
Q 000832          499 LRDI  502 (1263)
Q Consensus       499 Lk~i  502 (1263)
                      +...
T Consensus       351 ~~~~  354 (588)
T d1b3ua_         351 LSPI  354 (588)
T ss_dssp             GHHH
T ss_pred             HHHC
T ss_conf             5430


No 3  
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.90  E-value=2.8e-06  Score=58.19  Aligned_cols=307  Identities=13%  Similarity=0.092  Sum_probs=143.5

Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH----C--CCHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHCC
Q ss_conf             998889999999831263102745126899986----0--777899999999984203--68499999985788765336
Q 000832          217 NSIEDLKLLLIRCVISPLYLKTEDGRKFLAFLF----G--LSKPMLKDVLAMIKSQIS--FERKSMLEAYGDVLYRAWKG  288 (1263)
Q Consensus       217 eS~~slk~LLLrc~~sP~FlkseEGrkFLA~lF----g--l~~~li~~ih~tIKnQLp--~~~kS~le~YGEIyFrAWK~  288 (1263)
                      +.-..++..+++++.++.-.+..=. ..++.++    +  .-+.++..+...+.+.-.  ..+...+..++.++...=..
T Consensus        85 ~~~~~i~~~ll~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~l~~~~~~~~~~  163 (458)
T d1ibrb_          85 NARREVKNYVLQTLGTETYRPSSAS-QCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPE  163 (458)
T ss_dssp             HHHHHHHHHHHHHTTCCCSSSCSHH-HHHHHHHHHHGGGTCCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGG
T ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHH-HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             9999999999861479828999999-999999998678012751057899998820321778888998888987631410


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf             6300599998869999998833059-978899999998667424788435877888649999875169865789879997
Q 000832          289 VEEGFREDVESGFLQVLIEGAIHAS-SRAFAASIRRVLGGFVNQRTTPGVEKMLFNLTEPVMFRSLQAANSNVRQNALHL  367 (1263)
Q Consensus       289 A~gd~~eeIE~~cIQdLm~~AIha~-s~~lAakiR~VLs~FhsqK~~kgVdemL~rLY~PILwRLLka~NftVR~SAa~L  367 (1263)
                      ........    .++.+++...... +..+....-..+..+........-.........+++..+++.+++.+|..++..
T Consensus       164 ~~~~~~~~----il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  239 (458)
T d1ibrb_         164 QLQDKSNE----ILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQN  239 (458)
T ss_dssp             GTGGGHHH----HHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred             HHHHHHHH----HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             00233889----99999998615456799999999999999886132456677777767668877259989999999999


Q ss_pred             HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH----------------HHCCHHH--
Q ss_conf             5852589997311377899999999999533079973799999963358788977----------------2078358--
Q 000832          368 LLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFW----------------ELIPSAT--  429 (1263)
Q Consensus       368 F~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrILskfW----------------EiIP~~~--  429 (1263)
                      +......... .........+   +..+.....++.+.||..|+..++.+....-                ..++...  
T Consensus       240 l~~i~~~~~~-~~~~~l~~~~---~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (458)
T d1ibrb_         240 LVKIMSLYYQ-YMETYMGPAL---FAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAK  315 (458)
T ss_dssp             HHHHHHHCGG-GCTTTTTTTH---HHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHH
T ss_pred             HHHHHHHHHH-HHHHHHHHHH---HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999987199-9998887789---99999984354599999999999998998899998503678764189999999999


Q ss_pred             -HHHHHHHHH-HHHC------CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             -999999999-8732------67874178998998999528998467898278866432379864899999999998630
Q 000832          430 -ITKIITKIF-DDNS------HDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRD  501 (1263)
Q Consensus       430 -I~slL~kIi-~~LA------kDsQDSVRlaVVeGLiaLLkn~~SheiLk~LLP~LksLI~DkSWRVRyAvADLLleLk~  501 (1263)
                       ....+.+.+ ..+.      .|+..+||.++...+..+...... +.+..++|.+...++|.+|+||.+++..|..+.+
T Consensus       316 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~-~~~~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~  394 (458)
T d1ibrb_         316 GALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCED-DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILE  394 (458)
T ss_dssp             HHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTT-THHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             889987266776400010210112233999999999999875517-5566789999998569998999999999999997


Q ss_pred             CCC-CCEEEECC--HHHHHHHHHCCCHHHHHHHHH
Q ss_conf             029-72001029--579999981075499999999
Q 000832          502 IRT-FQFNKVVG--LDILLSALANDQSQVAQKITR  533 (1263)
Q Consensus       502 irg-iKF~~VV~--~D~LLaRLa~Ds~~Vak~Ivk  533 (1263)
                      ... ..+...++  +..++..+...+++||.....
T Consensus       395 ~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~  429 (458)
T d1ibrb_         395 GPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAW  429 (458)
T ss_dssp             SSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHH
T ss_pred             HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             54776789889999999998848998999999999


No 4  
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.54  E-value=3.7e-05  Score=50.36  Aligned_cols=145  Identities=12%  Similarity=0.044  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             88864999987516986578987999758525899973113778999999999995330799737999999633587889
Q 000832          341 LFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHL  420 (1263)
Q Consensus       341 L~rLY~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrILsk  420 (1263)
                      +..+..+.+.+.++.+|..+|..|...+...   ..++.     -..+   ...+.+++.|+.|.||++|+..    +.+
T Consensus        80 ~~~l~intl~kDl~d~n~~iR~lALr~L~~i---~~~~i-----~~~l---~~~l~~~L~D~~p~VRk~Aa~~----l~k  144 (579)
T d2vglb_          80 MAIMAVNSFVKDCEDPNPLIRALAVRTMGCI---RVDKI-----TEYL---CEPLRKCLKDEDPYVRKTAAVC----VAK  144 (579)
T ss_dssp             HHHTTHHHHGGGSSSSSHHHHHHHHHHHHTC---CSGGG-----HHHH---HHHHHHHSSCSCHHHHHHHHHH----HHH
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC---CCHHH-----HHHH---HHHHHHHHHCCCHHHHHHHHHH----HHH
T ss_conf             9999999999886999999999999998748---98889-----9999---9999998705768999999999----998


Q ss_pred             HHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             7720783589999999998732678741789989989995289984---6789827886643237986489999999999
Q 000832          421 FWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLS---HEVLKVLLPRLGHLMQDNVLSVRLAMADLLL  497 (1263)
Q Consensus       421 fWEiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~S---heiLk~LLP~LksLI~DkSWRVRyAvADLLl  497 (1263)
                      ++...|.......+.+.+..+..|..+.||..++..+..+.+....   -......++.+...+.|.++.++..+.+.|.
T Consensus       145 l~~~~p~~~~~~~~~~~L~~lL~D~n~~V~~~Al~~L~~I~~~~~~~~~~~l~~~~i~~Ll~~l~~~~~~~q~~il~~L~  224 (579)
T d2vglb_         145 LHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS  224 (579)
T ss_dssp             HHHSSCCCHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred             HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             86328144456657899999873999289999999999998858510067851999999982657898789999999999


Q ss_pred             HHH
Q ss_conf             863
Q 000832          498 LLR  500 (1263)
Q Consensus       498 eLk  500 (1263)
                      .+.
T Consensus       225 ~~~  227 (579)
T d2vglb_         225 NYN  227 (579)
T ss_dssp             TSC
T ss_pred             HHC
T ss_conf             847


No 5  
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39  E-value=8.5e-05  Score=47.81  Aligned_cols=123  Identities=13%  Similarity=0.046  Sum_probs=74.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC--HHHHHHHHHHHHHH
Q ss_conf             7379999996335878897720783589999999998732678741789989989995289984--67898278866432
Q 000832          403 CPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLS--HEVLKVLLPRLGHL  480 (1263)
Q Consensus       403 tPMVRRAAA~gVcrILskfWEiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~S--heiLk~LLP~LksL  480 (1263)
                      ...+|++|+.    .|..+....+.... ..+.+++.....+....+|.+++.++.++++....  .+.+..++|.+...
T Consensus       370 ~~~~r~~a~~----~L~~l~~~~~~~il-~~~l~~l~~~l~s~~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~  444 (888)
T d1qbkb_         370 DWNLRKCSAA----ALDVLANVYRDELL-PHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQC  444 (888)
T ss_dssp             CCSSHHHHHH----HSTTTTTTCCSSSH-HHHHHHHHHTTTSSSHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHH----HHHHHHHHHHHHHH-HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             3369999999----87667651299999-999999887512205689999999864355557877421203556799984


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCCEEE--E-CCHHHHHHHHHCCCHHHHHH
Q ss_conf             37986489999999999863002972001--0-29579999981075499999
Q 000832          481 MQDNVLSVRLAMADLLLLLRDIRTFQFNK--V-VGLDILLSALANDQSQVAQK  530 (1263)
Q Consensus       481 I~DkSWRVRyAvADLLleLk~irgiKF~~--V-V~~D~LLaRLa~Ds~~Vak~  530 (1263)
                      +.|+++.||.+++..+.++.........+  . --+..++.++.+.+++|+..
T Consensus       445 l~d~~~~Vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~l~d~~~~V~~~  497 (888)
T d1qbkb_         445 LSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEA  497 (888)
T ss_dssp             TTSSCHHHHHHHHHHHHHTHHHHHSSCHHHHTTTHHHHHHHHHSSSCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf             26998999999999999999986654156554555899998842898789998


No 6  
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.35  E-value=1.8e-05  Score=52.51  Aligned_cols=98  Identities=18%  Similarity=0.189  Sum_probs=63.7

Q ss_pred             HHHHHHH-HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHH
Q ss_conf             2579999-999987169984101367785310012022343012525688767762178853234210000246731588
Q 000832         1138 PEFKKFM-ELIIPLLKGKPCILDAVGVVFLTGSVVGLERKDFGLFLGLVHFVCVKLIGTDNREWNGLDAMLVSLPDIYPR 1216 (1263)
Q Consensus      1138 ~~~~k~~-~m~~~llk~~~~ild~v~~~~l~~~~~~l~~~d~~~~~gl~~fvc~kl~g~~~~~~~~l~~~~~sl~~~~~~ 1216 (1263)
                      ..-||.+ |.|..||-....-+|-.  -|+.....||+- +|++ --|.+-...||+--.-      +.+..-|..+.+.
T Consensus      1076 l~~rk~a~e~~~~~l~~~~~~~~~~--~~~~~~~~gl~d-~~di-~~~~~~~l~~l~~~~~------~~~~~~l~~~~~~ 1145 (1207)
T d1u6gc_        1076 LDIRKAAFECMYTLLDSCLDRLDIF--EFLNHVEDGLKD-HYDI-KMLTFLMLVRLSTLCP------SAVLQRLDRLVEP 1145 (1207)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSSCHH--HHHHHHHHTTSS-CHHH-HHHHHHHHHHHHHSCC------HHHHTTTTTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHCCCC-HHHH-HHHHHHHHHHHHHHCC------HHHHHHHHHHHHH
T ss_conf             8999999999999998755025899--999999853565-4889-9999999999998693------8789999999999


Q ss_pred             HHHHHHHHH-CHHHHHHHHHHHHHHHHHHH
Q ss_conf             889877742-05788968856786666785
Q 000832         1217 IEKEIEEQS-QEGERQKLLDAKVLLEPVWM 1245 (1263)
Q Consensus      1217 i~~~~~~~~-~~~~~~~l~~a~~l~~~~~~ 1245 (1263)
                      ..+.+.-.. +.-..|.+|.+.++++++.-
T Consensus      1146 ~~~~~~~~~~~~~~~q~~e~~~e~~~~~~~ 1175 (1207)
T d1u6gc_        1146 LRATCTTKVKANSVKQEFEKQDELKRSAMR 1175 (1207)
T ss_dssp             HHHHHHCCCCTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             999970166735043016779999999999


No 7  
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.32  E-value=2.7e-05  Score=51.26  Aligned_cols=179  Identities=18%  Similarity=0.119  Sum_probs=94.3

Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99987516986578987999758525899973113778999999999995330799737999999633587889772078
Q 000832          347 PVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIP  426 (1263)
Q Consensus       347 PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrILskfWEiIP  426 (1263)
                      |-+-++.+..++..|.=+ .|+...|...+|+.        +.-....+.+-+.|+.|.||..|...    ++   .+..
T Consensus        49 ~~vi~~~~s~d~~~Kkl~-yl~l~~~~~~~~d~--------~~l~intl~kDl~d~n~~iR~lALr~----L~---~i~~  112 (579)
T d2vglb_          49 PDVVNCMQTDNLELKKLV-YLYLMNYAKSQPDM--------AIMAVNSFVKDCEDPNPLIRALAVRT----MG---CIRV  112 (579)
T ss_dssp             HHHHHTTSSSCHHHHHHH-HHHHHHHHHHSHHH--------HHTTHHHHGGGSSSSSHHHHHHHHHH----HH---TCCS
T ss_pred             HHHHHHHCCCCHHHHHHH-HHHHHHHCCCCCCH--------HHHHHHHHHHHCCCCCHHHHHHHHHH----HH---CCCC
T ss_conf             999978189999999999-99999967678529--------99999999988699999999999999----87---4898


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             35899999999987326787417899899899952899846789827886643237986489999999999863002972
Q 000832          427 SATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIRTFQ  506 (1263)
Q Consensus       427 ~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~SheiLk~LLP~LksLI~DkSWRVRyAvADLLleLk~irgiK  506 (1263)
                      ++ +.+.+.+.+.++..|..+.||-.++.++..+.+.....-....++|.+..++.|.++.||.+++..|.++.......
T Consensus       113 ~~-i~~~l~~~l~~~L~D~~p~VRk~Aa~~l~kl~~~~p~~~~~~~~~~~L~~lL~D~n~~V~~~Al~~L~~I~~~~~~~  191 (579)
T d2vglb_         113 DK-ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS  191 (579)
T ss_dssp             GG-GHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCSC
T ss_pred             HH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             88-99999999999870576899999999999886328144456657899999873999289999999999998858510


Q ss_pred             -EEEEC--CHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf             -00102--95799999810754999999997400279999
Q 000832          507 -FNKVV--GLDILLSALANDQSQVAQKITRLLMPSYFPLK  543 (1263)
Q Consensus       507 -F~~VV--~~D~LLaRLa~Ds~~Vak~IvkLLipSfFP~k  543 (1263)
                       +.++.  ....++..+...++-+...+.+.| ..|-|..
T Consensus       192 ~~~~l~~~~i~~Ll~~l~~~~~~~q~~il~~L-~~~~~~~  230 (579)
T d2vglb_         192 NLLDLNPQNINKLLTALNECTEWGQIFILDCL-SNYNPKD  230 (579)
T ss_dssp             CSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH-HTSCCCS
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH-HHHCCCC
T ss_conf             06785199999998265789878999999999-9847787


No 8  
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.27  E-value=0.00016  Score=45.87  Aligned_cols=98  Identities=18%  Similarity=0.101  Sum_probs=54.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHH
Q ss_conf             997379999996335878897720783589999999998732678741789989989995289984---67898278866
Q 000832          401 DDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLS---HEVLKVLLPRL  477 (1263)
Q Consensus       401 DDtPMVRRAAA~gVcrILskfWEiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~S---heiLk~LLP~L  477 (1263)
                      |+...+|.+|..    .+..+....+.+.. ..+.+++....+|+...||.+++.++..+++....   .+.+..++|.+
T Consensus       338 ~~~~~~~~~a~~----~l~~l~~~~~~~~~-~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~l~~i~~~l  412 (458)
T d1ibrb_         338 DDDWNPCKAAGV----CLMLLATCCEDDIV-PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTL  412 (458)
T ss_dssp             TTCCSHHHHHHH----HHHHHHHHTTTTHH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHHHHH
T ss_pred             CCCCCHHHHHHH----HHHHHHHHCCHHHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             122339999999----99999875517556-6789999998569998999999999999997547767898899999999


Q ss_pred             HHHCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             43237986489999999999863002
Q 000832          478 GHLMQDNVLSVRLAMADLLLLLRDIR  503 (1263)
Q Consensus       478 ksLI~DkSWRVRyAvADLLleLk~ir  503 (1263)
                      ..+++|++++||++++..+.++.+..
T Consensus       413 ~~~l~d~~~~VR~~a~~~l~~i~~~~  438 (458)
T d1ibrb_         413 IELMKDPSVVVRDTAAWTVGRICELL  438 (458)
T ss_dssp             HHGGGCSCHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             98848998999999999999999972


No 9  
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.05  E-value=0.00043  Score=42.88  Aligned_cols=33  Identities=15%  Similarity=0.209  Sum_probs=19.0

Q ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             788664323798648999999999986300297
Q 000832          473 LLPRLGHLMQDNVLSVRLAMADLLLLLRDIRTF  505 (1263)
Q Consensus       473 LLP~LksLI~DkSWRVRyAvADLLleLk~irgi  505 (1263)
                      +++.+...+.|++.+||.+++..+..+......
T Consensus       432 i~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~~~  464 (1207)
T d1u6gc_         432 IVKALHKQMKEKSVKTRQCCFNMLTELVNVLPG  464 (1207)
T ss_dssp             HHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCH
T ss_conf             999999986488656788899999999997225


No 10 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=97.98  E-value=0.00056  Score=42.08  Aligned_cols=140  Identities=15%  Similarity=-0.004  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             77888649999875169865789879997585258999731137789999999999953307997379999996335878
Q 000832          339 KMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRIL  418 (1263)
Q Consensus       339 emL~rLY~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrIL  418 (1263)
                      +.-.+.-...|.++++.++..||..|+..+...-    +        ...   ...+.++++|+.|.||..|+..    |
T Consensus        14 ~~~~~~~~~~L~~~L~d~~~~vR~~A~~~L~~~~----~--------~~~---~~~l~~~l~d~~~~vr~~a~~a----L   74 (276)
T d1oyza_          14 NQCKKLNDDELFRLLDDHNSLKRISSARVLQLRG----G--------QDA---VRLAIEFCSDKNYIRRDIGAFI----L   74 (276)
T ss_dssp             HHHHTSCHHHHHHHTTCSSHHHHHHHHHHHHHHC----C--------HHH---HHHHHHHHTCSSHHHHHHHHHH----H
T ss_pred             CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHC----C--------HHH---HHHHHHHHCCCCHHHHHHHHHH----H
T ss_conf             6220279999998846999999999999998618----8--------739---9999999809998999999999----9


Q ss_pred             HHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             89772078358999999999873267874178998998999528998467898278866432379864899999999998
Q 000832          419 HLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLL  498 (1263)
Q Consensus       419 skfWEiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~SheiLk~LLP~LksLI~DkSWRVRyAvADLLle  498 (1263)
                      +.+.....  .....+..++..+.+|....||..++..+..+....  ......+++.+....+|..+.||.+++..+..
T Consensus        75 ~~l~~~~~--~~~~~~~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~--~~~~~~~~~~l~~~~~d~~~~vr~~a~~~l~~  150 (276)
T d1oyza_          75 GQIKICKK--CEDNVFNILNNMALNDKSACVRATAIESTAQRCKKN--PIYSPKIVEQSQITAFDKSTNVRRATAFAISV  150 (276)
T ss_dssp             HHSCCCTT--THHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHC--GGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHT
T ss_pred             HHHCCCCC--CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             87202212--120229999999866997668999999999870246--21018999999998647204899999998741


Q ss_pred             HHC
Q ss_conf             630
Q 000832          499 LRD  501 (1263)
Q Consensus       499 Lk~  501 (1263)
                      +.+
T Consensus       151 ~~~  153 (276)
T d1oyza_         151 IND  153 (276)
T ss_dssp             C--
T ss_pred             CCH
T ss_conf             023


No 11 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.90  E-value=0.00078  Score=41.10  Aligned_cols=158  Identities=13%  Similarity=0.070  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             78886499998751698657898799975852589997311377899999999999533079973799999963358788
Q 000832          340 MLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILH  419 (1263)
Q Consensus       340 mL~rLY~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrILs  419 (1263)
                      ....+..+++....+.++..+|.+|+..+...+..... .........   .+..+.....++.+.|+..|......+..
T Consensus       213 ~~~~~i~~~l~~~~~~~~~~v~~~~~~~l~~l~~~~~~-~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~i~~  288 (876)
T d1qgra_         213 SERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQ-YMETYMGPA---LFAITIEAMKSDIDEVALQGIEFWSNVCD  288 (876)
T ss_dssp             HHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGG-GCHHHHTTT---HHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH---HHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             89999999999982599889999999999999999699-988878879---99999987345338999999999999888


Q ss_pred             HHHHH----------------CCHHH---HHHHHHHHHHH-HCC------CCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             97720----------------78358---99999999987-326------787417899899899952899846789827
Q 000832          420 LFWEL----------------IPSAT---ITKIITKIFDD-NSH------DLCNEVRLATVNGIIYLLGNPLSHEVLKVL  473 (1263)
Q Consensus       420 kfWEi----------------IP~~~---I~slL~kIi~~-LAk------DsQDSVRlaVVeGLiaLLkn~~SheiLk~L  473 (1263)
                      ...+.                .....   ....+.+++.. +..      |+..++|.++.+.+..+..... ...+..+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~-~~~~~~~  367 (876)
T d1qgra_         289 EEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE-DDIVPHV  367 (876)
T ss_dssp             HHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHG-GGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_conf             899999873378875316999999999988998877657888743002354331399999999999998736-6653556


Q ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             88664323798648999999999986300
Q 000832          474 LPRLGHLMQDNVLSVRLAMADLLLLLRDI  502 (1263)
Q Consensus       474 LP~LksLI~DkSWRVRyAvADLLleLk~i  502 (1263)
                      +|.+...+.+..|++|.+++..+..+...
T Consensus       368 ~~~i~~~l~~~~~~~r~~~~~~l~~~~~~  396 (876)
T d1qgra_         368 LPFIKEHIKNPDWRYRDAAVMAFGCILEG  396 (876)
T ss_dssp             HHHHHHHTTCSSHHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             78999860251378889999988766643


No 12 
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=97.90  E-value=2.4e-05  Score=51.60  Aligned_cols=92  Identities=21%  Similarity=0.175  Sum_probs=48.7

Q ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf             99875169865789879997585258999731137789999999999953307997379999996335878897720783
Q 000832          348 VMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPS  427 (1263)
Q Consensus       348 ILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrILskfWEiIP~  427 (1263)
                      +--.++..++|.+|.-|+.       ..+.               +.|..|+.|+.|.||++|+..    |       |.
T Consensus        46 l~~~~l~~p~~e~Ra~Aa~-------~a~~---------------~~L~~Ll~D~d~~VR~~AA~~----L-------p~   92 (233)
T d1lrva_          46 LAVQYLADPFWERRAIAVR-------YSPV---------------EALTPLIRDSDEVVRRAVAYR----L-------PR   92 (233)
T ss_dssp             GGGGGTTCSSHHHHHHHHT-------TSCG---------------GGGGGGTTCSSHHHHHHHHTT----S-------CS
T ss_pred             HHHHHHCCCCHHHHHHHHH-------CCCH---------------HHHHHHHCCCCHHHHHHHHHH----C-------CH
T ss_conf             9998854996999999870-------1999---------------999988269898999999997----4-------89


Q ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             58999999999873267874178998998999528998467898278866432379864899999999
Q 000832          428 ATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADL  495 (1263)
Q Consensus       428 ~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~SheiLk~LLP~LksLI~DkSWRVRyAvADL  495 (1263)
                              ..+..|.+|....||..+...+.               .+.+..+++|++|.||.+++..
T Consensus        93 --------~~L~~L~~D~d~~VR~~aa~~l~---------------~~~L~~Ll~D~d~~VR~~aa~~  137 (233)
T d1lrva_          93 --------EQLSALMFDEDREVRITVADRLP---------------LEQLEQMAADRDYLVRAYVVQR  137 (233)
T ss_dssp             --------GGGGGTTTCSCHHHHHHHHHHSC---------------TGGGGGGTTCSSHHHHHHHHHH
T ss_pred             --------HHHHHHHCCCCHHHHHHHHHCCC---------------HHHHHHHHCCCCHHHHHHHHHC
T ss_conf             --------99999844997468998874268---------------8999998559987899999861


No 13 
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=97.76  E-value=4.4e-05  Score=49.84  Aligned_cols=88  Identities=22%  Similarity=0.211  Sum_probs=54.7

Q ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             53307997379999996335878897720783589999999998732678741789989989995289984678982788
Q 000832          396 EKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLP  475 (1263)
Q Consensus       396 ~~LL~DDtPMVRRAAA~gVcrILskfWEiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~SheiLk~LLP  475 (1263)
                      ..|+.|+.|.||.+++..           ++.        +.+..+++|....||..+.+.+.               -|
T Consensus       144 ~~L~~D~d~~VR~~aA~~-----------~~~--------~~L~~l~~D~d~~VR~~aa~~L~---------------~~  189 (233)
T d1lrva_         144 FRFMRDEDRQVRKLVAKR-----------LPE--------ESLGLMTQDPEPEVRRIVASRLR---------------GD  189 (233)
T ss_dssp             GGTTTCSCHHHHHHHHHH-----------SCG--------GGGGGSTTCSSHHHHHHHHHHCC---------------GG
T ss_pred             HHHHCCCCHHHHHHHHHH-----------CCH--------HHHHHHCCCCCHHHHHHHHHHCC---------------CH
T ss_conf             988348978999999984-----------599--------99998705998899999998458---------------49


Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             6643237986489999999999863002972001029579999981075499999999
Q 000832          476 RLGHLMQDNVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITR  533 (1263)
Q Consensus       476 ~LksLI~DkSWRVRyAvADLLleLk~irgiKF~~VV~~D~LLaRLa~Ds~~Vak~Ivk  533 (1263)
                      .+..+++|++|+||++++..+                ...++..|.++.+.|++.+.+
T Consensus       190 ~L~~l~~D~d~~VR~aaae~~----------------~~~ll~~L~D~d~~VR~aA~~  231 (233)
T d1lrva_         190 DLLELLHDPDWTVRLAAVEHA----------------SLEALRELDEPDPEVRLAIAG  231 (233)
T ss_dssp             GGGGGGGCSSHHHHHHHHHHS----------------CHHHHHHCCCCCHHHHHHHHC
T ss_pred             HHHHHHHCCCHHHHHHHHHHC----------------CHHHHHHHCCCCHHHHHHHHH
T ss_conf             999987399889999999706----------------399999867999999999997


No 14 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.47  E-value=0.0032  Score=36.78  Aligned_cols=75  Identities=17%  Similarity=0.085  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHCCCCC----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             9999999998732678-741789989989995289984----67898278866432379864899999999998630029
Q 000832          430 ITKIITKIFDDNSHDL-CNEVRLATVNGIIYLLGNPLS----HEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIRT  504 (1263)
Q Consensus       430 I~slL~kIi~~LAkDs-QDSVRlaVVeGLiaLLkn~~S----heiLk~LLP~LksLI~DkSWRVRyAvADLLleLk~irg  504 (1263)
                      +..++..+++.+..++ +..||..++.++..++.....    ......+++.+...++|..++||..+.+.+..+.+...
T Consensus       177 ~~~il~~i~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~  256 (861)
T d2bpta1         177 SNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYY  256 (861)
T ss_dssp             HHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999998733347899999999999999998767677666544777767988569989999999999999988778


No 15 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=97.42  E-value=0.0001  Score=47.17  Aligned_cols=108  Identities=18%  Similarity=0.123  Sum_probs=70.3

Q ss_pred             HCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             16986578987999758525899973113778999999999995330799737999999633587889772078358999
Q 000832          353 LQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITK  432 (1263)
Q Consensus       353 Lka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrILskfWEiIP~~~I~s  432 (1263)
                      ++.+|+.||..|...+..    .+++.            +..|..++.|+.|.||..|+.    .|+.+.    ....  
T Consensus         1 L~D~~~~VR~~A~~aL~~----~~~~~------------~~~L~~~l~d~~~~vR~~a~~----~L~~~~----~~~~--   54 (111)
T d1te4a_           1 MADENKWVRRDVSTALSR----MGDEA------------FEPLLESLSNEDWRIRGAAAW----IIGNFQ----DERA--   54 (111)
T ss_dssp             CCSSCCCSSSSCCSSTTS----CSSTT------------HHHHHHGGGCSCHHHHHHHHH----HHGGGC----SHHH--
T ss_pred             CCCCCHHHHHHHHHHHHH----HCHHH------------HHHHHHHHCCCCHHHHHHHHH----HHHHCC----HHHH--
T ss_conf             989599999999999987----38789------------999999974998789999999----987610----1232--


Q ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             9999998732678741789989989995289984678982788664323798648999999999
Q 000832          433 IITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLL  496 (1263)
Q Consensus       433 lL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~SheiLk~LLP~LksLI~DkSWRVRyAvADLL  496 (1263)
                       + +.+..+..|....||..++.++..+-+        ....|.+..+++|+++.||.+++.-|
T Consensus        55 -~-~~L~~~l~d~~~~VR~~a~~aL~~i~~--------~~~~~~L~~ll~d~~~~vr~~A~~aL  108 (111)
T d1te4a_          55 -V-EPLIKLLEDDSGFVRSGAARSLEQIGG--------ERVRAAMEKLAETGTGFARKVAVNYL  108 (111)
T ss_dssp             -H-HHHHHHHHHCCTHHHHHHHHHHHHHCS--------HHHHHHHHHHTTSCCTHHHHHHHHHG
T ss_pred             -H-HHHHHHHCCCHHHHHHHHHHHHHHHCC--------CCHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             -7-998733023033799999999998676--------11499999988299899999999998


No 16 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.28  E-value=0.0053  Score=35.25  Aligned_cols=94  Identities=20%  Similarity=0.146  Sum_probs=36.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHH
Q ss_conf             379999996335878897720783589999999998732678741789989989995289984---67898278866432
Q 000832          404 PDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLS---HEVLKVLLPRLGHL  480 (1263)
Q Consensus       404 PMVRRAAA~gVcrILskfWEiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~S---heiLk~LLP~LksL  480 (1263)
                      ..+|.++..    .+..++...+..... .+.+.+.....+....+|.+++..+..+.+....   .+.+..++|.+...
T Consensus       345 ~~~~~~~~~----~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~l~~~l~~l~~~  419 (861)
T d2bpta1         345 WNVSMSAGA----CLQLFAQNCGNHILE-PVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNL  419 (861)
T ss_dssp             CHHHHHHHH----HHHHHHHHHGGGGHH-HHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHH----HHHHHHHHCCHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             778888999----988877603314665-411113542001777888889989999884102666888789999999887


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             3798648999999999986300
Q 000832          481 MQDNVLSVRLAMADLLLLLRDI  502 (1263)
Q Consensus       481 I~DkSWRVRyAvADLLleLk~i  502 (1263)
                      +.|.+++||.+++..+..+.+.
T Consensus       420 l~d~~~~vr~~a~~~l~~l~~~  441 (861)
T d2bpta1         420 MNDQSLQVKETTAWCIGRIADS  441 (861)
T ss_dssp             GGCSCHHHHHHHHHHHHHHHHH
T ss_pred             HCCCCHHHHHHHHHHHHHHHHH
T ss_conf             3376205666898899999998


No 17 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=97.12  E-value=0.0077  Score=34.16  Aligned_cols=127  Identities=12%  Similarity=-0.090  Sum_probs=76.5

Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             99533079973799999963358788977207835899999999987326787417899899899952899846789827
Q 000832          394 LLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVL  473 (1263)
Q Consensus       394 ~L~~LL~DDtPMVRRAAA~gVcrILskfWEiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~SheiLk~L  473 (1263)
                      .|.++|.|+.|+||.+|+..    |+.+-    .+    ...+++..+.+|....||..++.++..+.......+.... 
T Consensus        23 ~L~~~L~d~~~~vR~~A~~~----L~~~~----~~----~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~~~~~~~-   89 (276)
T d1oyza_          23 ELFRLLDDHNSLKRISSARV----LQLRG----GQ----DAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFN-   89 (276)
T ss_dssp             HHHHHTTCSSHHHHHHHHHH----HHHHC----CH----HHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTTHHHHHH-
T ss_pred             HHHHHHCCCCHHHHHHHHHH----HHHHC----CH----HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH-
T ss_conf             99988469999999999999----98618----87----3999999998099989999999999872022121202299-


Q ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCC-CHHHHHHHHHHHCC
Q ss_conf             88664323798648999999999986300297200102957999998107-54999999997400
Q 000832          474 LPRLGHLMQDNVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALAND-QSQVAQKITRLLMP  537 (1263)
Q Consensus       474 LP~LksLI~DkSWRVRyAvADLLleLk~irgiKF~~VV~~D~LLaRLa~D-s~~Vak~IvkLLip  537 (1263)
                       ..+..+++|.+|.||.+++..+..+........-   ..-..+.....| .+.|+..++..+..
T Consensus        90 -~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~~---~~~~~l~~~~~d~~~~vr~~a~~~l~~  150 (276)
T d1oyza_          90 -ILNNMALNDKSACVRATAIESTAQRCKKNPIYSP---KIVEQSQITAFDKSTNVRRATAFAISV  150 (276)
T ss_dssp             -HHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGGHH---HHHHHHHHHTTCSCHHHHHHHHHHHHT
T ss_pred             -HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH---HHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             -9999986699766899999999987024621018---999999998647204899999998741


No 18 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=96.92  E-value=0.00018  Score=45.50  Aligned_cols=108  Identities=15%  Similarity=0.042  Sum_probs=56.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             07997379999996335878897720783589999999998732678741789989989995289984678982788664
Q 000832          399 LTDDCPDVRVVAVEGCCRILHLFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLG  478 (1263)
Q Consensus       399 L~DDtPMVRRAAA~gVcrILskfWEiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~SheiLk~LLP~Lk  478 (1263)
                      |.|+.|.||++|+..    |+.    +.++.+    .+++.. ..|....||..++.++..+..        ...+|.+.
T Consensus         1 L~D~~~~VR~~A~~a----L~~----~~~~~~----~~L~~~-l~d~~~~vR~~a~~~L~~~~~--------~~~~~~L~   59 (111)
T d1te4a_           1 MADENKWVRRDVSTA----LSR----MGDEAF----EPLLES-LSNEDWRIRGAAAWIIGNFQD--------ERAVEPLI   59 (111)
T ss_dssp             CCSSCCCSSSSCCSS----TTS----CSSTTH----HHHHHG-GGCSCHHHHHHHHHHHGGGCS--------HHHHHHHH
T ss_pred             CCCCCHHHHHHHHHH----HHH----HCHHHH----HHHHHH-HCCCCHHHHHHHHHHHHHCCH--------HHHHHHHH
T ss_conf             989599999999999----987----387899----999999-749987899999999876101--------23279987


Q ss_pred             HHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             323798648999999999986300297200102957999998107549999999974
Q 000832          479 HLMQDNVLSVRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRLL  535 (1263)
Q Consensus       479 sLI~DkSWRVRyAvADLLleLk~irgiKF~~VV~~D~LLaRLa~Ds~~Vak~IvkLL  535 (1263)
                      .+++|++|.||.+++.-|.++....        ..+.|..-+..+++.|++...+.|
T Consensus        60 ~~l~d~~~~VR~~a~~aL~~i~~~~--------~~~~L~~ll~d~~~~vr~~A~~aL  108 (111)
T d1te4a_          60 KLLEDDSGFVRSGAARSLEQIGGER--------VRAAMEKLAETGTGFARKVAVNYL  108 (111)
T ss_dssp             HHHHHCCTHHHHHHHHHHHHHCSHH--------HHHHHHHHTTSCCTHHHHHHHHHG
T ss_pred             HHHCCCHHHHHHHHHHHHHHHCCCC--------HHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             3302303379999999999867611--------499999988299899999999998


No 19 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.39  E-value=0.025  Score=30.53  Aligned_cols=141  Identities=14%  Similarity=0.089  Sum_probs=84.6

Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99987516986578987999758525899973113778999999999995330799737999999633587889772078
Q 000832          347 PVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLFWELIP  426 (1263)
Q Consensus       347 PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrILskfWEiIP  426 (1263)
                      +-+-++.+..++..|.- ..|+...|...+|+.     --..   ...+.+-|.|+.|.||..|...+|.+       ..
T Consensus        69 ~~vi~l~ss~~~~~Kr~-gYL~l~~~~~~~~el-----~~L~---iNtl~KDL~s~n~~ir~lALr~L~~i-------~~  132 (584)
T d2vgla_          69 MEAVNLLSSNRYTEKQI-GYLFISVLVNSNSEL-----IRLI---NNAIKNDLASRNPTFMGLALHCIANV-------GS  132 (584)
T ss_dssp             HHHHHGGGCSCHHHHHH-HHHHHHHSCCCCHHH-----HHHH---HHHHHHHHHSCCHHHHHHHHHHHHHH-------CC
T ss_pred             HHHHHHHCCCCHHHHHH-HHHHHHHHCCCCCHH-----HHHH---HHHHHHHCCCCCHHHHHHHHHHHHCC-------CC
T ss_conf             99999948997898999-999999985899469-----9999---99999886999989999999998737-------99


Q ss_pred             HHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             358999999999873-26787417899899899952899846789827886643237986489999999999863002
Q 000832          427 SATITKIITKIFDDN-SHDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIR  503 (1263)
Q Consensus       427 ~~~I~slL~kIi~~L-AkDsQDSVRlaVVeGLiaLLkn~~SheiLk~LLP~LksLI~DkSWRVRyAvADLLleLk~ir  503 (1263)
                      ++....++..+.+.+ +.|..+.||-.++.++..+............++|.+..++.|++..|+.+++..+.++....
T Consensus       133 ~~i~~~l~~~V~k~l~~~d~~p~VRk~A~l~l~ki~~~~pd~~~~~~~~~~L~~lL~D~d~~V~~aAl~ll~eI~~~~  210 (584)
T d2vgla_         133 REMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKN  210 (584)
T ss_dssp             HHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGGCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             888887789998750358986899999999999999869665333027999999816998248999999999999869


No 20 
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.22  E-value=0.031  Score=29.91  Aligned_cols=190  Identities=14%  Similarity=0.038  Sum_probs=112.0

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH--HHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             35877888649999875169865789879997585258999731137789999--9999999533079973799999963
Q 000832          336 GVEKMLFNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLF--DKQFFLLEKLLTDDCPDVRVVAVEG  413 (1263)
Q Consensus       336 gVdemL~rLY~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL--~KQF~~L~~LL~DDtPMVRRAAA~g  413 (1263)
                      ....++..-..|.|-++++..+..++.+|+..+....-..+.  .    +..+  .+-+..|..++.++.+.+|..|+..
T Consensus        93 ~~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~--~----~~~~~~~g~i~~Lv~lL~~~~~~~~~~a~~~  166 (529)
T d1jdha_          93 GLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEG--A----KMAVRLAGGLQKMVALLNKTNVKFLAITTDC  166 (529)
T ss_dssp             HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTT--H----HHHHHHHTHHHHHHHGGGCCCHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH--H----HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf             699999879899999985797989999999999986513201--1----3678765881489998870576888888999


Q ss_pred             HHHHHHHHHHHCCHH----HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHH--HHHHHHHHHHCCCCCHH
Q ss_conf             358788977207835----899999999987326787417899899899952899846789--82788664323798648
Q 000832          414 CCRILHLFWELIPSA----TITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHEVL--KVLLPRLGHLMQDNVLS  487 (1263)
Q Consensus       414 VcrILskfWEiIP~~----~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~SheiL--k~LLP~LksLI~DkSWR  487 (1263)
                          |..+...-+..    ....-+.+++.-+...+...++..+...+..+..++.....+  ...++.+..++++.+.+
T Consensus       167 ----L~~l~~~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~g~~~~L~~ll~~~~~~  242 (529)
T d1jdha_         167 ----LQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQR  242 (529)
T ss_dssp             ----HHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSSCHH
T ss_pred             ----HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHH
T ss_conf             ----9887630047888887605636899999861048999999998751101332330456543334699986254015


Q ss_pred             HHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             999999999986300297200102957999998107549999999974
Q 000832          488 VRLAMADLLLLLRDIRTFQFNKVVGLDILLSALANDQSQVAQKITRLL  535 (1263)
Q Consensus       488 VRyAvADLLleLk~irgiKF~~VV~~D~LLaRLa~Ds~~Vak~IvkLL  535 (1263)
                      ++..++..+..+.+....+...--.+..|+..+..++..+....+..|
T Consensus       243 ~~~~a~~~l~~ls~~~~~~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L  290 (529)
T d1jdha_         243 LVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGIL  290 (529)
T ss_dssp             HHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             553015677750432110256640101445412454288999999988


No 21 
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.20  E-value=0.032  Score=29.82  Aligned_cols=29  Identities=24%  Similarity=0.226  Sum_probs=13.0

Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf             82788664323798648999999999986
Q 000832          471 KVLLPRLGHLMQDNVLSVRLAMADLLLLL  499 (1263)
Q Consensus       471 k~LLP~LksLI~DkSWRVRyAvADLLleL  499 (1263)
                      ..++|.+..++++.++.||..++..+..+
T Consensus       187 ~~~l~~l~~ll~~~~~~~~~~a~~~l~~l  215 (434)
T d1q1sc_         187 EQILPTLVRLLHHNDPEVLADSCWAISYL  215 (434)
T ss_dssp             HHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHCCC
T ss_conf             56999999998524420125677664022


No 22 
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.15  E-value=0.034  Score=29.68  Aligned_cols=145  Identities=16%  Similarity=0.120  Sum_probs=75.0

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH--HHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHH
Q ss_conf             49999875169865789879997585258999731137789999--999999953307-997379999996335878897
Q 000832          345 TEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLF--DKQFFLLEKLLT-DDCPDVRVVAVEGCCRILHLF  421 (1263)
Q Consensus       345 Y~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL--~KQF~~L~~LL~-DDtPMVRRAAA~gVcrILskf  421 (1263)
                      +.|++.++++.++..+|..|+..+..+.-.- +..     +..+  .+-+..+.+++. |..|.||+.|+..+    +.+
T Consensus        60 ~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~-~~~-----~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~aL----~~l  129 (264)
T d1xqra1          60 MHLLVGRYLEAGAAGLRWRAAQLIGTCSQNV-AAI-----QEQVLGLGALRKLLRLLDRDACDTVRVKALFAI----SCL  129 (264)
T ss_dssp             HHHHHHTTTTCSSHHHHHHHHHHHHHHHTTC-HHH-----HHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHH----HHH
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-HHH-----HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHH----HHH
T ss_conf             9999999837999999999999999999888-888-----899997276379999960499899999999999----987


Q ss_pred             HHHCCHHH---HH-HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC-CCCCHHHH-H-HHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             72078358---99-9999999873267874178998998999528-99846789-8-27886643237986489999999
Q 000832          422 WELIPSAT---IT-KIITKIFDDNSHDLCNEVRLATVNGIIYLLG-NPLSHEVL-K-VLLPRLGHLMQDNVLSVRLAMAD  494 (1263)
Q Consensus       422 WEiIP~~~---I~-slL~kIi~~LAkDsQDSVRlaVVeGLiaLLk-n~~SheiL-k-~LLP~LksLI~DkSWRVRyAvAD  494 (1263)
                      ...-+...   .. .-+..++. +.++....|+..+...+..++. ++.....+ + ..+|.+..++++.+..||-.++.
T Consensus       130 ~~~~~~~~~~~~~~~gi~~L~~-lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~lL~~~~~~~~~~a~~  208 (264)
T d1xqra1         130 VREQEAGLLQFLRLDGFSVLMR-AMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLG  208 (264)
T ss_dssp             HTTCHHHHHHHHHTTHHHHHHH-HHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHH
T ss_pred             HCCCHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             4244026789987201268899-880586578899999999987445778888887646899999973999899999999


Q ss_pred             HHHHHH
Q ss_conf             999863
Q 000832          495 LLLLLR  500 (1263)
Q Consensus       495 LLleLk  500 (1263)
                      .|..+.
T Consensus       209 aL~~L~  214 (264)
T d1xqra1         209 ALCSLV  214 (264)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999998


No 23 
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.03  E-value=0.038  Score=29.28  Aligned_cols=57  Identities=19%  Similarity=0.150  Sum_probs=21.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf             678741789989989995289984678982788664323798648999999999986
Q 000832          443 HDLCNEVRLATVNGIIYLLGNPLSHEVLKVLLPRLGHLMQDNVLSVRLAMADLLLLL  499 (1263)
Q Consensus       443 kDsQDSVRlaVVeGLiaLLkn~~SheiLk~LLP~LksLI~DkSWRVRyAvADLLleL  499 (1263)
                      .+....++..+..++..+.+...........+|.+..++.+.+..||..++..|..+
T Consensus       237 ~~~~~~~~~~a~~~l~~ls~~~~~~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~l  293 (529)
T d1jdha_         237 TDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNL  293 (529)
T ss_dssp             TSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             254015553015677750432110256640101445412454288999999988750


No 24 
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.00  E-value=0.039  Score=29.18  Aligned_cols=29  Identities=10%  Similarity=0.131  Sum_probs=13.5

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf             86499998751698657898799975852
Q 000832          343 NLTEPVMFRSLQAANSNVRQNALHLLLDL  371 (1263)
Q Consensus       343 rLY~PILwRLLka~NftVR~SAa~LF~~a  371 (1263)
                      .-..|.+..+++..+..++..|+..+...
T Consensus       245 ~~~l~~l~~~l~~~d~~~~~~~~~~l~~l  273 (503)
T d1wa5b_         245 SQALPTLAKLIYSMDTETLVDACWAISYL  273 (503)
T ss_dssp             GGGHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             99999999872356389999999998753


No 25 
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.03  E-value=0.084  Score=26.89  Aligned_cols=146  Identities=13%  Similarity=0.004  Sum_probs=85.7

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH--HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             49999875169865789879997585258999731137789999999--9999533079973799999963358788977
Q 000832          345 TEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQ--FFLLEKLLTDDCPDVRVVAVEGCCRILHLFW  422 (1263)
Q Consensus       345 Y~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQ--F~~L~~LL~DDtPMVRRAAA~gVcrILskfW  422 (1263)
                      -.|.+-.+++..+..+|..|+..+....-. ++ .    .+..+.+.  ...|.+|+.++.|.||..|+..+    ..+.
T Consensus         3 ~ip~lv~~L~~~~~~~~~~a~~~l~~l~~~-~~-~----~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL----~~L~   72 (457)
T d1xm9a1           3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DE-S----AKQQVYQLGGICKLVDLLRSPNQNVQQAAAGAL----RNLV   72 (457)
T ss_dssp             CHHHHHHHHHSSCTHHHHHHHHHHHHHTSS-CS-S----HHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHH----HHHH
T ss_pred             CHHHHHHHHCCCCHHHHHHHHHHHHHHHCC-CH-H----HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH----HHHH
T ss_conf             789999985799999999999999999849-99-9----999999888599999987799989999999999----9997


Q ss_pred             HHCCH--HHHHH--HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHH-HHHHHHHHHHHH----------------C
Q ss_conf             20783--58999--999999873267874178998998999528998467-898278866432----------------3
Q 000832          423 ELIPS--ATITK--IITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHE-VLKVLLPRLGHL----------------M  481 (1263)
Q Consensus       423 EiIP~--~~I~s--lL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~She-iLk~LLP~LksL----------------I  481 (1263)
                      .--+.  ..+.+  -+..++.-+.++..+.||..+...+..+........ .....+|.+...                .
T Consensus        73 ~~~~~~~~~i~~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  152 (457)
T d1xm9a1          73 FRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSR  152 (457)
T ss_dssp             SSCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHHHHHHHHHHHTTHHHHTCC--------
T ss_pred             CCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHC
T ss_conf             49988899999879828999998433738899999999999986413578888601078899987532211000035530


Q ss_pred             CCCCHHHHHHHHHHHHHHH
Q ss_conf             7986489999999999863
Q 000832          482 QDNVLSVRLAMADLLLLLR  500 (1263)
Q Consensus       482 ~DkSWRVRyAvADLLleLk  500 (1263)
                      +..+.+|+..++..+..+.
T Consensus       153 ~~~~~~v~~~a~~~l~~~~  171 (457)
T d1xm9a1         153 EVVDPEVFFNATGCLRNLS  171 (457)
T ss_dssp             -CCCHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHH
T ss_conf             2144999999999999873


No 26 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.44  E-value=0.12  Score=25.92  Aligned_cols=85  Identities=9%  Similarity=0.238  Sum_probs=35.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHCCHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             321046799999998521001122356-344002466402024-547999989851799999998234423788887799
Q 000832          972 CAKFTTAYVQYVISALGQQSRDNLLFN-YNDLKETFISLKSSF-SYAAKLINLCLRDSSEASPPPAEAFDLVNELINLIC 1049 (1263)
Q Consensus       972 ~l~f~s~~~~~~~s~~~~~~~~~~~f~-~~~~k~~~~~~kssf-syaak~l~l~l~~~~e~s~~~~~af~lan~lldl~~ 1049 (1263)
                      +.+|....+.++...+....+...... -+-+.++.......+ .|...+++..+..-......+    .+....+..+.
T Consensus       643 ~~~~l~~ii~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~~l~~~~~~~----~~k~~~~~~i~  718 (876)
T d1qgra_         643 FLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHR----SVKPQILSVFG  718 (876)
T ss_dssp             GGGGHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHTCTTSCG----GGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHHH
T ss_conf             67779989999999981888589999999999999987277654269999999999818766889----99999999999


Q ss_pred             HHHHHCCHHHH
Q ss_conf             78650020135
Q 000832         1050 SVELHMDSGYA 1060 (1263)
Q Consensus      1050 sve~~~gs~~a 1060 (1263)
                      .+=..+|..|.
T Consensus       719 ~i~~~~~~~~~  729 (876)
T d1qgra_         719 DIALAIGGEFK  729 (876)
T ss_dssp             HHHHHHGGGGG
T ss_pred             HHHHHHHHHHH
T ss_conf             99999708658


No 27 
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=92.54  E-value=0.23  Score=23.79  Aligned_cols=37  Identities=16%  Similarity=0.371  Sum_probs=20.8

Q ss_pred             HHHHHHHHHHHHHHH----CCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             789999999998420----3684999999857887653366
Q 000832          253 KPMLKDVLAMIKSQI----SFERKSMLEAYGDVLYRAWKGV  289 (1263)
Q Consensus       253 ~~li~~ih~tIKnQL----p~~~kS~le~YGEIyFrAWK~A  289 (1263)
                      ...++.+...++..-    |..+++..-+||.+..+..++.
T Consensus       122 ~~~l~~~~~l~~~~~~~~~~~l~~~a~La~gslv~~~c~~~  162 (336)
T d1lsha1         122 RESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANT  162 (336)
T ss_dssp             HHHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999997082001262489999999999999996578


No 28 
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.87  E-value=0.28  Score=23.26  Aligned_cols=151  Identities=12%  Similarity=0.071  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             88649999875169865789879997585258999731137789999999999953307997379999996335878897
Q 000832          342 FNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILHLF  421 (1263)
Q Consensus       342 ~rLY~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrILskf  421 (1263)
                      ..-..|.+.++++..+..++.+++.++.......++...    .......+..+..++..+.+.++..|+..    ++.+
T Consensus       202 ~~~~~~~L~~ll~~~~~~~~~~~~~~l~nl~~~~~~~~~----~~~~~~~l~~l~~~l~~~d~~~~~~~~~~----l~~l  273 (503)
T d1wa5b_         202 QCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPD----WSVVSQALPTLAKLIYSMDTETLVDACWA----ISYL  273 (503)
T ss_dssp             HTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCC----HHHHGGGHHHHHHHTTCCCHHHHHHHHHH----HHHH
T ss_pred             HHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHH----HHHHHHHHHHHHHHHCCCCHHHHHHHHHH----HHHH
T ss_conf             413556301204568889999999999998468742047----99999999999987235638999999999----8753


Q ss_pred             HHHCCHHHHHHH----HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCH--HHHH-HHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             720783589999----9999987326787417899899899952899846--7898-27886643237986489999999
Q 000832          422 WELIPSATITKI----ITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSH--EVLK-VLLPRLGHLMQDNVLSVRLAMAD  494 (1263)
Q Consensus       422 WEiIP~~~I~sl----L~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~Sh--eiLk-~LLP~LksLI~DkSWRVRyAvAD  494 (1263)
                      .+.- .+.+...    +.+.+-.+...+...|+..++..+..++......  .... .++|.+..+++...+.||..++-
T Consensus       274 ~~~~-~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~  352 (503)
T d1wa5b_         274 SDGP-QEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACW  352 (503)
T ss_dssp             HSSC-HHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHH
T ss_pred             CCCC-CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             2277-111100112233111011025786364456777777787788887876312340999999963997888999987


Q ss_pred             HHHHHHC
Q ss_conf             9998630
Q 000832          495 LLLLLRD  501 (1263)
Q Consensus       495 LLleLk~  501 (1263)
                      .+..+..
T Consensus       353 ~l~nl~~  359 (503)
T d1wa5b_         353 TISNITA  359 (503)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHH
T ss_conf             7888861


No 29 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.22  E-value=0.62  Score=20.84  Aligned_cols=106  Identities=19%  Similarity=0.118  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHH
Q ss_conf             886499998751698657898799975852589997311377899999999999533--079973799999963358788
Q 000832          342 FNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKL--LTDDCPDVRVVAVEGCCRILH  419 (1263)
Q Consensus       342 ~rLY~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~L--L~DDtPMVRRAAA~gVcrILs  419 (1263)
                      .-+....+.+-++..|..+|..|...+...   ..++.     -..+   ...+.++  ..|+.|.||+.|+..+.++..
T Consensus       101 ~~L~iNtl~KDL~s~n~~ir~lALr~L~~i---~~~~i-----~~~l---~~~V~k~l~~~d~~p~VRk~A~l~l~ki~~  169 (584)
T d2vgla_         101 IRLINNAIKNDLASRNPTFMGLALHCIANV---GSREM-----AEAF---AGEIPKILVAGDTMDSVKQSAALCLLRLYR  169 (584)
T ss_dssp             HHHHHHHHHHHHHSCCHHHHHHHHHHHHHH---CCHHH-----HHHH---TTHHHHHHHCSSSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHCC---CCHHH-----HHHH---HHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             999999999886999989999999998737---99888-----8877---899987503589868999999999999998


Q ss_pred             HHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             9772078358999999999873267874178998998999528
Q 000832          420 LFWELIPSATITKIITKIFDDNSHDLCNEVRLATVNGIIYLLG  462 (1263)
Q Consensus       420 kfWEiIP~~~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLk  462 (1263)
                      .+-+.+....    +.+.+..+..|...+|+.+++..+..+..
T Consensus       170 ~~pd~~~~~~----~~~~L~~lL~D~d~~V~~aAl~ll~eI~~  208 (584)
T d2vgla_         170 TSPDLVPMGD----WTSRVVHLLNDQHLGVVTAATSLITTLAQ  208 (584)
T ss_dssp             HCGGGCCCCS----CHHHHHHHTTCSCHHHHHHHHHHHHHHHH
T ss_pred             HCHHHHHHHH----HHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             6966533302----79999998169982489999999999998


No 30 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.92  E-value=0.64  Score=20.73  Aligned_cols=32  Identities=22%  Similarity=0.204  Sum_probs=14.1

Q ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             89827886643237986489999999999863
Q 000832          469 VLKVLLPRLGHLMQDNVLSVRLAMADLLLLLR  500 (1263)
Q Consensus       469 iLk~LLP~LksLI~DkSWRVRyAvADLLleLk  500 (1263)
                      ++..++|.+...+.+++|++|.+++-.|..+.
T Consensus       392 il~~~l~~l~~~l~s~~~~~reaa~~alg~i~  423 (888)
T d1qbkb_         392 LLPHILPLLKELLFHHEWVVKESGILVLGAIA  423 (888)
T ss_dssp             SHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             99999999887512205689999999864355


No 31 
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.08  E-value=0.71  Score=20.43  Aligned_cols=149  Identities=9%  Similarity=0.027  Sum_probs=80.9

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--HHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             886499998751698657898799975852589997311377899999--999999533079973799999963358788
Q 000832          342 FNLTEPVMFRSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFD--KQFFLLEKLLTDDCPDVRVVAVEGCCRILH  419 (1263)
Q Consensus       342 ~rLY~PILwRLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~--KQF~~L~~LL~DDtPMVRRAAA~gVcrILs  419 (1263)
                      ..-+.|.+..+++.++..++.+|+..+...... +++.     ...+.  +.+..+..++.++.+.||+.|+..+    .
T Consensus       228 ~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~-~~~~-----~~~~~~~~~~~~l~~ll~~~~~~v~~~a~~~L----~  297 (434)
T d1q1sc_         228 KKGVVPQLVKLLGATELPIVTPALRAIGNIVTG-TDEQ-----TQKVIDAGALAVFPSLLTNPKTNIQKEATWTM----S  297 (434)
T ss_dssp             TTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTS-CHHH-----HHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHH----H
T ss_pred             HCCCCHHCCCCCCCCHHHHHHCHHHHHHHHHHH-HHHH-----HHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHH----H
T ss_conf             315420100002343065540212213567766-6677-----89998525640577761364146668888788----6


Q ss_pred             HHHHHCCHH---HHH-HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHH---HHH-HHHHHHHHHCCCCCHHHHHH
Q ss_conf             977207835---899-9999999873267874178998998999528998467---898-27886643237986489999
Q 000832          420 LFWELIPSA---TIT-KIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLSHE---VLK-VLLPRLGHLMQDNVLSVRLA  491 (1263)
Q Consensus       420 kfWEiIP~~---~I~-slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~She---iLk-~LLP~LksLI~DkSWRVRyA  491 (1263)
                      .+...-+..   ... ..+..+++ +..+....||..++..+..+......+.   ..+ .+++.+..++.++.++++.+
T Consensus       298 ~l~~~~~~~~~~i~~~~~i~~li~-~l~~~~~~v~~~a~~~l~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~d~~~~~~  376 (434)
T d1q1sc_         298 NITAGRQDQIQQVVNHGLVPFLVG-VLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQV  376 (434)
T ss_dssp             HHTTSCHHHHHHHHHTTCHHHHHH-HHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHHTTSSCHHHHHH
T ss_pred             HHCCCCCHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH
T ss_conf             520045045777766546899998-7751586889999999999983499999999998976999999865999899999


Q ss_pred             HHHHHHHHHC
Q ss_conf             9999998630
Q 000832          492 MADLLLLLRD  501 (1263)
Q Consensus       492 vADLLleLk~  501 (1263)
                      +...+..+-.
T Consensus       377 ~l~~l~~ll~  386 (434)
T d1q1sc_         377 ILDAISNIFQ  386 (434)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
T ss_conf             9999999999


No 32 
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.85  E-value=0.72  Score=20.36  Aligned_cols=187  Identities=20%  Similarity=0.197  Sum_probs=106.7

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH--HHH-HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH-
Q ss_conf             6986578987999758525899973113778999999--999-995330799737999999633587889772078358-
Q 000832          354 QAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDK--QFF-LLEKLLTDDCPDVRVVAVEGCCRILHLFWELIPSAT-  429 (1263)
Q Consensus       354 ka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~K--QF~-~L~~LL~DDtPMVRRAAA~gVcrILskfWEiIP~~~-  429 (1263)
                      ++.....|..|+..+.....  +.+ .    ...+.+  .+. ++..++.++.+.||..|+.    +++.+...-|... 
T Consensus        27 ~~~~~~~~~~Al~~L~~L~~--~~d-~----a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~----~L~~l~~~~~~~~~   95 (264)
T d1xqra1          27 QAADQQEREGALELLADLCE--NMD-N----AADFCQLSGMHLLVGRYLEAGAAGLRWRAAQ----LIGTCSQNVAAIQE   95 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT--SHH-H----HHHHHHTTHHHHHHHTTTTCSSHHHHHHHHH----HHHHHHTTCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHC--CHH-H----HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH----HHHHHHHHHHHHHH
T ss_conf             07999999999999999976--978-8----9999986999999999837999999999999----99999988888889


Q ss_pred             ---HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC-HHHH--HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             ---9999999998732678741789989989995289984-6789--827886643237986489999999999863002
Q 000832          430 ---ITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLS-HEVL--KVLLPRLGHLMQDNVLSVRLAMADLLLLLRDIR  503 (1263)
Q Consensus       430 ---I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~S-heiL--k~LLP~LksLI~DkSWRVRyAvADLLleLk~ir  503 (1263)
                         -...+.+++.-+..|..+.||..++..+..+...... ...+  ...+|.+..++++.+.+||..++..+..+....
T Consensus        96 ~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~  175 (264)
T d1xqra1          96 QVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGH  175 (264)
T ss_dssp             HHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
T ss_conf             99972763799999604998999999999999874244026789987201268899880586578899999999987445


Q ss_pred             CCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-HHHHCCHHHHHHH
Q ss_conf             972001029579999981075499999999740027999999688849999-9973296899999
Q 000832          504 TFQFNKVVGLDILLSALANDQSQVAQKITRLLMPSYFPLKVNIKEACSRCV-TIVKRSPVAGARF  567 (1263)
Q Consensus       504 giKF~~VV~~D~LLaRLa~Ds~~Vak~IvkLLipSfFP~k~s~~E~~~RCi-~Lik~np~Aa~~F  567 (1263)
                      ...          ...+...  .+-..++++|...    +....+.+-+++ .|...+|.....+
T Consensus       176 ~~~----------~~~~~~~--~~v~~L~~lL~~~----~~~~~~~a~~aL~~L~~~~~~~~~~~  224 (264)
T d1xqra1         176 PEH----------KGTLCSM--GMVQQLVALVRTE----HSPFHEHVLGALCSLVTDFPQGVREC  224 (264)
T ss_dssp             GGG----------HHHHHHT--THHHHHHHHHTSC----CSTHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             HHH----------HHHHHHH--HHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf             778----------8888876--4689999997399----98999999999999986488999999


No 33 
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.80  E-value=0.73  Score=20.34  Aligned_cols=115  Identities=14%  Similarity=0.174  Sum_probs=61.9

Q ss_pred             HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH--HHHHHCCHH
Q ss_conf             751698657898799975852589997311377899999999999533079973799999963358788--977207835
Q 000832          351 RSLQAANSNVRQNALHLLLDLFPLEDPDATKEVKDTLFDKQFFLLEKLLTDDCPDVRVVAVEGCCRILH--LFWELIPSA  428 (1263)
Q Consensus       351 RLLka~NftVR~SAa~LF~~aFPlvdpd~tkEe~d~EL~KQF~~L~~LL~DDtPMVRRAAA~gVcrILs--kfWEiIP~~  428 (1263)
                      ...+.++|.+-..|-.-|.+.+-.... ..++=........|..+.+|+..+...+||.+.+=+..+|-  ....++..-
T Consensus       162 ~yv~~~~FdiasDAf~TfkelLt~hk~-~~aefl~~Nyd~Ff~~~~~LL~s~NYVtrRqSlKLLgelLldr~N~~vm~~Y  240 (330)
T d1upka_         162 RYVEMSTFDIASDAFATFKDLLTRHKL-LSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKY  240 (330)
T ss_dssp             HHTTCSSHHHHHHHHHHHHHHHHSSHH-HHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHSGGGHHHHHHH
T ss_pred             HHHCCCCHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             997387158889899999999970889-9999999849999999999964884277998899999998655679999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             89999999998732678741789989989995289984
Q 000832          429 TITKIITKIFDDNSHDLCNEVRLATVNGIIYLLGNPLS  466 (1263)
Q Consensus       429 ~I~slL~kIi~~LAkDsQDSVRlaVVeGLiaLLkn~~S  466 (1263)
                      +....-.+++..|.+|.+-.++.-++..+-....||..
T Consensus       241 vs~~~nLkl~M~LLrd~sk~Iq~EAFhVFKvFVANpnK  278 (330)
T d1upka_         241 ISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNK  278 (330)
T ss_dssp             TTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSC
T ss_pred             HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             67888899999982173133779866585530118999


Done!