BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000833
(1263 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4 OS=Arabidopsis
thaliana GN=SMC4 PE=2 SV=1
Length = 1241
Score = 1775 bits (4597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 903/1255 (71%), Positives = 1045/1255 (83%), Gaps = 33/1255 (2%)
Query: 10 ASPGSRK--WPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFV 67
+ P RK PRL+IKE+VMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFV
Sbjct: 12 SEPEQRKSGTPRLYIKELVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFV 71
Query: 68 FGKRAKQMRLNKVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVA 127
FGKRAKQMRLNKVSELIHNSTN+QNLDSAGVSV F+EI+DL++G YE + GSDF+I+RVA
Sbjct: 72 FGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVQFEEIIDLENGLYETVPGSDFMITRVA 131
Query: 128 FRDNSSKYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEG 187
FRDNSSKYYIN+R SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK QGPHDEG
Sbjct: 132 FRDNSSKYYINERSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEG 191
Query: 188 FLEYLEDIIGTDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIAWRF 247
FLEYLEDIIGT++YVEKIDE K L LN S V + K +R
Sbjct: 192 FLEYLEDIIGTNKYVEKIDELNKQ------LETLNESRSGVVQMVKLAEKERD------- 238
Query: 248 VCVSVLDVKNEAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNERE 307
++ +K+EAE YMLKELS LKWQEKAT +AYEDT KI E ++++ LE +LK+ER
Sbjct: 239 ---NLEGLKDEAETYMLKELSHLKWQEKATKMAYEDTVAKITEQRDSLQNLENSLKDERV 295
Query: 308 KIQDNNKTLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKIKK 367
K+ ++N+ LK+ ESVH K+ +RQE LDN+LR KE+FKEFERQDVK+RED KH+KQKIKK
Sbjct: 296 KMDESNEELKKFESVHEKHKKRQEVLDNELRACKEKFKEFERQDVKHREDLKHVKQKIKK 355
Query: 368 LEVKVEKDSSKIDDLTKECEHATNQIPKLEENIPKLLKLF--ENVFIADTQNIITFPFMN 425
LE K+EKDSSKI D+TKE E ++N IPKL+ENIPKL K+ E + + + I
Sbjct: 356 LEDKLEKDSSKIGDMTKESEDSSNLIPKLQENIPKLQKVLLDEEKKLEEIKAIAK----- 410
Query: 426 MINLCVETERYRSELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEKHEAGRKAFEDA 485
VETE YRSEL +RAELEPWEK+LIVH+GKL+V +ES+LL +KHEA KAF DA
Sbjct: 411 -----VETEGYRSELTKIRAELEPWEKDLIVHRGKLDVASSESELLSKKHEAALKAFTDA 465
Query: 486 QRQMDDILRRIDTKTTAIRNMQGDLEKNKLEAMEAHNVEQECFKEQETLIPLEQAARQKV 545
Q+Q+ DI R K A + + D++K K EA+EA VE+E KEQETL+P EQAAR+KV
Sbjct: 466 QKQLSDISTRKKEKAAATTSWKADIKKKKQEAIEARKVEEESLKEQETLVPQEQAAREKV 525
Query: 546 AELKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVSTACPGLDYI 605
AELKS M+SEKSQ VLKA+L+AKE+NQIEGIYGRMGDLGAIDAKYD+A+STAC GLDYI
Sbjct: 526 AELKSAMNSEKSQNEVLKAVLRAKENNQIEGIYGRMGDLGAIDAKYDVAISTACAGLDYI 585
Query: 606 VVETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTPENVPRLFDLIKVKDE 665
VVETTS+AQACVELLR+ LG ATFMILEKQ D K+KE TPE+VPRLFDL++VKDE
Sbjct: 586 VVETTSSAQACVELLRKGNLGFATFMILEKQTDHIHKLKEKVKTPEDVPRLFDLVRVKDE 645
Query: 666 RMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGG 725
RMKLAFYAA+GNT+VAKDLDQATRIAY GN+EFRRVV LDGALFEKSGTMSGGG K RGG
Sbjct: 646 RMKLAFYAALGNTVVAKDLDQATRIAYGGNREFRRVVALDGALFEKSGTMSGGGGKARGG 705
Query: 726 KMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHYQASEKAVAHLEMELAK 785
+MGTSIR T VS EA+ NAE ELS +VD L+ IR+K+ +AV+ Y+A+E V+ LEMELAK
Sbjct: 706 RMGTSIRATGVSGEAVANAENELSKIVDMLNNIREKVGNAVRQYRAAENEVSGLEMELAK 765
Query: 786 SRKEIESLKSQHSYLEKQLDSLKAASEPRKDEIDRLEELQKIISAEEKEIEKIVNGSKDL 845
S++EIESL S+H+YLEKQL SL+AAS+P+ DEIDRL+EL+KIIS EEKEIE + GSK L
Sbjct: 766 SQREIESLNSEHNYLEKQLASLEAASQPKTDEIDRLKELKKIISKEEKEIENLEKGSKQL 825
Query: 846 KEKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRHKVQIETAQKMIKKLTKG 905
K+K LQ+ +ENAGGEKLK QK KV+KIQ+DIDK++TEINR VQIET QK+IKKLTKG
Sbjct: 826 KDK---LQTNIENAGGEKLKGQKAKVEKIQTDIDKNNTEINRCNVQIETNQKLIKKLTKG 882
Query: 906 IAESKKEKEQLVEERVKMERIFDEILEKAHNVQEHYTNTQKLIDQHRDVLDKAKNDYEKL 965
I E+ +EKE+L E+ + F +I +KA +QE Y TQ+LID+H+DVL AK+DYE L
Sbjct: 883 IEEATREKERLEGEKENLHVTFKDITQKAFEIQETYKKTQQLIDEHKDVLTGAKSDYENL 942
Query: 966 KKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQKDLVDP 1025
KK+VDEL+AS ++A++K+QD+K+ Y ELEMR KGYKK+L+DLQI KH+EQIQKDLVDP
Sbjct: 943 KKSVDELKASRVDAEFKVQDMKKKYNELEMREKGYKKKLNDLQIAFTKHMEQIQKDLVDP 1002
Query: 1026 EKLQATLADQTLSDACDLKRTLEMVALLEAQLKELNPNLDSITEYRRKVAAYNERVEDLT 1085
+KLQATL D L++ACDLKR LEMVALLEAQLKELNPNLDSI EYR KV YN RV++L
Sbjct: 1003 DKLQATLMDNNLNEACDLKRALEMVALLEAQLKELNPNLDSIAEYRSKVELYNGRVDELN 1062
Query: 1086 TVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFS 1145
+VTQ+RDD +KQYDE RK+RLDEFMAGFN ISLKLKEMYQMITLGGDAELELVDSLDPFS
Sbjct: 1063 SVTQERDDTRKQYDELRKRRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFS 1122
Query: 1146 EGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVS 1205
EGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVS
Sbjct: 1123 EGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVS 1182
Query: 1206 IVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFTVCE 1260
IVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF VC+
Sbjct: 1183 IVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVCQ 1237
>sp|Q54LV0|SMC4_DICDI Structural maintenance of chromosomes protein 4 OS=Dictyostelium
discoideum GN=smc4 PE=3 SV=1
Length = 1415
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/1287 (40%), Positives = 767/1287 (59%), Gaps = 109/1287 (8%)
Query: 19 RLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLN 78
RL I +MVM NFKSYAG Q VGPFHK FS+VVGPNGSGKSNVIDAMLFVFG RAKQ+RLN
Sbjct: 157 RLMITKMVMENFKSYAGAQEVGPFHKCFSSVVGPNGSGKSNVIDAMLFVFGYRAKQIRLN 216
Query: 79 KVSELIHNSTNYQNLDSAGVSVHFQEIVDLD-DGTYEAIQGSDFVISRVA-----FRDNS 132
K+SELIHNS N++NL + VSVHFQEI+DL + YE ++GS+FV++R A +D
Sbjct: 217 KISELIHNSENHKNLTNGRVSVHFQEIIDLPGEDNYEVVKGSEFVVTRTAQKTGNNKDGV 276
Query: 133 SKYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYL 192
SKYY+ND+ ++ LK KG+DLDNNRFLILQGEVEQI++MKPKG P +EG LEYL
Sbjct: 277 SKYYLNDKVVKLDDLKTILKDKGIDLDNNRFLILQGEVEQIAMMKPKGVHPGEEGLLEYL 336
Query: 193 EDIIGTDRYVEKIDESYKDYVVLFDLIG-----LNHSMRNVPVLFKWLNWQRKKEIAWRF 247
EDIIG+ +Y+ I+ + K L + IG N+ M+ V L +R
Sbjct: 337 EDIIGSKKYLPDIEATSK----LIEDIGDKRTSSNNRMKVVEKEKDALQQER-------- 384
Query: 248 VCVSVLDVKNEAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNERE 307
+ A Y+ KEL L+ + + + E+ +E+ L+ E
Sbjct: 385 ---------DNALEYIDKELKLIHCKSIHYQIGRSKPEREKNEIAAKQEMVEKQLEQELV 435
Query: 308 KIQDNNKTLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKIKK 367
+ +N L E E + ++ +EL+ + K E E++ VKY+E++KH+K K+KK
Sbjct: 436 TQKASNDKLLEFEKNLKQQNKQLDELNKQMAKCKNELLTTEKKGVKYKEETKHLKTKVKK 495
Query: 368 LEVKVEKDSSKIDDLTKECEHATNQIPKLEEN---IPKLLKLFENVFIADTQNIITFPFM 424
+E+++ K + + I + E+ +PK L + E
Sbjct: 496 NNSVIEEETKKQAEFERSTIIHKQDIVRFEKEYVELPKELIVEEK------------KLE 543
Query: 425 NMIN-LCVETERYRSELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEKHEAGRKAFE 483
+M+N L E + E+ + +L PW K+ K +++ +E +L K F
Sbjct: 544 SMLNSLKGEVTELQREMEEKQKQLLPWSKKHSEAKAVVDLKTSELAVLS-------KDFN 596
Query: 484 DAQRQMDDILRRIDTKTTAIRNMQGDLEKNK--LEAMEAHNVEQE-----CFKEQETLIP 536
A + +DD ++ ++ T + ++ K+K LE+++A V+ E +E L
Sbjct: 597 GATQNLDDAIKALEDAKTISSTRKNNITKSKKELESVKAIIVDLEKRLASGKVTEENLYR 656
Query: 537 LEQAARQKVAELKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVS 596
A++++ ++K+ + S+ ++L +L+ KES QI GI+GR+GDLGAID KYD+A+S
Sbjct: 657 NTMDAKRQLEQIKTNLSENSSRNTILDRLLKIKESGQISGIHGRLGDLGAIDQKYDVAIS 716
Query: 597 TAC-PGLDYIVVETTSAAQACVELLRREKLGVATFMILE----KQVDLFPKMKEHFSTPE 651
TA +D I+VETT+AA+ACVELLR+E LG ATFMILE ++ +L P TP
Sbjct: 717 TAAFSQMDNIIVETTAAAEACVELLRKENLGRATFMILENLEYQRQNLGP-----VQTPN 771
Query: 652 NVPRLFDLIKVKDER-MKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFE 710
N PRLFDLIK+KDE+ AF+ A+G+TLVA LD+AT+IAY + RVVTLDG+L +
Sbjct: 772 NTPRLFDLIKMKDEKKYATAFFTAVGHTLVADTLDEATKIAYGAKR--HRVVTLDGSLID 829
Query: 711 KSGTMSGGGSKPRGGKMGTSIR--PTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKH 768
SG MSGGG KPR G M + ++ P + +I + LS + +L + R ++ +
Sbjct: 830 TSGAMSGGGLKPRVGAMNSKLKGDPKE-DKKKLIELQDNLSQLDSDLRQCRDELVEIENQ 888
Query: 769 YQASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQLDSLKAASEPRKDEIDRLEELQKII 828
Q ++ + LE+EL K +I++ ++ L K + LK ++ ++ ++++ +++ +
Sbjct: 889 IQQAQNRRSELELELPKMDMDIKAAITKCEELTKVIPQLKNKAKLSTEKKEQIDSIKESL 948
Query: 829 SAEEKEIEKIVNGSKDLKEKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRH 888
++K ++K+ L+ + ++Q+ + N GG +LK QK KV+ +QS ID + T +
Sbjct: 949 IVDQKSLDKVQEKVNKLESEVQEIQNSILNVGGPQLKMQKNKVESLQSRIDSNQTNTTKA 1008
Query: 889 KVQIETAQKMIKKLTKGIAESKKEKEQ--------------LVEERVKMERIFDEILEKA 934
VQI++ K ++K K + E+ KEK++ L +E +K + + E+
Sbjct: 1009 NVQIKSLAKSMEKSIKILNENTKEKDENEAALAEILEKYKSLEKENLKATEAMEAVSEQL 1068
Query: 935 HNVQEHYTNTQKLIDQHRDVLDKAKNDYEKLKKTVDELRASEIEADYKLQDLKRSYKELE 994
+E +K ++ + V++K K KL+ ++E + E ++ D +
Sbjct: 1069 REKEEETKEIRKEHEKAKKVIEKIKVSNSKLETQIEEFKTLINEKQAEIADCLSKFANQA 1128
Query: 995 MRGKGYKKRLDDLQITLLKHLEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEMVALLE 1054
+ K YK +D+ +L+ + I + PE+++ + +A + + + + L
Sbjct: 1129 KKAKIYKDYVDE---SLINQVSAI----LTPEEIEQYM------EATEQQNLIAKIHELT 1175
Query: 1055 AQL----KELNPNLDSITEYRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFM 1110
Q+ KE N N++ + ++++K Y+ R + + ++RD++ K+Y+ RK RLDEFM
Sbjct: 1176 TQIQKISKENNVNIEVVKDFQKKEQEYHSRKAEFDEIEKERDNLSKRYESLRKNRLDEFM 1235
Query: 1111 AGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEK 1170
AGF I++KLKE+YQMITLGGDAELE++D DPF EG+ FSVRPPKKSWKNI+NLSGGEK
Sbjct: 1236 AGFTIITMKLKEIYQMITLGGDAELEIIDREDPFQEGISFSVRPPKKSWKNISNLSGGEK 1295
Query: 1171 TLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMF 1230
TLSSLALVFALHHYKP LYVMDEIDAALDFKNVSI+ +Y+K+RTK+AQFIIISLRN MF
Sbjct: 1296 TLSSLALVFALHHYKPNALYVMDEIDAALDFKNVSIIANYIKERTKNAQFIIISLRNYMF 1355
Query: 1231 ELADRLVGIYKTDNCTKSITINPGSFT 1257
ELADRLVGIYKTDNCTKS+TINP SFT
Sbjct: 1356 ELADRLVGIYKTDNCTKSVTINPNSFT 1382
>sp|P50532|SMC4_XENLA Structural maintenance of chromosomes protein 4 OS=Xenopus laevis
GN=smc4 PE=1 SV=1
Length = 1290
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/1259 (40%), Positives = 759/1259 (60%), Gaps = 82/1259 (6%)
Query: 18 PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRL 77
PRL I +V +NFKSYAGE+ +GPFHK FS ++GPNGSGKSNVID+MLFVFG RA+++R
Sbjct: 74 PRLMITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRS 133
Query: 78 NKVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYI 137
K+S LIHNS ++++ S V VHFQ+I+D + +E I S+F +SR A++DNSS Y+I
Sbjct: 134 KKLSVLIHNSDEHKDVQSCTVEVHFQKIIDKEGDDFEVIPNSNFYVSRTAYKDNSSVYHI 193
Query: 138 NDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIG 197
+ + + F +V L+ G+DLD+NRFLILQGEVEQI++MKPKGQ HDEG LEYLEDIIG
Sbjct: 194 SGKKATFKDVGLLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIG 253
Query: 198 TDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFK---WLNWQRKKEIAWRFVCVSVLD 254
++R E I + +L + G + V ++ K L ++ K I + V
Sbjct: 254 SERLKEPIQILCRRVELLNEQRG--EKLNRVKMVEKEKDALEGEKNKAIEFLTVENETFK 311
Query: 255 VKNEAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNEREKIQDNNK 314
KN+ Y + +L Q+++ D + ++QE+ + E E +++ NK
Sbjct: 312 KKNQLCQYYIHDL-----QKRS-----RDKEAQKEKIQEDTKDISEKSNTLLETMKEKNK 361
Query: 315 TLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKIKKLEVKVEK 374
LK++E NK + EE ++E+F + + QDV RE KH K K+KKL+ +++K
Sbjct: 362 ALKDVEKQLNKITKFIEE-------NREKFTQLDLQDVDTREKLKHSKSKVKKLQKQLQK 414
Query: 375 DSSKIDDLTKECEHATNQIPKLEENIPKLLKLFENVFIADTQNIITFPFMNMINLCVETE 434
D K+D+L K + +I E N LL+ + +N+ M +L ET+
Sbjct: 415 DKEKVDEL-KNVPANSQKIIAEETNKKDLLEKQKEKEEEKLKNV-------MDSLKKETQ 466
Query: 435 RYRSELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEKHEAGRKAFEDAQRQMDDILR 494
+ E EL K + + K++V +E + +H + A+ ++
Sbjct: 467 GLQEEKEVKEKELMEISKTVNEARSKMDVAQSELDIYLSRHNSALSQLNKAKEALNTASA 526
Query: 495 RIDTKTTAIRNMQ-------GDLEKNKLEAMEAHNVEQECFKEQETLIPLEQAARQKVAE 547
+ + AI+ ++ GDL+K + E +E+ E+ K Q + RQKV E
Sbjct: 527 TLKERRAAIKELETKLPKDEGDLKKREKE-LESLVSEEGNIKNQV------RELRQKVEE 579
Query: 548 LKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVSTACPGLDYIVV 607
+S + + +S+G VL A++Q K+S +I GI+GR+GDLGAID KYD+A+S++C LD+IVV
Sbjct: 580 ARSSLSANRSRGKVLDALIQQKKSGKIPGIFGRLGDLGAIDEKYDVAISSSCGALDHIVV 639
Query: 608 ETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTPENVPRLFDLIKVKDERM 667
+T AQ CV L+++ +GVATF+ L+K + ++ K TPEN+PRLFD++KVKDE++
Sbjct: 640 DTIDTAQECVNFLKKQNVGVATFIGLDK-MKVWEKGLNKIQTPENIPRLFDMVKVKDEQI 698
Query: 668 KLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKM 727
K AFY A+ +T+VA +LDQATR+A+ +K +R VVTL G + E+SGTM+GGG K G+M
Sbjct: 699 KPAFYFALRDTIVANNLDQATRVAFQKDKRWR-VVTLQGQIIEQSGTMTGGGGKVMKGRM 757
Query: 728 GTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHYQASEKAVAHLEMELAKSR 787
G+S+ +S + + E +L + I+ + A + +A ++ K
Sbjct: 758 GSSVM-VEISDDQLQKMENKLKTDTTRATEIQDRKAHLEEEVAKLRQATREMKNTFEKYT 816
Query: 788 KEIESLKSQHSYLEKQLDSLK---AASEPRKDEIDRLEELQKIISAEEKEIEKIVNGSKD 844
++SL Q +L+ Q+ L+ AA+ P K++ ++E K + +KE EK+ +
Sbjct: 817 ASLQSLSEQEVHLKAQVKELEVNVAAAAPDKNQQKQME---KNLETLKKEYEKVAEKAGK 873
Query: 845 LKEKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRHKVQIETAQKMIKKLTK 904
++ + +L + + KLKAQ+ K+DK+ +ID+ ++ I + +V I+TA + +KK +
Sbjct: 874 VEAEVKRLHKLIVDINNHKLKAQQDKLDKVTKEIDECASAITKAQVSIKTADRNLKKSEE 933
Query: 905 GIAESKKEK-------EQLVEERVKMERIFDEILEKAHNVQEHYTNTQKLIDQHRDVLDK 957
+A ++KE E+L E+ K+E ++ + + Q +QHR +L +
Sbjct: 934 AVARTEKEIVANDKSIEELTEDLKKLEEKATTVMNECKEAECSLPEVQ---EQHRSLLQE 990
Query: 958 AKNDYEK---LKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITLLKH 1014
K EK L+K +R + ++ + E + + K ++K + + L
Sbjct: 991 IKAIQEKEHALQKEALNIRLN-------IEQIDSHIAEHQSKIKYWQKEITKIS---LHK 1040
Query: 1015 LEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEMVALLEAQLKELNPNLDSITEYRRKV 1074
+E I PE++ LA + L D + + +ALLEA+ E+ PNL +I EY++K
Sbjct: 1041 IEDI------PEEVLPGLAQEELEAIKDPDQIINQIALLEAKSHEMKPNLGAIAEYKKKE 1094
Query: 1075 AAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAE 1134
Y +RV +L +T +RD ++ Y++ RK+RL+EFMAGFN I+ KLKE YQM+TLGGDAE
Sbjct: 1095 ELYLQRVAELDEITNERDSFRRAYEDLRKQRLNEFMAGFNIITNKLKENYQMLTLGGDAE 1154
Query: 1135 LELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDE 1194
LELVDSLDPFSEG++FSVRPPKKSWK I NLSGGEKTLSSLALVFALHHYKPTPLY MDE
Sbjct: 1155 LELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDE 1214
Query: 1195 IDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINP 1253
IDAALDFKNVSIV Y+ ++TK+AQFIIISLRNNMFE+ADRL+GIYKT N TKS+ NP
Sbjct: 1215 IDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLIGIYKTHNTTKSVATNP 1273
>sp|Q9NTJ3|SMC4_HUMAN Structural maintenance of chromosomes protein 4 OS=Homo sapiens
GN=SMC4 PE=1 SV=2
Length = 1288
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/1264 (40%), Positives = 741/1264 (58%), Gaps = 92/1264 (7%)
Query: 18 PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRL 77
PRL I +V +NFKSYAGE+ +GPFHK FS ++GPNGSGKSNVID+MLFVFG RA+++R
Sbjct: 80 PRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRS 139
Query: 78 NKVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYI 137
K+S LIHNS ++++ S V VHFQ+I+D + YE I S+F +SR A RDN+S Y+I
Sbjct: 140 KKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHI 199
Query: 138 NDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIG 197
+ + F +V L+ G+DLD+NRFLILQGEVEQI++MKPKGQ HDEG LEYLEDIIG
Sbjct: 200 SGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIG 259
Query: 198 TDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLN-WQRKKEIAWRFVCVS--VLD 254
R E I + +L + G + V ++ K + + +K IA F+ + +
Sbjct: 260 CGRLNEPIKVLCRRVEILNEHRG--EKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFR 317
Query: 255 VKNEAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLK--NEREKIQDN 312
KN Y + EL +I E++ K+ E+ K NE+ I N
Sbjct: 318 KKNHVCQYYIYELQK-----------------RIAEMETQKEKIHEDTKEINEKSNILSN 360
Query: 313 -----NKTLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKIKK 367
NK +K+ E NK + EE +KE+F + + +DV+ RE KH K KK
Sbjct: 361 EMKAKNKDVKDTEKKLNKITKFIEE-------NKEKFTQLDLEDVQVREKLKHATSKAKK 413
Query: 368 LEVKVEKDSSKIDDLTKECEHATNQIPKLEENIPKLLKLFENVFIADTQNIITFPFMNMI 427
LE +++KD K+++ IP NI N + + M
Sbjct: 414 LEKQLQKDKEKVEEF--------KSIPAKSNNIINETTTRNNALEKEKEKEEKKLKEVMD 465
Query: 428 NLCVETERYRSELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEKHEAGRKAFEDAQR 487
+L ET+ + E + EL + K + + K++V +E + +H A+
Sbjct: 466 SLKQETQGLQKEKESREKELMGFSKSVNEARSKMDVAQSELDIYLSRHNTAVSQLTKAKE 525
Query: 488 QMDDILRRIDTKTTAIRNMQGDLEKNKLEAMEAHNVEQECFKEQETLIPLEQAARQKVAE 547
+ + + AIR+++G L + + E E Q+ +E+ L QKV E
Sbjct: 526 ALIAASETLKERKAAIRDIEGKLPQTEQELKEKEKELQKLTQEETNFKSLVHDLFQKVEE 585
Query: 548 LKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVSTACPGLDYIVV 607
KS + +S+G VL AI+Q K+S +I GIYGR+GDLGAID KYD+A+S+ C LDYIVV
Sbjct: 586 AKSSLAMNRSRGKVLDAIIQEKKSGRIPGIYGRLGDLGAIDEKYDVAISSCCHALDYIVV 645
Query: 608 ETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTPENVPRLFDLIKVKDERM 667
++ AQ CV L+R+ +GVATF+ L+K KM E TPEN PRLFDL+KVKDE++
Sbjct: 646 DSIDIAQECVNFLKRQNIGVATFIGLDKMAVWAKKMTE-IQTPENTPRLFDLVKVKDEKI 704
Query: 668 KLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKM 727
+ AFY A+ +TLVA +LDQATR+AY ++ +R VVTL G + E+SGTM+GGGSK G+M
Sbjct: 705 RQAFYFALRDTLVADNLDQATRVAYQKDRRWR-VVTLQGQIIEQSGTMTGGGSKVMKGRM 763
Query: 728 GTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHYQASEKAVA--HLEME--- 782
G+S+ +S E + E +L N S+ +I + + Q E+ V H E E
Sbjct: 764 GSSL-VIEISEEEVNKMESQLQ----NDSKKAMQIQE--QKVQLEERVVKLRHSEREMRN 816
Query: 783 -LAKSRKEIESLKSQHSYLEKQLDSLKA---ASEPRKDEIDRLEELQKIISAEEKEIEKI 838
L K I+ L Q YL Q+ L+A A+ P K + LEE +SA + E + +
Sbjct: 817 TLEKFTASIQRLIEQEEYLNVQVKELEANVLATAPDKKKQKLLEE---NVSAFKTEYDAV 873
Query: 839 VNGSKDLKEKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRHKVQIETAQKM 898
+ ++ + +L + + KLKAQ+ K+DKI +D+ ++ I + +V I+TA +
Sbjct: 874 AEKAGKVEAEVKRLHNTIVEINNHKLKAQQDKLDKINKQLDECASAITKAQVAIKTADRN 933
Query: 899 IKKLT-------KGIAESKKEKEQLVEERVKMERIFDEILEKAHNVQEHYTNTQKLIDQH 951
++K K I +++KE + L E +E E+++ + +E QK +H
Sbjct: 934 LQKAQDSVLRTEKEIKDTEKEVDDLTAELKSLEDKAAEVVKNTNAAEESLPEIQK---EH 990
Query: 952 RDVLDKAKNDYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITL 1011
R++L + K +++ L+ + KL+ + E + K + K + + +
Sbjct: 991 RNLLQELK----VIQENEHALQKDALSIKLKLEQIDGHIAEHNSKIKYWHKEISKISLHP 1046
Query: 1012 LKH--LEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEMVALLEAQLKELNPNLDSITE 1069
++ +E+I ++ PE L+A ++++ +ALLEA+ E+ PNL +I E
Sbjct: 1047 IEDNPIEEI--SVLSPEDLEAIKNPDSITN---------QIALLEARCHEMKPNLGAIAE 1095
Query: 1070 YRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITL 1129
Y++K Y +RV +L +T +RD ++ Y++ RK+RL+EFMAGF I+ KLKE YQM+TL
Sbjct: 1096 YKKKEELYLQRVAELDKITYERDSFRQAYEDLRKQRLNEFMAGFYIITNKLKENYQMLTL 1155
Query: 1130 GGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPL 1189
GGDAELELVDSLDPFSEG++FSVRPPKKSWK I NLSGGEKTLSSLALVFALHHYKPTPL
Sbjct: 1156 GGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPL 1215
Query: 1190 YVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSI 1249
Y MDEIDAALDFKNVSIV Y+ ++TK+AQFIIISLRNNMFE++DRL+GIYKT N TKS+
Sbjct: 1216 YFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGIYKTYNITKSV 1275
Query: 1250 TINP 1253
+NP
Sbjct: 1276 AVNP 1279
>sp|Q8CG47|SMC4_MOUSE Structural maintenance of chromosomes protein 4 OS=Mus musculus
GN=Smc4 PE=1 SV=1
Length = 1286
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/1255 (39%), Positives = 740/1255 (58%), Gaps = 74/1255 (5%)
Query: 18 PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRL 77
PRL I +V +NFKSYAGE+ +GPFHK FS ++GPNGSGKSNVID+MLFVFG RA+++R
Sbjct: 78 PRLMITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRS 137
Query: 78 NKVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYI 137
K+S LIHNS ++++ S V VHFQ+I+D + YE + S+F +SR A+RD++S Y+I
Sbjct: 138 KKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVLPNSNFYVSRTAYRDSTSVYHI 197
Query: 138 NDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIG 197
+ + F +V L+ G+DLD+NRFLILQGEVEQI++MKPKGQ HDEG LEYLEDIIG
Sbjct: 198 SGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIG 257
Query: 198 TDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLN-WQRKKEIAWRFVCVSVLDVK 256
R E I + +L + G + V ++ K + + +K IA F L ++
Sbjct: 258 CGRLNEPIKVLCRRVEILNEHRG--EKLNRVKMVEKEKDALEGEKNIAIEF-----LTLE 310
Query: 257 NEAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNEREK-------I 309
NE + K + D +I E+ K+ E+ K EK +
Sbjct: 311 NE----------MFKKKNHICQYYIYDLQNRIAEITTQKEKIHEDTKEITEKSNVLSNEM 360
Query: 310 QDNNKTLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKIKKLE 369
+ N +K++E NK + E+ +KE+F + + +DV+ RE KH K KKLE
Sbjct: 361 KAKNSAVKDVEKKLNKVTKFIEQ-------NKEKFTQLDLEDVQVREKLKHATSKAKKLE 413
Query: 370 VKVEKDSSKIDDLTKECEHATNQIPKLEENIPKLLKLFENVFIADTQNIITFPFMNMINL 429
+++KD K+++L +P + + N + + M +L
Sbjct: 414 KQLQKDKEKVEEL--------KSVPAKSKTVINETTTRNNSLEKEREKEEKKLKEVMDSL 465
Query: 430 CVETERYRSELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEKHEAGRKAFEDAQRQM 489
ET+ + E EL + K + + K+EV +E + +H A+ +
Sbjct: 466 KQETQGLQKEKEIQEKELMGFNKSVNEARSKMEVAQSELDIYLSRHNTAVSQLSKAKEAL 525
Query: 490 DDILRRIDTKTTAIRNMQGDLEKNKLEAMEAHNVEQECFKEQETLIPLEQAARQKVAELK 549
+ + AI+++ L + + E E Q+ +E+ L L QKV E K
Sbjct: 526 ITASETLKERKAAIKDINTKLPQTQQELKEKEKELQKLTQEEINLKSLVHDLFQKVEEAK 585
Query: 550 SVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVSTACPGLDYIVVET 609
S + +S+G VL AI+Q K+S +I GIYGR+GDLGAID KYDIA+S+ C LDYIVV++
Sbjct: 586 SSLAMNRSRGKVLDAIIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDS 645
Query: 610 TSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTPENVPRLFDLIKVKDERMKL 669
AQ CV L++ +G+ATF+ L+K KM + TPEN PRLFDL+KVK+E ++
Sbjct: 646 IDTAQECVNFLKKHNIGIATFIGLDKMTVWAKKMSK-IQTPENTPRLFDLVKVKNEEIRQ 704
Query: 670 AFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGT 729
AFY A+ +TLVA +LDQATR+AY ++ +R VVTL G + E+SGTMSGGGSK G+MG+
Sbjct: 705 AFYFALRDTLVANNLDQATRVAYQRDRRWR-VVTLQGQIIEQSGTMSGGGSKVMRGRMGS 763
Query: 730 SIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHYQASEKAVAHLEME----LAK 785
S+ +S E + E +L +I+++ V+H +A K + H E + L K
Sbjct: 764 SV-IDEISVEEVNKMESQLERHSKQAMQIQEQ---KVQHEEAVVK-LRHSERDMRNTLEK 818
Query: 786 SRKEIESLKSQHSYLEKQLDSLKA---ASEPRKDEIDRLEELQKIISAEEKEIEKIVNGS 842
I+ L Q YL Q+ L+A + P + + LEE +S +KE + + +
Sbjct: 819 FAASIQGLSEQEEYLCVQIKELEANVLTTAPDRKQQKLLEE---NVSVFKKEYDAVAEKA 875
Query: 843 KDLKEKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRHKVQIETAQKMIKKL 902
++ + +L + + + KLKAQ+ K+D I +D+ ++ I + +V I+TA + +KK
Sbjct: 876 GKVEAEIKRLHNTIIDINNRKLKAQQNKLDTINKQLDECASAITKAQVAIKTADRNLKKA 935
Query: 903 TKGIAESKKE----KEQLVEERVKMERIFDEILEKAHNVQEHYTNTQKLIDQHRDVLDKA 958
+ ++KE ++++ + + +++ I D+ E +N + T+ ++ +HR++L +
Sbjct: 936 QDSVCRTEKEIKDTEKEINDLKTELKNIEDKAEEVINNTKTAETSLPEIQKEHRNLLQEL 995
Query: 959 KNDYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITLLKHLEQI 1018
K +++ L+ + KL+ + E + K ++K + +++ ++
Sbjct: 996 K----VIQENEHALQKDALSIKLKLEQIDGHISEHNSKIKYWQKEISKIKLHPVED---- 1047
Query: 1019 QKDLVDPEKLQATLADQTLSDACDLKRTLEMVALLEAQLKELNPNLDSITEYRRKVAAYN 1078
+P + A L+ + L + + +ALLEAQ +E+ PNL +I EY++K Y
Sbjct: 1048 -----NPVETVAVLSQEELEAIKNPESITNEIALLEAQCREMKPNLGAIAEYKKKEDLYL 1102
Query: 1079 ERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELELV 1138
+RV +L +T +RD+ ++ Y++ RK+RL+EFMAGF I+ KLKE YQM+TLGGDAELELV
Sbjct: 1103 QRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVITNKLKENYQMLTLGGDAELELV 1162
Query: 1139 DSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAA 1198
DSLDPFSEG++FSVRPPKKSWK I NLSGGEKTLSSLALVFALHHYKPTPLY MDEIDAA
Sbjct: 1163 DSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAA 1222
Query: 1199 LDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINP 1253
LDFKNVSIV Y+ ++TK+AQFIIISLRNNMFE++DRL+GIYKT N TKS+ +NP
Sbjct: 1223 LDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGIYKTYNSTKSVAVNP 1277
>sp|Q9ERA5|SMC4_MICAR Structural maintenance of chromosomes protein 4 (Fragment)
OS=Microtus arvalis GN=SMC4 PE=2 SV=1
Length = 1243
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/1262 (39%), Positives = 730/1262 (57%), Gaps = 88/1262 (6%)
Query: 18 PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRL 77
PRL I +V +NFKS AGE+ +GPFHK FS ++GPNGSGKSNVID+MLFVFG RA+++R
Sbjct: 35 PRLMITHIVNQNFKSCAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRS 94
Query: 78 NKVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYI 137
K+S LIHNS ++++ S V VHFQ+I+D + YE I S+F +SR A+RDN+S Y+I
Sbjct: 95 KKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFCVSRTAYRDNTSVYHI 154
Query: 138 NDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIG 197
+ + F +V L+ G+DLD+NRFLILQGEVEQI++MKPKGQ HDEG LEYLEDIIG
Sbjct: 155 SGKKRTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIG 214
Query: 198 TDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIAWRFVCV-----SV 252
R LN ++ + + LN R +++ R V +V
Sbjct: 215 CGR--------------------LNEPIKVLCRRVEILNENRGEKLN-RVKMVEKEKDAV 253
Query: 253 LDVKNEAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNEREK---- 308
KN A ++ E + K + D +I E++ K+ E+ K EK
Sbjct: 254 EGEKNIAIEFLTLEKEMFKKKNHVCQYYIYDLQKRIDEMKTQKEKIHEDTKEITEKSNML 313
Query: 309 ---IQDNNKTLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKI 365
++ N +K++E +K + EE +KE+F++ + +DV+ RE KH K
Sbjct: 314 SNEMKAKNSAVKDIEKKLHKATKFIEE-------NKEKFRQLDLEDVQVREKLKHATSKA 366
Query: 366 KKLEVKVEKDSSKIDDLTKECEHATNQIPKLEENIPKLLKLFENVFIADTQNIITFPFMN 425
KKLE +++KD K+++L IP + I + + +
Sbjct: 367 KKLEKQLQKDKEKVEEL--------KSIPAKSKTIINETTTKSSSLEKEKEKEEKKLKEV 418
Query: 426 MINLCVETERYRSELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEKHEAGRKAFEDA 485
M +L ET+ + E EL + K + + K+EV +E + +H A
Sbjct: 419 MDSLKQETQGLQKEKEDQEKELMGFNKSVNEARSKMEVAQSELDIYLSRHNTAVSQLSKA 478
Query: 486 QRQMDDILRRIDTKTTAIRNMQGDLEKNKLEAMEAHNVEQECFKEQETLIPLEQAARQKV 545
+ + + + AI + L + + E E Q+ +E+ L L QKV
Sbjct: 479 KETLITASETLKERKAAIGEINTKLPQTQQELKEKEKELQKLTQEEINLKSLVHDLFQKV 538
Query: 546 AELKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVSTACPGLDYI 605
E KS + +S+G VL AI+Q K+S +I GIYGR+GDLGAID KYDIA+S+ C LDYI
Sbjct: 539 EEAKSSLAMNRSRGKVLDAIIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYI 598
Query: 606 VVETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTPENVPRLFDLIKVKDE 665
VV++ AQ CV L+R +GVATF+ L+K KM + TPEN PRLFDL+K K+E
Sbjct: 599 VVDSIDTAQECVNFLKRHNIGVATFIGLDKMTVWAKKMAK-IQTPENTPRLFDLVKAKNE 657
Query: 666 RMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGG 725
++ AFY A+ +TLVA +LDQATR+AY ++ +R VVTL G + E+SGTM+GGGSK G
Sbjct: 658 EIRQAFYFALRDTLVADNLDQATRVAYQKDRRWR-VVTLQGQIIEQSGTMTGGGSKVMRG 716
Query: 726 KMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHYQASEKAVAHLEME--- 782
+MG+S+ +S E + E +L RI+++ V+H + K + H E E
Sbjct: 717 RMGSSV-IVEISEEEVNKMESQLQKHSKQARRIQEQ---KVQHEERVVK-LRHSEREMRN 771
Query: 783 -LAKSRKEIESLKSQHSYLEKQLDSLKA---ASEPRKDEIDRLEELQKIISAEEKEIEKI 838
L K I+ L Q YL Q+ L+A + P K + LEE +SA +KE + +
Sbjct: 772 TLEKFAASIQGLSDQEEYLTVQIKELEANVLTTAPDKKKQKLLEEN---VSAFKKEYDAV 828
Query: 839 VNGSKDLKEKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRHKVQIETA--- 895
+ ++ + +L + KLKAQ+ K+D I +D+ ++ I + +V I+TA
Sbjct: 829 AEKAGKVEAEVKRLHDTIIEINNRKLKAQQNKLDMINKQLDECASAITKAQVAIKTADRN 888
Query: 896 ----QKMIKKLTKGIAESKKEKEQLVEERVKMERIFDEILEKAHNVQEHYTNTQKLIDQH 951
Q + + K I +++KE L E +E +E+++K + +E QK +H
Sbjct: 889 LIKAQDSVVRTEKEIKDTEKETNDLKAELKAIEDKAEEVIKKTNAAEESLPEIQK---EH 945
Query: 952 RDVLDKAKNDYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITL 1011
R++L + K +++ L+ + KL+ + E + K ++K + +++
Sbjct: 946 RNLLQELK----VIQENEHALQKDALSIKLKLEQIDGHIAEHNSKIKYWQKEISKIKLHP 1001
Query: 1012 LKHLEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEMVALLEAQLKELNPNLDSITEYR 1071
++ ++ PE L+A ++++ +A+LEAQ E+ PNL +I EY+
Sbjct: 1002 IEDNPVETVSVLSPEDLEAIKNPDSITN---------QIAILEAQCHEMKPNLGAIAEYK 1052
Query: 1072 RKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGG 1131
+K Y +RV +L +T +RD+ ++ Y++ RK+RL+EFMAGF I+ KLKE YQM+TLGG
Sbjct: 1053 KKEELYLQRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYIITNKLKENYQMLTLGG 1112
Query: 1132 DAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYV 1191
DAELELVDSLDPFSEG++FSVRPPKKSWK I NLSGGEKTLSSLALVFALHHYKPTPLY
Sbjct: 1113 DAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYF 1172
Query: 1192 MDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITI 1251
MDEIDAALDFKNVSIV Y+ ++TK+AQFIIISLRNNMFE++DRL+GIYKT N TKS+ +
Sbjct: 1173 MDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGIYKTYNITKSVAV 1232
Query: 1252 NP 1253
NP
Sbjct: 1233 NP 1234
>sp|Q12267|SMC4_YEAST Structural maintenance of chromosomes protein 4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SMC4 PE=1 SV=1
Length = 1418
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/1317 (37%), Positives = 740/1317 (56%), Gaps = 122/1317 (9%)
Query: 8 DSASPGSRKWPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFV 67
D S++ RLFI E+V+ NFKSYAG+Q VGPFH SFSAVVGPNGSGKSNVID+MLFV
Sbjct: 142 DRHQSSSKQQSRLFINELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFV 201
Query: 68 FGKRAKQMRLNKVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQ-GSDFVISRV 126
FG RA +MR +++S+LIH S + +L S V+VHFQ ++D GT + +I+R
Sbjct: 202 FGFRANKMRQDRLSDLIHKSEAFPSLQSCSVAVHFQYVIDESSGTSRIDEEKPGLIITRK 261
Query: 127 AFRDNSSKYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDE 186
AF++NSSKYYIN++ S++TEVTK LK +G+DLD+ RFLILQGEVE I+ MKPK + D+
Sbjct: 262 AFKNNSSKYYINEKESSYTEVTKLLKNEGIDLDHKRFLILQGEVENIAQMKPKAEKESDD 321
Query: 187 GFLEYLEDIIGTDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIAWR 246
G LEYLEDIIGT Y I+E L + + L R V + + + KE A
Sbjct: 322 GLLEYLEDIIGTANYKPLIEERMGQIENLNE-VCLEKENRFEIVDREKNSLESGKETALE 380
Query: 247 FVCVSVLDVKNEAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNER 306
F+ E E K+L+LL+ K ++ K+ E +S ++L++E+
Sbjct: 381 FL---------EKE----KQLTLLR--SKLFQFKLLQSNSKLASTLEKISSSNKDLEDEK 425
Query: 307 EKIQDNNKTLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKIK 366
K Q++ K + E+++ + R + + E +E E V E +K++ K++
Sbjct: 426 MKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKME 485
Query: 367 KLEVKVEKDSSKIDDLTKECEHATNQIPKLEENIPKLLKLFE--NVFIADTQNIITFPFM 424
K E ++ I + E Q + E I L +L E + D +
Sbjct: 486 KAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIK-------- 537
Query: 425 NMINLCVETERYRSELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEKHEAGRKAFED 484
++L +T+ +E+ ELEPW+ +L + ++++ +E LL E +K E
Sbjct: 538 --LSLKDKTKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVET 595
Query: 485 AQ----------RQMDDILRRIDTKTTAIRNMQGDLEKNKLEAMEAHNVEQECFKEQETL 534
+ +++ D++ + K ++++ + EKN AH KE + +
Sbjct: 596 LEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKN---FTSAH----LKLKEMQKV 648
Query: 535 IPLEQAARQKVAELKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIA 594
+ A RQ+ E +S + +++ VL A+ + ++S +I G +GR+GDLG ID +D+A
Sbjct: 649 L---NAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSGRINGFHGRLGDLGVIDDSFDVA 705
Query: 595 VSTACPGLDYIVVETTSAAQACVELLRREKLGVATFMILEK--QVDLFPKMKEHFSTPEN 652
+STACP LD +VV+T AQ C++ LR+ KLG A F++L++ Q +L P STPEN
Sbjct: 706 ISTACPRLDDVVVDTVECAQHCIDYLRKNKLGYARFILLDRLRQFNLQP-----ISTPEN 760
Query: 653 VPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKS 712
VPRLFDL+K K+ + AFY+ + +TLVA++L QA +AY G K FR VVT+DG L + S
Sbjct: 761 VPRLFDLVKPKNPKFSNAFYSVLRDTLVAQNLKQANNVAY-GKKRFR-VVTVDGKLIDIS 818
Query: 713 GTMSGGGSKPRGG--KMGT--SIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKH 768
GTMSGGG+ G K+GT S + + E + E+ELS +N + + +
Sbjct: 819 GTMSGGGNHVAKGLMKLGTNQSDKVDDYTPEEVDKIERELSERENNFRVASDTVHEMEEE 878
Query: 769 YQASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQLDSLKAASEPRKDEIDRLEELQKII 828
+ LE +++K+ E +SL S+ + E+Q+ + A + +L + K +
Sbjct: 879 LKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSDKAQLNVVMKNL 938
Query: 829 SAEEKEIEKIVNGSKDLKEKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRH 888
E + + +K KEK LQ ++ GG KL+ Q KV+ + +D ++ +
Sbjct: 939 ERLRGEYNDLQSETKTKKEKIKGLQDEIMKIGGIKLQMQNSKVESVCQKLDILVAKLKKV 998
Query: 889 KVQIETAQKMIKKLTKGIAESKKEKE------QLVEERVKMERIFDEILEKAHNVQEHYT 942
K + + + K K + S+++ E +++EE++K ++ + E N+ E
Sbjct: 999 KSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKL--ALAENDTNMNETLN 1056
Query: 943 NTQKLIDQHRDVLDKAKNDYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKK 1002
+L +Q ++ K E ++++++E ++ EIE KL+ L ++ +K
Sbjct: 1057 LKVELKEQS----EQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEITQQEK 1112
Query: 1003 RLDDLQITLLKH---------LEQIQKDLVDPEKLQA------TLADQTLSDA---CDLK 1044
L++L I + H ++ +++D+ + ++L T + + DA CD
Sbjct: 1113 GLNELSIRDVTHTLGMLDDNKMDSVKEDVKNNQELDQEYRSCETQDESEIKDAETSCDNY 1172
Query: 1045 RTLEM-----------------------VALLEAQLKEL-------NPNLDSITEYRRKV 1074
+ + V L+E+++ EL N ++ + EY R++
Sbjct: 1173 HPMNIDETSDEVSRGIPRLSEDELRELDVELIESKINELSYYVEETNVDIGVLEEYARRL 1232
Query: 1075 AAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAE 1134
A + R DL Q+RD+VK+Q +KKR DEFMAGFN IS+ LKEMYQMIT+GG+AE
Sbjct: 1233 AEFKRRKLDLNNAVQKRDEVKEQLGILKKKRFDEFMAGFNIISMTLKEMYQMITMGGNAE 1292
Query: 1135 LELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDE 1194
LELVDSLDPFSEGV FSV PPKKSW+NI NLSGGEKTLSSLALVFALH YKPTPLYVMDE
Sbjct: 1293 LELVDSLDPFSEGVTFSVMPPKKSWRNITNLSGGEKTLSSLALVFALHKYKPTPLYVMDE 1352
Query: 1195 IDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITI 1251
IDAALDF+NVSIV +Y+K+RTK+AQFI+ISLRNNMFELA +LVG+YK DN TKS TI
Sbjct: 1353 IDAALDFRNVSIVANYIKERTKNAQFIVISLRNNMFELAQQLVGVYKRDNRTKSTTI 1409
>sp|P41004|SMC4_SCHPO Structural maintenance of chromosomes protein 4
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cut3 PE=1 SV=2
Length = 1324
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/1299 (35%), Positives = 707/1299 (54%), Gaps = 167/1299 (12%)
Query: 18 PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRL 77
PRL + E+ + NFKSYAG Q VGPFH SFS++VGPNGSGKSNVIDA+LFVFG RA ++R
Sbjct: 122 PRLVVYELRLTNFKSYAGTQIVGPFHPSFSSIVGPNGSGKSNVIDALLFVFGFRASKLRQ 181
Query: 78 NKVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYI 137
+K S LIH S + +LDS V + F+E+ D TY + GS+ + R A+++N+SKY++
Sbjct: 182 SKASALIHKSATHPSLDSCDVEITFKEVNS--DFTY--VDGSELTVRRTAYKNNTSKYFV 237
Query: 138 NDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIG 197
N S+F+ V+ LK KG+DL++ RFLILQGEVE I+ MKP+ D+G LEYLEDIIG
Sbjct: 238 NGVESSFSAVSNLLKEKGIDLNHKRFLILQGEVESIAQMKPRAISEGDDGLLEYLEDIIG 297
Query: 198 TDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIAWRFVCVSVLDVKN 257
T +Y I+E+ ++ D+ S R VL + + K F+ K+
Sbjct: 298 TSKYKPIIEENMQELSNSDDICAEKES-RLKLVLSEKAKLEDSKNSVLSFL-------KD 349
Query: 258 EAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNEREKIQDNNKTLK 317
E E +M K + + YE + K + +Q ++ LE L+ EK + + +
Sbjct: 350 ENELFM-------KQNQLYRTILYETRNKKTL-VQNLLNSLEGKLQAHLEKFEQTERDIS 401
Query: 318 ELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYRE--------------------- 356
E + ++ ND K+ + +E+Q VK E
Sbjct: 402 EKNEEVKSLREKAAKVKNDCTSEKKTRQSYEQQTVKIEEQLKFLLNKEKKLKKSIEALSF 461
Query: 357 --------------DSKHMKQKIKKLEVKVEKDSSKIDDLTKECEHATNQIPK-LEENIP 401
DS+ + +I L ++++++ +DD+ K + T I +EE
Sbjct: 462 EKSEAENSLSSHDIDSQKLNSEIADLSLRLQQEELSLDDIRKSLQGKTEGISNAIEEKQK 521
Query: 402 KLLKLFENVFIADTQNIITFPFMNMI-----NLCVETERYRSELATVRAELEPWEKELIV 456
+ E + ++ I ++M+ +L + E +S L +R + E L
Sbjct: 522 AMAPALEKINQLTSEKQILQVELDMLLNKENDLINDVESSQSSLDKLRNDAEENRNIL-- 579
Query: 457 HKGKLEVTCTESKLLCEKHEAGRKAFEDAQRQMDDILRRIDTKTTAIRNMQGDLEKNKLE 516
SKL K D + + D+ + I+ K + N +L N
Sbjct: 580 ----------SSKL---------KVLSDLKGEKKDVSKNIERKKETVHNTYRNLMSN--- 617
Query: 517 AMEAHNVEQECFKEQETLIPLEQAARQKVAELKSVMDSEKSQGSVLKAILQAKESNQIEG 576
R K+ E+K+ + S +S+G+VL+++ + ES+ + G
Sbjct: 618 -------------------------RTKLEEMKASLSSSRSRGNVLESLQRLHESDNLNG 652
Query: 577 IYGRMGDLGAIDAKYDIAVSTACPGLDYIVVETTSAAQACVELLRREKLGVATFMILEKQ 636
+GR+GDL ID YD+A+STACP L++IVV+ Q CV LR LG A+F+IL+
Sbjct: 653 FFGRLGDLATIDEAYDVAISTACPALNHIVVDNIETGQKCVAFLRSNNLGRASFIILK-- 710
Query: 637 VDLFPKMKEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNK 696
+L K TPENVPRLFDL++ D++ AFY + NTLVAK+L+QA RIAY K
Sbjct: 711 -ELAQKNLARIQTPENVPRLFDLLRFNDQKFAPAFYNVLQNTLVAKNLEQANRIAYG--K 767
Query: 697 EFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVDNLS 756
RVVTL G L +KSGTM+GGG++ + G M ++I + VS ++ +K++ + D +
Sbjct: 768 TRWRVVTLSGQLIDKSGTMTGGGTRVKKGGMSSAI-TSDVSPASVETCDKQVQ-LED--T 823
Query: 757 RIRQKIADA----VKHYQASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQLDSLKAASE 812
R RQ +++ + + SE+ + E+E++K + ++ + + E+++ LK+ +
Sbjct: 824 RYRQHLSELESLNQRFTEISER-IPSAELEISKLQLDVSACDRLVAGEERRILQLKSDLK 882
Query: 813 PRKDEIDRLEELQKIISAEEKEIEKIVNGSKDLKEKALQLQSKVENAGGEKLKAQKLKVD 872
++ +R LQ IS +KE+E I ++ L + LQ K+ GG + + QK KVD
Sbjct: 883 SIRNNNERKRNLQNKISNMDKEVEAININNEGLVTEIKTLQDKIMEIGGIRYRIQKSKVD 942
Query: 873 KIQSDIDKSSTEINRHKVQIETAQKMIK-KLTKGIAESKKEKEQLVEERVKMERI---FD 928
+ + K +K KL K + KK +++ +V++ + +D
Sbjct: 943 DLHEQL------------------KFVKDKLNKMSFKKKKNEQRSQSFQVELSNLTSEYD 984
Query: 929 EILEKAHNVQEHYTNTQKLIDQHRDVLDKAKNDYEKLKKTVDEL--------------RA 974
E ++ + K +D+H+ L + +N + ++DEL +A
Sbjct: 985 TTTESIATLKTELQSLNKYVDEHKSRLREFENALWDINSSIDELVKFIEFESKQMNSVKA 1044
Query: 975 SEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQI-TLLKHLEQIQKDLVDPEKLQATLA 1033
IE + ++Q+ + + E+ Y K + +L++ L + +Q D PE + L+
Sbjct: 1045 ERIELENQIQEQRTALSEVGNNENKYLKLMSNLKLHNLTEFCDQTTMDSTFPEYSEDELS 1104
Query: 1034 DQTLSDACDLKRTLEMVALLEAQLKELNPNLDSITEYRRKVAAYNERVEDLTTVTQQRDD 1093
+ D + +++L+ + ++ +++ ++EYRR +R D + Q+R D
Sbjct: 1105 ------SVDKSELVSNISVLKKKTEDREVDINVLSEYRRCNKEAEKRDSDYQSELQKRTD 1158
Query: 1094 VKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVR 1153
+KK + + +RLDEFM GF IS+KLKEMYQ+IT+GG+AELELVDSLDPFSEGV+FSV
Sbjct: 1159 LKKVVTDLQSQRLDEFMYGFGIISMKLKEMYQIITMGGNAELELVDSLDPFSEGVLFSVM 1218
Query: 1154 PPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKD 1213
PPKKSWKNI+NLSGGEKTLSSLALVFALH+YKPTPLYVMDEIDAALDFKNVSIV +Y+K+
Sbjct: 1219 PPKKSWKNISNLSGGEKTLSSLALVFALHNYKPTPLYVMDEIDAALDFKNVSIVANYIKE 1278
Query: 1214 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITIN 1252
RTK+AQFI+ISLR+NMFEL+ RLVGIYKT N TKS+TIN
Sbjct: 1279 RTKNAQFIVISLRSNMFELSSRLVGIYKTANMTKSVTIN 1317
>sp|Q20060|SMC4_CAEEL Structural maintenance of chromosomes protein 4 OS=Caenorhabditis
elegans GN=smc-4 PE=1 SV=1
Length = 1549
Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust.
Identities = 418/1336 (31%), Positives = 671/1336 (50%), Gaps = 143/1336 (10%)
Query: 19 RLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLN 78
RL I+ + + NFKSY G+ +GPFHKSF++++GPNGSGKSN+ID++LFVFG RA ++R
Sbjct: 89 RLMIRNVEVDNFKSYFGKASIGPFHKSFTSIIGPNGSGKSNLIDSLLFVFGFRASKIRSA 148
Query: 79 KVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYIN 138
KVS LIH S +N D V++HFQ IVD+ G YE ++ S+F ISR AF++NSS Y I+
Sbjct: 149 KVSNLIHKSAG-RNPDKCTVTIHFQRIVDIP-GHYEVVKDSEFTISRTAFQNNSSSYAID 206
Query: 139 DRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIGT 198
RP+ EV +L+ +D+++NRFLILQGEVEQI++MKP + G +EYLEDIIGT
Sbjct: 207 GRPATKNEVEARLRRVDIDIEHNRFLILQGEVEQIAMMKPVKTTKSETGMVEYLEDIIGT 266
Query: 199 DRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIAWRFVCVSVLDVKNE 258
+R + +V LF R V L L+ QR R V++ +
Sbjct: 267 NRL--------EPFVKLF--------QRRVNRLTCDLSQQRIARDHARNSKVAMENPVRA 310
Query: 259 AEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNEREKIQDNNKTLKE 318
A +++KE K + KI Q + K++E +K+ E + N K+
Sbjct: 311 AIEFLMKENEATTIHMKLEQRRRQRYLDKIAPKQAELDKMKEEMKSIAETLDTNKNEYKQ 370
Query: 319 LESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKIKKLEVKVEKDSSK 378
E + + +LD + +E + ++ + +E K + I K E + EK+ K
Sbjct: 371 SEEAQKVMIEERSKLDKNFDSLSKELSDLGTEETRRKEALKRHQANISKAEAEKEKEVKK 430
Query: 379 IDDLTKECEHATNQIPKLEENIPKLLKLFENVFIADTQNIITFPFMNMINLCVETERYRS 438
+L E A +I K +E + +LL++ + +N+ F +E +
Sbjct: 431 RSNLEAAPEKAERKIAKCQEEVEQLLEIEKTANEEADKNLDEFE--------KRSEAPKE 482
Query: 439 ELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEKHEAGRKAFEDAQRQMDDILRRIDT 498
E ++ E W ++ + E+++ E E +K ++ ++ +R+++
Sbjct: 483 EQKKIQ---ETWAQK----SNEFNKVRGEARIAREDFEDLKKLANSGTDKLIELKKRLES 535
Query: 499 KTTAIRNMQGDLEKNKLEAMEAHNVEQECFKEQETLIP-LEQAARQKVAELKSVMD---- 553
+ + +L+K K E ++ N + K+ T +P L ARQK +L D
Sbjct: 536 SEESYAKEKDELDKLKPE-FDSWN---DKLKQLSTELPTLRNTARQKNQDLAKTRDRLET 591
Query: 554 ------SEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVSTACPG-LDYIV 606
S S V++A+++ KE+ +I+ +GR+GDLG ID KY+ A+ T L+Y++
Sbjct: 592 LRQQNSSCSSSNKVIQALMKEKEAGRIKSFHGRLGDLGVIDPKYEGAICTNFGARLNYLI 651
Query: 607 VETTSAAQACVELLRREKLGVATFMILEK----QVDLFPKMKEHFSTPENVPRLFDLIKV 662
V A+ + L KL T L+K + DL P + + P PRL DLI
Sbjct: 652 VGKEEDAKNVINFLVANKLPRQTVQPLDKIKCDKRDLAP----NPTNPLPAPRLIDLIDC 707
Query: 663 KDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSKP 722
D +K AFY + + +V +A R+ V TL+G++ SG+ +GGG
Sbjct: 708 -DPVLKPAFYDMVRSAIVGDSTQEAQRMHRMPACRGVTVCTLEGSMIHPSGSFTGGGKTV 766
Query: 723 RG------GKMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHYQASEKAV 776
+G KM + P +AE + AEK L + D ++ + + + + V
Sbjct: 767 KGLILTDKNKMAKQVTPEDKAAERDL-AEK-LGKLRDEADELKGQEHEMDGQLIEARRKV 824
Query: 777 AHLEMELAKSRKEIESLKSQHSYLEKQLDSLKAASEPRKDEIDRLEELQKIISAEEKEIE 836
A + L+ ++S L+K + + + + K + LE+ QKI+ EK+ +
Sbjct: 825 AEMSNRLSIVTSSVQSAAPAIETLKKTIANQEKEAAKVKVDAKTLEDKQKIVEELEKKRD 884
Query: 837 KIVNGSKDLKEKALQLQSKVENAGGEKLKAQK-------LKVDKIQSDIDKSSTEINRHK 889
++ + +K + ++QSK++ E ++ + K K++ DI K + I+
Sbjct: 885 ELGEEAAKVKARQAEIQSKLDGIFKELVQCHRDEAKESLQKRQKLEKDIAKETANISNSG 944
Query: 890 VQIETAQKMIKKLTKGIAESKKEKEQLVEERVKMERI---------FDEILEKAHNVQEH 940
I + I + K I + KK+ E+L+E+ + E + F++ ++K E
Sbjct: 945 RNIAKCDENISRHDKDIEKMKKKCEELMEKAIDDEEVKSKKETVERFEKQIKKLQTKGEE 1004
Query: 941 YTNTQKLIDQHRDVLD----KAKNDYEKLKKTV--DELRASEIEA--------------- 979
T Q + L+ K ++LK+++ D L+ +IE
Sbjct: 1005 MTKKQSELSAAETKLEGELKKCSEGIKELKESMLADRLKVEDIEKKLAALKVNRIPRFQF 1064
Query: 980 --------DYKLQ--------DLKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQKDLV 1023
D ++Q D +S +E+E + K + D L E QK L
Sbjct: 1065 LIESSRPEDLEMQIDDKMPVVDENQSPEEVERQKKHMACVMSDAAYAL--EFEMRQKVLE 1122
Query: 1024 DPEKLQAT----------LADQTLS-----DACDLKRTLEMVALLEAQLKELNPNLD--S 1066
+ E + L+D+ ++ DA +++ L++ E Q++ L +D S
Sbjct: 1123 NTESYENVDGEDRVPVELLSDEKINEISSRDAEEMQMKLKVC---EQQVEALKAKVDISS 1179
Query: 1067 ITEYRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQM 1126
I Y KV YNE+V LT T+ ++ ++ RL+EF + F I L +++M
Sbjct: 1180 IKAYVDKVKQYNEQVIKLTIATEVHRKHNQELQRIKQMRLEEFHSAFEFIGKHLVAVFKM 1239
Query: 1127 ITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKP 1186
+T GGDA+LE +D DPF +G+ F VRP KK+WK I LSGGEKTLSSLAL+FALH ++P
Sbjct: 1240 LTDGGDAKLEYIDKDDPFRQGISFMVRPAKKAWKQIQFLSGGEKTLSSLALIFALHMFRP 1299
Query: 1187 TPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCT 1246
TP YVMDEIDAALD++NVSI+ YV+ +T++AQFIIISLRNNMFELA+RLVGIYK D CT
Sbjct: 1300 TPFYVMDEIDAALDYRNVSIIAQYVRQKTENAQFIIISLRNNMFELANRLVGIYKVDGCT 1359
Query: 1247 KSITINPGSFTVCENA 1262
+++ I+P VCE A
Sbjct: 1360 RNVAIDP--LRVCEMA 1373
>sp|Q6Q1P4|SMC1_ARATH Structural maintenance of chromosomes protein 1 OS=Arabidopsis
thaliana GN=SMC1 PE=2 SV=2
Length = 1218
Score = 267 bits (683), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 329/1345 (24%), Positives = 619/1345 (46%), Gaps = 250/1345 (18%)
Query: 18 PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRL 77
P I ++ M NFKSY G Q VGPF K F+A++GPNGSGKSN++DA+ FV G R Q+R
Sbjct: 7 PSGKILQLEMENFKSYKGHQLVGPF-KDFTAIIGPNGSGKSNLMDAISFVLGVRTGQLRG 65
Query: 78 NKVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYI 137
+++ +LI+ + + ++ + G + + +DDG + +R S+Y I
Sbjct: 66 SQLKDLIY-AFDDRDKEQRGRKAFVRLVYQMDDGV-------ELRFTRSITSAGGSEYRI 117
Query: 138 NDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIG 197
++R N E KL+ G+ + FL+ QG+VE I+ PK LE+I G
Sbjct: 118 DNRVVNLDEYNGKLRSLGILVKARNFLVFQGDVESIASKNPKE-------LTGLLEEISG 170
Query: 198 TDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIAWRFVCVSVLDVKN 257
+ E++ + Y+ GL + + +Q+KK I K
Sbjct: 171 S----EELKKEYE---------GLEEKKASAEEKAALI-YQKKKTIGNEKKLKKA--QKE 214
Query: 258 EAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNEREKIQDNNKTLK 317
EAE + L+ QE+ L E ++ ++ ++ K E++ +E+ +D ++
Sbjct: 215 EAEKH-------LRLQEELKALKRERFLWQLYNIENDIEKANEDVDSEKSNRKD---VMR 264
Query: 318 ELESVHNKYMRRQEELDNDLR-VSKEEFKEFERQDV--KYREDSKHMKQKIKKLEVKVEK 374
ELE + +R+ E L+ +++ E K E+ K + + K++I +++ K+E
Sbjct: 265 ELEKFEREAGKRKVEQAKYLKEIAQREKKIAEKSSKLGKIQPELLRFKEEIARIKAKIET 324
Query: 375 DSSKIDDLTKECEHATNQIPKLEENIPKLLKLFE-----------NVFIADTQNIITFPF 423
+ +D KE + +I +++++I +L K E + + D+Q F
Sbjct: 325 NRKDVDKRKKEKGKHSKEIEQMQKSIKELNKKMELFNKKRQDSSGKLPMLDSQLQDYFRL 384
Query: 424 -----MNMINLCVETE----RYRSELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEK 474
M I L E E + R++L +R LE ++LI K L+
Sbjct: 385 KEEAGMKTIKLRDEHEVLERQRRTDLEALR-NLEENYQQLINRKNDLDEQI--------- 434
Query: 475 HEAGRKAFEDAQRQMDDILRRIDTKTTAIRNMQGDLEKNKLEAMEAHNVEQECFKEQETL 534
K F+D Q +++ + +TT+++ L++ + A EA
Sbjct: 435 -----KRFKDRQGEIETSSSKYKNETTSLKTELRALQEKHVNAREAS------------- 476
Query: 535 IPLEQAARQKVAELK---SVMDSEKSQGSVLKAILQAKESNQ--IEGIYGRMGDLGAID- 588
+ ++AEL+ S + +E+ + + QA ES + +G++GRM DL +
Sbjct: 477 ----AKLKTRIAELEDQLSDLTAERYENERDSRLTQAVESLKRLFQGVHGRMTDLCRPNR 532
Query: 589 AKYDIAVSTACPG-LDYIVVETTSAAQACVELLRREKLGVATFMILE----KQVDLFPKM 643
KY++AV+ A +D +VVE + + C++ L+ ++L TF+ L+ KQV F ++
Sbjct: 533 KKYNLAVTVAMGRFMDAVVVEDENTGKDCIKYLKEQRLPPMTFIPLQSVRVKQV--FERL 590
Query: 644 KEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVT 703
+ T + V FD+I+ E K YA +GNTLV +L++A +++SG E +VVT
Sbjct: 591 RNLGGTAKLV---FDVIQFDPELEKAVLYA-VGNTLVCDELEEAKVLSWSG--ERFKVVT 644
Query: 704 LDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQ--- 760
+DG L K+GTM+GG S K S + E + +++ ++N+ IR+
Sbjct: 645 VDGILLTKAGTMTGGTSGGMEAK---SNKWDDKKIEGLKKNKEDFEQQLENIGSIREMQM 701
Query: 761 -------KIADAVKHYQASE---------------------KAVAHLEMELAKSRKEIES 792
KI+ K Q +E + + ++ EL+K+R E++
Sbjct: 702 KESEISGKISGLEKKIQYAEIEKKSIKDKLPQLEQEERNIIEEIDRIKPELSKARTEVDK 761
Query: 793 LKSQHSYLEKQLDSL---------KAASEPRKDEIDRLEELQKIISAEEKEIEKIVNGSK 843
K++ + LEK+++ + ++ P I EE Q + EKE E+ + S
Sbjct: 762 RKTEMNKLEKRMNEIVDRIYKDFSQSVGVPN---IRVYEETQ--LKTAEKEAEERLELSN 816
Query: 844 DLKEKALQLQSKVENAGGEKLKAQKLKVDKIQSDID--------------KSSTEINRHK 889
L + QL+ + G +++ + + +++D++ K + EIN K
Sbjct: 817 QLAKLKYQLEYEQNRDVGSRIRKIESSISSLETDLEGIQKTMSERKETAVKITNEINNWK 876
Query: 890 VQIETAQKMIKKLTKGIAESKKEKEQLVEERVKMERIFDEILEKAHNVQEHYTNTQKLID 949
++E ++ ++ K I + KK+ Q K+ R + T ++LI
Sbjct: 877 KEMEECKQKSEEYEKEILDWKKQASQATTSITKLNR----------QIHSKETQIEQLIS 926
Query: 950 QHRDVLDKAKNDYEKLKKTVDELRASEIEA-DYKLQDLKRSYKELEMRGKGYKKRLDDLQ 1008
Q +++ +K + ++ L D + + + + +L R+Y L+ R +
Sbjct: 927 QKQEITEKCELEHITLPVLSDAMEEDDSDGPQFDFSELGRAY--LQERRPSAR------- 977
Query: 1009 ITLLKHLEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEMVALLEAQLKELNPNLDSIT 1068
EK++A + S +++RT PNL ++
Sbjct: 978 -----------------EKVEAEFRQKIESKTSEIERTA--------------PNLRALD 1006
Query: 1069 EYRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMIT 1128
+Y + ++ ++ V ++ ++KR + FM FN I+ + ++Y+ +T
Sbjct: 1007 QYEAIQEKEKQVSQEFEAARKEEKQVADAFNTVKQKRYELFMEAFNHIASNIDKIYKQLT 1066
Query: 1129 ------LGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALH 1182
LGG A L L + DPF G+ ++ PP K ++++ LSGGEKT+++LAL+F++H
Sbjct: 1067 KSNTHPLGGTAYLNLENEDDPFLHGIKYTTMPPTKRFRDMEQLSGGEKTVAALALLFSIH 1126
Query: 1183 HYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA-------------QFIIISLRNNM 1229
Y+P+P +++DE+DAALD NV+ V +++ ++ A Q I+ISL+++
Sbjct: 1127 SYRPSPFFILDEVDAALDNLNVAKVAKFIRSKSCQAARDNQDAEDGNGFQSIVISLKDSF 1186
Query: 1230 FELADRLVGIYKTD--NCTKSITIN 1252
++ A+ LVG+Y+ +C+ +++ +
Sbjct: 1187 YDKAEALVGVYRDTERSCSSTMSFD 1211
>sp|P48996|DPY27_CAEEL Chromosome condensation protein dpy-27 OS=Caenorhabditis elegans
GN=dpy-27 PE=1 SV=1
Length = 1469
Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 240/796 (30%), Positives = 383/796 (48%), Gaps = 118/796 (14%)
Query: 538 EQAARQKVAEL-KSVMDSEKSQGSVLK-----AILQAKESNQIEGIYGRMGDLGAIDAKY 591
EQ R K EL + V+++ +Q + + + KE+ G GR+GDL +I K+
Sbjct: 578 EQLLRSKKYELDQEVIEASNTQEVTYRHQATAKLHELKEAGLFPGFKGRLGDLASIPIKF 637
Query: 592 DIAVSTAC-PGLDYIVVETTSAAQACVELLRREKLGVATFMILEKQVDL-FPKMKEHFST 649
D A+ST LDY VV+T+ + + KL TF+ L+ D M
Sbjct: 638 DTAISTVFFAQLDYHVVQTSDECRIGIGFCHEYKLPRTTFVFLDHLKDTDTSGMDSTMKF 697
Query: 650 PENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRI--AYSGNKEFRRVVTLDGA 707
P RLFD I + ++ FY + + LV L++ATRI Y G R TL+G+
Sbjct: 698 P--AERLFDKIHCVNPEIRREFYFLIHDILVVDSLEEATRIDKKYPGR---HRYCTLNGS 752
Query: 708 LFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVK 767
+ +SG ++GGG KP G++ P + + +LS++R A K
Sbjct: 753 ILNRSGALTGGG-KPTTGRIRNDNNPNMSGVKKV------------DLSKLR---AAQEK 796
Query: 768 HYQASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQLDSLK-AASEPRKDEIDRLEELQK 826
H A E AHL+++L + E +++ + + KQL+ K K++ R+ EL+
Sbjct: 797 HNHALE---AHLKLQLKQ-----EEIRADNGPIIKQLEIRKRELIMSTKEQKTRIAELKS 848
Query: 827 IISAEEKEIEKIVN----GSKDLKEKALQ---LQSKVENA--GGEKLKAQ----KLKVDK 873
I+A E+ ++VN +DL EK Q L+ +VE + K+K Q K K+D+
Sbjct: 849 SIAAHER---RMVNYREVTVEDLDEKRAQIADLKRQVEESQKSSAKIKQQIEQYKRKMDR 905
Query: 874 ----------------------IQSDIDKSSTEINRHKVQIETAQKMIKKLTKGIAESKK 911
++ DI + + I + +E A+K + +L E +
Sbjct: 906 MFMELVQKNKDSIEQAKDRMGQLEQDIARQTAIIENNPSHLEQAEKKLSELEHMCLEKRS 965
Query: 912 EKEQL----VEERVKMERIFDEILEKAHNV----QEHYTNT-----------QKLIDQHR 952
E + L V E VK I + L+ + + YT Q +D +
Sbjct: 966 EADALAQLEVGEDVKGIDIINAQLQTSTASIDAQRARYTEAVAARREADAAYQTTVDNYN 1025
Query: 953 DVLDKAKNDYEKLKKTVDELRASEIEADYKLQDLKRSYKELE-MRGKGYKKRLDDLQIT- 1010
V K Y++L + +D+L + + +L ++ ++ + E + G R +D I
Sbjct: 1026 MV----KQTYDELMRIIDDLENKTMADNAELDIIESAWMQPEKLYPPGKFVRYNDPDIAA 1081
Query: 1011 ------LLKHLEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEMVALLEAQLKELNPNL 1064
++ E I +++P + + + + + T + LE + +
Sbjct: 1082 KMTDGHVVLPYECIS--MIEPHREAYEEHEARMLEDDVFEDTANKICKLEKDVDKFRREF 1139
Query: 1065 DS--ITEYRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKE 1122
D+ + +Y V+ V + + +++ +E R R +EF + +
Sbjct: 1140 DNKGVRDYAMIVSLLMNEVTSAKKFSDKLKAHREKLNELRMARFNEFSEALAFLGTTTQM 1199
Query: 1123 MYQMITLGGDAELELVD---SLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVF 1179
+YQ+IT GGDA L+ V+ S DPF G+ FSVRP KKSWK I NLSGGEKTL+SL VF
Sbjct: 1200 LYQLITNGGDASLKFVEEGKSTDPFDGGIKFSVRPAKKSWKLIENLSGGEKTLASLCFVF 1259
Query: 1180 ALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVK--DRTKDAQFIIISLRNNMFELADRLV 1237
A+HHY+PTPLYVMDEIDAALD NVS++ +Y+K +RT++AQFIIISLRN MFE+ +RL+
Sbjct: 1260 AMHHYRPTPLYVMDEIDAALDLNNVSLIANYIKHSERTRNAQFIIISLRNQMFEVGNRLL 1319
Query: 1238 GIYKTDNCTKSITINP 1253
GIYK D T +I ++P
Sbjct: 1320 GIYKIDGKTYNIMVDP 1335
Score = 187 bits (475), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 19 RLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLN 78
R+ I + + NFKSYAG+ +GPFHK+ + ++GPNGSGKSNVIDA+LFVFG +A ++R
Sbjct: 90 RMIILNIYVENFKSYAGKHILGPFHKNLTMILGPNGSGKSNVIDALLFVFGFKAGKIRTK 149
Query: 79 KVSELIHNSTNYQNLDSAGVSVHFQEIVDL---DDGTYEAIQGSDFVISRVAFRDNSSKY 135
K+S LI++ NY+ S V++ FQ + D+ + YE + + I+R R+N+SKY
Sbjct: 150 KLSALINSGGNYE---SCSVTIMFQMVKDMPVENYDKYEVLTDNCVCITRTINRENNSKY 206
Query: 136 YINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDI 195
I+D+ ++ +V + L G+D+ +NRFLILQGEVE I+LMKP + P++EG LEY+EDI
Sbjct: 207 RIDDKDASQKDVQELLLRAGIDMTHNRFLILQGEVEAIALMKPTSKNPNEEGMLEYIEDI 266
Query: 196 IGTDRYVEKI 205
+GT+R+V I
Sbjct: 267 VGTNRFVAPI 276
>sp|Q8NDV3|SMC1B_HUMAN Structural maintenance of chromosomes protein 1B OS=Homo sapiens
GN=SMC1B PE=1 SV=2
Length = 1235
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 321/1314 (24%), Positives = 602/1314 (45%), Gaps = 183/1314 (13%)
Query: 25 MVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELI 84
+++ NFKS+ G Q +GPF + F+ ++GPNGSGKSNV+DA+ FV G++ +R+ + ELI
Sbjct: 7 LLVENFKSWRGRQVIGPFRR-FTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKNIQELI 65
Query: 85 HNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYINDRPSNF 144
H + + + S+ SV +I+ +++ G + +R+ R S++ ND +
Sbjct: 66 HGAHIGKPISSSA-SV---KIIYVEES------GEEKTFARI-IRGGCSEFRFNDNLVSR 114
Query: 145 TEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIGTDRYVEK 204
+ +L+ G+ + L+ QG VE IS+ KPK + ++ E+I + + +
Sbjct: 115 SVYIAELEKIGIIVKAQNCLVFQGTVESISVKKPKERT-------QFFEEISTSGELIGE 167
Query: 205 IDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIAWRFVCVSVLDVKNEAEAY-- 262
+E + L + + N+ +KK IA + K EAE Y
Sbjct: 168 YEEKKRK---------LQKAEEDAQ-----FNFNKKKNIAAERRQAKL--EKEEAERYQS 211
Query: 263 MLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNEREKIQDNNKTLKELESV 322
+L+EL + K Q + L + + + + L + + +L +RE + + +K +
Sbjct: 212 LLEELKMNKIQLQLFQLYHNEKKIHL--LNTKLEHVNRDLSVKRESLSHHENIVKARKKE 269
Query: 323 HNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKIKKLEVKVEKDSSKIDDL 382
H R+ ++ + +L+ + + Q +K +E++ H +KKL+V I D
Sbjct: 270 HGMLTRQLQQTEKELKSVETLLNQKRPQYIKAKENTSH---HLKKLDVA----KKSIKDS 322
Query: 383 TKECEHATNQIPKLEENIPKL---LKLFENVF---IADTQNIITFPFMNMINLCVETERY 436
K+C + I LE + L + FE I + I + E+
Sbjct: 323 EKQCSKQEDDIKALETELADLDAAWRSFEKQIEEEILHKKRDIELEASQLDRYKELKEQV 382
Query: 437 RSELATVRAELEP--WEKELIVHKGKLEVTCTESKLLCEKHEAGRKAFEDAQRQMDDILR 494
R ++AT+ +LE WE++ E +L EK G + Q + I
Sbjct: 383 RKKVATMTQQLEKLQWEQK-----------TDEERLAFEKRRHG-----EVQGNLKQIKE 426
Query: 495 RIDTKTTAIRNMQGDLEKNKLEAMEAHN-VEQECFKE----QETLIPLEQAARQKVAELK 549
+I+ K ++E +E + +C KE +ETL+ + + +++E
Sbjct: 427 QIED------------HKKRIEKLEEYTKTCMDCLKEKKQQEETLVDEIEKTKSRMSEFN 474
Query: 550 ---SVMDSEKSQGSV--LKAILQAKESNQIE--------GIYGRMGDLG-AIDAKYDIAV 595
+++ SE + + Q K + +E ++GR+ DL I KY +AV
Sbjct: 475 EELNLIRSELQNAGIDTHEGKRQQKRAEVLEHLKRLYPDSVFGRLFDLCHPIHKKYQLAV 534
Query: 596 STACPG-LDYIVVETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTPENVP 654
+ + IVV + A+ C+ L+ E+ TF+ L+ +D+ P + E +
Sbjct: 535 TKVFGRFITAIVVASEKVAKDCIRFLKEERAEPETFLALD-YLDIKP-INERLRELKGCK 592
Query: 655 RLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGT 714
+ D+IK + ++K GN LV + +++A IA SG E ++ V LDG LF KSG
Sbjct: 593 MVIDVIKTQFPQLKKVIQFVCGNGLVCETMEEARHIALSG-PERQKTVALDGTLFLKSGV 651
Query: 715 MSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHYQAS-- 772
+SGG S + +A EKEL + D S+ Q++ +K +
Sbjct: 652 ISGGSS--------------DLKYKARCWDEKELKNLRDRRSQKIQELKGLMKTLRKETD 697
Query: 773 ----EKAVAHLEMELAKSRKEIESLKSQH--------SYLEKQLDSLKAA----SEPRKD 816
+ + + L S+ E+E +K +H S L+ +L ++++ SE K+
Sbjct: 698 LKQIQTLIQGTQTRLKYSQNELEMIKKKHLVAFYQEQSQLQSELLNIESQCIMLSEGIKE 757
Query: 817 EIDRLEELQKIISAEEKEI-----EKI-VNGSKDLKEKALQLQSKVENAGGEKLKAQKLK 870
R++E Q+ I E +I E+I V ++ + K ++ Q +++ +K K
Sbjct: 758 RQRRIKEFQEKIDKVEDDIFQHFCEEIGVENIREFENKHVKRQQEID----QKRYFYKKM 813
Query: 871 VDKIQSDIDKSSTEINRHKVQIETAQKMIKKLTKGIAESKKEKE---QLVEERVKMERIF 927
+ ++ ++ S + + + +I T ++ I+K ++ I KK +E Q V E + ++
Sbjct: 814 LTRLNVQLEYSRSHLKKKLNKINTLKETIQKGSEDIDHLKKAEENCLQTVNELMAKQQQL 873
Query: 928 DEILEKAHNVQEHYTNTQKLIDQHRDVLDKAKNDYEKLKKTVDELRAS---------EIE 978
+I N TQ I++ R + KL+K V ++ S +
Sbjct: 874 KDI-RVTQNSSAEKVQTQ--IEEERKKFLAVDREVGKLQKEVVSIQTSLEQKRLEKHNLL 930
Query: 979 ADYKLQDLK--------RSYKELEMRGKGYKKRLDDLQITLLKHLEQIQKDLVD-PEKLQ 1029
D K+QD++ E+EM G + I + + E + D E L+
Sbjct: 931 LDCKVQDIEIILLSGSLDDIIEVEM---GTEAESTQATIDIYEKEEAFEIDYSSLKEDLK 987
Query: 1030 ATLADQTLSDACDLKRTLEMVALLE-AQLKELNPNLDSITEYRRKVAAYNERVEDLTTVT 1088
A +DQ + L+ L+ VA E LK PNL ++ + + E +
Sbjct: 988 ALQSDQEIE--AHLRLLLQQVASQEDILLKTAAPNLRALENLKTVRDKFQESTDAFEASR 1045
Query: 1089 QQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAE--LELVDSLDPFSE 1146
++ ++++++ +K+R D F F +S+ + ++Y+ + A+ L + +P+ E
Sbjct: 1046 KEARLCRQEFEQVKKRRYDLFTQCFEHVSISIDQIYKKLCRNNSAQAFLSPENPEEPYLE 1105
Query: 1147 GVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSI 1206
G+ ++ P K + + NLSGGEK +++LAL+FA+H ++P P +V+DE+DAALD N+
Sbjct: 1106 GISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGK 1165
Query: 1207 VGHYVKDRTKDA-QFIIISLRNNMFELADRLVGIY-KTDNC--TKSITINPGSF 1256
V Y+K++T+D Q I+ISL+ + AD L+GIY + D+C ++ +T++ +
Sbjct: 1166 VSSYIKEQTQDQFQMIVISLKEEFYSRADALIGIYPEYDDCMFSRVLTLDLSQY 1219
>sp|B8CW13|SMC_HALOH Chromosome partition protein Smc OS=Halothermothrix orenii (strain H
168 / OCM 544 / DSM 9562) GN=smc PE=3 SV=1
Length = 1185
Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 300/1282 (23%), Positives = 582/1282 (45%), Gaps = 179/1282 (13%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKR-AKQMRLN 78
+F+K++ ++ FKS+A + F +A+VGPNGSGKSN++DA+ +V G++ AK +R +
Sbjct: 1 MFLKKLELKGFKSFAKPITIN-FESPITAIVGPNGSGKSNIVDAIRWVLGEQSAKTLRGS 59
Query: 79 KVSELIH-NSTNYQNLDSAGVSVHFQ---EIVDLDDGTYEAIQGSDFVISRVAFRDNSSK 134
+++++I S +Y+ L+ A V+++ +I+ LD T + ISR D S
Sbjct: 60 RMADVIFAGSKDYKALNKASVTLYLDNQDKILPLDVSTVK--------ISRKVNMDGQSD 111
Query: 135 YYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLED 194
YY+N + ++ L G+ D ++ QG+++ I +P E E E+
Sbjct: 112 YYLNGKICRLKDIENLLMDTGLGKDTYS-IVGQGKIDSIINSRP-------EKLRELFEE 163
Query: 195 IIGTDRY-VEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIA-WRFVCVSV 252
G +Y K+D + L NH ++ + L W+ +K++
Sbjct: 164 AAGISKYKSRKMDAEKR-------LEKTNHDLQRIEDLI----WELEKQVGPLEKAAQKA 212
Query: 253 LDVKNEAEAYMLKELSLL--KWQEKATNLAY--EDTSLKIVELQENVSKLEENLKNEREK 308
+ E + E++LL KW + L+ ED L I +L+ L NL +EK
Sbjct: 213 KKYRRLKEELKVLEVNLLLDKWDKNLDRLSSFEEDEQLLIHKLK----SLTNNLTESQEK 268
Query: 309 IQDNNKTLK----ELESVHNKYMR---RQEELDNDLRVSKEEFKEFERQDVKYREDSKHM 361
++ +TLK EL + ++Y R ++EE +N L + +E + R+ +++
Sbjct: 269 LESLQRTLKVKKDELSRLRDRYYRQKSKREEAENTLCILEERRQGLSRE-------KENL 321
Query: 362 KQKIKKLEVKVEKDSSKIDDLTKECEHATNQIPKLEENIPK---LLKLFENVFIADTQNI 418
Q+IK L ++ E+ + ++D++ +I +N LL + + Q++
Sbjct: 322 NQEIKDLNLRREELTGRLDEIGSRLIELKEKIDNYNQNYESKKVLLDEIKENLDREKQDL 381
Query: 419 ITFPFMNMINLCVETERYRSELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEKHEAG 478
F N+++ VE + S+ ++ E+E+ + T K+ E
Sbjct: 382 F-FLRNNILDGNVELKDISSQFEQLKERGRHLEEEI------KRIKTTRDKISSEYD--- 431
Query: 479 RKAFEDAQRQMDDILRRIDTKTTAIRNMQGDLEKNKL-------EAMEAHNVEQECFKEQ 531
A + + ++ L+ +D K R++ DL++ +L EA + N + E+
Sbjct: 432 --ALNEREDKLRTYLKSVDNKIEEKRSVLTDLKEEELNLQARLEEAKKRFNRTRNKLNEK 489
Query: 532 ETLIPLEQAARQKVAELKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKY 591
+ + + L + DS + +K IL+A+ +++ GI G + D +D KY
Sbjct: 490 NSHLSI----------LHEMEDSLEGYYRGVKNILKAR--SKLTGIIGVVADQIEVDKKY 537
Query: 592 DIAVSTACPG-LDYIVVETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTP 650
++A+ TA G L I+V+ +A+ CV+ L+ K G ATF+ V++ K +F
Sbjct: 538 ELAIETALGGRLQNIIVKDDKSARECVDYLKETKGGQATFL----PVNMVNGRKVNFKNN 593
Query: 651 ENVPRLFDLIKVK------DERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTL 704
+ V ++ + + ++ +K +G T+++ DL A IA + F+ +VTL
Sbjct: 594 Q-VKKVDGFLGIASSFVDCEDYLKPVIEYLLGRTIISTDLKSAIEIARLRKRGFK-IVTL 651
Query: 705 DGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIAD 764
+G + G ++GG + + R + ++ + L NL+++ K+ +
Sbjct: 652 EGDVINSGGAITGGSKNSNKKMLLSRSRKIEDLKKEVLKLQNSLGEDSKNLNQLENKLKE 711
Query: 765 AVKHYQASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQL-----------DSLKAASEP 813
+ + + + LE+E K++ L+ + + L ++L D L
Sbjct: 712 VLNKKEVIKNDIRDLEIEKNNYHKDLIRLEQEKTKLSERLEEIDEEFVDCHDRLGKNDAA 771
Query: 814 RKDEIDRLEELQKIISAEEKEIEKIVNGSKDLKEKALQLQSKVENAGGEKLKAQKLKVDK 873
++ D+L+ L S E+ EIE KEK +V++
Sbjct: 772 KQKLEDKLKALNDDFSLEKNEIEN--------KEK---------------------RVEE 802
Query: 874 IQSDIDKSSTEINRHKVQIETAQKMIKKLTKGIAESKKEKEQLVEERVKMERIFDEILEK 933
+++ + + EI R K+ + + + L K +S KE +L E+ + + +++IL +
Sbjct: 803 LEARHENINDEITRLKINLAQLNEKRESLRKEEEKSNKELIELAEKNEEFKERYNKILSE 862
Query: 934 AHNVQEHYTNTQKLIDQHRDVLDKAKNDYEKLKKTVDELRASEIEADYKLQDLKRSYKEL 993
+ +L + ++K KND +K V+E ++ L+R +L
Sbjct: 863 IKGINNKEGQLNELKVKLSGEIEKLKNDLNLTEKEVEE-------KQQRIDMLQREVSDL 915
Query: 994 EMR--GKGYKKRLDDLQITLLKH-----LEQIQKDL-VDPEKLQATLADQTLSDACDLKR 1045
+ R K +K +L+IT L++ +E ++ D V PE D D +
Sbjct: 916 QTRLDKKKDEKHQIELKITRLENRNERIVEILENDYDVKPE------------DGFDDRI 963
Query: 1046 TLEMVALLEAQLKELNPNLDSI-TEYRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRK- 1103
+ + ++KEL + + T + + YN+ V+ L + Q DD+ K + K
Sbjct: 964 KITNYSRAGQKVKELKNAIKKLGTVNQGAIEEYNDLVDRLDYLQNQHDDLLKAKESITKV 1023
Query: 1104 -KRLDEFMA-----GFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKK 1157
+ ++E M+ F ++ + ++ + GG A L+L + + GV +PP K
Sbjct: 1024 IQEIEETMSSLFHEAFLKVNGEFNNTFKELFNGGQASLKLTEPENLLETGVEIVAQPPGK 1083
Query: 1158 SWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKD 1217
K ++ +SGGE+ L+++ALVFA P+P Y++DEIDA LD NV+ Y+K+ ++
Sbjct: 1084 QLKKLSLMSGGERALTAIALVFAFLKVNPSPFYILDEIDAPLDDANVTRFARYIKEYSRF 1143
Query: 1218 AQFIIISLRNNMFELADRLVGI 1239
AQF+I++ R NM A+ + G+
Sbjct: 1144 AQFLIVTHRKNMMAEAETIYGV 1165
>sp|P51834|SMC_BACSU Chromosome partition protein Smc OS=Bacillus subtilis (strain 168)
GN=smc PE=1 SV=3
Length = 1186
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 311/1288 (24%), Positives = 584/1288 (45%), Gaps = 168/1288 (13%)
Query: 20 LFIKEMVMRNFKSYAGEQRVG-PFHKSFSAVVGPNGSGKSNVIDAMLFVFGKR-AKQMRL 77
+F+K + + FKS+A +R+ F K +AVVGPNGSGKSN+ DA+ +V G++ A+ +R
Sbjct: 1 MFLKRLDVIGFKSFA--ERISVDFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRG 58
Query: 78 NKVSELIH-NSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYY 136
K+ ++I S + + L+ A V++ +D DD + I + ++R +R S++
Sbjct: 59 GKMEDIIFAGSDSRKRLNLAEVTL----TLDNDD-HFLPIDFHEVSVTRRVYRSGESEFL 113
Query: 137 INDRPSNFTEVTKKLKGKGVDLDNNRFLIL-QGEVEQISLMKPKGQGPHDE---GFLEY- 191
IN++P ++ G L F I+ QG+VE+I K + + E G L+Y
Sbjct: 114 INNQPCRLKDIIDLFMDSG--LGKEAFSIISQGKVEEILSSKAEDRRSIFEEAAGVLKYK 171
Query: 192 LEDIIGTDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFK-WLNWQRKKEIAWRFVCV 250
++ E D + +L +L G ++ + K +L ++KKE+ + +
Sbjct: 172 TRKKKAENKLFETQDNLNRVEDILHELEGQVEPLKIQASIAKDYL--EKKKELEHVEIAL 229
Query: 251 SVLDVKN-EAEAYMLKE-LSLLKWQEKATNLAY-------EDTSLKIVELQENVSKLEEN 301
+ D++ + LKE + + K +E A + A EDT KI L E+V +L++
Sbjct: 230 TAYDIEELHGKWSTLKEKVQMAKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQV 289
Query: 302 L---KNEREKIQDNNKTLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDS 358
L E EK++ + LKE R++ + N ++ E V++++
Sbjct: 290 LLVTSEELEKLEGRKEVLKE---------RKKNAVQNQ--------EQLEEAIVQFQQKE 332
Query: 359 KHMKQKIKKLEVKVEKDSSKIDDLTKECEHATNQIPKLEENIPKLLKLFENVFIADTQNI 418
+K+++ K E E +++ L + + + EN+ + ++ ++ +
Sbjct: 333 TVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQALSLHNENVEEKIEQLKSDY------- 385
Query: 419 ITFPFMNMINLCVETERYRSELATVRAELEPWEKELIVHKGKLE-VTCTESKLLCEKHE- 476
F +N A++R EL+ + ++ L+ + K L E+H+
Sbjct: 386 --FELLN-------------SQASIRNELQLLDDQMSQSAVTLQRLADNNEKHLQERHDI 430
Query: 477 AGRKAFEDAQRQMDDILRRIDTKTTAIRNMQGDLEKNKLEAMEAHNVEQECFKEQETLIP 536
+ RKA + + I + I ++ A R+MQ E+ K + + + + ++
Sbjct: 431 SARKAA--CETEFARIEQEIHSQVGAYRDMQTKYEQKKRQYEKNESALYQAYQ------- 481
Query: 537 LEQAARQKVAELKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVS 596
Q AR K L+++ +K +L+AKE ++ GI G + +L + + KY+ A+
Sbjct: 482 YVQQARSKKDMLETMQGDFSGFYQGVKEVLKAKE--RLGGIRGAVLELISTEQKYETAIE 539
Query: 597 TAC-PGLDYIVVETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTPENVPR 655
A ++V + +A+ ++ L++ G ATF+ L D + ++ E R
Sbjct: 540 IALGASAQHVVTDDEQSARKAIQYLKQNSFGRATFLPLSVIRDRQLQSRD----AETAAR 595
Query: 656 LFDLIKVKDERMKL--AFYAA----MGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALF 709
+ V E + A+ + +G L+ +DL A +A +R +VTL+G +
Sbjct: 596 HSSFLGVASELVTFDPAYRSVIQNLLGTVLITEDLKGANELAKLLGHRYR-IVTLEGDVV 654
Query: 710 EKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHY 769
G+M+GG K + +++ +EL + L+ + +K A +
Sbjct: 655 NPGGSMTGGAVKKKNN--------------SLLGRSRELEDVTKRLAEMEEKTALLEQEV 700
Query: 770 QASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQLDSLKAASEPRKDEIDRLEELQKIIS 829
+ + ++ +E +LA R+ E L+ + ++ QL L+ A + ++ ++ + +S
Sbjct: 701 KTLKHSIQDMEKKLADLRETGEGLRLKQQDVKGQLYELQVAEKNINTHLELYDQEKSALS 760
Query: 830 AEEKEIEKIVNGSKDLKEKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRHK 889
++E + ++++ L+ E+L A K+ +++ DID+ + + +
Sbjct: 761 ESDEE--------RKVRKRKLE----------EELSAVSEKMKQLEEDIDRLT---KQKQ 799
Query: 890 VQIETAQKMIKKLTK-GIAESKKEKEQLVEE----RVKMERIFDEI-LEKAHNVQEHYTN 943
Q T + + +LT+ IA +KKE+ EE R+K E E+ L++A T+
Sbjct: 800 TQSSTKESLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTS 859
Query: 944 TQKLIDQHRDVLDKAK----NDYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKG 999
+ L++A ND K + + R I+ + L +R KE+
Sbjct: 860 EMSSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEM------ 913
Query: 1000 YKKRLDDLQITLLK-----------HLEQIQKDLVDPEKLQATLADQTLSDACDLKRTLE 1048
KRL + TLLK L+ + + L + L A + D + +
Sbjct: 914 --KRLYKQKTTLLKDEEVKLGRMEVELDNLLQYLREEYSLSFEGAKEKYQLETDPEEARK 971
Query: 1049 MVALLEAQLKELNP-NLDSITEYRRKVAAY---NERVEDLTTVTQQRDDVKKQYDEWRKK 1104
V L++ ++EL NL SI E+ R Y +E+ EDLT V ++ DE K
Sbjct: 972 RVKLIKLAIEELGTVNLGSIDEFERVNERYKFLSEQKEDLTEAKNTLFQVIEEMDEEMTK 1031
Query: 1105 RLDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIAN 1164
R F F I ++++ + GG AEL L D D GV +PP K +N+
Sbjct: 1032 R---FNDTFVQIRSHFDQVFRSLFGGGRAELRLTDPNDLLHSGVEIIAQPPGKKLQNLNL 1088
Query: 1165 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 1224
LSGGE+ L+++AL+F++ +P P V+DE++AALD NV Y+K + D QFI+I+
Sbjct: 1089 LSGGERALTAIALLFSILKVRPVPFCVLDEVEAALDEANVFRFAQYLKKYSSDTQFIVIT 1148
Query: 1225 LRNNMFELADRLVGI-YKTDNCTKSITI 1251
R E AD L G+ + +K I++
Sbjct: 1149 HRKGTMEEADVLYGVTMQESGVSKVISV 1176
>sp|Q59037|SMC_METJA Chromosome partition protein Smc OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=smc PE=3 SV=2
Length = 1169
Score = 193 bits (491), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 196/738 (26%), Positives = 362/738 (49%), Gaps = 99/738 (13%)
Query: 546 AELKSVMDSEK-SQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVSTACPG-LD 603
A +K++ + E+ S ++ IL A + GI +G+LG +Y A+ A L+
Sbjct: 497 ARIKALKEMEELSMDRAIREILNA----NLPGIIDIVGNLGKTKIEYKTAIEVAAGNRLN 552
Query: 604 YIVVETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTPEN--VPRLFDLIK 661
+IVV+ A ++ L+ KLG ATF+ L++ + +E + E+ + R DL++
Sbjct: 553 HIVVKRMDDAVRAIKYLKERKLGRATFLPLDR-----IEGREAYYIDEDGVIGRAIDLVE 607
Query: 662 VKDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRV--VTLDGALFEKSGTMSGGG 719
DE+ + F GNT+V +++D A +A K++R+V VTLDG + E SG M GG
Sbjct: 608 F-DEKYRRVFEYVFGNTVVVENIDIAKELA----KKYRKVRFVTLDGDVIEPSGAMIGGT 662
Query: 720 SKPRGG-KMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHYQASEKAVAH 778
K + K+ + + A+ II E EL + + + R+ + VK A + + +
Sbjct: 663 FKSKAKIKVDVDLSKLNKIADEIIAIESELRKIKEEIERL----SKIVKRSSAKKMEIEN 718
Query: 779 LEMELAKSRKEIESLKSQHSYLEKQLDSLKAASEPRKDE--------------IDRLEEL 824
+E+ K + + EK +K KD ++R+ E+
Sbjct: 719 T-LEIIKKNE-----MRKREIAEKNTIKIKELELKNKDILEELEELNLKREEILNRINEI 772
Query: 825 QKIISAEEKEIEKIVNGSKDLK-EKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSST 883
+ I+ + EKI+N K+ + ++ L+ +++E GE LK + + K++++IDK T
Sbjct: 773 ESKINELIERREKIINELKEYESDENLKRMNEIE---GE-LKILEKEKAKLKNEIDKGLT 828
Query: 884 EINRHKVQIETAQKMIKKLTKGIAESKKEKEQLVEERVKMERIFDEILEKAHNVQEHYTN 943
+ E I++L K ++E L+ ++V ILEK + +
Sbjct: 829 LVK------EILIPKIEELNKKVSE-------LINKKV--------ILEK------NISF 861
Query: 944 TQKLIDQHRDVLDKAKNDYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKR 1003
++ I+++ +L++ + YE+L K + EL + + + +++ L+R +E+ + + + R
Sbjct: 862 YKESIEKNLSILEEKRKRYEELAKNLKELTEKKEQLEKEIETLERERREILRKVRDIENR 921
Query: 1004 LDDLQITLLKHLEQIQKDLVDPEKLQATLADQTLSDACDLKRTLE---------MVALLE 1054
+++L + K+ KL+ L + D+ + LE + LE
Sbjct: 922 INELMVEKAKY----------ESKLEEEERKLYLCEKVDVSKELEKKDIEELEIYIGELE 971
Query: 1055 AQLKELNP-NLDSITEYRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGF 1113
++K L P N+ +I +Y Y E +E + + +E K+ + FM F
Sbjct: 972 NEIKSLEPVNMRAIEDYNYVAERYKELIEKRKEYERDEKKYLQLMEELENKKKEVFMEVF 1031
Query: 1114 NAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLS 1173
N ++ +E+Y+ I GG +L L + +PF G++ P K ++ +SGGEK+L+
Sbjct: 1032 NKVAKNFEEVYKEI--GGIGKLSLENEKNPFEGGILIDASPRGKKLLSLDAMSGGEKSLT 1089
Query: 1174 SLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELA 1233
+LA +FA+ P+P YV+DE+DAALD KNVS++ +K+ +KD+QFI+IS R M A
Sbjct: 1090 ALAFLFAIQRLNPSPFYVLDEVDAALDVKNVSLIADMIKNASKDSQFIVISHREQMVSKA 1149
Query: 1234 DRLVGIYKTDNCTKSITI 1251
D + G+Y + +K + I
Sbjct: 1150 DVVYGVYMENGLSKVVGI 1167
>sp|P32908|SMC1_YEAST Structural maintenance of chromosomes protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SMC1 PE=1 SV=1
Length = 1225
Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 187/730 (25%), Positives = 360/730 (49%), Gaps = 83/730 (11%)
Query: 576 GIYGRMGDL-GAIDAKYDIAVSTAC-PGLDYIVVETTSAAQACVELLRREKLGVATFMIL 633
G+ G + DL KY +AVST D ++VE + AQ C+ L++++ G A+F+ L
Sbjct: 528 GVKGLVHDLCHPKKEKYGLAVSTILGKNFDSVIVENLTVAQECIAFLKKQRAGTASFIPL 587
Query: 634 EKQVDLFPKMKEHFSTPENVPRLFDLIKVKDE-RMKLAFYAAMGNTLVAKDLDQATRIAY 692
+ P + S P++ + + + E + A G++++ L+ A + +
Sbjct: 588 DTIETELPTL----SLPDSQDYILSINAIDYEPEYEKAMQYVCGDSIICNTLNIAKDLKW 643
Query: 693 SGNKEFR-RVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAM 751
K R ++VT++GAL K+G M+GG S R +++++ + +L
Sbjct: 644 K--KGIRGKLVTIEGALIHKAGLMTGGISGDANN------RWDKEEYQSLMSLKDKLLIQ 695
Query: 752 VDNLSRIRQKIADAVKHYQASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQLDSLKAAS 811
+D LS ++ +++++ + E +V+ L ++A +L++Q + ++ LD +
Sbjct: 696 IDELSNGQR--SNSIRAREV-ENSVSLLNSDIA-------NLRTQVTQQKRSLDENRLEI 745
Query: 812 EPRKDEIDRLEELQKIISAEEKEIEKIVNGSKDL-KEK-ALQ------LQSKV------- 856
+ D I++ E+Q I+ +K+++ + N +L KEK ALQ SK+
Sbjct: 746 KYHNDLIEK--EIQPKITELKKKLDDLENTKDNLVKEKEALQNNIFKEFTSKIGFTIKEY 803
Query: 857 ENAGGEKLKAQKLKVDKIQSDIDKSSTEINRHKVQIETAQKMIKKLTKGIAESKKEKEQL 916
EN GE ++ Q ++ ++Q I ++ ++ T Q+ +K K + ++ E + L
Sbjct: 804 ENHSGELMRQQSKELQQLQKQILTVENKLQFETDRLSTTQRRYEKAQKDLENAQVEMKSL 863
Query: 917 VEERVKMERIFDEI---LEKAHN----VQEHYTNTQKLIDQHRDVLDKAKNDYEKLKKTV 969
E+ +E I LE+ N +Q+ + Q ++ D+L+ ++ + LK+
Sbjct: 864 EEQEYAIEMKIGSIESKLEEHKNHLDELQKKFVTKQSELNSSEDILEDMNSNLQVLKRER 923
Query: 970 DELRAS----EIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQKDLVD- 1024
D ++ ++E L++ K S + + + +DDL I+ + + +D
Sbjct: 924 DGIKEDIEKFDLERVTALKNCKISNINIPISSET---TIDDLPISSTDNEAITISNSIDI 980
Query: 1025 -----PEKLQATLADQTLSDACDLKRTLEM-VALLEAQLKELNPNLDSITEYRRKVAAYN 1078
P+K + D ++ LE + +E L EL PN ++ Y +
Sbjct: 981 NYKGLPKKYKENNTDSA-------RKELEQKIHEVEEILNELQPNARALERYDEAEGRFE 1033
Query: 1079 ERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMIT---------L 1129
+ + + + Q+ + +KKR + F F+ +S L +Y+ +T
Sbjct: 1034 VINNETEQLKAEEKKILNQFLKIKKKRKELFEKTFDYVSDHLDAIYRELTKNPNSNVELA 1093
Query: 1130 GGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPL 1189
GG+A L + D +PF+ G+ + PP K +K++ LSGGEKT+++LAL+FA++ Y+P+P
Sbjct: 1094 GGNASLTIEDEDEPFNAGIKYHATPPLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPF 1153
Query: 1190 YVMDEIDAALDFKNVSIVGHYV-KDRTKDAQFIIISLRNNMFELADRLVGIYK--TDNCT 1246
+V+DE+DAALD NV + Y+ + R D QFI+ISL+N MFE +D LVG+Y+ +N +
Sbjct: 1154 FVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMFEKSDALVGVYRQQQENSS 1213
Query: 1247 KSITINPGSF 1256
K IT++ ++
Sbjct: 1214 KIITLDLSNY 1223
>sp|Q8TZY2|SMC_PYRFU Chromosome partition protein Smc OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=smc PE=1 SV=2
Length = 1177
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 187/698 (26%), Positives = 355/698 (50%), Gaps = 79/698 (11%)
Query: 574 IEGIYGRMGDLGAI-DAKYDIAVSTACPG-LDYIVVETTSAAQACVELLRREKLGVATFM 631
I GIYG + +L + D Y +A+ A D +VVE A+ ++ L+ KLG TF+
Sbjct: 519 IGGIYGTLAELIKVKDEAYALAIEVALGNRADNVVVEDELVAEKAIKYLKEHKLGRLTFL 578
Query: 632 ILEKQVDLFPKMKEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIA 691
L K + PK H + +P + D+I+ D++++ A A+G+T++ +++A
Sbjct: 579 PLNK---IKPK---HVDSSVGLPAV-DVIEY-DQKIENAVKFALGDTVIVNSMEEAR--P 628
Query: 692 YSGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAM 751
+ G R+VT++G L+E+SG ++GG + RG + T+ +L
Sbjct: 629 HIGKV---RMVTIEGELYERSGAITGGHFRARGLAVDTT----------------KLREK 669
Query: 752 VDNLSRIRQKIADAVK----HYQASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQLDSL 807
V++L R ++ + + ++ E A L ++L+ +KE+E L S+ L + L+
Sbjct: 670 VESLRRRKEALEGELNSLKIELRSLENASFELRIKLSDEKKELE-LASKD--LNRLLEEE 726
Query: 808 KAASEPRKDEIDRLEELQKIISAEEKEIEKIVNGSKDLKEKALQLQSKVENAGGEKLKAQ 867
A E ++ +++E+++ I E+ E+ K+ + L+ K +L+ +EN +L +
Sbjct: 727 NAVKEEIEESERKIQEIEQKIENEKSELAKLRGRIQRLERKKEKLKKALENPEAREL-ME 785
Query: 868 KLKVDKIQSDIDKSSTEINRHKVQIETAQKMIKKLTKGIAESKKEKEQLVEERVKMERIF 927
K+++ I +I E++R + +IE+ + + E+L+ + +E
Sbjct: 786 KIRI--IDGEISSLKEELSRIESRIESLESRLN-------------EELLPRKASLEEEI 830
Query: 928 DEILEKAHNVQEHYTNTQKLIDQHRDVLDKAKNDYEKLKKTVDELRAS--EIEADY-KLQ 984
+ ++ K + ++ + + +K ++ L+K K+ E +K + LR ++E D KL+
Sbjct: 831 EGLVNKINALKNNISENEKALELLNKELEKLKSIEENIKGEIRTLREKRKKLEEDISKLR 890
Query: 985 D----LKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQKDLVDPEKLQATLADQTLSDA 1040
+ L+R +ELE+ K R D Q+ LE+ +K Q T D+ L +
Sbjct: 891 EKKEVLQRKLQELEIEANTLKVR--DAQLN--AQLEE--------KKYQLTHYDKNLIKS 938
Query: 1041 C-----DLKRTLEMVALLEAQLKELNP-NLDSITEYRRKVAAYNERVEDLTTVTQQRDDV 1094
DL++ + + +E +++ L P N+ +I ++ Y E + +++ +
Sbjct: 939 IKEIPLDLEKVKKEIEKMEEEIRSLEPVNMKAIEDFEIVERRYLELKSKREKLEAEKESI 998
Query: 1095 KKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRP 1154
+ +E K++ + FM F AIS E++ ++ GG A L L + DPFS G+ +P
Sbjct: 999 IEFINEIEKEKKNVFMRTFEAISRNFSEIFAKLSPGGSARLILENPEDPFSGGLEIEAKP 1058
Query: 1155 PKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDR 1214
K K I +SGGEK L++LA VFA+ +KP P Y+ DEIDA LD NV V +K+
Sbjct: 1059 AGKDVKRIEAMSGGEKALTALAFVFAIQKFKPAPFYLFDEIDAHLDDANVKRVADLIKES 1118
Query: 1215 TKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITIN 1252
+K++QFI+I+LR+ M AD+++G+ D +K ++++
Sbjct: 1119 SKESQFIVITLRDVMMANADKIIGVSMRDGVSKVVSLS 1156
>sp|Q14683|SMC1A_HUMAN Structural maintenance of chromosomes protein 1A OS=Homo sapiens
GN=SMC1A PE=1 SV=2
Length = 1233
Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 184/723 (25%), Positives = 352/723 (48%), Gaps = 90/723 (12%)
Query: 576 GIYGRMGDLG-AIDAKYDIAVSTAC-PGLDYIVVETTSAAQACVELLRREKLGVATFMIL 633
+YGR+ DL KY IAV+ +D I+V++ + C++ ++ ++ TF+ L
Sbjct: 514 SVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPL 573
Query: 634 EKQVDLFPKMKEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYS 693
+ +++ P E + + D+I+ + +K A A GN LV +++ A RIA+
Sbjct: 574 D-YLEVKP-TDEKLRELKGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFG 631
Query: 694 GNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVD 753
G++ + V LDG LF+KSG +SGG S + A+A EK + + +
Sbjct: 632 GHQRHK-TVALDGTLFQKSGVISGGAS--------------DLKAKARRWDEKAVDKLKE 676
Query: 754 NLSRIRQKIADAVK--HYQASEKAV---AH-LEMELAKSRKEIESLKSQHSYLEKQ---- 803
R+ +++ + +K +A + V AH L+M L S+ ++E K++H L Q
Sbjct: 677 KKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSK 736
Query: 804 LDSLKAASEPRKDEIDRLEELQKIISAEEKEIEKIVNGSKDLKEKALQLQSKV-----EN 858
L+S A PR ++I R II + E+E+ KDLKEK Q++ +V
Sbjct: 737 LESELANFGPRINDIKR------IIQSREREM-------KDLKEKMNQVEDEVFEEFCRE 783
Query: 859 AGGEKLKAQKLKVDKIQSDIDKSSTEINRHKV-----------QIETAQKMIKKLTKGIA 907
G ++ + + K Q++I K E K Q++ Q + + +
Sbjct: 784 IGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVK 843
Query: 908 ESKKEKEQLVEERVKMERIFDEILEKAHNVQ-EHYTNTQKLIDQH------RDVLDKAKN 960
+ + E E+L +E + +I DE + + +++ +H ++ D++ R L A
Sbjct: 844 KDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANK 903
Query: 961 DYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQK 1020
+ L+K V + + +L ++ K +++ K +DD I+ + Q +
Sbjct: 904 EMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDD--ISQEEGSSQGED 961
Query: 1021 DLVDPEKLQATLADQTL-----SDACDLKRTLEMVALLEAQLKELNPNLDSITEYRRKVA 1075
+ +++ + A + L D C+ + + ++ ++ L L+ +++A
Sbjct: 962 SVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIA 1021
Query: 1076 AYN----ERVEDLTTVTQQRDD-----------VKKQYDEWRKKRLDEFMAGFNAISLKL 1120
A N E++E + Q+ D K+ +++ +K+R D F A F +++ +
Sbjct: 1022 APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNI 1081
Query: 1121 KEMYQMITLGGDAE--LELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALV 1178
E+Y+ ++ A+ L + +P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+
Sbjct: 1082 DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL 1141
Query: 1179 FALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDR-TKDAQFIIISLRNNMFELADRLV 1237
FA+H YKP P +V+DEIDAALD N+ V +Y+K++ T + Q I+ISL+ + A+ L+
Sbjct: 1142 FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLI 1201
Query: 1238 GIY 1240
G+Y
Sbjct: 1202 GVY 1204
>sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes protein 1A OS=Mus musculus
GN=Smc1a PE=1 SV=4
Length = 1233
Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 182/723 (25%), Positives = 351/723 (48%), Gaps = 90/723 (12%)
Query: 576 GIYGRMGDLG-AIDAKYDIAVSTAC-PGLDYIVVETTSAAQACVELLRREKLGVATFMIL 633
+YGR+ DL KY IAV+ +D I+V++ + C++ ++ ++ TF+ L
Sbjct: 514 SVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPL 573
Query: 634 EKQVDLFPKMKEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYS 693
+ +++ P E + + D+I+ + +K A A GN LV +++ A RIA+
Sbjct: 574 D-YLEVKP-TDEKLRELKGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFG 631
Query: 694 GNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVD 753
G++ + V LDG LF+KSG +SGG S + A+A EK + + +
Sbjct: 632 GHQRHK-TVALDGTLFQKSGVISGGAS--------------DLKAKARRWDEKAVDKLKE 676
Query: 754 NLSRIRQKIADAVKHYQASE-----KAVAH-LEMELAKSRKEIESLKSQHSYLEKQ---- 803
R+ +++ + +K + ++ AH L+M L S+ ++E K++H L Q
Sbjct: 677 KKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSK 736
Query: 804 LDSLKAASEPRKDEIDRLEELQKIISAEEKEIEKIVNGSKDLKEKALQLQSKV-----EN 858
L+S A PR ++I R II + E+E+ KDLKEK Q++ +V
Sbjct: 737 LESELANFGPRINDIKR------IIQSREREM-------KDLKEKMNQVEDEVFEEFCRE 783
Query: 859 AGGEKLKAQKLKVDKIQSDIDKSSTEINRHKV-----------QIETAQKMIKKLTKGIA 907
G ++ + + K Q++I K E K Q++ Q + + +
Sbjct: 784 IGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVK 843
Query: 908 ESKKEKEQLVEERVKMERIFDEILEKAHNVQ-EHYTNTQKLIDQH------RDVLDKAKN 960
+ + E E+L +E + +I DE + + +++ +H ++ D++ R L A
Sbjct: 844 KDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANK 903
Query: 961 DYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQK 1020
+ L+K V + + +L ++ K +++ K +DD I+ + Q ++
Sbjct: 904 EMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDD--ISQEEGSSQGEE 961
Query: 1021 DLVDPEKLQATLADQTL-----SDACDLKRTLEMVALLEAQLKELNPNLDSITEYRRKVA 1075
+ ++ + A + L D C+ + + ++ ++ L L+ +++A
Sbjct: 962 SVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIA 1021
Query: 1076 AYN----ERVEDLTTVTQQRDD-----------VKKQYDEWRKKRLDEFMAGFNAISLKL 1120
A N E++E + Q+ D K+ +++ +K+R D F A F +++ +
Sbjct: 1022 APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNI 1081
Query: 1121 KEMYQMITLGGDAE--LELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALV 1178
E+Y+ ++ A+ L + +P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+
Sbjct: 1082 DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL 1141
Query: 1179 FALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDR-TKDAQFIIISLRNNMFELADRLV 1237
FA+H YKP P +V+DEIDAALD N+ V +Y+K++ T + Q I+ISL+ + A+ L+
Sbjct: 1142 FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLI 1201
Query: 1238 GIY 1240
G+Y
Sbjct: 1202 GVY 1204
>sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus
GN=Smc1a PE=1 SV=1
Length = 1233
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 182/723 (25%), Positives = 351/723 (48%), Gaps = 90/723 (12%)
Query: 576 GIYGRMGDLG-AIDAKYDIAVSTAC-PGLDYIVVETTSAAQACVELLRREKLGVATFMIL 633
+YGR+ DL KY IAV+ +D I+V++ + C++ ++ ++ TF+ L
Sbjct: 514 SVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPL 573
Query: 634 EKQVDLFPKMKEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYS 693
+ +++ P E + + D+I+ + +K A A GN LV +++ A RIA+
Sbjct: 574 D-YLEVKP-TDEKLRELKGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFG 631
Query: 694 GNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVD 753
G++ + V LDG LF+KSG +SGG S + A+A EK + + +
Sbjct: 632 GHQRHK-TVALDGTLFQKSGVISGGAS--------------DLKAKARRWDEKAVDKLKE 676
Query: 754 NLSRIRQKIADAVKHYQASE-----KAVAH-LEMELAKSRKEIESLKSQHSYLEKQ---- 803
R+ +++ + +K + ++ AH L+M L S+ ++E K++H L Q
Sbjct: 677 KKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSK 736
Query: 804 LDSLKAASEPRKDEIDRLEELQKIISAEEKEIEKIVNGSKDLKEKALQLQSKV-----EN 858
L+S A PR ++I R II + E+E+ KDLKEK Q++ +V
Sbjct: 737 LESELANFGPRINDIKR------IIQSREREM-------KDLKEKMNQVEDEVFEEFCRE 783
Query: 859 AGGEKLKAQKLKVDKIQSDIDKSSTEINRHKV-----------QIETAQKMIKKLTKGIA 907
G ++ + + K Q++I K E K Q++ Q + + +
Sbjct: 784 IGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVK 843
Query: 908 ESKKEKEQLVEERVKMERIFDEILEKAHNVQ-EHYTNTQKLIDQH------RDVLDKAKN 960
+ + E E+L +E + +I DE + + +++ +H ++ D++ R L A
Sbjct: 844 KDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANK 903
Query: 961 DYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQK 1020
+ L+K V + + +L ++ K +++ K +DD I+ + Q ++
Sbjct: 904 EMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDD--ISQEEGGSQGEE 961
Query: 1021 DLVDPEKLQATLADQTL-----SDACDLKRTLEMVALLEAQLKELNPNLDSITEYRRKVA 1075
+ ++ + A + L D C+ + + ++ ++ L L+ +++A
Sbjct: 962 SVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIA 1021
Query: 1076 AYN----ERVEDLTTVTQQRDD-----------VKKQYDEWRKKRLDEFMAGFNAISLKL 1120
A N E++E + Q+ D K+ +++ +K+R D F A F +++ +
Sbjct: 1022 APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNI 1081
Query: 1121 KEMYQMITLGGDAE--LELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALV 1178
E+Y+ ++ A+ L + +P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+
Sbjct: 1082 DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL 1141
Query: 1179 FALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDR-TKDAQFIIISLRNNMFELADRLV 1237
FA+H YKP P +V+DEIDAALD N+ V +Y+K++ T + Q I+ISL+ + A+ L+
Sbjct: 1142 FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLI 1201
Query: 1238 GIY 1240
G+Y
Sbjct: 1202 GVY 1204
>sp|O97593|SMC1A_BOVIN Structural maintenance of chromosomes protein 1A OS=Bos taurus
GN=SMC1A PE=1 SV=1
Length = 1233
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 182/723 (25%), Positives = 349/723 (48%), Gaps = 90/723 (12%)
Query: 576 GIYGRMGDLG-AIDAKYDIAVSTAC-PGLDYIVVETTSAAQACVELLRREKLGVATFMIL 633
+YGR+ DL KY IAV+ +D I+V++ + C++ ++ ++ TF+ L
Sbjct: 514 SVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPL 573
Query: 634 EKQVDLFPKMKEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYS 693
+ +++ P E + + D+I+ + +K A A GN LV +++ A RIA+
Sbjct: 574 D-YLEVKP-TDEKLRELKGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFG 631
Query: 694 GNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVD 753
G++ + V LDG LF+KSG +SGG S + A+A EK + + +
Sbjct: 632 GHQRHK-TVALDGTLFQKSGVISGGAS--------------DLKAKARRWDEKAVDKLKE 676
Query: 754 NLSRIRQKIADAVKHYQASE-----KAVAH-LEMELAKSRKEIESLKSQHSYLEKQ---- 803
R+ +++ + +K + ++ AH L+M L S+ ++E K++H L Q
Sbjct: 677 KKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSK 736
Query: 804 LDSLKAASEPRKDEIDRLEELQKIISAEEKEIEKIVNGSKDLKEKALQLQSKV-----EN 858
L+S A PR ++I R II + E+E+ KDLKEK Q++ +V
Sbjct: 737 LESELANFGPRINDIKR------IIQSREREM-------KDLKEKMNQVEDEVFEEFCRE 783
Query: 859 AGGEKLKAQKLKVDKIQSDIDKSSTEINRHKV-----------QIETAQKMIKKLTKGIA 907
G ++ + + K Q++I K E K Q++ Q + + +
Sbjct: 784 IGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVK 843
Query: 908 ESKKEKEQLVEERVKMERIFDEILEKAHNVQ-EHYTNTQKLIDQH------RDVLDKAKN 960
+ + E E+L +E + +I DE + + +++ +H ++ D++ R L A
Sbjct: 844 KDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANK 903
Query: 961 DYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQK 1020
+ L+K V + + +L ++ K +++ K +DD I+ + Q +
Sbjct: 904 EMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDD--ISQEEGSSQGED 961
Query: 1021 DLVDPEKLQATLADQTL-----SDACDLKRTLEMVALLEAQLKELNPNLDSITEYRRKVA 1075
+ ++ A + L D C+ + + ++ ++ L L+ +++A
Sbjct: 962 SVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIA 1021
Query: 1076 AYN----ERVEDLTTVTQQRDD-----------VKKQYDEWRKKRLDEFMAGFNAISLKL 1120
A N E++E + Q+ D K+ +++ +K+R D F A F +++ +
Sbjct: 1022 APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNI 1081
Query: 1121 KEMYQMITLGGDAE--LELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALV 1178
E+Y+ ++ A+ L + +P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+
Sbjct: 1082 DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL 1141
Query: 1179 FALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDR-TKDAQFIIISLRNNMFELADRLV 1237
FA+H YKP P +V+DEIDAALD N+ V +Y+K++ T + Q I+ISL+ + A+ L+
Sbjct: 1142 FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLI 1201
Query: 1238 GIY 1240
G+Y
Sbjct: 1202 GVY 1204
>sp|Q7NG51|SMC_GLOVI Chromosome partition protein Smc OS=Gloeobacter violaceus (strain PCC
7421) GN=smc PE=3 SV=1
Length = 1165
Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 176/690 (25%), Positives = 314/690 (45%), Gaps = 85/690 (12%)
Query: 574 IEGIYGRMGDLGAIDAKYDIAVSTACPG-LDYIVVETTSAAQACVELLRREKLGVATFMI 632
I+G++G + LG ++A+Y A+ A L+ +VVE + A +ELL+ + G ATF+
Sbjct: 517 IQGVHGLISQLGRVEAQYQGALEVAAGNRLNNVVVEDDAVAAQAIELLKSRRAGRATFLP 576
Query: 633 LEKQVDLFPKMKEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAY 692
L K + E + DLI+ D R + AF G+T+V + L+ A R
Sbjct: 577 LNKLRS--GRYLERLHEEGAIGYALDLIEF-DRRYEAAFVQVFGDTVVFRSLELARR--Q 631
Query: 693 SGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEA---IINAEKELS 749
G R+VT+ G L EKSG M+GG R G G ++ AE + + ++ L+
Sbjct: 632 LGRY---RMVTMAGELLEKSGAMTGGSLDARRGGSGFALSEPPELAEMRARLGDLDRLLA 688
Query: 750 AMVDNLSRIRQKIADAVKHYQASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQLDSLKA 809
+ + L R Q+ + +A+++ + +E E L +HS + + L+
Sbjct: 689 TLAERLERREQRAHELQSAAEAAQRELVAIE-------NRAEQLGREHSTQQARATQLRV 741
Query: 810 ASEPRKDEIDRLEELQKIISAEEKEIEKIVNGSKDLKEKALQLQ---SKVENAGGEKLKA 866
L+ Q + A+ +E + L+E+ +Q++ +K+E +
Sbjct: 742 F----------LDSCQVGLEADRQEQADLAARLGPLREQIVQVREELAKLEQSDNHH--- 788
Query: 867 QKLKVDKIQSDIDKSSTEINRHKVQIETAQKMIKK--LTKGIAESKKEKEQLVEERVKME 924
+ + Q + + TE+ R ++Q+ A+ ++K L + +A+ K++ L+ R+ E
Sbjct: 789 ---RWQQSQQHLRELETEVRRWELQLRHAEADLQKSHLDEQLAQEKRQN--LLSRRLDWE 843
Query: 925 RIFDEILEKAHNVQEHYTNTQKLIDQHRDVLDKAKNDYEKLKKTVDELRASEIEADYKLQ 984
D+ +E +E T + + + EL A E + +L
Sbjct: 844 ---DQKVEFGQREEESRTR------------------LAEFDRVIAELAAQVAELEERLV 882
Query: 985 DLKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQKDLVDPEKLQATLADQTLSDAC--- 1041
D+KR LE G+ ++R L +L++ Q+ L ++ A A Q D
Sbjct: 883 DIKRERDRLEAHGRALQQRQGQL------NLQREQERLHQGQRAAALAAAQERLDELGPP 936
Query: 1042 ---------DLKRTLEMVALLEAQ--LKELNP-NLDSITEYRRKVAAYNERVEDLTTVTQ 1089
DL L Q L+ L P N+ +I EY R E E L T+ +
Sbjct: 937 AEDVPPPPEDLSLEQLQATRLRKQRRLEALEPVNMLAIEEYDRTAERQGELSEKLATLQR 996
Query: 1090 QRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVV 1149
+R ++ + ++ + FM F+A++ + ++ ++ GD L L D +PF+ G+
Sbjct: 997 ERSELLLRIEDCDTLKRSAFMQAFDAVNTHFQSLFAELS-DGDGHLALEDPDNPFAGGLT 1055
Query: 1150 FSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGH 1209
P K + + +SGGEK+L++L+ +FAL Y+P+P Y DE+D LD NV +
Sbjct: 1056 LVAHPRGKQVRRLEAMSGGEKSLTALSFIFALQRYRPSPFYAFDEVDMFLDGANVERLAK 1115
Query: 1210 YVKDRTKDAQFIIISLRNNMFELADRLVGI 1239
V+ + QF+++SLR M E ADR +G+
Sbjct: 1116 MVRQQANSTQFLVVSLRRPMIERADRAIGV 1145
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFG-KRAKQMRLN 78
+ +K + + FKS+ R+ P + F+ V GPNGSGKSN+IDA+LF G ++ MR
Sbjct: 1 MHLKCLEIERFKSFGPYTRI-PLLEGFTVVSGPNGSGKSNIIDALLFALGLSTSRGMRAE 59
Query: 79 KVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISR---VAFRDNSSKY 135
K+S+LIH + V+V F LD A G + + R V +++S Y
Sbjct: 60 KLSDLIHQGAAKGEV---AVTVTFA----LD----AAAGGGELTVCRRLKVNGPNSTSSY 108
Query: 136 YINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDI 195
+N P T++ ++L + ++LQG+V I M + + E ++++
Sbjct: 109 QLNGSPCTLTDLHEELARHHI-YPEGYNVVLQGDVTGIIAMPARER-------REIIDEL 160
Query: 196 IGTDRYVEKIDESYKD 211
G + KI+ + ++
Sbjct: 161 AGVAEFDRKIEAARRE 176
>sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes protein 1A OS=Xenopus laevis
GN=smc1a PE=1 SV=1
Length = 1232
Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 181/726 (24%), Positives = 358/726 (49%), Gaps = 96/726 (13%)
Query: 576 GIYGRMGDLG-AIDAKYDIAVSTAC-PGLDYIVVETTSAAQACVELLRREKLGVATFMIL 633
+YGR+ DL KY IAV+ +D I+V++ + C++ ++ ++ TF+ L
Sbjct: 514 SVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPL 573
Query: 634 EKQVDLFPKMKEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYS 693
+ +++ P E + + D+I+ + +K A A GN LV +++ A RIA+
Sbjct: 574 D-YLEVKP-TDERLRELKGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFG 631
Query: 694 GNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVD 753
G++ + V LDG LF+KSG +SGG S + A+A EK + + +
Sbjct: 632 GHQRHK-TVALDGTLFQKSGVISGGAS--------------DLKAKARRWDEKAVDKLKE 676
Query: 754 NLSRIRQKIADAVKHYQASE-----KAVAH-LEMELAKSRKEIESLKSQHSYLEKQ---- 803
R+ +++ + +K + ++ AH L+M L S+ ++E K++H + Q
Sbjct: 677 KKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLAMNMQEKSK 736
Query: 804 LDSLKAASEPRKDEIDR--------LEELQKIISAEEKEI------EKIVNGSKDLKEKA 849
L+S A PR ++I R +++L++ ++ E E+ E V ++ +E+
Sbjct: 737 LESELANFSPRINDIKRIIQSRDREMKDLKEKMNQVEDEVFEEFCREIGVRNIREFEEEK 796
Query: 850 LQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRHKVQIETAQKMIKKLTKGIAES 909
++ Q+++ E + QK ++ IQ D +K+ + ++ KVQ T ++ +KK I +
Sbjct: 797 VKRQNEIAKKRLE-FENQKTRLG-IQLDYEKNQLKEDQGKVQ--TWEQSVKKDDNEIEKL 852
Query: 910 KKEKEQLVEERVKMERIFDEILEKAHNVQEHY-------TNTQKLIDQHRDVLDKAKNDY 962
KKE+++ + +I DE + + +++ + + L++ R L A +
Sbjct: 853 KKEEQRHM-------KIIDETMAQLQDLKNQHLAKKSEVNDKNHLMEDIRKKLGSANKEV 905
Query: 963 EKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQ-------------- 1008
L+K V + + +L ++ K +++ K +DD+
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQACKMSDIKLPLSKGTMDDISQEEGSSQGEESASS 965
Query: 1009 ----ITLLKHLEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEMVAL------LEAQLK 1058
T+ I+ D D L L D D D+K+ EM AL ++ L+
Sbjct: 966 SQRSSTVYAKEALIEIDYSD---LSEDLKDAVADD--DIKQ--EMSALHQKINEQQSILQ 1018
Query: 1059 ELN-PNLDSITEYRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAIS 1117
++ PN+ ++ + + E ++ ++ K+ +++ +K+R D F A F +++
Sbjct: 1019 RISAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQTKKERFDRFNACFESVA 1078
Query: 1118 LKLKEMYQMITLGGDAE--LELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSL 1175
+ E+Y+ ++ A+ L + +P+ +G+ ++ P K ++ + NLSGGEKT+++L
Sbjct: 1079 TNIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAAL 1138
Query: 1176 ALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRT-KDAQFIIISLRNNMFELAD 1234
AL+FA+H YKP+P +V+DEIDAALD N+ V +Y+K+++ + Q I+ISL+ + A+
Sbjct: 1139 ALLFAIHSYKPSPFFVLDEIDAALDNTNIGKVANYIKEQSMSNFQAIVISLKEEFYTKAE 1198
Query: 1235 RLVGIY 1240
L+G+Y
Sbjct: 1199 SLIGVY 1204
>sp|Q69GZ5|SMC_METVO Chromosome partition protein Smc OS=Methanococcus voltae GN=smc PE=3
SV=1
Length = 1199
Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 179/737 (24%), Positives = 358/737 (48%), Gaps = 90/737 (12%)
Query: 546 AELKSVMDSEK-SQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVSTACPG-LD 603
A +K++ D E S +K +L AK + G+ G+L +Y A+ A L+
Sbjct: 520 ARIKTLKDMENFSLDRAVKGVLDAK----LPGVVDIAGNLAKTKGEYKTAIEVAGGARLN 575
Query: 604 YIVVETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTPENVPRLFDLIKVK 663
+IVV+ + L++++LG ATF+ +++ + K S + + DL++
Sbjct: 576 HIVVKKMDDGSRAINYLKQKRLGRATFLPMDRIKGMDAK---DISDTGIIGKAIDLVEF- 631
Query: 664 DERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSKPR 723
D + F GNT + +L+ A +++ K R VTL+G + E SG M GG +
Sbjct: 632 DIKYTNVFKFIFGNTHIVDNLENAKKLSL---KYKARFVTLEGEVIEPSGAMVGGNIRRN 688
Query: 724 GG-KMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHYQASEKAVAHLEME 782
K+ ++ + +E I E+ LS + D + R+ KI + LE++
Sbjct: 689 SAIKVDIDMKKLTNLSEDIKELEQILSNVKDEIERLNNKINTC---------STRKLELD 739
Query: 783 LAKSRKEIESLKSQHSYLEKQLDSLKAA--SEPRKDEIDR-----LEELQKIISAEEKEI 835
+ LK A E +K+EI + ++EL + S + EI
Sbjct: 740 ----------------------NRLKIARDQEFKKEEITKSNNLKIKELNMLNSKIDDEI 777
Query: 836 EKIVNGSKDLKEKALQLQSKVENAGGEKLKAQKLKVDKIQS----DIDKSSTEINRHKVQ 891
++ + + L +K L +K+ G++ + V++I+S ++ K EI+ HK++
Sbjct: 778 SELTDEKEILSQKVQNLDNKLSEVMGQRERI----VNEIKSYENSELSKRIKEID-HKIR 832
Query: 892 IETAQK--MIKKLTKGIAESKKEKEQLVEERVKMERIFDEILEKAHNVQEHYTNTQKLID 949
+ K + ++ KG K E L+ + ++ + +K + + + I+
Sbjct: 833 ENESSKNTLENEIKKGAILVK---EVLIPKISELNSNIKSLADKKNMFKNSVEIYKSNIE 889
Query: 950 QHRDVLDKAKNDYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQI 1009
+ +L + YE+L K + +L + + ++++L+ + +EL + +++ + +
Sbjct: 890 SNSSILSDKRGKYEELTKGLKDLTDKKECYELEIENLQNNKEELREKATDIDNQVNVINV 949
Query: 1010 TLLKHLEQIQKD---------LVDPEKLQATLADQTLS-DACDLKRTLEMVALLEAQLKE 1059
K+ +++++ L + E + + ++T S + DL+R ALLE+ +K+
Sbjct: 950 DRAKYETRLEEEERKLYLCDTLENIEDISDEMIEETYSLEIDDLERN---QALLESSIKK 1006
Query: 1060 LNP-NLDSITEYRRKVAAYNERVEDLTTVTQQRDDVKKQY----DEWRKKRLDEFMAGFN 1114
L P N+ +I +Y NER E+L ++ + + +Y E +K++ + FM ++
Sbjct: 1007 LEPVNMRAIEDY----DFINERYEELFGKRKEYEQEEGKYLQLISEVQKRKKETFMKTYD 1062
Query: 1115 AISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1174
++ +++Y I GG+ +L L + DPFS G++ P K +N+ +SGGEK+L++
Sbjct: 1063 RVAENYEQIYGEI--GGNGKLSLENEEDPFSGGLLIDASPMNKQLQNLDVMSGGEKSLTA 1120
Query: 1175 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELAD 1234
LA +FA+ P+P YV+DE+DAALD KN S++G + + +K++QFI+IS R M ++
Sbjct: 1121 LAFLFAIQRLNPSPFYVLDEVDAALDTKNASLIGDMISNASKESQFIVISHREQMISKSN 1180
Query: 1235 RLVGIYKTDNCTKSITI 1251
+ G+ + +K +++
Sbjct: 1181 VMYGVCMENGLSKIVSV 1197
>sp|O95347|SMC2_HUMAN Structural maintenance of chromosomes protein 2 OS=Homo sapiens
GN=SMC2 PE=1 SV=2
Length = 1197
Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 301/1298 (23%), Positives = 564/1298 (43%), Gaps = 176/1298 (13%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFG-KRAKQMRLN 78
+ IK +++ FKSYA V F F+A+ G NGSGKSN++D++ F+ G Q+R +
Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 79 KVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQ---GSDFVISRVAFRDNSSKY 135
+ +L++ + + A VS+ F D D + + ++R +KY
Sbjct: 61 NLQDLVYKN-GQAGITKASVSITF----DNSDKKQSPLGFEVHDEITVTRQVVIGGRNKY 115
Query: 136 YINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDI 195
IN +N T V G++++N FLI+QG + ++ MKP P L +E+
Sbjct: 116 LINGVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKP----PE---ILSMIEEA 168
Query: 196 IGTDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIAWRFVCVSVLDV 255
GT Y YK I ++ K + K I + ++ +
Sbjct: 169 AGTRMY------EYKK-------IAAQKTIEKKEAKLKEI-----KTILEEEITPTIQKL 210
Query: 256 KNEAEAYM-----LKELSLLKWQEKATN-LAYEDTSLK----IVELQENVSKLEENLKNE 305
K E +Y+ ++E+ L A L EDT ++ + E+Q+ V KL+E L
Sbjct: 211 KEERSSYLEYQKVMREIEHLSRLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSEN 270
Query: 306 REKIQDNNKTLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKI 365
+KI+ N ++ELE R+ +E LR ++ E +R + K + K+ +
Sbjct: 271 DKKIKALNHEIEELEK------RKDKETGGILRSLEDALAEAQRVNTKSQSAFDLKKKNL 324
Query: 366 -------KKLEVKVEKDSSKIDDLTKECEHATNQIPKLEENIPKLLKLFENVFIADTQNI 418
K+LE + +DS + KE + T+ + L+E K + +A Q
Sbjct: 325 ACEESKRKELEKNMVEDSKTLAAKEKEVKKITDGLHALQEASNK-----DAEALAAAQQ- 378
Query: 419 ITFPFMNMINLCVETERYRSELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEKHEAG 478
N ++ + + +E AT+ ++ + + + K + E + KL + E
Sbjct: 379 ----HFNAVSAGLSSNEDGAE-ATLAGQMMACKND--ISKAQTEAKQAQMKLKHAQQELK 431
Query: 479 RKAFEDAQRQMDDILRRIDTKTTAIRNMQGDLEKNKLEA-MEAHNVEQECFKEQETLIPL 537
K E ++MD R+ A++ + K KLEA M+ N E+ ++E+L+
Sbjct: 432 NKQAE--VKKMDSGYRKDQEALEAVKRL-----KEKLEAEMKKLNYEE---NKEESLLEK 481
Query: 538 EQAARQKVAELKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVST 597
+ + + LK ++ ++ L+ + E N + R G + + + ++
Sbjct: 482 RRQLSRDIGRLKETYEALLARFPNLRFAYKDPEKN-----WNRNCVKGLVASLISVKDTS 536
Query: 598 ACPGLDYI--------VVETTSAAQACVELLRREKLGVATFMILEKQVD---LFP---KM 643
A L+ + VV+T + +LL R +L +I ++ + P ++
Sbjct: 537 ATTALELVAGERLYNVVVDTEVTGK---KLLERGELKRRYTIIPLNKISARCIAPETLRV 593
Query: 644 KEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVT 703
++ P+NV L++ K E K A G T V ++D A ++A+ + R VT
Sbjct: 594 AQNLVGPDNVHVALSLVEYKPELQK-AMEFVFGTTFVCDNMDNAKKVAFD-KRIMTRTVT 651
Query: 704 LDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIA 763
L G +F+ GT+SGG ++ + + T + + + E EL A+ + L+ ++
Sbjct: 652 LGGDVFDPHGTLSGG-ARSQAASILTKFQELKDVQDELRIKENELRALEEELAGLKN--- 707
Query: 764 DAVKHYQASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQ---LDSLKAASEPRKDEIDR 820
A K+ Q + + E+ ++ K Q S KQ LD+LK E ++ +
Sbjct: 708 TAEKYRQLKQ------QWEMKTEEADLLQTKLQQSSYHKQQEELDALKKTIEESEETLKN 761
Query: 821 LEELQKIISAEEK-EIEKIVNGSKDLKEKALQLQSKVENAGGEK---LKAQKLKVDKIQS 876
+E+Q+ AEEK E+ L++K++NA E+ LK + K+D ++
Sbjct: 762 TKEIQR--KAEEKYEV----------------LENKMKNAEAERERELKDAQKKLDCAKT 803
Query: 877 DIDKSSTEINRHKVQIETAQKMIKKLTKGIAESKKEKEQL--VEERVK-----MERIFDE 929
D SS ++ + ++E +++L + E K+QL V E +K +E + E
Sbjct: 804 KADASSKKMKEKQQEVEAITLELEELKR---EHTSYKQQLEAVNEAIKSYESQIEVMAAE 860
Query: 930 IL---EKAHNVQEHYTNTQKLIDQHRDVLDKAKNDYEKLKKTVDELRASEIEADYKLQDL 986
+ E + QE T QK + +D + KAK Y ++ K ++ S+++ ++
Sbjct: 861 VAKNKESVNKAQEEVTK-QKEVITAQDTVIKAK--YAEVAKHKEQNNDSQLKIKELDHNI 917
Query: 987 KRSYKELEMRGKGYKKRLDDLQ-ITLLKHLEQIQKDLVDPEKLQATLADQTLSDACDLKR 1045
+ +E E K L D I +HL D + A Q L ++K
Sbjct: 918 SKHKREAEDGAAKVSKMLKDYDWINAERHLFGQPNSAYDFKTNNPKEAGQRLQKLQEMKE 977
Query: 1046 TLEMVALLEAQLKELNPNLDSITEYRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKR 1105
L + A ++ +TE + YN+ ++ V + + ++ +K+
Sbjct: 978 KLGRNVNMRA--------MNVLTEAEER---YNDLMKKKRIVENDKSKILTTIEDLDQKK 1026
Query: 1106 LDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWK-NIAN 1164
+ ++ ++ + G +A L + +G+ F V +WK N+
Sbjct: 1027 NQALNIAWQKVNKDFGSIFSTLLPGANAMLAPPEG-QTVLDGLEFKV-ALGNTWKENLTE 1084
Query: 1165 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 1224
LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD + +G ++ +QFI++S
Sbjct: 1085 LSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQFIVVS 1144
Query: 1225 LRNNMFELADRLVGIYKTDNCTKSITINPGSFTVCENA 1262
L+ MF A+ L +KT T+ FT C+N
Sbjct: 1145 LKEGMFNNANVL---FKTKFVDGVSTV--ARFTQCQNG 1177
>sp|O94383|SMC1_SCHPO Structural maintenance of chromosomes protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=psm1 PE=1 SV=2
Length = 1228
Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 139/224 (62%), Gaps = 24/224 (10%)
Query: 1049 MVALLEAQLKELNPNLDSITEYRRKVAAYNERVEDLTTVTQQRDD-----------VKKQ 1097
M ++L+ +L+E + LD ++ R + ER+E + T + D+ K++
Sbjct: 1003 MASVLQEKLREYSEELDQMSPNLRAI----ERLETVETRLAKLDEEFAAARKAAKNAKER 1058
Query: 1098 YDEWRKKRLDEFMAGFNAISLKLKEMYQMIT------LGGDAELELVDSLDPFSEGVVFS 1151
++ ++KRL +F A F+ IS ++ +Y+ +T LGG A L L D +P+ G+ F
Sbjct: 1059 FNAVKQKRLQKFQAAFSHISEQIDPIYKELTKSPAFPLGGTAYLTLDDLDEPYLGGIKFH 1118
Query: 1152 VRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYV 1211
PP K ++++ LSGGEKT+++LAL+FA+H Y+P+P +V+DEIDAALD NV+ + +Y+
Sbjct: 1119 AMPPMKRFRDMDQLSGGEKTMAALALLFAIHSYQPSPFFVLDEIDAALDQTNVTKIANYI 1178
Query: 1212 KDRTKDA-QFIIISLRNNMFELADRLVGIYK--TDNCTKSITIN 1252
+ QF++ISL+N +F ++ LVGIY+ +N +++++IN
Sbjct: 1179 RQHASSGFQFVVISLKNQLFSKSEALVGIYRDQQENSSRTLSIN 1222
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 27 MRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHN 86
+ NFKSY G Q +GPF + F++++GPNG+GKSN++DA+ FV G ++ +R V ELI+
Sbjct: 9 VENFKSYRGHQIIGPF-EDFTSIIGPNGAGKSNLMDAISFVLGVKSSHLRSTNVKELIYR 67
Query: 87 ST-----NYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYINDRP 141
N DS+ + + +++ YE G R +++Y I++
Sbjct: 68 GKILQRDNTDFTDSSNPTTAYVKLM------YELDNGEQREYKRAITPSGATEYKIDEEI 121
Query: 142 SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKP 178
F+E L+ + + + FL+ QG+VE I+ P
Sbjct: 122 VTFSEYCGSLQKENILVRARNFLVFQGDVETIASQSP 158
>sp|Q8KBS6|SMC_CHLTE Chromosome partition protein Smc OS=Chlorobium tepidum (strain ATCC
49652 / DSM 12025 / TLS) GN=smc PE=3 SV=1
Length = 1183
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 286/1262 (22%), Positives = 539/1262 (42%), Gaps = 176/1262 (13%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFG-KRAKQMRLN 78
+++ ++ + FKS+A R+ F K +A+VGPNG GK+NV+DA+ +V G +++ +R
Sbjct: 1 MYLSKIELFGFKSFAHRVRIH-FDKGLTAIVGPNGCGKTNVVDAIRWVLGEQKSMLLRSP 59
Query: 79 KVSELIHNST-NYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYI 137
K+ +I N T + L VS+ + ++ Y ++ ++R +R+ S Y +
Sbjct: 60 KMENIIFNGTKRLKPLSFTEVSITIENTRNILPTEY-----TEVTVTRRLYRNGDSDYLL 114
Query: 138 NDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIG 197
N P ++ G+ D + L+ E IS E L+ E+ G
Sbjct: 115 NMVPCRLKDILDLFADTGMGSDAYSVIELKMIEEIIS--------NKSEERLKLFEEAAG 166
Query: 198 TDRYVEKIDESYKDY-VVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIAWRFVCVSVLDVK 256
RY ++ ++++ DL ++ + V + L Q +K
Sbjct: 167 ITRYKQRRKQTFRQLESASRDLARVDDVLAEVEKKVRNLRLQVRK--------------- 211
Query: 257 NEAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLE---ENLKNEREKIQDNN 313
A LKE+ +E+ L D +L + + E++ KL +++ E + +
Sbjct: 212 ----AERLKEI-----REELRTL---DLTLSAISMDEHLQKLRPLLDSIAAEERQCHELA 259
Query: 314 KTLKELESVHNKYMRRQEELDN-------DLRVSKEEFKEFERQDVKYREDSKHMKQKIK 366
T+ +L+S H + RQ EL+ +L S + E+Q ++++E K++ Q I+
Sbjct: 260 ATIAKLDSAHQESELRQLELERKLADAQKELNASNQLVHTLEKQLLQHKEKQKNLLQTIE 319
Query: 367 KLEVKV-EKDSSKIDDLTKECEHATNQIPKLEENIPKLLKLFENVFIADTQNIITFPFMN 425
+L + +K +++ E + Q P L+E L FE + Q + ++
Sbjct: 320 RLNYSIADKGRKRLEQEALSKELSEKQTP-LQEVCTAQLAEFERL---KKQEVELNSALD 375
Query: 426 MINLCVETERYR-SELATVRAELEPWEKELIVHKGKLEVTCTESKLLCEKHEAGRKAFED 484
+++ER +EL L + L K LE + L ++ ++ E
Sbjct: 376 ASRQALQSERRAVAELQKSLNALNLTRQSLRTRKEHLEGSVNR---LDQRKRDLERSMEQ 432
Query: 485 AQRQMDDILRRIDTKTTAIRNMQGDLEKNKLEAMEAHNVEQECFKEQETLIPLEQAARQ- 543
A+ + I+ K A+ ++ E+ +L A++A EQ K++E L+ L+
Sbjct: 433 AEPERRRTSEAIEEKKIALDELKK--EEERLVALKASITEQ-SEKKKEELLSLKSEHNHL 489
Query: 544 --KVAELKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVSTAC-P 600
++A S++ EK +G K+ G+ G + DL ++ A++ A
Sbjct: 490 NNRIALCNSIL--EKFEGLPEGVAFLEKQRAGKPGL-GCLSDLISVRENDKKAINAALGE 546
Query: 601 GLDYIVVETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTPENVPRLFDLI 660
L Y + A+ V L + G F+IL+ +D K+ ++ E R DL+
Sbjct: 547 SLGYYLCRNLEEARLAVSSLAKADKGKVHFLILD-LIDGGAKID--YAEIEGARRAIDLV 603
Query: 661 KVKDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGS 720
+ E K A + + V DLD A ++ + +T G F + G + GG +
Sbjct: 604 ETPAELSK-ALNLLLQHCYVVADLDAAEQLGKKHPEAL--FITEKGEKFTRRGMLYGGSA 660
Query: 721 KP----RGGKMGTSIR---PTSVSAEAIINAEKELSAMVDNLS-----RIRQKIADAVKH 768
K R GK R + AE I AE L+ + S R+++ A +
Sbjct: 661 KGGESVRLGKKAERDRLQKQMAGMAETIAEAENALAVLRKEFSAIDTERVKRAAASISQE 720
Query: 769 YQASEKAVAHLEME-------LAKSRKE----IESLKSQHSYLEK-QLDSLKAASEPRKD 816
A EK +A LE E +A + +E I S++S LEK Q ++L+ +E
Sbjct: 721 ISALEKRLARLEAEERSGADQIAHADRERTALIASMQSVLDELEKTQPETLRIEAE---- 776
Query: 817 EIDRLEELQKIISAEEKEIEKIVNGSKDLKEKALQLQSKVENAGGEKLKAQKLKVDKIQS 876
+E Q+ ++ ++E+ + S+ L + Q + +A + L+ + + Q
Sbjct: 777 ----IETAQQKVNVMQEELSAGESRSRALHAELQAQQGRYRDAQLD-LEKHRFRASACQQ 831
Query: 877 DIDKSSTEINRHKVQIETAQKMIKKLTKGIAESKKEKEQLV-------EERVKMERIFDE 929
I S EI + QI A+K + +L + IA++ E EQ V E ++E + +
Sbjct: 832 TIVTLSDEIEGMQHQIARAEKEVAELGQSIAQATAEHEQAVVVSARQQEALNELESSYRD 891
Query: 930 ILEKAHNVQEHYTNTQKLIDQHRDVLDKAKNDYEKLKKTVDELRASEIEADYKLQDLKRS 989
+ K H+ + + ++ D + +L + N KL++ + L+A+ +E R
Sbjct: 892 LQTKNHDTLSNLRDLRRKHDLSQQMLAEFNNRKAKLEQEIAHLQATVME---------RY 942
Query: 990 YKELEMRGKGYKKRLDDLQITLLKHLEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEM 1049
ELEM + H+ PE D+ + E
Sbjct: 943 GVELEM---------------MPAHV---------PEGF-------------DVAASRER 965
Query: 1050 VALLEAQLKELNP-NLDSITEY---RRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKR 1105
+A L+ Q ++ N ++ EY + ++ + EDL + +Q +++ +E +
Sbjct: 966 LAYLQKQKEQFGGVNELALEEYESEKERLDFLTAQKEDLVSAEKQ---LRETIEEINRTA 1022
Query: 1106 LDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSL---DPFSEGVVFSVRPPKKSWKNI 1162
L++F FN + ++ + + E++L+ + DP + +P K I
Sbjct: 1023 LEKFRETFNQVRKNFIRIFHDL-FDPEDEVDLLITTSDEDPLEAHIQIVAKPRGKKPLAI 1081
Query: 1163 ANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFII 1222
LSGGEK L++L+L+FA++ KP+P ++DE+DA LD NV +K + QFII
Sbjct: 1082 EQLSGGEKALTALSLLFAIYLVKPSPFCILDEVDAPLDDANVGRFIKLLKKFENNTQFII 1141
Query: 1223 IS 1224
++
Sbjct: 1142 VT 1143
>sp|Q9HK21|SMC_THEAC Chromosome partition protein Smc OS=Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=smc PE=3 SV=1
Length = 1140
Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 230/1036 (22%), Positives = 451/1036 (43%), Gaps = 164/1036 (15%)
Query: 300 ENLKNEREKIQDNNKTLKELESV-HNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDS 358
E L+ E+EK + + LK V + + + R+ ++ R + + + ++ + E
Sbjct: 196 ERLRTEKEKKERYDALLKRKRDVEYTEILNRKNAMERQKRTIEGQISDLTKEIAQLEERR 255
Query: 359 KHMKQKIKKLEVKVEKDSSKIDDLTK-ECEHATNQIPKLEENIPKLLKLFENVFIADTQN 417
++++ + + ++ E + +IDDLT E + +E +I K+ +
Sbjct: 256 SDLEKRSEAIRIRREDVAKRIDDLTSGEMNRVKTDLHSVEVDIAKI------------RG 303
Query: 418 IITFPFMNMINLCVETERYRSELATVRAELEPWEKEL---IVHKGKLEVTCTE------- 467
II NM L +Y SE + E+E ++++ K LE +
Sbjct: 304 IIDEKNRNMEKLEETIAKYESERDSTDREIEDLDRQIEEKAKRKRALEDRYADLKKRYDD 363
Query: 468 --SKLLCEKHEAG--RKAFEDAQRQMDDILRRIDTKTTAIRNMQGDLEK--NKLEAMEAH 521
S+ E +A R+ ++ Q ++D + R I+ A M DL K A+E
Sbjct: 364 LFSRAQAEAVDAAETRRKSKEYQEKIDGLGREIEELKAAGSQMNADLAVLLQKKAALEER 423
Query: 522 N------VEQECFKEQETLIPLEQAARQKVAELKSVMDSEKSQGSVLKAILQAKESN--- 572
+ +K +ET + + +R K +LK+ D + S LK+ + KE++
Sbjct: 424 KEDLDLKIRTSEWKAKETSEDMGKYSR-KYYDLKAKYDQINDRISDLKSEISEKEASAKI 482
Query: 573 -----------------QIEGIYGRMGDLGAIDAKYDIAVSTACPG-LDYIVVETTSAAQ 614
+EG+ G + DL + KY AV +A G L+ +VV+ + A+
Sbjct: 483 ASSRVPEYVRNVKMLEESVEGVIGLVRDLISYGEKYVKAVESAGGGRLNAVVVKDDAVAK 542
Query: 615 ACVELLRREKLGVATFMILEKQVDLFPKMKEHFST----PENVPRLFDLIKVKDERMKLA 670
C+++L+ K+ TF+ L K D P + P + L D + +D+ + A
Sbjct: 543 ECIQILKDRKISPMTFLPLNKMRD--PPAQRDVGKISKDPGYLGILMDFVDFEDQ-YRSA 599
Query: 671 FYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTS 730
Y A+ +T++ +D+D R+ R+VTLDG +F+ G+++GG + ++
Sbjct: 600 VYYAIRDTILVQDIDAGRRLM-----GIFRLVTLDGDIFDPGGSITGG-YRNYASDYASA 653
Query: 731 IRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHYQASEKAVAHLEMELAKSRKEI 790
+R + + +LS+++D+ SRI++++ A + + + E +KE
Sbjct: 654 LRMQ----HDLEGMKIQLSSLMDDRSRIKREMDQAFSEMSEASRRTGEIMKEQEMLKKEA 709
Query: 791 ESLKSQHSYLEKQLDSLKAASEPRKDEIDRLEELQKIISAEEKEIEKIVNGSKDLKEKAL 850
E + + L++ +D + + D+ ++E +K+I + ++ K DL ++
Sbjct: 710 ERSREE---LKQVMDDISSTDRAIADKKRMIDENEKVIEQKTLDLHKYQEALNDLYDR-- 764
Query: 851 QLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRHKVQIETAQKMIKKLTKGIAESK 910
++ + + ++++++S+ID ++E+N QI + + ++ +E K
Sbjct: 765 -----IDPEFFKNIGDLSNEINEVRSEIDAVASELN----QITSRRDILS------SERK 809
Query: 911 KEKEQLVEERVKMERIFDEILEKAHNVQEHYTNTQKLIDQHRDVLDKAKNDYEKLKKTVD 970
++Q+++ +++ I EI L + R++ +KAK Y+
Sbjct: 810 HLEDQMIDTKLQENSIAAEI--------------DDLNGKKRELEEKAKK-YQ------- 847
Query: 971 ELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQ--ITLLKHLEQIQKDLVDPEKL 1028
Y L DL+ Y L + + K++ +++ I K ++ DL++ K+
Sbjct: 848 ----------YALNDLEGRYGNLSAQVREADKQIREMENGINDAKASIDLKNDLMNDLKV 897
Query: 1029 QATLADQTLSDACDLKRTLEMVALLEAQLKELNPNLDSITEYRRKVAAYNERVEDLTTVT 1088
+A + + LS ++R L + EA + +L I + N
Sbjct: 898 KAGILEGNLSS---IERELSSYSGCEAVIGDLQAMRQEIERAIMDLGEIN------NAAP 948
Query: 1089 QQRDDVKKQYDEWRKKR----------------LDE-----FMAGFNAISLKLKEMYQMI 1127
QQ +D K D++ KK L+E F+ F IS K+ +Y +I
Sbjct: 949 QQYEDALKDLDDYEKKHEKLMEEKKALEETTAMLNEKKREVFVKTFTDISEKMNYVYGII 1008
Query: 1128 TLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPT 1187
GG A+L ++ S DP + V SV P K+ I LSGGEK++++L+ + A+ P+
Sbjct: 1009 N-GGTAKLIMIGS-DPLTSSVEVSVTPKDKATVKIQALSGGEKSVAALSFITAVQILMPS 1066
Query: 1188 PLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTK 1247
+Y +DE+D LD N + + +AQ I+ISL++ +F A +G+ T +
Sbjct: 1067 SIYFLDEVDMYLDAYNAENMIKMISQNAGEAQTIVISLKSLVFSYASNAIGV--TSVNGE 1124
Query: 1248 SITINPGSFTVCENAA 1263
S N G F AA
Sbjct: 1125 SFVFN-GHFDGSPEAA 1139
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 181/404 (44%), Gaps = 55/404 (13%)
Query: 21 FIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRA-KQMRLNK 79
+I+ + NFKS+ ++V F K + + GPNGSGKSN+ D +LFV G ++ +R ++
Sbjct: 4 YIERIEAHNFKSFR-RKKVINFTKGLNVISGPNGSGKSNIGDMLLFVLGTKSIHAVRADR 62
Query: 80 VSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNS-SKYYIN 138
+S+L+ + + VSV F+ DDG I+ R+ D S YY+N
Sbjct: 63 LSDLVSKGSG----NECSVSVTFRS----DDGRSLVIE------RRLVIEDEPKSYYYVN 108
Query: 139 DRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIGT 198
S +E+ + L G++ F +LQG++ + GQ + +E I G
Sbjct: 109 GVRSRLSEIDETLASMGINFGTYSF-VLQGDIN--DFISYSGQERR-----KLIERISGV 160
Query: 199 DRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQR---KKEIAWRFVCVSVLDV 255
D++ +I+ D + + N + + K N +R +KE R+ +L
Sbjct: 161 DQFDSEIERVKAD----IEAVSRNMEINQTIIDEKRQNLERLRTEKEKKERYDA--LLKR 214
Query: 256 KNEAE-AYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNEREKIQDNNK 314
K + E +L + ++ Q++ D + +I +L+E S LE+ + R + +D K
Sbjct: 215 KRDVEYTEILNRKNAMERQKRTIEGQISDLTKEIAQLEERRSDLEKRSEAIRIRREDVAK 274
Query: 315 TLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKIKKLEVKV-- 372
+ +L S ++ K + E K R + ++KLE +
Sbjct: 275 RIDDLTS-------------GEMNRVKTDLHSVEVDIAKIRGIIDEKNRNMEKLEETIAK 321
Query: 373 ---EKDSS--KIDDLTKECEHATNQIPKLEENIPKLLKLFENVF 411
E+DS+ +I+DL ++ E + LE+ L K ++++F
Sbjct: 322 YESERDSTDREIEDLDRQIEEKAKRKRALEDRYADLKKRYDDLF 365
>sp|Q5N0D2|SMC_SYNP6 Chromosome partition protein Smc OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=smc PE=3 SV=2
Length = 1195
Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 113/202 (55%), Gaps = 2/202 (0%)
Query: 1053 LEAQLKELNP-NLDSITEYRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMA 1111
L +++ + P N+ ++ EY R A E E LTT+ +R ++ + + + R FM
Sbjct: 993 LAKRIQAMEPVNMLALEEYERTQARLEELSEKLTTIEAERTELLLRIENFTTLRRRAFME 1052
Query: 1112 GFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKT 1171
F AI +E++ ++ GD L+L + DPFS G+ P K + +A++SGGEK+
Sbjct: 1053 SFEAIDRNFQEIFAHLS-DGDGSLQLDNPEDPFSSGLNLIAHPKGKPVRRLASMSGGEKS 1111
Query: 1172 LSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFE 1231
L++L+ +FAL Y+P+P Y +DE+D+ LD NV + ++ + + AQFI++S R M E
Sbjct: 1112 LTALSFIFALQRYRPSPFYALDEVDSFLDGANVERLARVIRQQAQAAQFIVVSHRRPMIE 1171
Query: 1232 LADRLVGIYKTDNCTKSITINP 1253
A+R +G+ + + P
Sbjct: 1172 AAERTIGVTQARGAHTQVLGIP 1193
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFG-KRAKQMRLN 78
++IK++ + +FKS+ G + P F+ V GPNGSGKSN++DA+LF G +K MR +
Sbjct: 2 VYIKQIELSHFKSFGGTTSL-PLLPEFTVVTGPNGSGKSNILDALLFALGLSSSKGMRAD 60
Query: 79 KVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYIN 138
++ +L+ NST Y + + V LDD ++ + +++ ++
Sbjct: 61 RLPDLV-NST-YASRSRSTVETLVTVTFALDD--WQPEAEETEEGEGTGLQPGMAEWTVS 116
Query: 139 DR----PSNFTEVTKKLKGKGVDLDN-----NRF--------LILQGEVEQISLMKPK 179
+ PS T + G+ L +R ++LQG+V I M P+
Sbjct: 117 RKLRVTPSGTYTSTYAMNGEACTLQQLHEQLSRLRIYPEGYNVVLQGDVTNIISMSPR 174
>sp|P73340|SMC_SYNY3 Chromosome partition protein Smc OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=smc PE=3 SV=1
Length = 1200
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 157/290 (54%), Gaps = 18/290 (6%)
Query: 955 LDKAKNDYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITLLKH 1014
L K + ++L+ +++LR+ + E ++ + L+ + +E Y++ L LQ
Sbjct: 909 LGSTKQERDRLETQLNQLRSQQQEQQWQWEKLQTNQQE-------YQENLTQLQT----Q 957
Query: 1015 LEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEMV--ALLEAQ--LKELNP-NLDSITE 1069
LE +++DL DP L D+ ++ D LE + ++ Q L+ + P N+ ++ E
Sbjct: 958 LEALEQDLPDPWPEIPLLQDRDEAN-LDFANILEELERSIRNGQKRLEAMEPVNMLALQE 1016
Query: 1070 YRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITL 1129
Y + A E E L T+ +R ++ + + + R F F+A++ + ++ ++
Sbjct: 1017 YEKTEARLGELSEKLQTIAGERTELLLRIENFTTLRRRSFQDAFDAVNKNFQIIFAELS- 1075
Query: 1130 GGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPL 1189
GD L+L D+ DPF+ G+ P K + ++++SGGEK+L++L+ +FAL Y+P+P
Sbjct: 1076 DGDGYLQLDDAEDPFNGGLNLVAHPKGKPVRRLSSMSGGEKSLTALSFIFALQRYRPSPF 1135
Query: 1190 YVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 1239
Y DE+D LD NV + V+ + + AQFI++SLR M E A+R +G+
Sbjct: 1136 YGFDEVDMFLDGANVEKLSKMVRKQAQQAQFIVVSLRRPMIEAAERTIGV 1185
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 25/179 (13%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFG-KRAKQMRLN 78
+++K + + +FKS+ G + PF F+ V GPNGSGKSN++DA+LF G +K MR
Sbjct: 2 VYVKRIELSHFKSFGGTTAI-PFLPGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE 60
Query: 79 KVSELIHNSTNYQNLDS-AGVSVHFQEIVDLDDG--------------TYEAIQGSDFVI 123
++ +L++N+ S A VSV F +L DG I V
Sbjct: 61 RLPDLVNNTFKGNRGSSEASVSVTF----ELHDGENLSEPGANHNGNGNGAKISKEWTVT 116
Query: 124 SRVAFR---DNSSKYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK 179
R+ + SS YYIN + TE+ ++L + + ++LQG+V +I M K
Sbjct: 117 RRLKVTKGGNYSSNYYINGETATVTELHEQLNELRIYPEGYN-IVLQGDVTRIITMNSK 174
>sp|Q00737|SUDA_EMENI Chromosome segregation protein sudA OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=sudA PE=2 SV=3
Length = 1215
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 167/753 (22%), Positives = 311/753 (41%), Gaps = 137/753 (18%)
Query: 548 LKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDLGAIDAKYDIAVS-TACPGLDYIV 606
L +MD S+G + A+ + K + +EG+YG + +L ++ +Y AV TA L + V
Sbjct: 513 LSQMMDHNTSRG--IAAVRRIKRQHNLEGVYGTLAELFEVNDRYRTAVEVTAGQSLFHYV 570
Query: 607 VETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKEHFSTPENVPRLFDLIKV---- 662
V+T A +E+L+ EK G TFM L + L K P N+P+ D I +
Sbjct: 571 VDTDDTATKVLEILQHEKAGRVTFMPLNR---LRTK-------PLNMPKASDTIPMIEKL 620
Query: 663 -KDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSK 721
D + AF G T++ +L A++ A S T +G +K G ++GG
Sbjct: 621 QYDRAYEKAFQHVFGKTIICPNLQVASQYARSHGVN---ATTPEGDRSDKRGALTGGFHD 677
Query: 722 PRGGKMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIADAVKHYQASEKAVAHLEM 781
R ++ DAVK+
Sbjct: 678 SRQSRL------------------------------------DAVKN------------- 688
Query: 782 ELAKSRKEIESLKSQHSYLEKQLDSLKAASEPRKDEIDRLEELQKIISAEEKEIEKIVNG 841
LAK R E E+ KS+ S + K+L+ L E+ +LE+ + + + + +
Sbjct: 689 -LAKWRDEYETKKSRGSEIRKELEELDQLITRAVGELQKLEQQRHQVQNSSGPLRQELRS 747
Query: 842 SKDLKEKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINR--HKVQIETAQKMI 899
+DL LQ Q+ +A L+ + + ++ +D E++ HK + + +
Sbjct: 748 KRDL----LQKQNDNLDAKRRALRNIEGNLAALKDQVDAFEAELSSPFHKALTDEEEARL 803
Query: 900 KKLTKGIAESKKEKEQLVEERVKMERIFDEILEKAHNVQEHYT-NTQKLIDQHRDVLDK- 957
+ L + E ++E ++L +R ++E +LE ++E+ +L+ Q D+ D+
Sbjct: 804 ESLNSNVQEYRREYQELSGKRSELE-TRKSVLEV--ELRENLNPRLDQLLAQDADIADED 860
Query: 958 -------AKNDYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQIT 1010
+ + ++L K +D+L + D ++ EL R ++ L++L +
Sbjct: 861 GQGNIKETQREQKRLTKVLDKLAQRLAQVDESMEQANSRVTELTQRNAESRRELEELAKS 920
Query: 1011 LLKHLEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEMVALLEAQLKELNPN-----LD 1065
+ KH +++K + + +A L Q A +++ + + K + N L
Sbjct: 921 IEKHQRRMEKSM----QKKAALTKQAAECAANIRDLGVLPDEAFTKYKNTDSNTVVKKLH 976
Query: 1066 SITEYRRKVAAYNERV-EDLTTVTQQRDDVKKQYDEW--RKKRLDEFMA----------- 1111
+ E +K A N++ E T+QR+ + + +E +K +D+ ++
Sbjct: 977 KVNEALKKYAHVNKKAFEQYNNFTKQRETLTSRREELDASQKSIDDLISVLDHRKDEAIE 1036
Query: 1112 -GFNAISLKLKEMYQMITLGGDAELELVDSLDPFSE----------------------GV 1148
F +S + +++ + G L + D G+
Sbjct: 1037 RTFKQVSREFATIFEKLVPAGRGRLIIQRKTDRTQRAEDDLESEDEEAKHSVENYVGVGI 1096
Query: 1149 VFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVG 1208
S + I LSGG+K+L +LALVFA+ P P Y+ DEIDA LD + + V
Sbjct: 1097 SVSFNSKHDDQQRIQQLSGGQKSLCALALVFAIQACDPAPFYLFDEIDANLDAQYRTAVA 1156
Query: 1209 HYVK--DRTKDAQFIIISLRNNMFELADRLVGI 1239
+K + + QFI + R M +A++ G+
Sbjct: 1157 QMLKTISDSTNGQFICTTFRPEMLHVAEKCYGV 1189
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 14/191 (7%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNK 79
+++K+++++ FKSY + + PF + +VG NGSGKSN A+ FV + +
Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLSDAYTHLGREE 60
Query: 80 VSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYIND 139
L+H + SA +S + + I D D + G ++ R +Y ++
Sbjct: 61 RQALLHEGSG-----SAVMSAYVEIIFDNSDERFPT--GKPELVLRRTIGLKKDEYTLDR 113
Query: 140 RPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIGTD 199
+ + +V L+ G N +++ QG V ++ MK D L L+++ GT
Sbjct: 114 KNATKNDVMNLLESAGFSRSNPYYIVPQGRVTALTNMK-------DSERLNLLKEVAGTQ 166
Query: 200 RYVEKIDESYK 210
Y + ES K
Sbjct: 167 VYEARRAESLK 177
>sp|P41003|SMC2_SCHPO Structural maintenance of chromosomes protein 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cut14 PE=1 SV=2
Length = 1172
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 154/609 (25%), Positives = 282/609 (46%), Gaps = 68/609 (11%)
Query: 657 FDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMS 716
+LI DE + A G+TLV + A ++ + + + + V TLDG +++ SGT++
Sbjct: 608 LELIGYDDELLP-AMQYVFGSTLVCDTPESAKKVTFHPSVKLKSV-TLDGDVYDPSGTLT 665
Query: 717 GGGSKPRGGKMGTSIRPTSVSAE-AIINAEKE-LSAMVDNLSRIRQKIADAVKHYQASEK 774
GG G + + S+ + ++ +E E L + +L K +A H E
Sbjct: 666 GGSVNKSAGPLLQIQKLNSLQLKLQVVTSEYEKLETQLKDL-----KTQNANFHRLEQEI 720
Query: 775 AVAHLEMELAKSRKEIESLKSQHSYLEKQLDSLKAASEPRKDEIDRLEELQKIISAEEKE 834
+ E+ L ++E +S S+ + L + + KD RL EL ++I ++
Sbjct: 721 QLKQHELTLLIEQRETDS-----SF--RLLSDYQQYKDDVKDLKQRLPELDRLILQSDQA 773
Query: 835 IEKIVNGSKDLKEKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRHKVQIET 894
I+KI +D++E SK+ E K K+D+ ++KS + N K++ E
Sbjct: 774 IKKI---ERDMQEWKHNKGSKMAELEKE-FNQYKHKLDEFTPILEKSENDYNGVKLECEQ 829
Query: 895 AQKMIKKLTKGIAESKKEKEQLVEERVKMERIFDEILEKAHNVQEHYTNTQKLIDQHRDV 954
+ E + ++ LV+ I EI E ++ N +KL + +
Sbjct: 830 LE----------GELQNHQQSLVQGESTTSLIKTEIAELELSLVNEEHNRKKLTE----L 875
Query: 955 LDKAKNDYEKLKKTVDELRAS------EIE-ADYKLQDLKRSYKELEMRGKGYKKRLDDL 1007
++ + L K +D L S EI + +Q L + LE R +
Sbjct: 876 IEIESAKFSGLNKEIDSLSTSMKTFESEINNGELTIQKLNHEFDRLE--------REKSV 927
Query: 1008 QITLLKHLEQIQKDLVDPEKL----QATLADQTLSDACDLKRTLEMVALLEAQL----KE 1059
IT + HLE+ + D +D +K Q T+ D + ++++ E + L+ + K
Sbjct: 928 AITAINHLEK-ENDWIDGQKQHFGKQGTIFD---FHSQNMRQCREQLHNLKPRFASMRKA 983
Query: 1060 LNPN-LDSITEYRRKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISL 1118
+NP +D I +K A ++ + ++ D K D +++ L++ N+
Sbjct: 984 INPKVMDMIDGVEKKEAKLRSMIKTIHRDKKKIQDTVKSIDRFKRSALEKTWREVNS--- 1040
Query: 1119 KLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKN-IANLSGGEKTLSSLAL 1177
E++ + G AEL+ ++ + F++G+ V+ WK+ +A LSGG+++L +LAL
Sbjct: 1041 SFGEIFDELLPGNSAELQPPENKE-FTDGLEIHVKIGS-IWKDSLAELSGGQRSLVALAL 1098
Query: 1178 VFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLV 1237
+ +L YKP P+Y++DEIDAALD + +G +K + K +QFII+SL+ MF A+RL
Sbjct: 1099 IMSLLKYKPAPMYILDEIDAALDLSHTQNIGRLIKTKFKGSQFIIVSLKEGMFTNANRLF 1158
Query: 1238 GIYKTDNCT 1246
+ D +
Sbjct: 1159 HVRFMDGSS 1167
>sp|Q1INB1|SMC_KORVE Chromosome partition protein Smc OS=Koribacter versatilis (strain
Ellin345) GN=smc PE=3 SV=1
Length = 1308
Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 211/1022 (20%), Positives = 421/1022 (41%), Gaps = 166/1022 (16%)
Query: 295 VSKLEENLKNEREKIQDNNKTLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKY 354
++ LE L E+I ++++++ H + ++R +D + + ++E R+ +
Sbjct: 352 IAGLEAELTTVTEEIATRTDAVQQMDNEHGERVQRGYAIDAEAKQNRESLNNVSREMDRA 411
Query: 355 REDSKHMKQKIKKLEVKVEKDSSKIDDLTKECEHATNQIPKLEENIPKLLKLFE----NV 410
+ + +++ +L + ++I ++ T Q+ +LEE + ++ E +V
Sbjct: 412 AQRRRTNEERCAELVARSAGAEAEI-------QNTTEQLGRLEEELATNRQVLESAAADV 464
Query: 411 FIADT-----QNIITFPFMNMINLCVETERYRSEL-------ATVRAELEPWEKELI--- 455
+A + Q + N++N+ E E+ RS++ + VR + E+ +
Sbjct: 465 AVAQSDLQTKQQEASAAAANLMNVEREQEQRRSQIFQAVNAASNVRNRITQAEERIANLD 524
Query: 456 VHKGKLEVTCTESKLLCEKHEAGRKA----FEDAQRQMDDILRRIDTKTTAIRNMQGDLE 511
G++ + + L E R FE A R++ ++ I + +G L+
Sbjct: 525 REHGRVTGELSSATLQLESFGGQRGQLGLEFESANT-------RVNALSSEITDARGSLQ 577
Query: 512 KNKLEAMEAHNVEQECFKEQETLIPLEQAARQKVAELKSVMDSEKSQGSVLKAILQA--- 568
+ + E +EA E TL+ K L+SV++ +K + Q+
Sbjct: 578 QKRQEEIEAKRHVDTLRAEYATLLG-------KKGSLESVINEHGYSTESVKRLFQSGGL 630
Query: 569 KESNQIEGIYGRMGDLGAIDAKYDIAVSTACPG-LDYIVVETTSAAQACVELLRREKLGV 627
+E N G+ + D ++ KY+ V L+Y+VV++ AA + LL+ + G
Sbjct: 631 REGNTPAGV---LADFLEVEDKYEHVVEDFLRDELNYVVVKSWGAADEGLRLLKGDVDGR 687
Query: 628 ATFMILEKQVD------LFPKMKEHFSTPENVPRLFDLIKVKDERMKL--AFYAAMGNTL 679
ATF++ L M+ F TP+ V + + I+V + K +GN
Sbjct: 688 ATFLVHPSDSQAKFSFVLDESMRLPF-TPDRVTPMKNCIRVLNGFGKSLEVVLPKLGNGY 746
Query: 680 VAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAE 739
+ D +A F ++ G F T++GG + +G P S+ E
Sbjct: 747 IVPDPAIGRELALENPDAF--FLSQSGECFHNV-TVTGGKQRSQG--------PLSLKRE 795
Query: 740 --------------------AIINAEKELSAMVDNLSRIRQKIADAVKHYQASEKAVAHL 779
++ KE++ + L R+ + + K S + L
Sbjct: 796 LRDVMRCIDDVERSLRDGEARVLMLGKEIAELTSLLQRLEDEKREGEKQAMTSGHTLRQL 855
Query: 780 EMELAKSRKEIESLKSQHSYLEKQLDSLKAASEPRKDEIDRLEELQKIISAEEKEIEKIV 839
E E+A+ ++ +H+ E++L + R++ I L + A +E+E +
Sbjct: 856 ENEMAR-------VRDRHATYERELQRVSNEKSERENAIGGLRMELEAAEARHQELEAAM 908
Query: 840 NG-SKDLKEKALQLQSKVENAGG-------------EKLKAQKLKVDKIQSDIDKSSTEI 885
N ++ L E L++ +NA E+ +A + +I+S + + S I
Sbjct: 909 NAATQSLDE----LRTARDNASHAASEARAQAAALEERHRAAASSLQRIESMVQEVSARI 964
Query: 886 NRHKVQIETAQKMIKKLTKGIAESKKEKEQLV---EERVKMERIFDEILEKAHNVQEHYT 942
+ K Q+E+A ++ +E++ EQLV ER E E+ ++ V+
Sbjct: 965 GKLKGQVESAAAEKQQRE---SENETIAEQLVTWTAEREAAEARDRELQTESEQVRARIA 1021
Query: 943 NTQKLIDQHRDVLDKAKNDYEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKK 1002
++ + R LD A++ +L +V L++
Sbjct: 1022 EIEEELKTARQALDAARDRRGELHASVARLQSDG-------------------------- 1055
Query: 1003 RLDDLQITLLKHLEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEMVALLEAQLKELNP 1062
+ + T ++ L + DL+ E+L D+ + K + +L+ + P
Sbjct: 1056 --EHMAETCVQELSVTRPDLMAIEELPRLTGDELAVADTEQKD-------MRTKLENMGP 1106
Query: 1063 -NLDSITEYRRKVAAYNERVE----DLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAIS 1117
N+ ++ EY+ + A +E +E DL + + K+ D+ K + DE F AI+
Sbjct: 1107 VNMMALEEYK-ETAQRHEFLETQRKDLLDSIENTQNTIKEIDQITKVKFDE---AFAAIN 1162
Query: 1118 LKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLAL 1177
+ ++ + GG ++L D L+ G+ PP K +N+ LSGGEKTL++ +L
Sbjct: 1163 ENFGKAFKKLFGGGQGFMKLTDELNSSDSGIDVIASPPGKKLQNVLLLSGGEKTLTAFSL 1222
Query: 1178 VFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLV 1237
+ + Y P+P ++DE+DA LD NV+ VK+ + QFI+I+ A +
Sbjct: 1223 LVGIFQYAPSPFCILDEVDAPLDETNVARFNELVKEMSMQTQFILITHSKRTMATAPVMY 1282
Query: 1238 GI 1239
G+
Sbjct: 1283 GV 1284
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 29 NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKR-AKQMRLNKVSELIHNS 87
FKS+ + +A+VGPNG GKSN+ DA+ +V G++ AK +R + ++I
Sbjct: 11 GFKSFCDRTELKFPGDGIAAIVGPNGCGKSNIADAISWVLGEQSAKSLRGIHMQDVIFAG 70
Query: 88 T 88
T
Sbjct: 71 T 71
>sp|P41508|SMC_MYCHR Chromosome partition protein Smc OS=Mycoplasma hyorhinis GN=smc PE=1
SV=2
Length = 979
Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 128/239 (53%), Gaps = 7/239 (2%)
Query: 1015 LEQIQKDLVDPEKLQATLADQTLSDACDLKRTLEMVALLEAQLKEL-NPNLDSITEYRRK 1073
+EQ QK L + KL A + S D+++ V L+ +LKEL N NL++ITE+
Sbjct: 727 VEQNQKRLSEHYKLTLEAASEQYSLDLDIEQARHFVDSLKKELKELGNVNLEAITEFEEV 786
Query: 1074 VAAYNER---VEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLG 1130
Y E+ +E+LTT + ++ D+ + E + N ++ + ++Q + G
Sbjct: 787 NQRYQEKKQYIEELTTAKSKIEEAISDLDKIIINKTTEIV---NLVNNEFNMVFQKMFGG 843
Query: 1131 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 1190
G AE+ D D + GV S +PP K+ KN+ SGGEK + +++L+FA+ +P PL
Sbjct: 844 GKAEIHFTDKNDILNSGVEISAQPPGKTIKNLRLFSGGEKAIIAISLLFAILKARPIPLC 903
Query: 1191 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSI 1249
++DE++AALD NV ++K ++ QF+II+ R+ D+L+G+ SI
Sbjct: 904 ILDEVEAALDESNVIRYVEFLKLLKENTQFLIITHRSGTMSRVDQLLGVTMQKRGVTSI 962
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 170/355 (47%), Gaps = 35/355 (9%)
Query: 575 EGIYGRMGDLGAIDAKYDIAVSTAC-PGLDYIVVETTSAAQACVELLRREKLGVATFMIL 633
+G G +L +++++ +A+ T L+ IV++T+ ++ L++ G ATF+ L
Sbjct: 419 DGYIGLASELFKVESEFSLAIETVLGAALNQIVMKTSEDVLQAIDFLKKNLSGKATFIPL 478
Query: 634 ----EKQVD----LFPKMKEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLD 685
E++V L K ++ F V + +LI+ + KL F +GN LV ++D
Sbjct: 479 TSIKEREVREDHLLVLKGQKGFL---GVAK--ELIEFDTQFNKL-FGFLLGNILVVDNVD 532
Query: 686 QATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAE 745
A RIA + ++ +V+L+G LF GT++GG R TSI + + N
Sbjct: 533 NANRIAKILDHKYT-IVSLEGDLFRPGGTITGGSKLER-----TSILNYDIKIKEHTNTL 586
Query: 746 KELSAMVDNLSRIRQKIADAVKHYQASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQLD 805
K + +L +Q I + ++ ++ + V + E S+ S+ + L ++L+
Sbjct: 587 KFAEDQIHDLKIKQQTIYNEIETVNSTIQQV----------KIEANSINSKLNILNEELN 636
Query: 806 SLKA-ASEPRKDEIDRLEELQKIISAEEKEIEK-IVNGSKDLKEKALQLQSKVENAGGEK 863
+LK ASE K++ + E L +E+ IEK I + +L K +L + + G +
Sbjct: 637 NLKLNASEIFKEQQEDQESLNLSFDSEKLNIEKQISTLTIELNSKKDRLTNLISEQGKGE 696
Query: 864 LKAQKL--KVDKIQSDIDKSSTEINRHKVQIETAQKMIKKLTKGIAESKKEKEQL 916
K Q+L K+ K+ + S TE NR K +E QK + + K E+ E+ L
Sbjct: 697 TKKQELDAKLRKLNTQHSDSITEQNRAKFLVEQNQKRLSEHYKLTLEAASEQYSL 751
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 18/178 (10%)
Query: 27 MRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKR-AKQMR-LNKVSELI 84
+ FKS+A + F S +VGPNGSGKSN+ DA+ +V G++ AKQ+R LN +
Sbjct: 9 IEGFKSFADPISIN-FDGSVVGIVGPNGSGKSNINDAIRWVLGEQSAKQLRGLNMDDVIF 67
Query: 85 HNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFR-DNSSKYYINDRPSN 143
S + + A V + F+ +D E Q F ISR+ R +++Y+ ND+P
Sbjct: 68 AGSKTVKPQEKAMVKLTFKN----EDAIEETKQ--IFTISRLLKRGQGTNEYFYNDQPVR 121
Query: 144 FTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIGTDRY 201
+ ++ G+ ++ +I QG + +I+ P+ + +E+ GT +Y
Sbjct: 122 YKDIKNLAVESGIS-KSSLAIISQGTISEIAEATPEQRKA-------VIEEAAGTSKY 171
>sp|Q920F6|SMC1B_MOUSE Structural maintenance of chromosomes protein 1B OS=Mus musculus
GN=Smc1b PE=1 SV=1
Length = 1248
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 89/155 (57%), Gaps = 12/155 (7%)
Query: 25 MVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELI 84
+++ NFKS+ G Q +GPF K F+ ++GPNGSGKSNV+DA+ FV G++ +R+ + ELI
Sbjct: 7 LLVENFKSWRGRQVIGPF-KRFTCIIGPNGSGKSNVMDALSFVMGEKTTNLRVKNIQELI 65
Query: 85 HNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYINDRPSNF 144
H + + + S+ I+ ++D G + +R+ R S+Y+ D+P +
Sbjct: 66 HGAHTGKPVSSSASVT----IIYIEDS------GEEKTFTRI-IRGGCSEYHFGDKPVSR 114
Query: 145 TEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK 179
+ +L+ G+ + L+ QG VE IS+ KPK
Sbjct: 115 SVYVAQLENIGIIVKAQNCLVFQGTVESISMKKPK 149
>sp|B9E1H0|SMC_CLOK1 Chromosome partition protein Smc OS=Clostridium kluyveri (strain NBRC
12016) GN=smc PE=3 SV=1
Length = 1185
Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Query: 1063 NLDSITEYR---RKVAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLK 1119
NL +I EY+ +K+ + + EDL Q+ +KK D +K F F +
Sbjct: 995 NLGAIEEYKNLQKKITFLSSQKEDLIKSKQE---LKKVIDAMTEKMKGVFKENFVKLKKN 1051
Query: 1120 LKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVF 1179
+ ++ + GG A+L L D + + +V+PP K +NI +SGGEK LS++AL+F
Sbjct: 1052 FNDTFRELFKGGSADLVLTKG-DELTGNIDITVQPPGKKLQNINLMSGGEKGLSAIALLF 1110
Query: 1180 ALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 1239
A+ KPTP ++DEI+A+LD NV +++ ++D QFI+I+ R E++D L G+
Sbjct: 1111 AMLKIKPTPFCILDEIEASLDDANVLRYAEFLRKFSRDTQFIVITHRKGTMEVSDVLYGV 1170
>sp|Q5H054|SMC_XANOR Chromosome partition protein Smc OS=Xanthomonas oryzae pv. oryzae
(strain KACC10331 / KXO85) GN=smc PE=3 SV=2
Length = 1167
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 239/522 (45%), Gaps = 84/522 (16%)
Query: 745 EKELSAMVDNLSRIRQKIADAVKHYQASEKAVAHLEMELAK-------SRKEIESLKSQH 797
E +L++ + L Q+ DA + + ++V+ L +L +R IE +++
Sbjct: 678 EHQLASFREQLLAAEQQREDAQRQLYMAHRSVSELAGQLQSQQGKVDAARTRIERIETDL 737
Query: 798 SYLEKQLD-SLKAASEPR---KDEIDRLEELQKIISAEEKEIEKIVNGSKDLKEKALQLQ 853
S L + LD S + A E R +D + + +LQ A E E ++ + ++ A ++
Sbjct: 738 SQLLETLDTSREQAREARAKLEDAVTLMGDLQGTREALESERRQLTDARDQARDAARGVR 797
Query: 854 SKVENAGGEKLKAQKLKVDKIQSDIDKSSTEINRHKVQIETA-QKMIKKLTKG---IAES 909
+ +A L++Q+ ++ + +++ ++ + Q++T + ++ +L++G +
Sbjct: 798 DAM-HALALTLESQRTQIASLSQTLER----MDSQRGQLDTRLEDLVAQLSEGDSPVETL 852
Query: 910 KKEKEQLVEERVKMERIFDE---ILEKAHNVQEHYTNTQKLIDQH----RDVLDKAKNDY 962
+ E + + ERV+ ER E +L+ + + T++ D+ R+ + + K D
Sbjct: 853 EHEHQAALSERVRTERALGEARTLLDSIDSELRSFEQTRQQRDEQALAQRERISQRKLDQ 912
Query: 963 EKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQKDL 1022
+ L + ++L A+ ++A + L+D+ E
Sbjct: 913 QALVLSAEQLSAAVVKAGFVLEDVVNGLPES----------------------------- 943
Query: 1023 VDPEKLQATLADQTLSDACDLKRTLEMVALLEAQLKELNP-NLDSITEYRRKVAAYNERV 1081
+P + +AT V ++ +++ L P NL +I EY + A +E +
Sbjct: 944 ANPAEWEAT------------------VGQIDGRMRRLEPVNLAAIQEYG-EAAQRSEYL 984
Query: 1082 E----DLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELEL 1137
+ DL T + ++ ++ D + R F F+ ++ ++ +Y + GG A LEL
Sbjct: 985 DAQNLDLNTALETLEEAIRKIDRETRGR---FKDTFDRVNSGVQALYPRLFGGGHAYLEL 1041
Query: 1138 VDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDA 1197
D GV RPP K +I+ LSGGEK ++++ALVFA+ P P ++DE+DA
Sbjct: 1042 TGE-DLLDTGVTIMARPPGKRVSSISLLSGGEKAMTAVALVFAIFQLNPAPFCLLDEVDA 1100
Query: 1198 ALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 1239
LD NV + + V++ ++ QF+ +S E A +L G+
Sbjct: 1101 PLDEANVGRLANMVREMSEKVQFLFVSHNKATMEAARQLSGV 1142
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 21/188 (11%)
Query: 27 MRNFKSYAGEQRVGP----FHKSFSAVVGPNGSGKSNVIDAMLFVFGK-RAKQMRLNKVS 81
+ FKS+ V P + + +VGPNG GKSN+IDA+ +V G+ A ++R + ++
Sbjct: 8 LSGFKSF-----VDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSLT 62
Query: 82 ELI-HNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYINDR 140
++I S+ + + A V + F G + + ++ + R+ RD +S YY+N
Sbjct: 63 DVIFSGSSARKPVSQATVELIFDNSDHTISGEFASF--NEISVKRLVSRDGNSAYYLNGT 120
Query: 141 PSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIGTDR 200
++T G G+ + +I QG + QI +P E YLE+ G +
Sbjct: 121 KCRRRDITDLFLGTGLG-PRSYSIIEQGMISQIIEARP-------EDLRVYLEEAAGISK 172
Query: 201 YVEKIDES 208
Y E+ E+
Sbjct: 173 YKERRKET 180
>sp|Q6N1B7|SMC_RHOPA Chromosome partition protein Smc OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=smc PE=3 SV=2
Length = 1154
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 108/200 (54%), Gaps = 17/200 (8%)
Query: 1057 LKELNPNLDSITEYRRKVAAYNERVED--------LTTVTQQRDDVKKQYDEWR------ 1102
L E+ +LD + R ++ A N R E+ T+ +RDD+ + + R
Sbjct: 928 LAEIEESLDKLRRDRERLGAVNLRAEEELNEVETQHGTLAAERDDLVEAIKKLRTGIQSL 987
Query: 1103 -KKRLDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKN 1161
K+ + +A F+ ++ K ++ + GG+AEL+L++S DP G+ +PP K ++
Sbjct: 988 NKEARERLLASFDVVNGHFKRLFTTLFGGGEAELKLIESDDPLEAGLDIIAKPPGKKPQS 1047
Query: 1162 IANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFI 1221
++ LSGGE+ L+++AL+FA+ P+P+ V+DE+DA LD NV + D K +
Sbjct: 1048 LSLLSGGEQALTAMALIFAVFLTNPSPICVLDEVDAPLDDHNVERFCDLLTDMAKTTETR 1107
Query: 1222 IISLRNNMFELA--DRLVGI 1239
I++ +N +A +RL G+
Sbjct: 1108 FITITHNPITMARMNRLFGV 1127
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 148/368 (40%), Gaps = 51/368 (13%)
Query: 27 MRNFKSYAGEQRVGP----FHKSFSAVVGPNGSGKSNVIDAMLFVFGKRA-KQMRLNKVS 81
+ FKS+ V P + VVGPNG GKSN+++A+ + G+ + K +R +
Sbjct: 8 LHGFKSF-----VEPTDFMIEPGLTGVVGPNGCGKSNLVEALRWAMGETSHKSLRATDMD 62
Query: 82 ELIHNSTNYQNLDSAGVSVHFQEIVDLDDG---TYEAIQGSDFV-ISRVAFRDNSSKYYI 137
+I + + + H + ++ +D+ A+ +D + ISR R+ S Y I
Sbjct: 63 AVIFAGSGNRPARN-----HAEVVMSIDNSDRTAPAALNDADTLDISRRIEREAGSVYRI 117
Query: 138 NDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIG 197
N R +V + L + L+ QG++ +I KP E LED G
Sbjct: 118 NGREVRARDV-QLLFADAATGARSPALVHQGKIGEIIQAKP-------EQRRRVLEDAAG 169
Query: 198 -TDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIAWRFVCVSVLDVK 256
+ + + + +L + + + L Q ++ I +R V V K
Sbjct: 170 VAGLHARRHEAELRLKAAETNLTRVEDVIGQLSTQVDGLKKQARQAIRFREVAAKVR--K 227
Query: 257 NEAEAYMLKELSLLKWQEKATNL--AYEDTSLKIVELQENVSKLEENLKNEREKIQ-DNN 313
EA Y L+W++ + A E L + +L E ++ E +IQ D
Sbjct: 228 TEAMLYH------LRWRDAQAEVGAAAEVHDLGVRQLAECT-----RVQAEASRIQADRA 276
Query: 314 KTLKELESVH-------NKYMRRQEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKIK 366
TL L + + +E+LD + +KE E ER+ ++ D +Q+
Sbjct: 277 STLPSLREAEARAAAGLQRLINAREQLDREEARAKERVVELERRLTQFSSDVAREQQQAI 336
Query: 367 KLEVKVEK 374
+ +E+
Sbjct: 337 DADAALER 344
>sp|Q8CG48|SMC2_MOUSE Structural maintenance of chromosomes protein 2 OS=Mus musculus
GN=Smc2 PE=1 SV=2
Length = 1191
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 141/617 (22%), Positives = 273/617 (44%), Gaps = 74/617 (11%)
Query: 642 KMKEHFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRV 701
++ ++ P+NV L+ K E K G T V ++D A ++A+ + R
Sbjct: 592 RVAQNLVGPDNVHVALSLVDYKPELQK-GMEFVFGTTFVCNNMDNAKKVAFD-KRIMTRT 649
Query: 702 VTLDGALFEKSGTMSGGGSKPRGGKMGTSIRPTSVSAEAIINAEKELSAMVDNLSRIRQK 761
VTL G +F+ GT+SGG ++ + + T + + + E EL A+ + L+ ++
Sbjct: 650 VTLGGDVFDPHGTLSGG-ARSQAASILTKFQEVKDVQDELRTKENELRALEEELAGLKN- 707
Query: 762 IADAVKHYQASEKAVAHLEMELAKSRKEIESLKSQHSYLEKQ---LDSLKAASEPRKDEI 818
+A+ + + + E+ ++ K Q S KQ LD+LK E ++ +
Sbjct: 708 VAEKYRQLKQ--------QWEMKTEEGDLLQTKLQQSSYHKQQEELDALKKTIEESEETL 759
Query: 819 DRLEELQKIISAEEKEIEKIVNGSKDLKEKALQLQSKVENAGGEK---LKAQKLKVDKIQ 875
+E+QK +EK L++K++NA E+ LK + K+D +
Sbjct: 760 KSTKEIQK-----------------KAEEKYEALENKMKNAEAEREKELKDAQKKLDCAK 802
Query: 876 SDIDKSSTEINRHKVQIETAQKMIKKLTKGIAESKKEKEQLVEERVKMERIFDEILEKAH 935
+ D SS ++ + ++E E E+L E E+ D + E
Sbjct: 803 TKADASSKKMKEKQQEVEAITL--------------ELEELKREHASNEQQLDAVNEAIK 848
Query: 936 NVQEHYTNTQKLIDQHRDVLDKAKNDYEKLKKTV---DEL---RASEIEADYKLQDLKRS 989
+ + ++++ ++KA+++ K K+ + D + + +E+ A + LQ+ +
Sbjct: 849 AYEGQIEKMAAEVAKNKESVNKAQDELMKQKQIITAQDNIIKDKCAEV-AKHNLQNNESQ 907
Query: 990 YK--ELEMRGKGYKKRLDDLQITLLKHLEQIQKDLVDPEKLQATLADQTLSDACDLKRTL 1047
K EL+ +K+ DD + K L D ++ EK L Q S A D K
Sbjct: 908 LKIKELDHSISKHKREADDAAAKVSKMLSDY--DWINAEK---HLFGQPNS-AYDFKTNN 961
Query: 1048 EMVALLEAQ-LKEL------NPNLDSITEYRRKVAAYNERVEDLTTVTQQRDDVKKQYDE 1100
A Q L+E+ N NL ++ YN+ ++ V + + ++
Sbjct: 962 PKEAGQRLQKLQEVKEKLGRNVNLRAMNVLTEAEERYNDLMKKKRIVENDKSKILATIED 1021
Query: 1101 WRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWK 1160
+K+ + ++ ++ + G +A L + +G+ F V +WK
Sbjct: 1022 LDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPPEG-QTVLDGLEFKV-ALGNTWK 1079
Query: 1161 -NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 1219
N+ LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD + +G ++ +Q
Sbjct: 1080 ENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQ 1139
Query: 1220 FIIISLRNNMFELADRL 1236
FI++SL+ MF A+ L
Sbjct: 1140 FIVVSLKEGMFNNANVL 1156
>sp|Q9CBT5|SMC_MYCLE Chromosome partition protein Smc OS=Mycobacterium leprae (strain
TN) GN=smc PE=3 SV=1
Length = 1203
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 167/736 (22%), Positives = 300/736 (40%), Gaps = 119/736 (16%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKR-AKQMRLN 78
+++K + ++ FKS+A + F +AVVGPNGSGKSNV+DA+ +V G++ AK +R +
Sbjct: 1 MYLKSLTLKGFKSFASPTTL-RFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGS 59
Query: 79 KVSELIHNST-NYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYI 137
K+ ++I T + L A V++ I+D D I+ S+ I+R FRD +S+Y I
Sbjct: 60 KMEDVIFAGTLSRAPLGRAEVTL----IIDNSDNVLP-IEYSEVSITRRMFRDGASEYEI 114
Query: 138 NDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIG 197
N +V + L G+ + + ++ QG+++QI +P E ++E+ G
Sbjct: 115 NGSSCRLMDVQELLSDSGIGREMH-VIVGQGKLDQILQSRP-------EDRRTFIEEAAG 166
Query: 198 TDRYVEKIDESYKDYVVLFDLIGLNHSMRNVPVLFKWLNWQRKKEIAWRFVCVSVLDVKN 257
L ++R+KE A R LD +
Sbjct: 167 I------------------------------------LKYRRRKEKALRK-----LDAMS 185
Query: 258 EAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNEREKI-------- 309
A + + L+ Q K + + E+ + ++ +L++ R ++
Sbjct: 186 ANLARLTDLTTELRRQLKPLS--------RQAEVARRAATIQADLRDARLRLAADDLVSR 237
Query: 310 QDNNKTLKELESVHNKYMRR-QEELDNDLRVSKEEFKEFERQDVKYREDSKHMKQKIKKL 368
Q + E E++ MRR +E L V+ EE E + ++ ++Q L
Sbjct: 238 QGQRDAIVEAETM----MRRDHDEAAARLAVASEELAAHEAALTELSGRAESVQQIWFGL 293
Query: 369 EVKVEKDSSKIDDLTKECEHATNQIPKLEENIPKLLKL-FENVFIADTQNIITFPFMNMI 427
VE+ S+ I + H + P +L+ + + +A+ Q
Sbjct: 294 STLVERVSATIRIAGERAYHLDVDPATPSDTDPDVLEAEAQQMEVAEQQ----------- 342
Query: 428 NLCVETERYRSELATVRAELEPWEKELI-VHKGKLEVTCTES------KLLCEKHEAGRK 480
L E R++L RAEL E+ + K LE E+ LL + E R
Sbjct: 343 -LLAELAVARTQLEAARAELADRERHAVEADKAHLEAVRAEADRREGLALLAGQVETMRA 401
Query: 481 AFEDAQRQMDDILRRIDTKTTAIRNMQGDLEKNKLEAMEAHNVEQECFKEQETLIPLEQA 540
E + + RI+ T + + + E + E E ++ E + +
Sbjct: 402 RIESIDDSVARLSERIEEVTARTQQILAEFETVQGRVGELDQSEVHLDEQHERAVAALRF 461
Query: 541 ARQKVAELKSVMDSEKSQGSVLKAILQA--------------KESNQIEGIYGRMGDLGA 586
A ++VAEL+S + Q L+A + A + G+ G + L
Sbjct: 462 ANERVAELQSAERDAERQVVSLRARIDALTMGLERKDGAAWLARNYSDTGLLGSIAKLVK 521
Query: 587 IDAKYDIAVSTAC-PGLDYIVVETTSAAQACVELLRREKLGVATFMILEKQVDLFPKMKE 645
+ Y+ A++ P D + V++ AA++ + L+ G AT ++ + D P
Sbjct: 522 VRPGYEAALAAVLGPAADALAVDSLGAARSALTALKEADAGRATLVLADWLADAGPACVT 581
Query: 646 HFSTPENVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLD 705
P+ R DLI+ ++ A A + +V L +A + + RVVT+D
Sbjct: 582 GL--PDGAQRALDLIEAPPW-LQGALIAMLYGVVVVNYLAEALGVVDICPQ--LRVVTVD 636
Query: 706 GALFEKSGTMSGGGSK 721
G L +G +SGG +
Sbjct: 637 GDLV-GAGWVSGGSGR 651
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 1055 AQLKELNPNLDSITEYRRKVAAYNERVEDLTT----VTQQRDDVKKQYDEWRKKRLDEFM 1110
A+L +NP ++ E+ AA ER L+T V R D+ E + L F
Sbjct: 993 AELGRVNPL--ALEEF----AALEERYNFLSTQLEDVKGARKDLLDVVAEVDARILQVFS 1046
Query: 1111 AGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEK 1170
F + + + ++ + GG+ L L D D + G+ RP K ++ LSGGEK
Sbjct: 1047 DAFVDVEREFRGVFTSLFPGGEGRLRLTDPDDMLTTGIEVEARPSGKKVSRLSLLSGGEK 1106
Query: 1171 TLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVS-IVGHYVKDRTKDAQFIIISLRNNM 1229
+L ++A++ A+ +P+P Y+MDE++AALD N+ ++G + + R + +Q III+ +
Sbjct: 1107 SLIAVAMLVAIFKARPSPFYIMDEVEAALDDVNLCRLIGVFEQLRGQ-SQLIIITHQKPT 1165
Query: 1230 FELADRLVGI-YKTDNCTKSIT 1250
E+AD L G+ + D T I+
Sbjct: 1166 MEVADTLYGVTMQGDGITAVIS 1187
>sp|Q81ZL2|SMC_COXBU Chromosome partition protein Smc OS=Coxiella burnetii (strain RSA 493
/ Nine Mile phase I) GN=smc PE=3 SV=1
Length = 1169
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 126/241 (52%), Gaps = 20/241 (8%)
Query: 1029 QATLADQTLSDACDLKRTLEMVALLEAQLKELNPNLDSITEYRRKVAAYN-ERVEDLTTV 1087
Q T+ +Q + DL++ + + EA ++ LD + E +++ N +E+ +V
Sbjct: 922 QTTIKEQLSENDFDLEQVMAELPE-EATIESWQEKLDQLVERIQRMGPINLAAIEEYESV 980
Query: 1088 TQQRDDVKKQYDEW---------------RKKRLDEFMAGFNAISLKLKEMYQMITLGGD 1132
++++ + KQ+ + R+ R +F ++ ++ + + ++ I GG
Sbjct: 981 NERKNYLDKQHADLTEALEILKNAIHKIDRETRA-KFQETYDQVNQQFQSLFPRIFGGGR 1039
Query: 1133 AELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVM 1192
A LE+ D+ D + GV+ +PP K I LSGGEK L+++ALVF+L P P ++
Sbjct: 1040 ATLEMTDT-DLLTAGVIVRAQPPGKRNVTIHMLSGGEKALTAVALVFSLFQLNPAPFCIL 1098
Query: 1193 DEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI-YKTDNCTKSITI 1251
DE+DA LD NV VK+ +K+ QF++IS E+AD L+G+ + ++ +++
Sbjct: 1099 DEVDAPLDDINVGRFCQLVKEMSKEVQFLVISHNKVTIEMADYLMGVTMQEPGVSRIVSV 1158
Query: 1252 N 1252
N
Sbjct: 1159 N 1159
>sp|Q552D9|SMC3_DICDI Structural maintenance of chromosome protein 3 OS=Dictyostelium
discoideum GN=smc3 PE=3 SV=1
Length = 1437
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 165/727 (22%), Positives = 328/727 (45%), Gaps = 94/727 (12%)
Query: 20 LFIKEMVMRNFKSYAGEQRVG-PFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLN 78
+FIK + ++ F+SY + H F+ V G NG+GKSN+ A+ F+ G + +
Sbjct: 1 MFIKFIFIKGFRSYKDQGFTSITLHPGFNVVTGRNGAGKSNLFAAIRFLLG----DLNVG 56
Query: 79 KVSE----LIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSK 134
SE L+H S + + V + F D D + I ++F + R F + +
Sbjct: 57 NNSEDRLKLLH-SYGGNTMQTGYVEIVF----DNSDHRF-PIDKTEFSLRRT-FGTSKDE 109
Query: 135 YYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLED 194
+ I + + +V + G N +++ QG++ ++LMK D L+ L++
Sbjct: 110 FSIGNNKLSKADVRNMFEAAGFSSSNPYYIVQQGKINTLALMK-------DSDRLDMLKE 162
Query: 195 IIGTDRYVEKIDESYKDYVVLFDL----IGLNHSMRNVPVLFKWLNWQRKKEIAWRFVCV 250
+ G Y E+ ES ++ + I + ++ + K L+ +RK+ ++
Sbjct: 163 VAGATVYEERKRESV---AIMIESESKSIKIEEFLKYIDERIKVLDKERKELQLYQ---- 215
Query: 251 SVLDVKNEAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSKLEENLKNEREKIQ 310
+ +++K + EAY++ +L +++ +I++L++ K + E +K++
Sbjct: 216 TQIEMKKQFEAYII-------------HLEANESNDRILDLEKEKEKYLIHSSKESKKLE 262
Query: 311 DNNKTLKELESVHNKYMRRQEELDNDLRVSKEEFKE-FERQDVKYREDSKHMKQKIKKLE 369
LK+ ES NK + +++DN+ ++ E+ E F++Q + KH K+ + K +
Sbjct: 263 RFTDELKKDESKFNKLLSEIKKIDNE-KIMVEKLNEVFDKQKAQLVIQQKHFKKLLSKEQ 321
Query: 370 VKVEKDSSKIDDLTKECEHATNQI----PKLEENIPKLLKLFENVFIADTQNIITFPFMN 425
K+EK + D L+ E +I PKLEE I + D N ++ N
Sbjct: 322 AKLEKLQKEQDLLSGSKEKLEKEIEIIKPKLEELIGQE---------DDIDNKLSSTERN 372
Query: 426 MINLCVETERYRSELATVRAELEPWEKELIVHKGKLEVTCT----ESKLLCEKHEAGRKA 481
+ L V+ ++ + T R +K L KLE +++ L E E ++
Sbjct: 373 LQELYVKQGMFQFKSKTER------DKYLGDESSKLEDIVNQYEQQAQSLEEDVEDMKQI 426
Query: 482 FEDAQRQMDDILRRID-----TKTTAIRNMQGDLEKNKLEAMEAHNVEQECFKEQETLIP 536
+ +Q D+ + D KT +R + LEK+++E + Q + + L
Sbjct: 427 QQSKGKQFDNSMASKDKEAEIVKTAELRVHELKLEKDQIE-QRVSSTFQSINEMKSNLTE 485
Query: 537 LEQAARQKVAELKSVMDSEKSQGSVLKAILQAKESNQIEGIYGRMGDL-GAIDAKYDIAV 595
++ L+++M+ S+G L + Q ++ +I+GI+G + +L ++ + +A+
Sbjct: 486 HRNEWKKAERNLQTIMNRPLSEG--LTRLNQIRQEGKIKGIHGPLVELFDIVEPEATLAL 543
Query: 596 S-TACPGLDYIVVETTSAAQACVELLRREKLGVATFMILEK---QVDLFPKMKEHFSTPE 651
GL ++VV+T A +E+L E +G +F+ L + + FP ++ P
Sbjct: 544 EVVGGNGLFHVVVDTDDTASKILEILNTENIGRLSFIPLNRVRTKPPKFPILENDLVCP- 602
Query: 652 NVPRLFDLIKVKDERMKLAFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEK 711
+ ++ + E MKL F G TL+ KD A ++ S + + +T +G +F
Sbjct: 603 -LIKVISFDPIYTEAMKLVF----GKTLICKDEATAEQVRKSSHVD---CITFEGDVFHS 654
Query: 712 SGTMSGG 718
G ++GG
Sbjct: 655 KGAVTGG 661
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 1165 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 1224
LSGG+KTL +LAL+FAL P P Y++DEIDAALD V ++ +++ QFI +
Sbjct: 1098 LSGGQKTLVALALIFALQRTDPAPFYLLDEIDAALDHNYRVAVSKMIRKHSREIQFIATT 1157
Query: 1225 L 1225
Sbjct: 1158 F 1158
>sp|E1X022|SMC_BACMS Chromosome partition protein Smc OS=Bacteriovorax marinus (strain
ATCC BAA-682 / DSM 15412 / SJ) GN=smc PE=3 SV=2
Length = 1226
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 102/178 (57%), Gaps = 2/178 (1%)
Query: 1063 NLDSITEYRRKVAAYN-ERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLK 1121
N +I +Y R+ ++ RV+++ + Q +D++ + +K + F F + ++ +
Sbjct: 1034 NWQAIEDYDRQKLRFDFLRVQEVE-LKQSLEDLETAINHIDEKSKERFKIAFEEVDVRFR 1092
Query: 1122 EMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFAL 1181
+++ +I GG+A L++ ++ GV +PP K +NI +SGGEK +++++L+F++
Sbjct: 1093 KVFPIIFGGGEAMLKVTGDINDSECGVDIIAKPPGKKMQNINLMSGGEKAMTAVSLIFSI 1152
Query: 1182 HHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 1239
KP+P ++DE+DA LD NV +++ + D+QFI+I+ EL D L G+
Sbjct: 1153 FLVKPSPFCLLDEVDAPLDDANVGRFNELLREMSSDSQFILITHNKKTMELNDTLYGV 1210
>sp|P75361|SMC_MYCPN Chromosome partition protein Smc OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=smc PE=3 SV=1
Length = 982
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 194/452 (42%), Gaps = 73/452 (16%)
Query: 821 LEELQKIISAEEKEIEKIVNGSKDLKEKALQLQSKVENAGGEKLKAQKLKVDKIQSDIDK 880
L LQ+ +++ E I ++ + K L+ L++K+ N +KLK +++ ++K ++
Sbjct: 570 LYNLQEKLASSEANITQLEHNEKQLRTNLTSLETKL-NELNKKLKYEEILLEKFNERVNH 628
Query: 881 SSTEINRHKVQIETAQ--------------KMIKKLTKGIAESKKEKEQLVEERVKMERI 926
++ I +K++ E ++++ L + AE + QL K+ +
Sbjct: 629 TNKAILSYKIEYEQLTNESFDGTPHSFDETRLVESLNRAWAERDELNSQL-----KLNQE 683
Query: 927 FDEILEKAHNVQEHYT-NTQKLIDQHRDVLDKAKNDYEKLKKTVDELRASEIEADYKLQD 985
E L K+ + E T + + L+D+ R L A+ + + T+ + +I YKL
Sbjct: 684 LKETLAKSIKLAEAKTADLRALLDEQRSQLVLAREGKIRFENTIHNI-TDKINGGYKLT- 741
Query: 986 LKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQKDLVDPEKLQATLADQTLSDACDLKR 1045
+E Y K P KL A
Sbjct: 742 -------MEFAIANYNK----------------------PIKLSTMQAQNK--------- 763
Query: 1046 TLEMVALLEAQLKELNP-NLDSITEYRRKVAAY---NERVEDLTTVTQQRDDVKKQYDEW 1101
+A +++QL E+ P NL+SI E K + N E L T + + DE
Sbjct: 764 ----IARMQSQLDEMGPINLESIAEIADKQKRFDDINGEYESLQTAIKDLQTAIGEIDEL 819
Query: 1102 RKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKN 1161
K DE + NA +L + + + GG ++ D+ + G+ PP K+ N
Sbjct: 820 ACKEFDELIQKVNA---ELPKTFNYLFGGGSCQIRYTDTDNVLLSGIEVFANPPGKNVAN 876
Query: 1162 IANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFI 1221
+ LSGGEKTL +L+++F++ PL ++DE ++ALD NV + + + + + QF+
Sbjct: 877 LMLLSGGEKTLVALSVLFSILRVSAFPLVILDEAESALDPANVERFANIIGNSSNNTQFL 936
Query: 1222 IISLRNNMFELADRLVG-IYKTDNCTKSITIN 1252
II+ R D L+G +T TK+ ++
Sbjct: 937 IITHRQGTMMKCDMLLGAAMQTKGVTKTFAVS 968
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRA-KQMRLN 78
+F+K FKSYA E + F S + +VGPNGSGKSNV+DA+ +V G+R+ K +R
Sbjct: 2 VFLKRFRAYGFKSYADEITIN-FTHSMTGIVGPNGSGKSNVVDALKWVLGERSMKHLRSK 60
Query: 79 KVSELI-HNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYI 137
++I S + A V + F L I V+ R+ S+YYI
Sbjct: 61 SGDDMIFFGSKDKPASKLAEVELTFDNSQKLLHDPRPEIS----VMRRIYRGSGQSEYYI 116
Query: 138 NDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIG 197
N E++ G++ + +I QG V KP E + ED G
Sbjct: 117 NGELVTLKEISGIFADIGLE-KGSLGIISQGSVSWFVEAKP-------EERRKIFEDASG 168
Query: 198 TDRYVEKIDE 207
RY ++ +E
Sbjct: 169 IGRYTKRKEE 178
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 574 IEGIYGRMGDLGAIDAKYDIAVSTACP-GLDYIVVETTSAAQACVELLRREKLGVATFMI 632
+ G+ + + +Y+ A+ A + Y+VV AA ++ L ++G TF+
Sbjct: 415 LTGLLNTLNTFLKFEKQYEKALLKALGKSIGYLVVNNNLAALKAIDFLLTNQIGQVTFLP 474
Query: 633 LEKQVDLFPKMKEHFSTPENVPRLFDLIKVK------DERMKLAFYAAMGNTLVAKDLDQ 686
++ EH E + +L + V DE ++ A +G ++A DL
Sbjct: 475 IDDIAFDTKIAPEHM---EILQQLDGFLGVGSDHVSCDESLQPIVNALLGQVIIASDLQA 531
Query: 687 ATRIAYSGNKEFRRVVTLDGALFEKSGTMSGG 718
A +++ S + RVVTL+G G + GG
Sbjct: 532 ALKLS-SYTYKLYRVVTLNGETVYAGGIIQGG 562
>sp|Q73VM3|SMC_MYCPA Chromosome partition protein Smc OS=Mycobacterium paratuberculosis
(strain ATCC BAA-968 / K-10) GN=smc PE=3 SV=2
Length = 1196
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 1055 AQLKELNPNLDSITEYRRKVAAYNERVEDLTT----VTQQRDDVKKQYDEWRKKRLDEFM 1110
A+L +NP ++ E+ AA ER L+T V R D+ DE + L F
Sbjct: 988 AELGRVNPL--ALEEF----AALEERYNFLSTQLEDVKAARKDLLGVVDEVDARILQVFS 1041
Query: 1111 AGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEK 1170
+ + + +++ ++ GG+ L L D + + G+ RPP K ++ LSGGEK
Sbjct: 1042 EAYTDVEREFSDVFGVLFPGGEGRLRLTDPSNMLTTGIEVEARPPGKKITRLSLLSGGEK 1101
Query: 1171 TLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMF 1230
L+++A++ A+ +P+P Y+MDE++AALD N+ + + +Q III+ +
Sbjct: 1102 ALTAVAMLVAIFRARPSPFYIMDEVEAALDDTNLRRLISLFELLRARSQLIIITHQKPTM 1161
Query: 1231 ELADRLVGI-YKTDNCTKSIT 1250
E+AD L G+ + D T I+
Sbjct: 1162 EVADALYGVTMQGDGITAVIS 1182
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKR-AKQMRLN 78
+++K + ++ FKS+A + F +AVVGPNGSGKSNV+DA+ +V G++ AK +R
Sbjct: 1 MYLKSLTLKGFKSFASPTTL-RFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGG 59
Query: 79 KVSELIHNSTNYQN-LDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYI 137
K+ ++I T+ + L A V+V +D D I+ S+ I+R FRD +S+Y I
Sbjct: 60 KMEDVIFAGTSSRAPLGRAEVTV----TIDNSDNALP-IEYSEVSITRRMFRDGASEYEI 114
Query: 138 NDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK 179
N +V + L G+ + + ++ QG++++I +P+
Sbjct: 115 NGSSCRLMDVQELLSDSGIGREMH-VIVGQGKLDEILQSRPE 155
>sp|Q604U6|SMC_METCA Chromosome partition protein Smc OS=Methylococcus capsulatus (strain
ATCC 33009 / NCIMB 11132 / Bath) GN=smc PE=3 SV=2
Length = 1169
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 9/202 (4%)
Query: 1056 QLKELNP-NLDSITEYRRKVAA---YNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMA 1111
+++ L P NL ++ EY+ + A E+ DLT + ++ D + R E
Sbjct: 962 EIERLGPVNLTAMQEYQEQEARQRYLEEQDRDLTESLATLEQAIEKIDRECRARFKET-- 1019
Query: 1112 GFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKT 1171
F I+ + M+ + GG A LEL ++ + S GV +PP K +I LSGGEK
Sbjct: 1020 -FEKINAGFQRMFPKLFGGGKAALELTEN-NLLSAGVSVMAQPPGKRNSSIHLLSGGEKA 1077
Query: 1172 LSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFE 1231
L++ ALVFA+ P P ++DE+DA LD NV VK+ ++ QF+ I+ E
Sbjct: 1078 LTAAALVFAIFELNPAPFCLLDEVDAPLDDANVGRFSQLVKEMSEKVQFLFITHNKATME 1137
Query: 1232 LADRLVGI-YKTDNCTKSITIN 1252
+A L G+ + ++ +T++
Sbjct: 1138 IAQYLAGVTMREPGVSRIVTVD 1159
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 22 IKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGK-RAKQMRLNKV 80
++++ + FKS+ + P + VVGPNG GKSNVIDA+ +V G+ A+ +R +
Sbjct: 3 LEKLKIAGFKSFVDPTTL-PLPGNLVGVVGPNGCGKSNVIDAVRWVMGESSARHLRGETM 61
Query: 81 SELIHNSTNYQNLDS-AGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYIND 139
+++I N ++ + S A V + F G Y Q I R RD S Y++N
Sbjct: 62 ADVIFNGSSTRKPASQASVELVFDNSSGRAGGEYARYQ--QIAIRRQVARDGQSSYFLNG 119
Query: 140 RPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIGTD 199
++T G G+ + +I QG + ++ KP E E +E+ G
Sbjct: 120 TRCRRKDITDLFLGTGLGA-RSYAIIEQGTISRLIEAKP-------EEMREIIEEAAGIS 171
Query: 200 RYVEKIDES 208
+Y E+ E+
Sbjct: 172 KYKERRHET 180
>sp|Q90988|SMC2_CHICK Structural maintenance of chromosomes protein 2 OS=Gallus gallus
GN=SMC2 PE=2 SV=1
Length = 1189
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 137/590 (23%), Positives = 261/590 (44%), Gaps = 66/590 (11%)
Query: 670 AFYAAMGNTLVAKDLDQATRIAYSGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGT 729
A G TLV +D A ++ + + R+ VTL G +F+ GT+SGG S +
Sbjct: 619 AMEYVFGTTLVCSSMDNAKKVTFD-KRIMRKTVTLQGDIFDPQGTLSGGAS--------S 669
Query: 730 SIRPTSVSAEAIINAEKELSAMVDNLSRIRQKIAD---AVKHYQASEKAVAHLEMELAKS 786
+ P + + +AE EL L +++A+ + YQ HL+ +
Sbjct: 670 HVTPILSKLKTMRDAEDELKIKTSQLEATEKELANLKNMAEKYQ-------HLKQQWEMK 722
Query: 787 RKEIESLKS--QHSYLEKQLDSLKAASEPRKDEIDRLEELQKIISAEEKEIEKIVNGSKD 844
+E E L++ Q S KQ + L A L+K I+ E+ ++K +
Sbjct: 723 SEEAELLQTKIQQSAYHKQQEDLLA--------------LKKTIAECEETLKKTEESQRK 768
Query: 845 LKEKALQLQSKVENA---GGEKLKAQKLKVDKIQSDIDKSSTEINRHKVQIETAQKMIKK 901
+E+ L++K++NA G+++K + K++ + D SS ++ + ++E +++
Sbjct: 769 AEEEYKALENKMKNAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQ 828
Query: 902 LTKGIAESKKEKEQLVEERVKMERIFDEILEKAHNVQEHYTNTQKLIDQHRDVLDKAKND 961
L + A K++ E + ++ + +A +E N + + + ++++ D
Sbjct: 829 LKQEQASYKQQSEAAQQAIASLKEQVSALEAEAVKTRESLKNAENELSSEKGLMEERTKD 888
Query: 962 YEKLKKTVDELRASEIEADYKLQDLKRSYKELEMRGKGYKKRLDDLQITLLKHLEQIQKD 1021
+ +++ R E L+ S LE Y++ D TL K L++ +
Sbjct: 889 IKAKSAKIEKYREQNNE-------LQLSINALEHDINKYQQETADASSTLDKLLKEYK-- 939
Query: 1022 LVDPEKLQATLADQTLSDACD--------LKRTLEMVALLEAQLKELNPNLDSITEYRRK 1073
+ EK AD T + L++ L LE L NL S E R
Sbjct: 940 WIASEKELFGQADTTYDFEANNPKETGQKLQKLLTKKEKLEKSLNMRAMNLLSEAEER-- 997
Query: 1074 VAAYNERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDA 1133
YN+ ++ V + + +E +K+ + ++ ++ M+ G A
Sbjct: 998 ---YNDLMKKKRMVENDKIKILATIEELDRKKNKALHIAWEKVNKDFGSIFSMLLPGAKA 1054
Query: 1134 ELELVDSLDPFSEGVVFSVRPPKKSWK-NIANLSGGEKTLSSLALVFALHHYKPTPLYVM 1192
L + +G+ F V WK N+ LSGG+++L++L+L+ A+ +KP P+Y++
Sbjct: 1055 ML-VPSKKQNILDGLEFRV-GLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPIYIL 1112
Query: 1193 DEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKT 1242
DE+DAALD + +G + K +QF+++SL++ MF A+ L Y+T
Sbjct: 1113 DEVDAALDLSHTQNIGQMLHAHFKQSQFLVVSLKDGMFNNANVL---YRT 1159
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFG-KRAKQMRLN 78
++IK +V+ FKSYA + F F+A+ G NGSGKSN++D++ F+ G Q+R +
Sbjct: 1 MYIKSIVLEGFKSYAQRTEIRDFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 79 KVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYIN 138
+ +L++ + ++ A VS+ F D + + I+R +KY IN
Sbjct: 61 SLQDLVYKN-GQAGVNKATVSITFDN-SDKKNSPLGFENNDEITITRQVIVGGRNKYLIN 118
Query: 139 DRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIGT 198
++ V G++++N FLI+QG++ ++ MKP L +E+ GT
Sbjct: 119 GMNASNNRVQDLFGSVGLNVNNPHFLIMQGQITKVLNMKPT-------EILAMIEEAAGT 171
Query: 199 DRY 201
Y
Sbjct: 172 RMY 174
>sp|B8GZ28|SMC_CAUCN Chromosome partition protein Smc OS=Caulobacter crescentus (strain
NA1000 / CB15N) GN=smc PE=1 SV=1
Length = 1147
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Query: 1078 NERVEDLTTVTQQRDDVKKQYDEWRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELEL 1137
+ER + VT+ R +++ E R++ +A F+ I+ + ++Q + GG AEL+L
Sbjct: 964 SERADLSGAVTKLRAGIEELNAEGRER----LLAAFDVINANFQTLFQALFGGGQAELKL 1019
Query: 1138 VDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDA 1197
++S DP G+ PP K +++ +SGGE+ L++ AL+F + P P+ V+DE+DA
Sbjct: 1020 IESDDPLEAGLEIFACPPGKRMASMSLMSGGEQALTASALIFGVFLANPAPICVLDEVDA 1079
Query: 1198 ALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELA--DRLVGI 1239
LD NV + + + + Q I++ +N ++ DRL G+
Sbjct: 1080 PLDDANVDRYCNMLDEMRRRTQTRFIAITHNPVTMSRMDRLFGV 1123
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 22 IKEMVMRNFKSY--AGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKR-AKQMRLN 78
+ + + FKS+ E R+ P + +VGPNG GKSN+++A+ +V G AK MR
Sbjct: 3 FQRLRLSGFKSFVEPTEFRIEP---GLTGIVGPNGCGKSNLLEALRWVMGANSAKAMRAG 59
Query: 79 KVSELIHNSTNYQNL-DSAGVSVHFQEIVDLDDGTYEAIQGSDFV--ISRVAFRDNSSKY 135
+ ++I + + + A V++ +D D T A D + + R R S Y
Sbjct: 60 GMDDVIFAGSGARPARNHADVTL----TIDNADRTAPAQFNDDPILEVVRRIDRGEGSTY 115
Query: 136 YINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK 179
IN R +V + L N+ L+ QG++ ++ KP+
Sbjct: 116 RINGREVRARDV-QLLFADASTGANSPALVRQGQISELIGAKPQ 158
>sp|A3PMS2|SMC_RHOS1 Chromosome partition protein Smc OS=Rhodobacter sphaeroides (strain
ATCC 17029 / ATH 2.4.9) GN=smc PE=3 SV=2
Length = 1151
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 1107 DEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLS 1166
+ + F ++ ++ + GG+A L +V+S DP G+ +PP K ++ LS
Sbjct: 994 ERLLTAFEQVNASFGTLFTHLFGGGEARLVMVESDDPLEAGLEIMCQPPGKKLSTLSLLS 1053
Query: 1167 GGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTK--DAQFIIIS 1224
GGE+TL++LAL+FA+ P P+ V+DE+DA LD NV+ + + T+ + +F+II+
Sbjct: 1054 GGEQTLTALALIFAVFLANPAPICVLDEVDAPLDDANVTRFCDLLDEMTRRTETRFLIIT 1113
Query: 1225 LRNNMFELADRLVGI 1239
DRL G+
Sbjct: 1114 HHAVTMARMDRLFGV 1128
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 38/173 (21%)
Query: 27 MRNFKSYAGEQRVGP----FHKSFSAVVGPNGSGKSNVIDAMLFVFGK-RAKQMRLNKVS 81
+ FKS+ V P H+ + VVGPNG GKSN+++A+ +V G+ R MR +
Sbjct: 8 LNGFKSF-----VDPTDLVIHEGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGAGME 62
Query: 82 ELIHNSTNYQNLDSAGVSVHFQEI-VDLDDGTYEAIQG---SDFV-ISRVAFRDNSSKYY 136
++I + + +F E+ + LD+ A G +D + I R RD S Y
Sbjct: 63 DVIFAGAATRP------ARNFAEVALVLDNADRLAPAGFNDADTIEIVRRITRDAGSAYK 116
Query: 137 INDRPSNFTEVTKKLKGKGVDL--------DNNRFLILQGEVEQISLMKPKGQ 181
N TK ++ + + + ++ L+ QG++ ++ KPK +
Sbjct: 117 AN---------TKDVRARDIQMLFADASTGAHSPALVRQGQISELINAKPKAR 160
>sp|P50533|SMC2_XENLA Structural maintenance of chromosomes protein 2 OS=Xenopus laevis
GN=smc2 PE=1 SV=1
Length = 1203
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 183/418 (43%), Gaps = 74/418 (17%)
Query: 20 LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFG-KRAKQMRLN 78
+ +K +++ FKSYA + F F+A+ G NGSGKSN++D++ F+ G Q+R +
Sbjct: 1 MHVKSIIIDGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLTQVRAS 60
Query: 79 KVSELIHNSTNYQNLDSAGVSVHFQEIVDLDDGTYEAIQGSDFVISRVAFRDNSSKYYIN 138
+ +L++ + + A VS+ F D + ++R +KY IN
Sbjct: 61 NLQDLVYKN-GQAGITKATVSITFDN-YDKKQSPLGFEAHDEITVTRQVVIGGRNKYLIN 118
Query: 139 DRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKGQGPHDEGFLEYLEDIIGT 198
+N T V G++++N FLI+QG + ++ MKP P L +E+ GT
Sbjct: 119 GVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKP----PE---ILAMIEEAAGT 171
Query: 199 DRY----------VEKIDESYKDYVVLF--DLIGLNHSMRNVPVLFKWLNWQR------- 239
Y +EK + K+ + ++ H ++ +L +Q+
Sbjct: 172 RMYECKKIAAQKTIEKKEAKLKEIQTILEEEITPTIHKLKEERS--SYLEYQKIMREIEH 229
Query: 240 --KKEIAWRFVCVSVLDVKNEAEAYMLKELSLLKWQEKATNLAYEDTSLKIVELQENVSK 297
+ +A++FVC V++ E + E+Q+++ K
Sbjct: 230 LSRLYVAYQFVCAEETKVRSAEE---------------------------LKEMQDSILK 262
Query: 298 LEENLKNEREKIQDNNKTLKELESVHNKYMRRQEELDNDLRVSKEEFKEFERQDVKY--- 354
L++ + K+++ K + ELE + R +E+ LR +E E +R D K
Sbjct: 263 LQDTMAENERKVKELGKEIAELEKM------RDQEVGGALRSLEEALSEAQRADTKVQSA 316
Query: 355 ----REDSKHMKQKIKKLEVK-VEKDSSKIDDLTKECEHATNQIPKLEENIPKLLKLF 407
+++ K ++K +K VK +E+D+ + KE + T+ + L+E K ++ F
Sbjct: 317 LDLKKQNMKAEREKKRKELVKSMEEDAKVLTAKEKEVKKITDGLSSLQEASQKDVEAF 374
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 446,754,663
Number of Sequences: 539616
Number of extensions: 19562740
Number of successful extensions: 121357
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 4052
Number of HSP's that attempted gapping in prelim test: 87440
Number of HSP's gapped (non-prelim): 22568
length of query: 1263
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1134
effective length of database: 121,958,995
effective search space: 138301500330
effective search space used: 138301500330
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)