Query 000838
Match_columns 1262
No_of_seqs 541 out of 5481
Neff 8.4
Searched_HMMs 46136
Date Tue Apr 2 00:24:32 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000838.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000838hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 2E-189 4E-194 1722.5 83.8 1181 1-1262 143-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 1E-185 3E-190 1820.8 125.2 1243 1-1262 193-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 3E-165 8E-170 1637.4 123.3 1180 1-1261 89-1393(1394)
4 KOG0061 Transporter, ABC super 100.0 2.5E-89 5.5E-94 839.8 58.8 559 689-1262 22-612 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 2.3E-89 5E-94 852.8 58.9 544 716-1262 36-617 (617)
6 PLN03211 ABC transporter G-25; 100.0 6.8E-89 1.5E-93 845.5 61.8 559 689-1259 36-659 (659)
7 TIGR00956 3a01205 Pleiotropic 100.0 6.9E-88 1.5E-92 897.2 62.0 568 687-1259 24-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 8.9E-87 1.9E-91 880.9 58.4 570 687-1259 126-790 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 1.1E-84 2.4E-89 799.3 40.2 542 716-1261 126-733 (1391)
10 KOG0061 Transporter, ABC super 100.0 3E-73 6.4E-78 697.8 46.9 546 1-596 58-608 (613)
11 TIGR00955 3a01204 The Eye Pigm 100.0 1.2E-72 2.6E-77 702.7 52.6 552 1-596 53-613 (617)
12 PLN03211 ABC transporter G-25; 100.0 3.2E-72 7E-77 696.5 53.1 547 1-595 96-657 (659)
13 KOG0055 Multidrug/pheromone ex 100.0 7E-71 1.5E-75 680.3 33.9 760 1-915 381-1194(1228)
14 KOG0054 Multidrug resistance-a 100.0 3.9E-69 8.4E-74 682.1 40.9 763 1-930 549-1359(1381)
15 TIGR01257 rim_protein retinal- 100.0 3.1E-66 6.6E-71 683.4 61.8 203 691-915 1936-2140(2272)
16 PLN03130 ABC transporter C fam 100.0 1.4E-62 3.1E-67 660.9 40.6 198 691-916 1236-1443(1622)
17 COG1123 ATPase components of v 100.0 1.6E-61 3.4E-66 561.3 40.0 445 1-915 37-500 (539)
18 PLN03232 ABC transporter C fam 100.0 4.1E-61 8.8E-66 648.0 44.4 198 691-916 1233-1440(1495)
19 TIGR00957 MRP_assoc_pro multi 100.0 4.8E-61 1.1E-65 648.1 40.0 198 691-916 1283-1490(1522)
20 PTZ00265 multidrug resistance 100.0 3.2E-60 7E-65 632.2 42.6 203 691-916 1164-1429(1466)
21 PRK13549 xylose transporter AT 100.0 7.4E-60 1.6E-64 578.5 39.1 192 718-916 275-476 (506)
22 PRK10261 glutathione transport 100.0 2.4E-59 5.3E-64 584.0 42.1 212 692-915 313-534 (623)
23 PRK09700 D-allose transporter 100.0 9.8E-60 2.1E-64 578.6 37.9 189 720-916 278-480 (510)
24 PRK10762 D-ribose transporter 100.0 1.5E-59 3.2E-64 575.1 39.3 189 720-916 267-466 (501)
25 TIGR03269 met_CoM_red_A2 methy 100.0 6.1E-59 1.3E-63 572.9 42.2 187 718-916 297-499 (520)
26 TIGR01271 CFTR_protein cystic 100.0 3.6E-59 7.8E-64 627.8 41.5 197 691-916 1216-1422(1490)
27 PRK15134 microcin C ABC transp 100.0 6.7E-59 1.4E-63 573.2 39.4 189 718-916 299-497 (529)
28 PRK15439 autoinducer 2 ABC tra 100.0 6.7E-59 1.5E-63 569.4 38.9 189 720-916 278-474 (510)
29 TIGR02633 xylG D-xylose ABC tr 100.0 1.2E-58 2.7E-63 567.9 39.9 192 718-916 273-474 (500)
30 PTZ00243 ABC transporter; Prov 100.0 1.4E-58 3.1E-63 621.7 42.3 198 691-916 1307-1515(1560)
31 PRK11288 araG L-arabinose tran 100.0 2.1E-58 4.7E-63 564.9 38.4 189 720-916 268-467 (501)
32 PRK10982 galactose/methyl gala 100.0 2.3E-57 5E-62 554.9 38.5 190 719-916 262-462 (491)
33 PRK10938 putative molybdenum t 100.0 3E-56 6.6E-61 545.5 35.9 203 692-915 260-473 (490)
34 COG4172 ABC-type uncharacteriz 100.0 1.8E-54 3.9E-59 469.0 36.4 191 717-916 299-498 (534)
35 PRK15064 ABC transporter ATP-b 100.0 1.1E-53 2.4E-58 526.9 41.0 185 692-916 319-506 (530)
36 PRK11819 putative ABC transpor 100.0 2.1E-53 4.6E-58 525.7 42.8 188 692-916 324-513 (556)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1E-52 2.2E-57 519.8 43.1 188 692-916 322-511 (552)
38 PRK13409 putative ATPase RIL; 100.0 5.1E-53 1.1E-57 518.5 33.8 185 692-916 340-525 (590)
39 PRK10636 putative ABC transpor 100.0 1.1E-50 2.4E-55 506.2 39.5 184 692-916 312-498 (638)
40 PRK11147 ABC transporter ATPas 100.0 3.7E-50 8E-55 503.3 43.2 187 692-915 319-507 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 3.7E-49 8E-54 455.6 35.6 189 720-916 274-472 (500)
42 COG0488 Uup ATPase components 100.0 9.8E-49 2.1E-53 466.4 36.1 200 2-231 32-236 (530)
43 PLN03073 ABC transporter F fam 100.0 6.7E-48 1.5E-52 481.0 36.6 186 692-915 508-694 (718)
44 COG3845 ABC-type uncharacteriz 100.0 8.8E-45 1.9E-49 408.6 36.6 205 692-915 257-473 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 4.1E-44 8.9E-49 362.1 16.8 205 1-256 30-238 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 2.3E-42 5E-47 349.5 19.5 200 693-915 3-206 (240)
47 COG1135 AbcC ABC-type metal io 100.0 9.2E-42 2E-46 362.7 16.6 207 1-258 34-246 (339)
48 COG1116 TauB ABC-type nitrate/ 100.0 1.3E-40 2.9E-45 348.9 20.2 199 692-916 3-202 (248)
49 COG1136 SalX ABC-type antimicr 100.0 2.6E-40 5.6E-45 347.8 21.0 202 694-916 3-213 (226)
50 COG1125 OpuBA ABC-type proline 100.0 1.9E-40 4.2E-45 341.3 16.4 192 1-235 29-225 (309)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 9.7E-40 2.1E-44 348.1 21.9 203 692-916 4-210 (254)
52 COG1125 OpuBA ABC-type proline 100.0 3.1E-40 6.7E-45 339.9 16.3 199 693-915 2-206 (309)
53 COG2884 FtsE Predicted ATPase 100.0 3.8E-40 8.3E-45 325.2 16.0 198 693-914 2-205 (223)
54 COG3839 MalK ABC-type sugar tr 100.0 3.5E-40 7.6E-45 367.4 16.8 204 1-255 31-235 (338)
55 COG1135 AbcC ABC-type metal io 100.0 1E-39 2.2E-44 347.1 19.0 203 693-914 2-211 (339)
56 COG1116 TauB ABC-type nitrate/ 100.0 5.9E-40 1.3E-44 344.0 16.5 177 1-222 31-207 (248)
57 COG1118 CysA ABC-type sulfate/ 100.0 5.8E-40 1.3E-44 347.8 16.1 193 1-234 30-226 (345)
58 COG1131 CcmA ABC-type multidru 100.0 4.4E-39 9.5E-44 362.9 21.5 201 692-915 4-207 (293)
59 COG1117 PstB ABC-type phosphat 100.0 1.2E-39 2.5E-44 327.6 14.8 206 1-254 35-248 (253)
60 COG3842 PotA ABC-type spermidi 100.0 8.9E-40 1.9E-44 366.1 14.6 207 1-257 33-240 (352)
61 KOG0927 Predicted transporter 100.0 1.1E-38 2.4E-43 359.5 23.2 178 691-905 388-567 (614)
62 COG1127 Ttg2A ABC-type transpo 100.0 4.3E-39 9.3E-44 331.0 16.2 193 1-235 36-235 (263)
63 COG1127 Ttg2A ABC-type transpo 100.0 9.6E-39 2.1E-43 328.4 18.2 203 691-916 7-217 (263)
64 COG3839 MalK ABC-type sugar tr 100.0 1.2E-38 2.7E-43 355.0 19.5 200 692-915 3-204 (338)
65 COG1117 PstB ABC-type phosphat 100.0 1.2E-38 2.6E-43 320.4 17.3 196 691-905 6-209 (253)
66 COG1120 FepC ABC-type cobalami 100.0 1.1E-38 2.4E-43 342.3 18.0 204 692-916 2-210 (258)
67 COG3842 PotA ABC-type spermidi 100.0 2.4E-38 5.2E-43 354.6 20.2 202 691-915 4-207 (352)
68 COG3840 ThiQ ABC-type thiamine 100.0 1.2E-38 2.5E-43 311.5 14.2 191 1-234 27-218 (231)
69 COG3638 ABC-type phosphate/pho 100.0 3E-38 6.5E-43 323.9 17.2 205 692-916 3-219 (258)
70 COG1120 FepC ABC-type cobalami 100.0 1.1E-38 2.3E-43 342.3 14.6 195 1-234 30-227 (258)
71 COG1118 CysA ABC-type sulfate/ 100.0 1.8E-38 3.8E-43 336.6 15.7 191 717-916 14-209 (345)
72 COG1136 SalX ABC-type antimicr 100.0 4.5E-38 9.9E-43 330.8 18.0 181 1-224 33-220 (226)
73 COG1131 CcmA ABC-type multidru 100.0 4.9E-38 1.1E-42 354.4 19.2 194 1-237 33-228 (293)
74 COG4555 NatA ABC-type Na+ tran 100.0 1.6E-38 3.4E-43 316.2 13.2 187 719-916 16-204 (245)
75 COG4555 NatA ABC-type Na+ tran 100.0 2.3E-38 5.1E-43 314.9 14.2 191 1-235 30-222 (245)
76 COG3638 ABC-type phosphate/pho 100.0 2.3E-37 5E-42 317.4 17.0 200 1-235 32-237 (258)
77 PRK13537 nodulation ABC transp 100.0 2.5E-36 5.5E-41 344.3 23.7 201 691-915 6-208 (306)
78 COG2884 FtsE Predicted ATPase 100.0 1E-36 2.3E-41 300.9 16.4 185 1-229 30-220 (223)
79 COG1122 CbiO ABC-type cobalt t 100.0 8.7E-37 1.9E-41 328.9 17.2 191 2-235 33-228 (235)
80 COG4175 ProV ABC-type proline/ 100.0 6E-37 1.3E-41 324.5 14.2 206 1-257 56-268 (386)
81 COG1124 DppF ABC-type dipeptid 100.0 1.8E-36 3.9E-41 313.9 16.5 189 2-235 36-231 (252)
82 TIGR02314 ABC_MetN D-methionin 100.0 7.4E-36 1.6E-40 342.5 23.2 204 693-916 2-212 (343)
83 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.3E-36 5E-41 322.3 17.5 192 1-234 32-226 (254)
84 COG1137 YhbG ABC-type (unclass 100.0 2.4E-37 5.2E-42 307.4 9.1 192 716-916 15-210 (243)
85 PRK11650 ugpC glycerol-3-phosp 100.0 2.5E-36 5.4E-41 349.6 18.9 191 1-234 32-223 (356)
86 PRK11650 ugpC glycerol-3-phosp 100.0 7.5E-36 1.6E-40 345.6 22.6 201 692-915 3-205 (356)
87 TIGR00960 3a0501s02 Type II (G 100.0 1E-35 2.2E-40 324.6 22.1 201 693-915 2-208 (216)
88 PRK11432 fbpC ferric transport 100.0 1.2E-35 2.6E-40 342.8 23.5 200 692-915 6-207 (351)
89 PRK11432 fbpC ferric transport 100.0 4.2E-36 9.1E-41 346.5 19.3 191 1-234 34-225 (351)
90 TIGR03265 PhnT2 putative 2-ami 100.0 3.8E-36 8.3E-41 347.6 18.8 192 1-235 32-224 (353)
91 cd03261 ABC_Org_Solvent_Resist 100.0 1.3E-35 2.7E-40 328.1 22.1 200 694-916 2-208 (235)
92 TIGR03258 PhnT 2-aminoethylpho 100.0 4.2E-36 9E-41 347.5 19.0 192 1-234 33-227 (362)
93 TIGR03265 PhnT2 putative 2-ami 100.0 1.3E-35 2.7E-40 343.3 23.0 200 692-915 4-205 (353)
94 TIGR02314 ABC_MetN D-methionin 100.0 5.8E-36 1.3E-40 343.3 19.5 191 1-234 33-229 (343)
95 TIGR03258 PhnT 2-aminoethylpho 100.0 1.9E-35 4.2E-40 342.0 23.0 201 692-916 5-210 (362)
96 TIGR01186 proV glycine betaine 100.0 7.7E-36 1.7E-40 343.9 19.5 192 1-235 21-219 (363)
97 PRK13536 nodulation factor exp 100.0 3.7E-35 8E-40 337.7 24.6 202 691-916 40-243 (340)
98 COG1124 DppF ABC-type dipeptid 100.0 1.3E-35 2.9E-40 307.4 18.7 202 692-915 3-212 (252)
99 PRK09452 potA putrescine/sperm 100.0 7.4E-36 1.6E-40 346.6 18.7 191 1-234 42-233 (375)
100 COG3840 ThiQ ABC-type thiamine 100.0 6.7E-36 1.4E-40 292.2 15.0 183 722-915 16-200 (231)
101 cd03259 ABC_Carb_Solutes_like 100.0 3E-35 6.4E-40 320.2 21.4 198 694-915 2-201 (213)
102 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.6E-35 7.8E-40 320.9 21.6 201 694-915 2-210 (218)
103 PRK09452 potA putrescine/sperm 100.0 4.5E-35 9.8E-40 340.1 23.5 200 692-915 14-215 (375)
104 cd03269 ABC_putative_ATPase Th 100.0 4.9E-35 1.1E-39 317.8 22.1 197 694-915 2-198 (210)
105 PRK10851 sulfate/thiosulfate t 100.0 4.2E-35 9.1E-40 339.0 22.8 203 693-916 3-208 (353)
106 cd03293 ABC_NrtD_SsuB_transpor 100.0 6.9E-35 1.5E-39 318.9 22.7 201 694-916 2-203 (220)
107 PRK11607 potG putrescine trans 100.0 9E-35 2E-39 338.3 24.9 201 691-915 18-220 (377)
108 cd03265 ABC_DrrA DrrA is the A 100.0 6.9E-35 1.5E-39 318.8 22.0 198 694-915 2-202 (220)
109 TIGR02673 FtsE cell division A 100.0 6.7E-35 1.5E-39 317.8 21.8 200 693-915 2-207 (214)
110 COG4148 ModC ABC-type molybdat 100.0 6E-36 1.3E-40 311.4 12.7 186 1-235 26-218 (352)
111 COG4181 Predicted ABC-type tra 100.0 4.2E-35 9.1E-40 283.3 17.2 189 716-916 21-217 (228)
112 PRK11607 potG putrescine trans 100.0 2.9E-35 6.3E-40 342.4 19.4 191 1-234 47-238 (377)
113 TIGR01288 nodI ATP-binding ABC 100.0 9.6E-35 2.1E-39 332.2 23.3 201 692-916 4-206 (303)
114 TIGR01188 drrA daunorubicin re 100.0 4.3E-35 9.3E-40 334.9 20.4 188 717-915 5-194 (302)
115 COG0411 LivG ABC-type branched 100.0 8.3E-36 1.8E-40 309.4 13.1 204 1-235 32-239 (250)
116 COG4525 TauB ABC-type taurine 100.0 4.3E-35 9.3E-40 289.3 17.4 191 1-236 33-225 (259)
117 cd03301 ABC_MalK_N The N-termi 100.0 9.8E-35 2.1E-39 316.2 21.9 198 694-915 2-201 (213)
118 cd03292 ABC_FtsE_transporter F 100.0 8.6E-35 1.9E-39 317.1 21.4 199 694-915 2-206 (214)
119 COG1122 CbiO ABC-type cobalt t 100.0 3.5E-35 7.6E-40 316.4 17.9 202 692-916 3-210 (235)
120 PRK10851 sulfate/thiosulfate t 100.0 3.1E-35 6.7E-40 340.1 18.5 195 1-234 30-225 (353)
121 cd03266 ABC_NatA_sodium_export 100.0 9.2E-35 2E-39 317.7 21.2 203 693-915 2-206 (218)
122 PRK11000 maltose/maltodextrin 100.0 1.1E-34 2.3E-39 338.5 23.1 200 692-915 3-204 (369)
123 COG1137 YhbG ABC-type (unclass 100.0 5E-36 1.1E-40 298.0 10.0 193 1-235 32-228 (243)
124 PRK13537 nodulation ABC transp 100.0 4.2E-35 9E-40 334.3 19.0 191 1-235 35-227 (306)
125 TIGR01186 proV glycine betaine 100.0 7.7E-35 1.7E-39 335.6 21.4 189 716-915 4-200 (363)
126 COG4525 TauB ABC-type taurine 100.0 4.6E-35 9.9E-40 289.1 16.4 184 718-914 18-202 (259)
127 cd03226 ABC_cobalt_CbiO_domain 100.0 5.6E-35 1.2E-39 315.9 18.7 183 718-915 13-196 (205)
128 cd03296 ABC_CysA_sulfate_impor 100.0 1.8E-34 3.9E-39 319.6 23.1 203 693-916 3-208 (239)
129 cd03234 ABCG_White The White s 100.0 1.9E-34 4E-39 316.6 23.0 210 693-916 4-215 (226)
130 PRK11153 metN DL-methionine tr 100.0 1.3E-34 2.9E-39 335.2 23.0 204 693-916 2-212 (343)
131 cd03219 ABC_Mj1267_LivG_branch 100.0 1.4E-34 3E-39 320.3 21.9 202 694-916 2-214 (236)
132 cd03268 ABC_BcrA_bacitracin_re 100.0 1.2E-34 2.6E-39 314.1 20.6 194 694-915 2-196 (208)
133 cd03262 ABC_HisP_GlnQ_permease 100.0 1.6E-34 3.5E-39 314.6 21.3 199 694-915 2-205 (213)
134 cd03218 ABC_YhbG The ABC trans 100.0 1.8E-34 4E-39 318.5 21.8 199 694-916 2-204 (232)
135 PRK11000 maltose/maltodextrin 100.0 7.2E-35 1.6E-39 340.0 18.8 191 1-234 31-222 (369)
136 TIGR01188 drrA daunorubicin re 100.0 7E-35 1.5E-39 333.1 18.3 191 1-235 21-213 (302)
137 PRK09536 btuD corrinoid ABC tr 100.0 1.6E-34 3.6E-39 336.9 21.7 203 692-915 3-209 (402)
138 PRK11629 lolD lipoprotein tran 100.0 3.3E-34 7.2E-39 316.2 22.8 203 692-915 5-215 (233)
139 TIGR03522 GldA_ABC_ATP gliding 100.0 2.6E-34 5.7E-39 327.9 22.7 198 693-915 3-202 (301)
140 cd03261 ABC_Org_Solvent_Resist 100.0 9.7E-35 2.1E-39 321.1 18.4 191 1-233 28-224 (235)
141 cd03225 ABC_cobalt_CbiO_domain 100.0 1.8E-34 4E-39 313.6 19.9 187 718-915 14-204 (211)
142 COG4152 ABC-type uncharacteriz 100.0 1.3E-34 2.7E-39 296.4 16.9 189 716-916 13-201 (300)
143 cd03258 ABC_MetN_methionine_tr 100.0 2.6E-34 5.5E-39 317.4 20.8 204 693-916 2-212 (233)
144 PRK11248 tauB taurine transpor 100.0 4.7E-34 1E-38 318.1 22.9 197 693-915 2-199 (255)
145 TIGR02211 LolD_lipo_ex lipopro 100.0 4.1E-34 8.8E-39 313.3 22.1 202 693-915 2-211 (221)
146 PRK10908 cell division protein 100.0 4.6E-34 9.9E-39 312.8 22.4 200 693-915 2-207 (222)
147 cd03235 ABC_Metallic_Cations A 100.0 1.6E-34 3.4E-39 314.5 18.5 188 718-915 12-202 (213)
148 TIGR01166 cbiO cobalt transpor 100.0 2.8E-34 6.1E-39 306.5 20.1 179 717-905 4-188 (190)
149 TIGR01257 rim_protein retinal- 100.0 2.9E-32 6.4E-37 362.0 43.7 201 691-914 927-1129(2272)
150 cd03260 ABC_PstB_phosphate_tra 100.0 2.5E-34 5.4E-39 316.2 20.1 200 694-916 2-211 (227)
151 cd03256 ABC_PhnC_transporter A 100.0 2.5E-34 5.5E-39 319.4 20.3 203 694-916 2-216 (241)
152 TIGR03608 L_ocin_972_ABC putat 100.0 3.9E-34 8.5E-39 309.9 21.1 185 718-914 11-202 (206)
153 cd03263 ABC_subfamily_A The AB 100.0 3.9E-34 8.4E-39 313.2 21.0 200 694-916 2-203 (220)
154 PRK09493 glnQ glutamine ABC tr 100.0 5.9E-34 1.3E-38 315.8 22.6 200 693-915 2-206 (240)
155 COG0410 LivF ABC-type branched 100.0 1.8E-34 3.9E-39 297.2 16.9 190 1-234 31-225 (237)
156 PRK11153 metN DL-methionine tr 100.0 2.2E-34 4.7E-39 333.4 19.2 191 1-234 33-229 (343)
157 PRK11264 putative amino-acid A 100.0 7E-34 1.5E-38 317.5 22.5 200 693-915 4-214 (250)
158 cd03224 ABC_TM1139_LivF_branch 100.0 4.2E-34 9E-39 313.6 19.9 197 694-916 2-203 (222)
159 PRK13637 cbiO cobalt transport 100.0 6.6E-34 1.4E-38 322.4 22.0 205 693-916 3-216 (287)
160 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.9E-34 1.3E-38 316.1 21.2 200 694-916 2-207 (242)
161 PRK13538 cytochrome c biogenes 100.0 8.1E-34 1.8E-38 306.2 21.6 187 693-905 2-190 (204)
162 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.6E-34 1E-38 321.0 20.4 190 716-916 35-232 (269)
163 TIGR02315 ABC_phnC phosphonate 100.0 3.4E-34 7.3E-39 318.7 19.1 204 693-916 2-217 (243)
164 KOG0058 Peptide exporter, ABC 100.0 6.6E-35 1.4E-39 343.1 14.0 193 1-235 496-691 (716)
165 PRK13536 nodulation factor exp 100.0 3.3E-34 7.2E-39 329.8 19.4 191 1-235 69-261 (340)
166 PRK11831 putative ABC transpor 100.0 1E-33 2.2E-38 318.6 22.9 202 692-916 7-215 (269)
167 cd03264 ABC_drug_resistance_li 100.0 7E-34 1.5E-38 308.9 20.8 196 694-915 2-199 (211)
168 cd03265 ABC_DrrA DrrA is the A 100.0 3.5E-34 7.5E-39 313.3 18.1 189 1-232 28-218 (220)
169 cd03259 ABC_Carb_Solutes_like 100.0 3.6E-34 7.7E-39 311.7 17.8 185 1-228 28-213 (213)
170 PRK10070 glycine betaine trans 100.0 3.9E-34 8.5E-39 333.5 19.2 191 1-234 56-253 (400)
171 cd03257 ABC_NikE_OppD_transpor 100.0 9.5E-34 2.1E-38 312.2 21.3 206 693-916 2-217 (228)
172 PRK13637 cbiO cobalt transport 100.0 5.4E-34 1.2E-38 323.1 19.5 191 1-234 35-233 (287)
173 PRK13647 cbiO cobalt transport 100.0 1.1E-33 2.4E-38 318.7 21.8 201 692-915 4-208 (274)
174 PRK10895 lipopolysaccharide AB 100.0 1.1E-33 2.3E-38 314.0 21.1 201 693-916 4-208 (241)
175 PRK11247 ssuB aliphatic sulfon 100.0 1.1E-33 2.4E-38 314.4 21.0 193 691-915 11-204 (257)
176 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.1E-33 4.6E-38 310.4 23.2 198 693-915 2-202 (236)
177 TIGR01189 ccmA heme ABC export 100.0 1.5E-33 3.3E-38 302.8 21.2 185 694-905 2-188 (198)
178 COG0411 LivG ABC-type branched 100.0 5.3E-34 1.1E-38 296.0 16.9 193 716-916 15-221 (250)
179 PRK13634 cbiO cobalt transport 100.0 1.3E-33 2.9E-38 320.4 21.3 204 693-916 3-217 (290)
180 PRK13651 cobalt transporter AT 100.0 1.4E-33 3.1E-38 320.8 21.6 205 693-916 3-236 (305)
181 KOG0058 Peptide exporter, ABC 100.0 2.3E-34 5E-39 338.5 15.3 204 690-915 463-672 (716)
182 PRK13539 cytochrome c biogenes 100.0 1.6E-33 3.4E-38 304.6 20.5 186 693-905 3-188 (207)
183 COG0410 LivF ABC-type branched 100.0 1.1E-33 2.3E-38 291.4 18.2 198 693-915 4-207 (237)
184 PRK10619 histidine/lysine/argi 100.0 2.6E-33 5.6E-38 313.7 23.0 202 692-916 5-223 (257)
185 PRK15079 oligopeptide ABC tran 100.0 2.3E-33 5.1E-38 322.0 23.1 215 692-915 8-232 (331)
186 cd03294 ABC_Pro_Gly_Bertaine T 100.0 9.1E-34 2E-38 318.7 19.2 191 1-234 52-249 (269)
187 TIGR00972 3a0107s01c2 phosphat 100.0 2.5E-33 5.4E-38 312.1 22.5 201 693-916 2-214 (247)
188 cd03293 ABC_NrtD_SsuB_transpor 100.0 9E-34 2E-38 310.0 18.6 186 1-231 32-219 (220)
189 PRK13543 cytochrome c biogenes 100.0 2.8E-33 6.1E-38 304.3 22.2 196 692-914 11-206 (214)
190 TIGR01288 nodI ATP-binding ABC 100.0 9.2E-34 2E-38 324.1 19.1 191 1-235 32-224 (303)
191 cd03219 ABC_Mj1267_LivG_branch 100.0 8.9E-34 1.9E-38 313.9 18.4 199 1-233 28-230 (236)
192 TIGR00960 3a0501s02 Type II (G 100.0 5.2E-34 1.1E-38 311.1 16.3 180 1-224 31-216 (216)
193 cd03296 ABC_CysA_sulfate_impor 100.0 9.2E-34 2E-38 313.9 18.3 194 1-233 30-224 (239)
194 PRK13540 cytochrome c biogenes 100.0 3E-33 6.4E-38 300.8 21.7 185 693-905 2-188 (200)
195 TIGR03415 ABC_choXWV_ATP choli 100.0 9.9E-34 2.1E-38 327.6 19.2 191 1-234 52-253 (382)
196 PRK10584 putative ABC transpor 100.0 3.8E-33 8.2E-38 307.0 23.0 203 692-915 6-216 (228)
197 PRK13631 cbiO cobalt transport 100.0 2.3E-33 5E-38 320.9 22.0 206 691-916 20-247 (320)
198 PRK11124 artP arginine transpo 100.0 2.8E-33 6E-38 310.9 21.9 199 693-915 3-211 (242)
199 COG1245 Predicted ATPase, RNas 100.0 4.3E-33 9.4E-38 307.2 23.0 156 725-905 361-517 (591)
200 cd03231 ABC_CcmA_heme_exporter 100.0 2E-33 4.4E-38 302.2 20.2 191 694-914 2-194 (201)
201 PRK13643 cbiO cobalt transport 100.0 2.5E-33 5.5E-38 317.8 22.0 204 693-916 2-215 (288)
202 cd03258 ABC_MetN_methionine_tr 100.0 9.7E-34 2.1E-38 312.8 18.1 190 1-233 33-228 (233)
203 PRK11144 modC molybdate transp 100.0 8E-34 1.7E-38 329.9 18.3 185 1-234 26-217 (352)
204 COG0444 DppD ABC-type dipeptid 100.0 1.3E-33 2.8E-38 306.5 18.4 215 1-258 33-258 (316)
205 PRK13646 cbiO cobalt transport 100.0 2.3E-33 4.9E-38 318.1 21.2 205 692-916 2-217 (286)
206 PRK13650 cbiO cobalt transport 100.0 2E-33 4.3E-38 317.4 20.6 202 692-915 4-210 (279)
207 TIGR03522 GldA_ABC_ATP gliding 100.0 1.3E-33 2.8E-38 322.2 19.0 190 1-235 30-221 (301)
208 PRK14273 phosphate ABC transpo 100.0 4.3E-33 9.3E-38 311.6 22.7 202 691-915 6-219 (254)
209 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.4E-33 5.1E-38 304.8 20.0 182 723-915 16-199 (211)
210 PRK13641 cbiO cobalt transport 100.0 3.1E-33 6.8E-38 317.1 21.8 206 692-916 2-216 (287)
211 cd03218 ABC_YhbG The ABC trans 100.0 1.4E-33 3E-38 311.5 18.4 189 1-233 28-220 (232)
212 PRK14247 phosphate ABC transpo 100.0 4.8E-33 1E-37 310.6 23.0 204 692-916 3-216 (250)
213 TIGR03005 ectoine_ehuA ectoine 100.0 3.6E-33 7.7E-38 311.8 21.9 200 694-916 2-218 (252)
214 PRK13643 cbiO cobalt transport 100.0 1E-33 2.2E-38 321.0 17.7 205 1-249 34-250 (288)
215 TIGR01187 potA spermidine/putr 100.0 1.3E-33 2.8E-38 324.8 18.8 188 4-234 1-189 (325)
216 TIGR03411 urea_trans_UrtD urea 100.0 4.1E-33 9E-38 309.6 22.0 202 693-916 3-213 (242)
217 cd03264 ABC_drug_resistance_li 100.0 1.4E-33 2.9E-38 306.7 17.6 183 1-228 27-211 (211)
218 PRK15079 oligopeptide ABC tran 100.0 1.3E-33 2.9E-38 324.0 18.4 193 1-234 49-250 (331)
219 PRK13634 cbiO cobalt transport 100.0 1.4E-33 2.9E-38 320.3 18.3 191 1-234 35-234 (290)
220 TIGR01978 sufC FeS assembly AT 100.0 4.6E-33 9.9E-38 309.8 22.2 204 694-915 2-215 (243)
221 PRK11614 livF leucine/isoleuci 100.0 2.8E-33 6E-38 309.9 20.3 199 692-916 5-208 (237)
222 TIGR02142 modC_ABC molybdenum 100.0 1.5E-33 3.3E-38 328.2 19.1 189 1-234 25-220 (354)
223 PRK13548 hmuV hemin importer A 100.0 3.8E-33 8.3E-38 311.9 21.6 200 693-916 3-212 (258)
224 cd03301 ABC_MalK_N The N-termi 100.0 1.7E-33 3.6E-38 306.5 18.3 185 1-228 28-213 (213)
225 cd03269 ABC_putative_ATPase Th 100.0 1.3E-33 2.9E-38 306.5 17.4 183 1-228 28-210 (210)
226 PRK10070 glycine betaine trans 100.0 2.6E-33 5.7E-38 326.6 21.0 189 717-916 40-236 (400)
227 TIGR03740 galliderm_ABC gallid 100.0 4.6E-33 1E-37 305.1 21.8 194 694-916 2-195 (223)
228 PRK13636 cbiO cobalt transport 100.0 4.1E-33 8.9E-38 315.5 22.0 203 691-916 4-213 (283)
229 PRK13651 cobalt transporter AT 100.0 1.2E-33 2.5E-38 321.5 17.4 190 1-234 35-253 (305)
230 PRK11300 livG leucine/isoleuci 100.0 4.4E-33 9.5E-38 312.0 21.8 204 692-916 5-225 (255)
231 COG2274 SunT ABC-type bacterio 100.0 6.7E-34 1.5E-38 350.2 16.6 193 1-235 501-696 (709)
232 PRK11231 fecE iron-dicitrate t 100.0 3.5E-33 7.7E-38 312.2 20.9 203 693-916 3-209 (255)
233 PRK14268 phosphate ABC transpo 100.0 6.9E-33 1.5E-37 310.3 22.9 201 691-915 11-223 (258)
234 cd03256 ABC_PhnC_transporter A 100.0 2E-33 4.4E-38 312.2 18.5 198 1-233 29-232 (241)
235 PRK14267 phosphate ABC transpo 100.0 6.4E-33 1.4E-37 310.2 22.5 204 692-916 4-219 (253)
236 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.3E-33 2.8E-38 308.7 16.4 180 1-224 32-218 (218)
237 PRK13631 cbiO cobalt transport 100.0 1.9E-33 4E-38 321.7 18.4 200 1-245 54-278 (320)
238 PRK13644 cbiO cobalt transport 100.0 4.3E-33 9.3E-38 313.8 21.0 199 693-915 2-205 (274)
239 cd03233 ABC_PDR_domain1 The pl 100.0 6E-33 1.3E-37 298.4 21.2 185 692-916 3-191 (202)
240 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.2E-33 4.8E-38 311.5 18.3 190 1-233 29-223 (242)
241 PRK10575 iron-hydroxamate tran 100.0 4.6E-33 1E-37 312.7 21.1 205 691-916 10-219 (265)
242 PRK13635 cbiO cobalt transport 100.0 4E-33 8.6E-38 314.7 20.6 201 692-915 5-210 (279)
243 cd03260 ABC_PstB_phosphate_tra 100.0 1.5E-33 3.3E-38 309.9 16.8 189 1-232 28-226 (227)
244 PRK14241 phosphate transporter 100.0 9E-33 2E-37 309.5 23.2 203 692-916 4-218 (258)
245 cd03263 ABC_subfamily_A The AB 100.0 1.8E-33 3.8E-38 308.0 17.1 188 1-233 30-219 (220)
246 TIGR02982 heterocyst_DevA ABC 100.0 6.8E-33 1.5E-37 302.9 21.6 203 693-915 2-211 (220)
247 PRK13652 cbiO cobalt transport 100.0 7.3E-33 1.6E-37 312.7 22.2 201 693-916 4-209 (277)
248 KOG0057 Mitochondrial Fe/S clu 100.0 1.7E-33 3.6E-38 319.5 16.9 199 689-916 348-556 (591)
249 PRK13647 cbiO cobalt transport 100.0 3.5E-33 7.6E-38 314.5 19.4 189 1-233 33-225 (274)
250 cd03266 ABC_NatA_sodium_export 100.0 1.9E-33 4.1E-38 307.3 16.6 184 1-228 33-218 (218)
251 PRK13638 cbiO cobalt transport 100.0 5.7E-33 1.2E-37 313.0 20.9 200 693-916 2-207 (271)
252 PRK14242 phosphate transporter 100.0 1.2E-32 2.6E-37 308.0 23.2 208 690-916 4-219 (253)
253 PRK10744 pstB phosphate transp 100.0 9.8E-33 2.1E-37 309.4 22.5 207 687-916 8-226 (260)
254 cd03268 ABC_BcrA_bacitracin_re 100.0 2.8E-33 6.2E-38 303.4 17.6 180 1-228 28-208 (208)
255 COG4181 Predicted ABC-type tra 100.0 3.3E-33 7.2E-38 270.2 16.0 181 2-226 39-226 (228)
256 cd03226 ABC_cobalt_CbiO_domain 100.0 2E-33 4.4E-38 303.7 16.3 177 1-225 28-205 (205)
257 cd03300 ABC_PotA_N PotA is an 100.0 1E-32 2.2E-37 304.0 22.2 199 694-916 2-202 (232)
258 PRK10253 iron-enterobactin tra 100.0 5.4E-33 1.2E-37 312.2 20.4 205 691-916 6-215 (265)
259 PRK09984 phosphonate/organopho 100.0 7.9E-33 1.7E-37 310.7 21.7 205 692-915 4-223 (262)
260 PRK13632 cbiO cobalt transport 100.0 7.9E-33 1.7E-37 311.6 21.7 202 691-915 6-212 (271)
261 cd03224 ABC_TM1139_LivF_branch 100.0 3E-33 6.5E-38 306.8 17.7 187 1-233 28-219 (222)
262 TIGR01277 thiQ thiamine ABC tr 100.0 6.8E-33 1.5E-37 301.3 20.3 197 694-916 2-200 (213)
263 TIGR02769 nickel_nikE nickel i 100.0 1.1E-32 2.3E-37 309.7 22.5 210 693-916 3-222 (265)
264 COG4598 HisP ABC-type histidin 100.0 8.3E-34 1.8E-38 276.0 11.6 204 1-255 34-253 (256)
265 PRK11629 lolD lipoprotein tran 100.0 4.5E-33 9.8E-38 307.2 18.9 186 1-230 37-229 (233)
266 PRK13650 cbiO cobalt transport 100.0 3.9E-33 8.4E-38 315.1 18.7 190 1-234 35-228 (279)
267 TIGR03415 ABC_choXWV_ATP choli 100.0 6E-33 1.3E-37 321.1 20.8 189 716-915 35-235 (382)
268 PRK09536 btuD corrinoid ABC tr 100.0 2.8E-33 6.1E-38 326.5 18.0 194 1-234 31-227 (402)
269 PRK13649 cbiO cobalt transport 100.0 9.2E-33 2E-37 313.1 21.8 204 693-916 3-216 (280)
270 TIGR03873 F420-0_ABC_ATP propo 100.0 8.1E-33 1.7E-37 309.5 21.0 203 693-916 2-208 (256)
271 TIGR03410 urea_trans_UrtE urea 100.0 6.5E-33 1.4E-37 305.6 19.9 196 694-916 2-203 (230)
272 PRK14245 phosphate ABC transpo 100.0 1.6E-32 3.4E-37 306.2 23.2 206 692-916 3-216 (250)
273 TIGR02315 ABC_phnC phosphonate 100.0 2.7E-33 5.8E-38 311.5 16.9 198 1-233 30-233 (243)
274 TIGR01184 ntrCD nitrate transp 100.0 6E-33 1.3E-37 305.0 19.4 185 721-916 1-186 (230)
275 cd03267 ABC_NatA_like Similar 100.0 1E-32 2.2E-37 304.4 21.0 190 716-916 32-225 (236)
276 KOG0062 ATPase component of AB 100.0 1.1E-32 2.5E-37 309.4 21.6 179 690-904 360-539 (582)
277 cd03232 ABC_PDR_domain2 The pl 100.0 1.3E-32 2.8E-37 293.5 21.1 178 692-916 3-180 (192)
278 PRK11831 putative ABC transpor 100.0 4.6E-33 9.9E-38 313.2 18.4 192 1-234 35-232 (269)
279 PRK11022 dppD dipeptide transp 100.0 2E-32 4.3E-37 314.4 24.0 207 692-915 3-224 (326)
280 PRK13639 cbiO cobalt transport 100.0 1.2E-32 2.6E-37 310.6 21.8 201 693-916 2-208 (275)
281 COG4988 CydD ABC-type transpor 100.0 2.5E-33 5.3E-38 324.4 16.4 186 1-235 349-543 (559)
282 PRK11308 dppF dipeptide transp 100.0 1.9E-32 4E-37 314.4 23.5 211 692-915 5-225 (327)
283 PRK14235 phosphate transporter 100.0 1.9E-32 4.1E-37 307.9 23.1 202 692-915 19-232 (267)
284 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.5E-33 9.7E-38 302.6 17.3 185 1-228 26-211 (211)
285 PRK14237 phosphate transporter 100.0 2.5E-32 5.4E-37 306.9 23.8 211 687-916 15-233 (267)
286 cd03213 ABCG_EPDR ABCG transpo 100.0 1.6E-32 3.4E-37 293.2 20.9 179 692-916 3-183 (194)
287 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.5E-33 1.6E-37 306.0 19.0 191 1-235 29-221 (236)
288 PRK13646 cbiO cobalt transport 100.0 3.7E-33 8.1E-38 316.3 17.0 190 1-234 35-234 (286)
289 TIGR00968 3a0106s01 sulfate AB 100.0 1.7E-32 3.8E-37 302.9 21.8 198 694-915 2-201 (237)
290 PRK13549 xylose transporter AT 100.0 1.1E-32 2.3E-37 338.5 22.3 206 692-916 5-214 (506)
291 TIGR01184 ntrCD nitrate transp 100.0 5.7E-33 1.2E-37 305.2 17.8 189 1-232 13-201 (230)
292 PRK14250 phosphate ABC transpo 100.0 1.1E-32 2.4E-37 305.3 20.1 196 692-916 3-203 (241)
293 PRK14256 phosphate ABC transpo 100.0 2.7E-32 5.9E-37 304.7 23.3 207 692-916 4-218 (252)
294 cd03297 ABC_ModC_molybdenum_tr 100.0 7.3E-33 1.6E-37 301.5 18.1 183 1-228 25-214 (214)
295 PRK14269 phosphate ABC transpo 100.0 2E-32 4.2E-37 304.5 21.7 205 693-915 3-211 (246)
296 KOG0055 Multidrug/pheromone ex 100.0 2.6E-33 5.5E-38 347.9 15.7 192 2-235 1019-1213(1228)
297 PRK11308 dppF dipeptide transp 100.0 7.5E-33 1.6E-37 317.7 18.5 192 1-234 43-243 (327)
298 PRK09473 oppD oligopeptide tra 100.0 7.4E-33 1.6E-37 318.2 18.4 199 1-235 44-251 (330)
299 PRK14259 phosphate ABC transpo 100.0 2.2E-32 4.7E-37 307.5 21.9 201 691-916 12-224 (269)
300 PRK09473 oppD oligopeptide tra 100.0 2.9E-32 6.3E-37 313.2 23.3 210 692-915 12-232 (330)
301 PRK13547 hmuV hemin importer A 100.0 1.5E-32 3.1E-37 308.0 20.4 205 693-916 2-226 (272)
302 PRK11264 putative amino-acid A 100.0 7.4E-33 1.6E-37 309.2 17.8 190 1-234 31-232 (250)
303 PRK09493 glnQ glutamine ABC tr 100.0 7E-33 1.5E-37 307.3 17.5 190 1-234 29-224 (240)
304 TIGR02142 modC_ABC molybdenum 100.0 1.9E-32 4E-37 319.0 21.5 180 723-915 15-202 (354)
305 PRK13635 cbiO cobalt transport 100.0 1.2E-32 2.5E-37 310.8 19.1 190 1-234 35-228 (279)
306 PRK11248 tauB taurine transpor 100.0 1.1E-32 2.5E-37 307.0 18.7 186 1-231 29-216 (255)
307 PRK10247 putative ABC transpor 100.0 2.1E-32 4.7E-37 299.7 20.5 196 692-915 7-207 (225)
308 cd03292 ABC_FtsE_transporter F 100.0 7.5E-33 1.6E-37 301.8 16.9 180 1-224 29-214 (214)
309 cd03299 ABC_ModC_like Archeal 100.0 2.9E-32 6.2E-37 300.8 21.7 186 720-916 14-201 (235)
310 PRK11144 modC molybdate transp 100.0 2.1E-32 4.5E-37 318.0 21.6 176 723-915 16-199 (352)
311 KOG0057 Mitochondrial Fe/S clu 100.0 2.3E-33 5E-38 318.4 13.1 191 2-235 381-574 (591)
312 PRK15093 antimicrobial peptide 100.0 3.6E-32 7.8E-37 313.6 23.4 209 692-915 3-229 (330)
313 cd03297 ABC_ModC_molybdenum_tr 100.0 2.3E-32 5.1E-37 297.5 20.6 179 723-915 16-202 (214)
314 PRK13645 cbiO cobalt transport 100.0 2.2E-32 4.7E-37 311.1 21.1 206 692-916 6-222 (289)
315 PRK11247 ssuB aliphatic sulfon 100.0 1E-32 2.2E-37 306.7 18.0 180 1-231 40-219 (257)
316 PRK13648 cbiO cobalt transport 100.0 3.3E-32 7.1E-37 306.5 22.4 202 691-915 6-212 (269)
317 TIGR02324 CP_lyasePhnL phospho 100.0 4.5E-32 9.9E-37 297.6 22.9 207 693-916 2-220 (224)
318 PRK15112 antimicrobial peptide 100.0 2.5E-32 5.3E-37 307.0 21.1 211 692-916 4-221 (267)
319 PRK13636 cbiO cobalt transport 100.0 1.2E-32 2.7E-37 311.6 18.5 191 1-234 34-230 (283)
320 TIGR02211 LolD_lipo_ex lipopro 100.0 1E-32 2.2E-37 302.2 17.2 181 1-225 33-220 (221)
321 TIGR02673 FtsE cell division A 100.0 1E-32 2.2E-37 300.6 17.1 179 1-223 30-214 (214)
322 PRK10771 thiQ thiamine transpo 100.0 2.2E-32 4.8E-37 301.5 19.9 198 693-916 2-201 (232)
323 COG4559 ABC-type hemin transpo 100.0 1.3E-32 2.9E-37 276.1 16.4 202 693-916 2-212 (259)
324 PRK13633 cobalt transporter AT 100.0 2.9E-32 6.2E-37 308.4 21.3 206 692-916 4-215 (280)
325 PRK13641 cbiO cobalt transport 100.0 1E-32 2.2E-37 312.9 17.6 190 1-234 35-233 (287)
326 PRK10771 thiQ thiamine transpo 100.0 1.3E-32 2.9E-37 303.2 18.0 191 1-234 27-218 (232)
327 PRK13640 cbiO cobalt transport 100.0 2.8E-32 6E-37 308.6 21.0 204 692-916 5-214 (282)
328 COG4988 CydD ABC-type transpor 100.0 7.9E-33 1.7E-37 320.2 16.7 199 690-916 318-525 (559)
329 PRK13541 cytochrome c biogenes 100.0 4.9E-32 1.1E-36 290.2 21.7 183 693-905 2-184 (195)
330 PRK11022 dppD dipeptide transp 100.0 1.4E-32 3.1E-37 315.6 18.6 198 1-234 35-242 (326)
331 COG4619 ABC-type uncharacteriz 100.0 3.2E-33 6.9E-38 269.5 11.0 188 716-916 14-205 (223)
332 TIGR01277 thiQ thiamine ABC tr 100.0 1.9E-32 4.1E-37 297.8 18.5 186 1-229 26-212 (213)
333 COG4152 ABC-type uncharacteriz 100.0 7.5E-33 1.6E-37 283.5 14.3 192 1-237 30-221 (300)
334 PRK10895 lipopolysaccharide AB 100.0 1.2E-32 2.7E-37 305.5 17.3 191 1-234 31-225 (241)
335 TIGR02770 nickel_nikD nickel i 100.0 1.6E-32 3.4E-37 302.0 18.1 191 1-234 14-214 (230)
336 COG4559 ABC-type hemin transpo 100.0 9.1E-33 2E-37 277.3 14.5 192 1-234 29-229 (259)
337 TIGR02868 CydC thiol reductant 100.0 7.5E-33 1.6E-37 343.0 17.2 188 691-904 333-529 (529)
338 COG0444 DppD ABC-type dipeptid 100.0 4.7E-32 1E-36 294.5 21.1 210 693-915 2-224 (316)
339 cd03230 ABC_DR_subfamily_A Thi 100.0 3E-32 6.6E-37 285.7 19.0 162 694-915 2-165 (173)
340 PRK14270 phosphate ABC transpo 100.0 5.6E-32 1.2E-36 302.0 22.3 202 692-916 4-217 (251)
341 PRK14260 phosphate ABC transpo 100.0 6.1E-32 1.3E-36 302.8 22.6 201 692-915 7-219 (259)
342 PRK14240 phosphate transporter 100.0 6.2E-32 1.4E-36 301.6 22.6 201 692-915 3-215 (250)
343 cd03257 ABC_NikE_OppD_transpor 100.0 1.6E-32 3.5E-37 302.3 17.6 187 1-228 33-228 (228)
344 PRK10908 cell division protein 100.0 1.6E-32 3.6E-37 300.5 17.5 181 1-225 30-216 (222)
345 PRK10762 D-ribose transporter 100.0 3.1E-32 6.7E-37 334.1 21.9 204 692-916 4-212 (501)
346 PRK14239 phosphate transporter 100.0 6.2E-32 1.3E-36 302.1 22.4 202 692-916 5-218 (252)
347 PRK14274 phosphate ABC transpo 100.0 6.9E-32 1.5E-36 302.6 22.8 202 692-916 12-225 (259)
348 PRK15056 manganese/iron transp 100.0 3.8E-32 8.1E-37 306.3 20.7 204 692-915 6-212 (272)
349 COG2274 SunT ABC-type bacterio 100.0 2.1E-32 4.4E-37 337.1 20.2 203 687-916 466-678 (709)
350 PRK14244 phosphate ABC transpo 100.0 5.9E-32 1.3E-36 301.8 22.1 205 694-916 7-219 (251)
351 PRK14262 phosphate ABC transpo 100.0 6.5E-32 1.4E-36 301.5 22.3 206 692-916 3-216 (250)
352 COG4175 ProV ABC-type proline/ 100.0 8.4E-33 1.8E-37 293.1 14.1 186 718-914 41-234 (386)
353 TIGR00972 3a0107s01c2 phosphat 100.0 2.1E-32 4.5E-37 304.7 18.0 192 1-234 29-231 (247)
354 PRK11614 livF leucine/isoleuci 100.0 1.7E-32 3.7E-37 303.6 17.1 188 1-234 33-225 (237)
355 COG4161 ArtP ABC-type arginine 100.0 1.8E-32 3.8E-37 261.8 14.6 188 2-232 31-227 (242)
356 PRK13642 cbiO cobalt transport 100.0 5.2E-32 1.1E-36 305.8 21.1 202 692-915 4-210 (277)
357 TIGR03410 urea_trans_UrtE urea 100.0 2.2E-32 4.7E-37 301.4 17.7 187 1-233 28-219 (230)
358 cd03234 ABCG_White The White s 100.0 3.4E-32 7.3E-37 298.7 19.0 187 1-228 35-226 (226)
359 PRK00635 excinuclease ABC subu 100.0 5.1E-31 1.1E-35 344.7 33.3 120 789-916 759-882 (1809)
360 PRK13652 cbiO cobalt transport 100.0 2.2E-32 4.8E-37 308.8 17.8 191 1-234 32-226 (277)
361 PRK11300 livG leucine/isoleuci 100.0 2.6E-32 5.7E-37 305.7 18.1 205 1-233 33-241 (255)
362 PRK14257 phosphate ABC transpo 100.0 1.2E-31 2.5E-36 307.7 23.7 209 691-916 79-295 (329)
363 TIGR02770 nickel_nikD nickel i 100.0 3.6E-32 7.9E-37 299.2 18.8 188 720-916 1-197 (230)
364 PRK14253 phosphate ABC transpo 100.0 8.6E-32 1.9E-36 300.3 22.0 205 692-915 3-214 (249)
365 TIGR03005 ectoine_ehuA ectoine 100.0 2.7E-32 5.9E-37 304.7 18.0 191 1-234 28-235 (252)
366 PRK14236 phosphate transporter 100.0 1.3E-31 2.9E-36 301.9 23.7 204 690-916 23-238 (272)
367 PRK13632 cbiO cobalt transport 100.0 2.5E-32 5.4E-37 307.6 17.6 190 1-234 37-230 (271)
368 PRK00349 uvrA excinuclease ABC 100.0 3.8E-31 8.2E-36 334.3 30.2 109 116-233 466-583 (943)
369 PRK11701 phnK phosphonate C-P 100.0 9.6E-32 2.1E-36 301.2 22.1 201 692-915 6-222 (258)
370 PRK10619 histidine/lysine/argi 100.0 3.2E-32 6.9E-37 304.9 18.1 190 1-234 33-240 (257)
371 cd03225 ABC_cobalt_CbiO_domain 100.0 2.2E-32 4.8E-37 297.3 16.3 179 1-223 29-211 (211)
372 TIGR02769 nickel_nikE nickel i 100.0 3.5E-32 7.7E-37 305.6 18.5 192 1-234 39-239 (265)
373 PRK10584 putative ABC transpor 100.0 3.7E-32 8E-37 299.2 18.2 183 1-227 38-227 (228)
374 PRK13648 cbiO cobalt transport 100.0 5E-32 1.1E-36 305.0 19.6 190 1-234 37-230 (269)
375 TIGR03740 galliderm_ABC gallid 100.0 4.6E-32 9.9E-37 297.2 18.7 182 1-231 28-209 (223)
376 PRK14272 phosphate ABC transpo 100.0 1.4E-31 3E-36 299.4 23.0 203 692-916 4-218 (252)
377 PRK09700 D-allose transporter 100.0 5.1E-32 1.1E-36 333.2 21.4 204 692-916 5-216 (510)
378 TIGR03411 urea_trans_UrtD urea 100.0 3.8E-32 8.3E-37 301.9 18.3 196 1-233 30-229 (242)
379 PRK14254 phosphate ABC transpo 100.0 2E-31 4.4E-36 301.4 24.3 200 691-915 38-249 (285)
380 cd03299 ABC_ModC_like Archeal 100.0 4.6E-32 1E-36 299.2 18.6 191 1-234 27-218 (235)
381 PRK10418 nikD nickel transport 100.0 1.2E-31 2.6E-36 299.5 22.1 200 691-915 3-211 (254)
382 PRK13640 cbiO cobalt transport 100.0 2.4E-32 5.1E-37 309.2 16.6 193 1-234 35-231 (282)
383 PRK13633 cobalt transporter AT 100.0 3.5E-32 7.7E-37 307.7 18.0 190 1-234 38-232 (280)
384 PRK13548 hmuV hemin importer A 100.0 4.6E-32 9.9E-37 303.2 18.7 191 1-234 30-229 (258)
385 PRK14271 phosphate ABC transpo 100.0 1.4E-31 3.1E-36 301.6 22.7 206 692-916 21-233 (276)
386 PRK14249 phosphate ABC transpo 100.0 1.4E-31 3.1E-36 298.7 22.5 205 692-915 4-216 (251)
387 cd03235 ABC_Metallic_Cations A 100.0 2.3E-32 4.9E-37 297.6 15.6 185 1-228 27-213 (213)
388 PRK13644 cbiO cobalt transport 100.0 3.2E-32 6.9E-37 306.8 17.3 189 1-234 30-223 (274)
389 PRK14258 phosphate ABC transpo 100.0 1.7E-31 3.6E-36 299.4 23.0 207 692-916 7-222 (261)
390 PRK14275 phosphate ABC transpo 100.0 1.9E-31 4.1E-36 302.1 23.6 202 692-916 39-252 (286)
391 PRK14261 phosphate ABC transpo 100.0 1.4E-31 3.1E-36 299.1 22.3 201 692-915 6-218 (253)
392 PRK13638 cbiO cobalt transport 100.0 3.7E-32 8E-37 306.5 17.7 190 1-234 29-224 (271)
393 PRK14251 phosphate ABC transpo 100.0 1.5E-31 3.2E-36 298.8 22.4 202 692-916 4-217 (251)
394 PRK13649 cbiO cobalt transport 100.0 5.4E-32 1.2E-36 306.8 19.1 190 1-234 35-233 (280)
395 cd03229 ABC_Class3 This class 100.0 5E-32 1.1E-36 285.5 17.4 164 694-915 2-171 (178)
396 PRK14268 phosphate ABC transpo 100.0 4.5E-32 9.7E-37 303.7 18.1 195 1-234 40-241 (258)
397 PRK11174 cysteine/glutathione 100.0 2.3E-32 5.1E-37 342.9 17.6 192 1-235 378-572 (588)
398 TIGR02633 xylG D-xylose ABC tr 100.0 1E-31 2.2E-36 329.9 22.9 205 693-916 2-212 (500)
399 PRK14250 phosphate ABC transpo 100.0 4E-32 8.7E-37 300.8 17.3 186 1-234 31-220 (241)
400 PRK11288 araG L-arabinose tran 100.0 9.1E-32 2E-36 329.9 22.1 204 692-916 4-211 (501)
401 PRK11124 artP arginine transpo 100.0 3.6E-32 7.8E-37 302.0 16.8 189 1-233 30-228 (242)
402 COG4598 HisP ABC-type histidin 100.0 1E-32 2.2E-37 268.4 10.6 180 716-904 17-212 (256)
403 PRK14263 phosphate ABC transpo 100.0 2.1E-31 4.6E-36 297.9 22.7 204 691-915 7-218 (261)
404 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 1.4E-31 3.1E-36 292.6 20.8 180 716-915 33-212 (224)
405 PRK13639 cbiO cobalt transport 100.0 9.3E-32 2E-36 303.4 19.8 190 1-234 30-225 (275)
406 PRK14248 phosphate ABC transpo 100.0 1.7E-31 3.6E-36 300.9 21.8 202 692-916 21-234 (268)
407 PRK14257 phosphate ABC transpo 100.0 6.1E-32 1.3E-36 310.0 18.5 196 1-234 110-312 (329)
408 cd03267 ABC_NatA_like Similar 100.0 7.1E-32 1.5E-36 297.7 18.4 185 1-228 49-236 (236)
409 PRK15439 autoinducer 2 ABC tra 100.0 1E-31 2.2E-36 329.5 21.7 197 692-916 11-211 (510)
410 PRK13645 cbiO cobalt transport 100.0 4.1E-32 8.8E-37 308.9 16.8 191 1-234 39-239 (289)
411 COG4604 CeuD ABC-type enteroch 100.0 8.6E-33 1.9E-37 273.8 9.6 194 1-235 29-225 (252)
412 COG1123 ATPase components of v 100.0 5.9E-32 1.3E-36 315.0 18.3 193 1-234 319-518 (539)
413 PRK14273 phosphate ABC transpo 100.0 5.6E-32 1.2E-36 302.5 17.5 192 1-234 35-237 (254)
414 cd03300 ABC_PotA_N PotA is an 100.0 1E-31 2.2E-36 296.0 19.3 191 1-234 28-219 (232)
415 cd03233 ABC_PDR_domain1 The pl 100.0 7.4E-32 1.6E-36 289.9 17.6 163 1-228 35-202 (202)
416 PRK14247 phosphate ABC transpo 100.0 8E-32 1.7E-36 300.7 18.5 198 1-234 31-233 (250)
417 PRK14255 phosphate ABC transpo 100.0 2.9E-31 6.4E-36 296.5 23.0 201 692-915 5-217 (252)
418 PRK15093 antimicrobial peptide 100.0 6.8E-32 1.5E-36 311.3 18.3 202 1-234 35-247 (330)
419 PRK10419 nikE nickel transport 100.0 2E-31 4.4E-36 299.5 21.7 210 693-916 4-223 (268)
420 PRK14265 phosphate ABC transpo 100.0 2.9E-31 6.3E-36 298.9 22.8 201 691-916 19-231 (274)
421 cd03262 ABC_HisP_GlnQ_permease 100.0 4.5E-32 9.8E-37 295.4 15.5 180 1-224 28-213 (213)
422 PRK14267 phosphate ABC transpo 100.0 8.1E-32 1.8E-36 301.2 17.7 198 1-234 32-236 (253)
423 cd03245 ABCC_bacteriocin_expor 100.0 6.5E-32 1.4E-36 295.7 16.6 197 693-915 3-208 (220)
424 PRK11174 cysteine/glutathione 100.0 1.1E-31 2.4E-36 336.9 21.0 197 691-916 348-554 (588)
425 PRK14243 phosphate transporter 100.0 2.3E-31 5E-36 298.6 21.3 204 692-916 10-221 (264)
426 PRK15112 antimicrobial peptide 100.0 8.6E-32 1.9E-36 302.6 17.8 192 1-234 41-238 (267)
427 PRK14238 phosphate transporter 100.0 2.5E-31 5.3E-36 299.3 21.3 201 692-915 24-236 (271)
428 PRK10575 iron-hydroxamate tran 100.0 6.8E-32 1.5E-36 303.3 16.7 194 1-233 39-235 (265)
429 PRK10253 iron-enterobactin tra 100.0 7.7E-32 1.7E-36 302.8 17.1 195 1-234 35-232 (265)
430 PRK09984 phosphonate/organopho 100.0 8.1E-32 1.7E-36 302.5 17.2 201 1-233 32-240 (262)
431 PRK14242 phosphate transporter 100.0 8.7E-32 1.9E-36 301.0 17.4 192 1-233 34-235 (253)
432 PRK10982 galactose/methyl gala 100.0 1.3E-31 2.8E-36 328.0 20.5 190 718-915 11-204 (491)
433 TIGR00968 3a0106s01 sulfate AB 100.0 1.2E-31 2.7E-36 296.1 18.3 191 1-234 28-219 (237)
434 COG4987 CydC ABC-type transpor 100.0 3E-32 6.4E-37 309.4 13.5 198 692-916 336-543 (573)
435 CHL00131 ycf16 sulfate ABC tra 100.0 5.2E-31 1.1E-35 294.7 23.3 206 692-915 7-222 (252)
436 cd03215 ABC_Carb_Monos_II This 100.0 1.7E-31 3.6E-36 282.6 18.1 153 720-915 15-174 (182)
437 COG4604 CeuD ABC-type enteroch 100.0 1E-32 2.2E-37 273.2 8.2 182 716-905 12-197 (252)
438 TIGR02323 CP_lyasePhnK phospho 100.0 3.2E-31 7E-36 296.4 21.2 201 692-915 3-219 (253)
439 cd03252 ABCC_Hemolysin The ABC 100.0 5.2E-32 1.1E-36 299.9 14.5 195 694-915 2-206 (237)
440 PRK09544 znuC high-affinity zi 100.0 2.4E-31 5.1E-36 295.2 19.8 186 692-916 4-192 (251)
441 KOG0066 eIF2-interacting prote 100.0 1.4E-30 3.1E-35 283.5 25.0 177 690-905 584-762 (807)
442 PRK14235 phosphate transporter 100.0 1.3E-31 2.8E-36 301.1 17.6 197 1-234 47-250 (267)
443 cd03248 ABCC_TAP TAP, the Tran 100.0 6.5E-32 1.4E-36 296.8 14.5 204 691-915 10-218 (226)
444 PRK14241 phosphate transporter 100.0 1.6E-31 3.4E-36 299.5 17.8 197 1-234 32-241 (258)
445 PRK14266 phosphate ABC transpo 100.0 5.3E-31 1.1E-35 294.1 22.0 205 692-915 3-215 (250)
446 PRK14245 phosphate ABC transpo 100.0 1.5E-31 3.2E-36 298.4 17.4 195 1-234 31-233 (250)
447 PRK14246 phosphate ABC transpo 100.0 5.8E-31 1.3E-35 293.7 21.9 203 692-916 10-223 (257)
448 PRK14269 phosphate ABC transpo 100.0 1.9E-31 4.1E-36 296.7 17.7 194 1-234 30-229 (246)
449 PRK11231 fecE iron-dicitrate t 100.0 1.3E-31 2.7E-36 299.7 16.3 193 1-233 30-225 (255)
450 PRK09580 sufC cysteine desulfu 100.0 6.3E-31 1.4E-35 293.4 21.8 205 693-915 2-216 (248)
451 TIGR01978 sufC FeS assembly AT 100.0 2.6E-31 5.6E-36 295.7 18.6 196 1-233 28-232 (243)
452 TIGR03873 F420-0_ABC_ATP propo 100.0 1.8E-31 3.8E-36 298.7 17.3 193 1-233 29-224 (256)
453 PRK14264 phosphate ABC transpo 100.0 8.1E-31 1.8E-35 299.5 22.9 207 692-915 45-269 (305)
454 PRK14252 phosphate ABC transpo 100.0 1E-30 2.3E-35 293.8 23.4 203 691-916 15-231 (265)
455 PRK14270 phosphate ABC transpo 100.0 2.6E-31 5.6E-36 296.7 18.3 195 1-234 32-234 (251)
456 PRK03695 vitamin B12-transport 100.0 3.3E-31 7.2E-36 294.4 19.0 184 720-916 11-204 (248)
457 cd03254 ABCC_Glucan_exporter_l 100.0 9.8E-32 2.1E-36 296.1 14.5 197 692-915 2-207 (229)
458 PRK13642 cbiO cobalt transport 100.0 2.6E-31 5.6E-36 300.1 18.2 190 1-234 35-228 (277)
459 PRK11701 phnK phosphonate C-P 100.0 2.9E-31 6.3E-36 297.3 18.4 192 1-234 34-240 (258)
460 cd03246 ABCC_Protease_Secretio 100.0 2.2E-31 4.8E-36 279.2 16.3 161 694-915 2-165 (173)
461 PRK14274 phosphate ABC transpo 100.0 2.3E-31 5E-36 298.3 17.5 196 1-234 40-242 (259)
462 PRK10744 pstB phosphate transp 100.0 2.3E-31 5E-36 298.3 17.4 196 1-234 41-243 (260)
463 COG1129 MglA ABC-type sugar tr 100.0 4.2E-31 9E-36 306.1 19.9 204 691-915 7-215 (500)
464 PRK14256 phosphate ABC transpo 100.0 2.8E-31 6E-36 296.6 17.9 197 1-234 32-235 (252)
465 cd03251 ABCC_MsbA MsbA is an e 100.0 1.1E-31 2.4E-36 296.8 14.5 196 694-916 2-207 (234)
466 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.5E-31 3.2E-36 340.7 17.9 196 691-916 450-655 (686)
467 PRK10418 nikD nickel transport 100.0 4.2E-31 9E-36 295.2 19.2 189 1-234 31-229 (254)
468 TIGR03771 anch_rpt_ABC anchore 100.0 2.4E-31 5.1E-36 290.9 16.8 191 1-234 8-200 (223)
469 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.1E-31 2.5E-36 297.3 14.4 197 694-916 2-208 (238)
470 COG4161 ArtP ABC-type arginine 100.0 1.8E-31 4E-36 254.9 13.6 180 716-904 13-201 (242)
471 PRK03695 vitamin B12-transport 100.0 3.2E-31 7E-36 294.5 17.9 187 1-233 24-220 (248)
472 COG1132 MdlB ABC-type multidru 100.0 1.7E-31 3.7E-36 333.1 17.2 193 1-235 357-552 (567)
473 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.5E-31 7.5E-36 296.0 17.6 196 692-915 2-206 (275)
474 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.7E-31 3.6E-36 340.3 17.1 189 2-235 482-673 (686)
475 TIGR03269 met_CoM_red_A2 methy 100.0 8E-31 1.7E-35 323.4 22.4 201 694-916 2-240 (520)
476 PRK14239 phosphate transporter 100.0 3.7E-31 8.1E-36 295.9 17.7 196 1-234 33-235 (252)
477 PRK11160 cysteine/glutathione 100.0 2.3E-31 5E-36 331.1 17.7 199 691-916 337-544 (574)
478 PRK14244 phosphate ABC transpo 100.0 3.2E-31 6.8E-36 295.9 17.0 197 1-234 33-236 (251)
479 PRK11176 lipid transporter ATP 100.0 3.1E-31 6.7E-36 332.7 18.8 200 691-916 340-549 (582)
480 PRK14262 phosphate ABC transpo 100.0 4.1E-31 8.9E-36 295.0 17.7 196 1-234 31-233 (250)
481 TIGR00630 uvra excinuclease AB 100.0 1.4E-29 3E-34 319.5 33.6 103 123-233 470-581 (924)
482 PRK14237 phosphate transporter 100.0 4.8E-31 1E-35 296.5 18.3 196 1-234 48-250 (267)
483 PRK10790 putative multidrug tr 100.0 3.8E-31 8.3E-36 332.0 19.4 197 691-916 339-545 (592)
484 PRK14271 phosphate ABC transpo 100.0 5.7E-31 1.2E-35 296.7 18.7 196 1-234 49-250 (276)
485 PRK10261 glutathione transport 100.0 3.6E-31 7.9E-36 330.9 18.9 192 1-234 352-552 (623)
486 PRK14259 phosphate ABC transpo 100.0 3.8E-31 8.3E-36 297.4 17.0 191 1-234 41-252 (269)
487 COG4172 ABC-type uncharacteriz 100.0 4.4E-31 9.6E-36 287.5 16.8 191 2-234 316-515 (534)
488 PRK11176 lipid transporter ATP 100.0 2.1E-31 4.5E-36 334.3 16.4 193 2-235 372-567 (582)
489 PRK14240 phosphate transporter 100.0 5.3E-31 1.1E-35 294.1 17.7 196 1-234 31-233 (250)
490 COG1132 MdlB ABC-type multidru 100.0 1.9E-31 4.2E-36 332.6 15.5 199 690-916 326-534 (567)
491 PRK14263 phosphate ABC transpo 100.0 6.5E-31 1.4E-35 293.9 18.1 194 1-234 36-244 (261)
492 PRK13546 teichoic acids export 100.0 3.2E-30 6.9E-35 287.5 23.6 204 691-915 3-213 (264)
493 COG4136 ABC-type uncharacteriz 100.0 4.6E-31 1E-35 249.4 14.2 179 717-904 14-195 (213)
494 PRK14249 phosphate ABC transpo 100.0 6.7E-31 1.5E-35 293.3 18.1 196 1-234 32-234 (251)
495 PRK10790 putative multidrug tr 100.0 4.1E-31 8.9E-36 331.7 18.1 185 1-235 369-563 (592)
496 PRK14275 phosphate ABC transpo 100.0 6.7E-31 1.5E-35 297.6 18.0 189 1-234 67-269 (286)
497 cd03253 ABCC_ATM1_transporter 100.0 3.1E-31 6.8E-36 293.5 14.6 195 694-916 2-206 (236)
498 cd03217 ABC_FeS_Assembly ABC-t 100.0 1E-30 2.2E-35 280.8 18.0 170 694-916 2-176 (200)
499 COG4618 ArpD ABC-type protease 100.0 6.5E-31 1.4E-35 295.2 17.0 213 680-916 322-542 (580)
500 TIGR02857 CydD thiol reductant 100.0 4.3E-31 9.3E-36 327.3 17.2 198 691-915 319-526 (529)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-189 Score=1722.48 Aligned_cols=1181 Identities=54% Similarity=0.934 Sum_probs=1065.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
|+.++||+||||||||++|+|.++......|+|.+||++.++...++.++|++|+|.|+|.+||||+|.|+++|++++.+
T Consensus 143 m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r 222 (1391)
T KOG0065|consen 143 MTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSR 222 (1391)
T ss_pred eEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccc
Confidence 58899999999999999999999876666889999999998877788999999999999999999999999999998877
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
++ +..++++. ...+|.+++.+||++|+||+|||+..||+||||||||++|++++
T Consensus 223 ~~---~~~R~e~~-----------------------~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v 276 (1391)
T KOG0065|consen 223 YD---EVSRREKL-----------------------AAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLV 276 (1391)
T ss_pred cc---cccHHHHH-----------------------HHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeee
Confidence 76 22222221 12578899999999999999999999999999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHHHHhC
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESM 240 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~~~~~ 240 (1262)
++|+++++||+|+|||+.++.+++++|+++++..+.|.++.++|++++++++||+|++|.+|+++|+||.+++++||+++
T Consensus 277 ~~~~~~~~De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~ 356 (1391)
T KOG0065|consen 277 GPASILFWDEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDM 356 (1391)
T ss_pred cCcceeeeecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhc
Confidence 99999999999999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHhhhcCchhhhhhhhhcCCCCCcCCHHHHHHHHhchhhhHHHHHHhcCCCCCchhhHhhhhcccccc
Q 000838 241 GFKCPQRKGVADFLQEVTSKKDQQQYWAHKEIPYRFITVQEFAEAFKSFHVGQKLADELRIPFDKSQSHRAALAKKVYGV 320 (1262)
Q Consensus 241 g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1262)
||.||++++++||+.++++..++.+.|.....++...+..++.+.|.+++.+.++..+++.+.++.+.++.....+.|.+
T Consensus 357 Gf~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v 436 (1391)
T KOG0065|consen 357 GFKCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSV 436 (1391)
T ss_pred CccCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceec
Confidence 99999999999999999998888888888877888888899999999999999999999998888888888888899999
Q ss_pred cHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCcccCccchhhHHHHHHHHHHHHHHHHHHHh
Q 000838 321 GKRELLKACFSREFLLMKRNSFVYIFKLVQIAITALVTMTLFFRTKMKKDSVADGGVYAGVMFFAIVIVMFNGYAEISMT 400 (1262)
Q Consensus 321 ~~~~~~~~l~~r~~~~~~r~~~~~~~~~~~~~i~~l~~g~lf~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~ 400 (1262)
+.++|++.|+.|.+.+++||.++++...++.+++++++|++|+++.. ++..+...+.|.+|+++++.++++++++...
T Consensus 437 ~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~ 514 (1391)
T KOG0065|consen 437 PYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALT 514 (1391)
T ss_pred cHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999998763 4455677899999999999999999999999
Q ss_pred hhccceeeecccCCCCCchhHHHHHHHHHhhHHHHHHHHhhheeeeeeccccChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000838 401 IVKIPVFYKQRDLQFFPPWAYALPTWILKIPISFVEVVVWVFVSYYVIGYDPNAGRFFKQYFLLLAVNQMACALFRFIAA 480 (1262)
Q Consensus 401 ~~~~~v~~rer~~~~y~~~~~~l~~~l~~lp~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~i~~ 480 (1262)
++++|+++|||+..+|+||++.++.+++++|+.++.+.+|.+|.||++|+.+++++||.+++++++.++++.++++++++
T Consensus 515 ~~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~ 594 (1391)
T KOG0065|consen 515 FQRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIAS 594 (1391)
T ss_pred HhhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchHHHHHHHHHHHHHHHHHhccccCcCCcccchhhhhhhCHHHHHHHHHHHhhcCCCcccccC------------CC
Q 000838 481 TGRNMVVANTFGTVALLVLFALGGFLLSREDIKKWWIWGYWCSPLMYAQNAIVANEFLGHSWRKFT------------PD 548 (1262)
Q Consensus 481 ~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~~sp~~y~~~~~~~nef~~~~~~~~~------------~~ 548 (1262)
+++++.+|+.++++..++...++||+++..+||+||+|++|++|+.|++++++.|||++++|.|.. ..
T Consensus 595 l~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~ 674 (1391)
T KOG0065|consen 595 LSRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKV 674 (1391)
T ss_pred hcchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999872 11
Q ss_pred ---CCCcchHHHhhhcCcc-----CCCcchhHhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCcccc
Q 000838 549 ---SNEPLGVQVLKSRGFF-----PDAYWYWLGLGALFGFVLLLHIAFTLALTFLNRGYLYHLHFNYFKSKFDKPQAVIT 620 (1262)
Q Consensus 549 ---~~~~~g~~~L~~~~~~-----~~~~~~~~~~~~l~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (1262)
...+.|.++++..++. +...|+|+++|+++++.++|.+...+++.|.... +....++.
T Consensus 675 c~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~--------------~~~~~~l~ 740 (1391)
T KOG0065|consen 675 CAATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL--------------KKSGAILV 740 (1391)
T ss_pred chhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc--------------ccccceee
Confidence 2345678888877766 7788999999999999999999999999887642 12222221
Q ss_pred cccccchhhhcccccccccccCCCCCcccccCCCCCccCCCCCCcccchhcccCCCcccccCCCCCCCCCcEEEEeeeEE
Q 000838 621 EDSERDEQDTKIRGTVELSTLGSSSSLTTRSESGGDIWGRNSSSQSLSMTEAAGGVIQPKKRGMVLPFEPHSLIFDEVTY 700 (1262)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (1262)
.+...+.......+. +.. . +........++.++..|..+..+.++|+.+
T Consensus 741 ~~~~~~~~~~~~~~~--------~~~--------------------~---~~~~~s~~~~~~~~~~~~~~~~~~~~~V~~ 789 (1391)
T KOG0065|consen 741 FKKGKEKKKVKSAGS--------SSE--------------------I---EKLDDSSHQEKNKMVLPFTPLSLTFKDVFY 789 (1391)
T ss_pred eccchhhhcchhccc--------ccc--------------------c---cccccccccccccccCCCccccccccceEE
Confidence 111111100000000 000 0 000000011234455666667777888887
Q ss_pred EEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceE
Q 000838 701 SVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHETFARIS 780 (1262)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~ 780 (1262)
.++++-..+.+| +++++|+|||+.++||.++||||+|||||||||++|+||...|.++|+|++||.|.+.+.++|.+
T Consensus 790 w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~ 866 (1391)
T KOG0065|consen 790 WVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVS 866 (1391)
T ss_pred EEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhcccc
Confidence 777776665555 57889999999999999999999999999999999999998889999999999998878899999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh
Q 000838 781 GYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELV 860 (1262)
Q Consensus 781 ~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~ 860 (1262)
|||.|+|.|.|.+||+|.|.|++.+|.+.+.+.+++.++||++++.++|++++|.+||.++ +|||.+||||++||.+|+
T Consensus 867 GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELv 945 (1391)
T KOG0065|consen 867 GYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELV 945 (1391)
T ss_pred ceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred hCC-CCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh------------------------
Q 000838 861 ANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA------------------------ 915 (1262)
Q Consensus 861 ~~p-~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~------------------------ 915 (1262)
.|| .||+|||||||||+.++..|++.+|++++.|+||+||+||||.+||+.||+.
T Consensus 946 A~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~ 1025 (1391)
T KOG0065|consen 946 ANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIE 1025 (1391)
T ss_pred cCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHH
Confidence 999 8999999999999999999999999999999999999999999999999991
Q ss_pred ----cCCcccCCCCCCchhhHHHhcchhhhhhccccHHHHHHhhHHHHhhHHHHhhhcCCCCC-CCCCCCCCccCCchHH
Q 000838 916 ----IPGIEKIKNGYNPATWMLEVTAASQEVALGVDFTDIFKRSELYRGNKALIEDLSKPTPG-SKDLYFPTQYSQSAFT 990 (1262)
Q Consensus 916 ----~~~~~~~~~~~npad~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 990 (1262)
+++. .|++..|||||+||+++...+.....||++.|++|++|+++++++++++++.++ ..+..++++|++|+|.
T Consensus 1026 YFes~~~~-~~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~ 1104 (1391)
T KOG0065|consen 1026 YFESIGGV-KCISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWY 1104 (1391)
T ss_pred HHHhcCCc-cCCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHH
Confidence 1222 577777999999999998877777889999999999999999999999988877 6667778889999999
Q ss_pred HHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHhhccCCCCCCChhhHHHhHhHHHHHHHHHHHhhhhhhhhhhHhh
Q 000838 991 QFIACLWKQHWSYWRNPPYTAVRFFFTTLISLMFGTLFWDLGTKTGKNQDLFNAMGSMYIAVLFIGVQYCFSVQPIVSVE 1070 (1262)
Q Consensus 991 q~~~l~~R~~~~~~r~~~~~~~~~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~ 1070 (1262)
|++.+++|+++.+||+|.|+++|++..++.||++|+.||++|+ +++|+++.+|++|.++++.+..++..+.+.+..|
T Consensus 1105 Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e 1181 (1391)
T KOG0065|consen 1105 QFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATE 1181 (1391)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhh
Confidence 9999999999999999999999999999999999999999984 6899999999999999999888777677777889
Q ss_pred hhHHHhhccCCCCChHHHHHHHHHHHHHHHHHHHhhHhhhhhcccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000838 1071 RTIFYRESAAGMYSGQPWALAQAAIEIPYIFIQSSLYGVLVYAMIGFDWTAAKFFWYIFFMFFTLLYFTFYGMMAVAMTP 1150 (1262)
Q Consensus 1071 r~v~~re~~~~~Y~~~~~~~a~~l~~~P~~~~~~~~f~~~~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 1150 (1262)
|.+++||+.+|+||+.+|++|++++|+|+.++++++|.+++|+++||.+++.+|++|++.+++..++.+++|+|+.+++|
T Consensus 1182 ~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tP 1261 (1391)
T KOG0065|consen 1182 RLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTP 1261 (1391)
T ss_pred hhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhhccCCCCCCcchhhHHHHhhCHHHHHHHHHHHHhhCCCcccc----------CCCCcHHHH
Q 000838 1151 NHHIAAIVSTLFFGLWNVFTGFLIPRPRIPIWWRWYYWADPMAWTLYGLVVSQFGDLEDKL----------ESGETVKQF 1220 (1262)
Q Consensus 1151 ~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~nef~~~~~~~----------~~g~~~~~~ 1220 (1262)
|.++|+.+.+.+++++.+|||+++|++.||.||+|+||+||+.|.+++++..++||.+..| |+|.|+++|
T Consensus 1262 n~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~ 1341 (1391)
T KOG0065|consen 1262 NLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEF 1341 (1391)
T ss_pred ChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999887 246799999
Q ss_pred HHhhcC----CcccchhHHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 000838 1221 LRSYFG----YKHDFLGVVAVVVAGFAAVFGFLFALGIKQFNFQRR 1262 (1262)
Q Consensus 1221 ~~~~~~----~~~~~~~~~~~il~~~~~~~~~~~~~~l~~~~~~~r 1262 (1262)
+.+.+| |.++..-....+.++|.+++.++..+..+|.+++||
T Consensus 1342 m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1342 MEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred HHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 999999 766655555566778999999999999999999986
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.3e-185 Score=1820.80 Aligned_cols=1243 Identities=62% Similarity=1.086 Sum_probs=1052.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
+++|+|||||||||||++|+|+++|+.+++|+|.+||+++.+...++.++||+|+|.+++.+||+|||.|++++++.+.+
T Consensus 193 ~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~ 272 (1470)
T PLN03140 193 MTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTR 272 (1470)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCc
Confidence 58999999999999999999999886677999999999987655567899999999999999999999999998876555
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
+++..+..++++..+..++.+.+.+++....++.+.+..++.+++.+||++++||.||++.+++|||||||||+||++|+
T Consensus 273 ~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~ 352 (1470)
T PLN03140 273 YDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIV 352 (1470)
T ss_pred ccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhc
Confidence 44433444444444444444444444444444455566788999999999999999999999999999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHHHHhC
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESM 240 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~~~~~ 240 (1262)
++|+++||||||+|||+.++.++++.|+++++..++|+|+++||+.++++++||+|++|++|+++|+||.+++.+||+++
T Consensus 353 ~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~l 432 (1470)
T PLN03140 353 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESC 432 (1470)
T ss_pred CCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHc
Confidence 99999999999999999999999999999877567788888888899999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHhhhcCchhhhhhhhhcCCCCCcCCHHHHHHHHhchhhhHHHHHHhcCCCCCchhhHhhhhcccccc
Q 000838 241 GFKCPQRKGVADFLQEVTSKKDQQQYWAHKEIPYRFITVQEFAEAFKSFHVGQKLADELRIPFDKSQSHRAALAKKVYGV 320 (1262)
Q Consensus 241 g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1262)
||.||++.+++||+.++.+..+++++|.....|+...++++++++|+++..+++..++++.+.++.+.++.......|..
T Consensus 433 Gf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 512 (1470)
T PLN03140 433 GFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSV 512 (1470)
T ss_pred CCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcC
Confidence 99999999999999999998766666655555656678899999999998877776665544433322333334456889
Q ss_pred cHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCcccCccchhhHHHHHHHHHHHHHHHHHHHh
Q 000838 321 GKRELLKACFSREFLLMKRNSFVYIFKLVQIAITALVTMTLFFRTKMKKDSVADGGVYAGVMFFAIVIVMFNGYAEISMT 400 (1262)
Q Consensus 321 ~~~~~~~~l~~r~~~~~~r~~~~~~~~~~~~~i~~l~~g~lf~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~ 400 (1262)
++++|++.+++|.++..+||+..++.++++.+++|+++|++||+.+.+.....+...+.|.+|+++++.+++++.++..+
T Consensus 513 s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~ 592 (1470)
T PLN03140 513 PKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELALM 592 (1470)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998765444344556778999999888888999999999
Q ss_pred hhccceeeecccCCCCCchhHHHHHHHHHhhHHHHHHHHhhheeeeeeccccChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000838 401 IVKIPVFYKQRDLQFFPPWAYALPTWILKIPISFVEVVVWVFVSYYVIGYDPNAGRFFKQYFLLLAVNQMACALFRFIAA 480 (1262)
Q Consensus 401 ~~~~~v~~rer~~~~y~~~~~~l~~~l~~lp~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~i~~ 480 (1262)
+.+||+|+|||+.++|++++|++++++.++|+.++.+++|++|+|||+|+++++++|+.|++++++..+++.++++++++
T Consensus 593 ~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a 672 (1470)
T PLN03140 593 IQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIAS 672 (1470)
T ss_pred HhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchHHHHHHHHHHHHHHHHHhccccCcCCcccchhhhhhhCHHHHHHHHHHHhhcCCCccccc-CCCCCCcchHHHhh
Q 000838 481 TGRNMVVANTFGTVALLVLFALGGFLLSREDIKKWWIWGYWCSPLMYAQNAIVANEFLGHSWRKF-TPDSNEPLGVQVLK 559 (1262)
Q Consensus 481 ~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~~sp~~y~~~~~~~nef~~~~~~~~-~~~~~~~~g~~~L~ 559 (1262)
+++++.+|+.+++++.+++++++||+++.++||+||+|++|+||+.|++++++.|||.+..|.+. +.+.....|..+|+
T Consensus 673 ~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~ 752 (1470)
T PLN03140 673 VCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLN 752 (1470)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988776532 23345678999999
Q ss_pred hcCccCCCcchhHhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCcccccccccchhhhccccccccc
Q 000838 560 SRGFFPDAYWYWLGLGALFGFVLLLHIAFTLALTFLNRGYLYHLHFNYFKSKFDKPQAVITEDSERDEQDTKIRGTVELS 639 (1262)
Q Consensus 560 ~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (1262)
.+++.....|+|++++++++++++|.++.+++|.+....... .....++............... .
T Consensus 753 ~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~-~ 817 (1470)
T PLN03140 753 IFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKK--------------QAIISEETAEEMEGEEDSIPRS-L 817 (1470)
T ss_pred hcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCC--------------Cccccccchhhhhccccccccc-c
Confidence 999988888999999999999999999999999887632110 0110000000000000000000 0
Q ss_pred ccCCCCCcccccCCCCCccCCCCCCcccchhcc-cCCCcccccCCCCCCCCCcEEEEeeeEEEEecchhhhhccccCCce
Q 000838 640 TLGSSSSLTTRSESGGDIWGRNSSSQSLSMTEA-AGGVIQPKKRGMVLPFEPHSLIFDEVTYSVDMPQEMKLQGVLEDKL 718 (1262)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 718 (1262)
+........ ..+ .. -+............. ........+.++..|.++..+.|+|++|.++.+...+..+..++++
T Consensus 818 ~~~~~~~~~-~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~ 893 (1470)
T PLN03140 818 SSADGNNTR-EVA-IQ--RMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRL 893 (1470)
T ss_pred ccccccccc-ccc-cc--ccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCc
Confidence 000000000 000 00 000000000000000 0000011223445677888999999999998765543333344566
Q ss_pred EEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEecCCCCCCCCCCHHHH
Q 000838 719 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHETFARISGYCEQNDIHSPFVTVHES 798 (1262)
Q Consensus 719 ~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~ 798 (1262)
.+|+|||++++|||+++|+|||||||||||++|+|+.+++..+|+|.+||.+.+...+++.+|||+|+|.+++.+||+|+
T Consensus 894 ~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~ 973 (1470)
T PLN03140 894 QLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRES 973 (1470)
T ss_pred eEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHH
Confidence 89999999999999999999999999999999999877666789999999886544566789999999999999999999
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHH
Q 000838 799 LAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 878 (1262)
Q Consensus 799 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~ 878 (1262)
+.|++.++.+...+.++++++++++++.+||.+++|+.+|.+.+++|||||||||+||++|+.+|+||||||||+|||+.
T Consensus 974 L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~ 1053 (1470)
T PLN03140 974 LIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1053 (1470)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Confidence 99998887655556666677899999999999999999998877899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc----------------------------CCcccCCCCCCchh
Q 000838 879 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI----------------------------PGIEKIKNGYNPAT 930 (1262)
Q Consensus 879 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~----------------------------~~~~~~~~~~npad 930 (1262)
++..+++.|++++++|+|||+++|||+.++++.||+.+ .+.+.||+++||||
T Consensus 1054 ~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd 1133 (1470)
T PLN03140 1054 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPAT 1133 (1470)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchh
Confidence 99999999999998899999999999999999999821 12335899999999
Q ss_pred hHHHhcchhhhhhccccHHHHHHhhHHHHhhHHHHhhhcCCCCCCCCCCCCCccCCchHHHHHHHHHHHHHHHhcChhhH
Q 000838 931 WMLEVTAASQEVALGVDFTDIFKRSELYRGNKALIEDLSKPTPGSKDLYFPTQYSQSAFTQFIACLWKQHWSYWRNPPYT 1010 (1262)
Q Consensus 931 ~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~r~~~~~ 1010 (1262)
|++|+++.+.+.....||++.|++|++++++++.++++..+.++.....+.++|+.|+++|+++|++|+++++||||.++
T Consensus 1134 ~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~ 1213 (1470)
T PLN03140 1134 WMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYN 1213 (1470)
T ss_pred hhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHH
Confidence 99999876655455578999999999999888777776655444443344567899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCChhhHHHhHhHHHHHHHHHHHhhhhhhhhhhHhhhhHHHhhccCCCCChHHHHH
Q 000838 1011 AVRFFFTTLISLMFGTLFWDLGTKTGKNQDLFNAMGSMYIAVLFIGVQYCFSVQPIVSVERTIFYRESAAGMYSGQPWAL 1090 (1262)
Q Consensus 1011 ~~~~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~r~v~~re~~~~~Y~~~~~~~ 1090 (1262)
++|+++.+++|+++|++||+++++..+++++++++|++|++++++++.++.+++|.+..||+||+||+++|+|++++|++
T Consensus 1214 ~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~l 1293 (1470)
T PLN03140 1214 LVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAI 1293 (1470)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHH
Confidence 99999999999999999999998766778999999999999999999888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHhhhhhcccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhh
Q 000838 1091 AQAAIEIPYIFIQSSLYGVLVYAMIGFDWTAAKFFWYIFFMFFTLLYFTFYGMMAVAMTPNHHIAAIVSTLFFGLWNVFT 1170 (1262)
Q Consensus 1091 a~~l~~~P~~~~~~~~f~~~~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~ 1170 (1262)
|++++|+|+.++.+++|++|+|||+||++++.+||+|+++++++.++++++|+++++++||.++|..+++++++++++|+
T Consensus 1294 a~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~ 1373 (1470)
T PLN03140 1294 AQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFS 1373 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcchhhHHHHhhCHHHHHHHHHHHHhhCCCccccC-C----CCcHHHHHHhhcCCcccchhHHHHHHHHHHHH
Q 000838 1171 GFLIPRPRIPIWWRWYYWADPMAWTLYGLVVSQFGDLEDKLE-S----GETVKQFLRSYFGYKHDFLGVVAVVVAGFAAV 1245 (1262)
Q Consensus 1171 G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~nef~~~~~~~~-~----g~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 1245 (1262)
||++|+++||+||+|+||+||++|+++|+++|||+|.+..|+ + +.++++|+++.|||+++++|++++|+++|+++
T Consensus 1374 Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~ 1453 (1470)
T PLN03140 1374 GFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVF 1453 (1470)
T ss_pred eeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHH
Confidence 999999999999999999999999999999999999887653 2 36789999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccCC
Q 000838 1246 FGFLFALGIKQFNFQRR 1262 (1262)
Q Consensus 1246 ~~~~~~~~l~~~~~~~r 1262 (1262)
|+++++++++++|||||
T Consensus 1454 f~~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1454 FAFIFAFCIRTLNFQTR 1470 (1470)
T ss_pred HHHHHHHHHHHhhcccC
Confidence 99999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.5e-165 Score=1637.40 Aligned_cols=1180 Identities=31% Similarity=0.530 Sum_probs=959.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC-CceeEEEEECCccCCCC--cccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSS-LKVSGRVTYNGHNMGEF--VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~-~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+||||||||||||+|+|+.++. ...+|+|.+||.++.+. ..++.++||+|+|.+++.+||+|||.|+++++.+
T Consensus 89 ~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~ 168 (1394)
T TIGR00956 89 LTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTP 168 (1394)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCC
Confidence 58999999999999999999997421 12499999999987532 2345699999999999999999999999877632
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccc-hhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQE-ANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
....+.. ..++ .++.++.+++.+||++++||.||++.+++|||||||||+||
T Consensus 169 ~~~~~~~---------------------------~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA 221 (1394)
T TIGR00956 169 QNRPDGV---------------------------SREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIA 221 (1394)
T ss_pred CCCCCCC---------------------------CHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHH
Confidence 1100000 0001 12234678999999999999999999999999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEF 236 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~ 236 (1262)
++|+.+|+|++|||||+|||+.++.++++.|+++++..++++|+++||+++++.++||++++|++|+++++|+++++.+|
T Consensus 222 ~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~y 301 (1394)
T TIGR00956 222 EASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQY 301 (1394)
T ss_pred HHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHH
Confidence 99999999999999999999999999999999987655778888888888999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCChhhHHhhhcCchhhhhhhhhcCCCCCcCCHHHHHHHHhchhhhHHHHHHhcCCCCCc---hh-----
Q 000838 237 FESMGFKCPQRKGVADFLQEVTSKKDQQQYWAHKEIPYRFITVQEFAEAFKSFHVGQKLADELRIPFDKS---QS----- 308 (1262)
Q Consensus 237 ~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----- 308 (1262)
|+++|+.||++.+++||+.++.++.++.. +...+. ....+.+++++.|+++..+++..++++...++. ..
T Consensus 302 F~~lG~~~p~~~n~aDfl~~~~~~~~~~~-~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (1394)
T TIGR00956 302 FEKMGFKCPDRQTTADFLTSLTSPAERQI-KPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYR 379 (1394)
T ss_pred HHHcCCCCCCCCChHHHHHhccChhhhhc-cccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHH
Confidence 99999999999999999999987654321 111011 122567899999999887666555443221110 00
Q ss_pred --hH-----hhhhcccccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCcccCccchhhH
Q 000838 309 --HR-----AALAKKVYGVGKRELLKACFSREFLLMKRNSFVYIFKLVQIAITALVTMTLFFRTKMKKDSVADGGVYAGV 381 (1262)
Q Consensus 309 --~~-----~~~~~~~~~~~~~~~~~~l~~r~~~~~~r~~~~~~~~~~~~~i~~l~~g~lf~~~~~~~~~~~~~~~~~g~ 381 (1262)
.. .......+..++++|++.+++|.++..+||+..+..++++.+++++++|++||+.+.+ ..+.+.+.|+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~---~~~~~~r~g~ 456 (1394)
T TIGR00956 380 ESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKN---TSDFYSRGGA 456 (1394)
T ss_pred HHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---chhHHHHHHH
Confidence 00 0112345778999999999999999999999999999999999999999999976543 2346678999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccceeeecccCCCCCchhHHHHHHHHHhhHHHHHHHHhhheeeeeeccccChhhHHHHH
Q 000838 382 MFFAIVIVMFNGYAEISMTIVKIPVFYKQRDLQFFPPWAYALPTWILKIPISFVEVVVWVFVSYYVIGYDPNAGRFFKQY 461 (1262)
Q Consensus 382 lf~~~~~~~~~~~~~~~~~~~~~~v~~rer~~~~y~~~~~~l~~~l~~lp~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~ 461 (1262)
+|+++.+..+.++..+...+.+|++++|||..++|++++|++++.++++|+.++.+++|.+|+|||+|+++++++|+.++
T Consensus 457 lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~ 536 (1394)
T TIGR00956 457 LFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYL 536 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHH
Confidence 99999998888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccCcCCcccchhhhhhhCHHHHHHHHHHHhhcCCCc
Q 000838 462 FLLLAVNQMACALFRFIAATGRNMVVANTFGTVALLVLFALGGFLLSREDIKKWWIWGYWCSPLMYAQNAIVANEFLGHS 541 (1262)
Q Consensus 462 ~~~~~~~~~~~~~~~~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~~sp~~y~~~~~~~nef~~~~ 541 (1262)
+++++..+++.++++++++++++..+|+.+++++.+++++++||+++..+||+||+|++|+||+.|++++++.|||.+..
T Consensus 537 l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~ 616 (1394)
T TIGR00956 537 LILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRR 616 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccC--C----------------------CCCCcchHHHhhhcCccCCCcchhHhHHHHHHHHHHHHHHHHHHHHhhcc
Q 000838 542 WRKFT--P----------------------DSNEPLGVQVLKSRGFFPDAYWYWLGLGALFGFVLLLHIAFTLALTFLNR 597 (1262)
Q Consensus 542 ~~~~~--~----------------------~~~~~~g~~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~l~~~~~ 597 (1262)
+.|.. | +.....|.++|+. .+.....|.|++++++++++++|.++.++++.+...
T Consensus 617 ~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 617 FECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 87741 1 1123478899985 444456789999999999999999999999988763
Q ss_pred cccccccccccccCCCCCCcccccccccchhhhcccccccccccCCCCCcccccCCCCCccCCCCCCcccchhcccCCCc
Q 000838 598 GYLYHLHFNYFKSKFDKPQAVITEDSERDEQDTKIRGTVELSTLGSSSSLTTRSESGGDIWGRNSSSQSLSMTEAAGGVI 677 (1262)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (1262)
....+....+.+. ..+.......+.+.+....++...+.. ... .. + .....
T Consensus 696 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~~~~~~----~~~----------------~~-----~-~~~~~ 746 (1394)
T TIGR00956 696 AKQKGEILVFRRG---SLKRAKKAGETSASNKNDIEAGEVLGS----TDL----------------TD-----E-SDDVN 746 (1394)
T ss_pred cCCCCceEeeccc---cccchhhcccccccccccccccccCCC----Ccc----------------cc-----c-ccccc
Confidence 2111110000000 000000000000000000000000000 000 00 0 00000
Q ss_pred ccccCCCCCCCCCcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC
Q 000838 678 QPKKRGMVLPFEPHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG 757 (1262)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~ 757 (1262)
.......+.....+.|+|++++++.. ++++.+|+|||++++|||++||+|||||||||||++|+|+.++
T Consensus 747 --~~~~~~~~~~~~~l~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~ 815 (1394)
T TIGR00956 747 --DEKDMEKESGEDIFHWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTT 815 (1394)
T ss_pred --ccccccccCCCceEEEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 00000000112357899999987532 1346799999999999999999999999999999999998764
Q ss_pred C-eeEEEEEECCccCCcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccccccc
Q 000838 758 G-YITGSIKISGYPKKHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSL 836 (1262)
Q Consensus 758 ~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~ 836 (1262)
+ +.+|+|.+||.+... .+++.+|||+|+|.+++.+||+|++.|++.++.+...+.++++++++++++.++|.+++|+.
T Consensus 816 g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~ 894 (1394)
T TIGR00956 816 GVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAV 894 (1394)
T ss_pred CCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCe
Confidence 3 457999999998743 46778999999999999999999999998888665556666777899999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCC-CcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 837 VGLPGVNGLSTEQRKRLTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 837 ~~~~~~~~lSgGqrqrl~ia~al~~~p~-illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+|.++ .+||||||||++||+||+.+|+ ||+|||||+|||+.++..+++.|++++++|+|||+++|||+..+++.||+.
T Consensus 895 v~~~~-~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~v 973 (1394)
T TIGR00956 895 VGVPG-EGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRL 973 (1394)
T ss_pred eCCCC-CCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEE
Confidence 88653 3899999999999999999997 999999999999999999999999998889999999999998889999982
Q ss_pred c---------------------------CCcccCCCCCCchhhHHHhcchhhhhhccccHHHHHHhhHHHHhhHHHHhhh
Q 000838 916 I---------------------------PGIEKIKNGYNPATWMLEVTAASQEVALGVDFTDIFKRSELYRGNKALIEDL 968 (1262)
Q Consensus 916 ~---------------------------~~~~~~~~~~npad~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 968 (1262)
+ .|.+.||+++|||||++|+++.+.+.....++.+.|+.|+++++..+.++..
T Consensus 974 l~L~~GG~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 1053 (1394)
T TIGR00956 974 LLLQKGGQTVYFGDLGENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRL 1053 (1394)
T ss_pred EEEcCCCEEEEECCcccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHh
Confidence 1 1223699999999999999876544334468999999999988776655544
Q ss_pred cCCCCCC---CCCCCCCccCCchHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHhhccCCCCCCChhhHHHhH
Q 000838 969 SKPTPGS---KDLYFPTQYSQSAFTQFIACLWKQHWSYWRNPPYTAVRFFFTTLISLMFGTLFWDLGTKTGKNQDLFNAM 1045 (1262)
Q Consensus 969 ~~~~~~~---~~~~~~~~~~~~~~~q~~~l~~R~~~~~~r~~~~~~~~~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~ 1045 (1262)
..+.... .......+++.|+++|+++|++|+++++||||.++++|+++++++|+++|++||++++ +++++++|+
T Consensus 1054 ~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~ 1130 (1394)
T TIGR00956 1054 EAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQM 1130 (1394)
T ss_pred hcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHH
Confidence 3221111 1111124688999999999999999999999999999999999999999999999975 478999999
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHhhhhHH-HhhccCCCCChHHHHHHHHHHHHHHHHHHHhhHhhhhhcccccccChhH-
Q 000838 1046 GSMYIAVLFIGVQYCFSVQPIVSVERTIF-YRESAAGMYSGQPWALAQAAIEIPYIFIQSSLYGVLVYAMIGFDWTAAK- 1123 (1262)
Q Consensus 1046 g~lf~~~~~~~~~~~~~~~~~~~~~r~v~-~re~~~~~Y~~~~~~~a~~l~~~P~~~~~~~~f~~~~Y~~~gl~~~~~~- 1123 (1262)
|++|+++++.++. +..++|.++.+|.+| +||+.+|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++..
T Consensus 1131 g~~f~~~~~~~~~-~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~ 1209 (1394)
T TIGR00956 1131 FAVFMATVLFNPL-IQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKT 1209 (1394)
T ss_pred HHHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCccccc
Confidence 9999988877765 345567788888886 8999999999999999999999999999999999999999999988766
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhhccCCCCCCcchhhHHHHhhCHHHHHHH
Q 000838 1124 ------FFWYIFFMFFTLLYFTFYGMMAVAMTPNHHIAAIVSTLFFGLWNVFTGFLIPRPRIPIWWRWYYWADPMAWTLY 1197 (1262)
Q Consensus 1124 ------f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~ 1197 (1262)
|++|++++++..++++++|+++++++||.++|+.+++++++++++|+||++|+++||+||+|++|+||++|+++
T Consensus 1210 ~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~ 1289 (1394)
T TIGR00956 1210 GQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQ 1289 (1394)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCccccC----------CCCcHH--------------------------------HHHHhhcCCcccchhHH
Q 000838 1198 GLVVSQFGDLEDKLE----------SGETVK--------------------------------QFLRSYFGYKHDFLGVV 1235 (1262)
Q Consensus 1198 ~l~~nef~~~~~~~~----------~g~~~~--------------------------------~~~~~~~~~~~~~~~~~ 1235 (1262)
|++.|||++.+..|+ +|.+|+ +|+. .+|++.+++|+|
T Consensus 1290 ~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~-~~~~~~~~~w~~ 1368 (1394)
T TIGR00956 1290 ALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLE-PISSKYSGRWRN 1368 (1394)
T ss_pred HHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHH-HcCCcccccccc
Confidence 999999999887662 244444 3433 568889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccC
Q 000838 1236 AVVVAGFAAVFGFLFALGIKQFNFQR 1261 (1262)
Q Consensus 1236 ~~il~~~~~~~~~~~~~~l~~~~~~~ 1261 (1262)
++|+++|++++ +++++++.|....+
T Consensus 1369 ~~i~~~~~~~~-~~~~~~l~~~~r~~ 1393 (1394)
T TIGR00956 1369 FGIFIAFIFFN-IIATVFFYWLARVP 1393 (1394)
T ss_pred hhhhhHHHHHH-HHHHHhhheEEEcC
Confidence 99999999988 88888888875544
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-89 Score=839.80 Aligned_cols=559 Identities=32% Similarity=0.562 Sum_probs=482.0
Q ss_pred CCcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEEC
Q 000838 689 EPHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSIKIS 767 (1262)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~~~ 767 (1262)
.+..+.|+|+++....+.. ..+++|+|||++++|||++||||||||||||||++|+|+..++ ..+|+|++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3567889999988764321 3578999999999999999999999999999999999998763 689999999
Q ss_pred CccCCcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 768 GYPKKHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 768 g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
|++...+.+++.+|||.|+|.++|.+||+|++.|++.+|.+...+.++++++|+++++.+||.+++|+.+|+...+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98877778899999999999999999999999999999999888889999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc-----------
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI----------- 916 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~----------- 916 (1262)
||||||+||.+|++||+||++||||||||+.++.++++.|++++++|+|||+++|||+.++|++||+.+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G 253 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSEGEVVYSG 253 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999932
Q ss_pred -----------CCcccCCCCCCchhhHHHhcchhhhhhccccHHHHHHhhHHHH--hh-HHHHhhhcCCCCCCCCCCCCC
Q 000838 917 -----------PGIEKIKNGYNPATWMLEVTAASQEVALGVDFTDIFKRSELYR--GN-KALIEDLSKPTPGSKDLYFPT 982 (1262)
Q Consensus 917 -----------~~~~~~~~~~npad~~l~~~~~~~~~~~~~~~~~~~~~s~~~~--~~-~~~~~~~~~~~~~~~~~~~~~ 982 (1262)
.|. +||+..|||||++|+.+.+.......+..+.++....++ +. .+.............. .+.
T Consensus 254 ~~~~~~~ff~~~G~-~~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 330 (613)
T KOG0061|consen 254 SPRELLEFFSSLGF-PCPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTSKK--VEI 330 (613)
T ss_pred CHHHHHHHHHhCCC-CCCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHHHHhhhcccccc--ccc
Confidence 122 599999999999999884310000111112222111111 00 0000000100000011 111
Q ss_pred ccCCchHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHhhccCCCCCCChhhHHHhHhHHHHHHHHHHHhhhhh
Q 000838 983 QYSQSAFTQFIACLWKQHWSYWRNPPYTAVRFFFTTLISLMFGTLFWDLGTKTGKNQDLFNAMGSMYIAVLFIGVQYCFS 1062 (1262)
Q Consensus 983 ~~~~~~~~q~~~l~~R~~~~~~r~~~~~~~~~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~ 1062 (1262)
....+||.|++.|++|.+++.+|||.+...|+++.+++|+++|++||+++. +..++++|.|++||.+.+..+..+..
T Consensus 331 ~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~~~~~~f~~~~~ 407 (613)
T KOG0061|consen 331 GTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFILSFMTFLSMFG 407 (613)
T ss_pred ccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 126899999999999999999999999999999999999999999999965 45677899999999999998888888
Q ss_pred hhhhhHhhhhHHHhhccCCCCChHHHHHHHHHHHHHHHHHHHhhHhhhhhcccccccChhHHHHHHHHHHHHHHHHHHHH
Q 000838 1063 VQPIVSVERTIFYRESAAGMYSGQPWALAQAAIEIPYIFIQSSLYGVLVYAMIGFDWTAAKFFWYIFFMFFTLLYFTFYG 1142 (1262)
Q Consensus 1063 ~~~~~~~~r~v~~re~~~~~Y~~~~~~~a~~l~~~P~~~~~~~~f~~~~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~ 1142 (1262)
.++.|+.||++|.||+.+|+|+.++|++|+.++++|+.++.+++|.+|+|||+|++++..+|++|++++++..+++++++
T Consensus 408 ~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~ 487 (613)
T KOG0061|consen 408 AVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLG 487 (613)
T ss_pred HHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHhhccCCCCCCcchhhHHHHhhCHHHHHHHHHHHHhhCCCccccC-C-----CCc
Q 000838 1143 MMAVAMTPNHHIAAIVSTLFFGLWNVFTGFLIPRPRIPIWWRWYYWADPMAWTLYGLVVSQFGDLEDKLE-S-----GET 1216 (1262)
Q Consensus 1143 ~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~nef~~~~~~~~-~-----g~~ 1216 (1262)
.+++++.||...|..+++++++++++|+||+++.++||+||+|++|+|+++|++||+++|||.+....|. . ..+
T Consensus 488 ~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~ 567 (613)
T KOG0061|consen 488 LFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCEST 567 (613)
T ss_pred HHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999987333331 1 124
Q ss_pred HHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 000838 1217 VKQFLRSYFGYKHDFLGVVAVVVAGFAAVFGFLFALGIKQFNFQRR 1262 (1262)
Q Consensus 1217 ~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~l~~~~~~~r 1262 (1262)
+.+++ ...++...+.|.|+.+++++.++|++++|++|++....+|
T Consensus 568 ~~~~l-~~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~~ 612 (613)
T KOG0061|consen 568 GEDVL-KQLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRKR 612 (613)
T ss_pred HHHHH-HhcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 55554 4589999999999999999999999999999998876654
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2.3e-89 Score=852.77 Aligned_cols=544 Identities=29% Similarity=0.488 Sum_probs=475.4
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEECCccCCcccccceEEEecCCCCCCCCCC
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSIKISGYPKKHETFARISGYCEQNDIHSPFVT 794 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lT 794 (1262)
+++.+|+|+|++++|||+++|+|||||||||||++|+|+.+++ ..+|+|.+||.+.+...+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999987543 357999999998765567788999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCCcceeCCCC
Q 000838 795 VHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 873 (1262)
Q Consensus 795 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~-~~~lSgGqrqrl~ia~al~~~p~illlDEPts 873 (1262)
|+||+.|++.++.+...+.++++++++++++.+||.+++|+.+|+++ .++||||||||++||++|+.+|++++|||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999988877666667777889999999999999999999753 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc---C------C------------cccCCCCCCchhhH
Q 000838 874 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI---P------G------------IEKIKNGYNPATWM 932 (1262)
Q Consensus 874 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~---~------~------------~~~~~~~~npad~~ 932 (1262)
|||+.++..+++.|++++++|+|||+++|||+.++++.||+++ . | ...||++.|||||+
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~ 275 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFSDLGHPCPENYNPADFY 275 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHHHcCCCCCCCCChHHHH
Confidence 9999999999999999988899999999999999999999932 0 1 02589999999999
Q ss_pred HHhcchhhhhh-----ccccHHHHHHhhHHHHhhHHHHhhhcCCCCC---CCCCCCCCccCCchHHHHHHHHHHHHHHHh
Q 000838 933 LEVTAASQEVA-----LGVDFTDIFKRSELYRGNKALIEDLSKPTPG---SKDLYFPTQYSQSAFTQFIACLWKQHWSYW 1004 (1262)
Q Consensus 933 l~~~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~ 1004 (1262)
+|+++.+.+.. ...++.+.|+.|+.+++..+.......+.++ ........++..++++|+.+|++|+++..|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~ 355 (617)
T TIGR00955 276 VQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVL 355 (617)
T ss_pred HHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHHHHHHHh
Confidence 99986543211 1234566777777666554433321111111 111112235678999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHHHHHHhhccCCCCCCChhhHHHhHhHHHHHHHHHHHhhhhhhhhhhHhhhhHHHhhccCCCCC
Q 000838 1005 RNPPYTAVRFFFTTLISLMFGTLFWDLGTKTGKNQDLFNAMGSMYIAVLFIGVQYCFSVQPIVSVERTIFYRESAAGMYS 1084 (1262)
Q Consensus 1005 r~~~~~~~~~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~r~v~~re~~~~~Y~ 1084 (1262)
|||.++..|+++.+++|+++|++||+++. +++++++|.|++|++++++++.+++++.+.++.||++|+||+.+|+|+
T Consensus 356 R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~ 432 (617)
T TIGR00955 356 RDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYR 432 (617)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccC
Confidence 99999999999999999999999999875 467899999999999999888887788888999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHhhhhhcccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 000838 1085 GQPWALAQAAIEIPYIFIQSSLYGVLVYAMIGFDWTAAKFFWYIFFMFFTLLYFTFYGMMAVAMTPNHHIAAIVSTLFFG 1164 (1262)
Q Consensus 1085 ~~~~~~a~~l~~~P~~~~~~~~f~~~~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 1164 (1262)
+++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|++++++..++++++|+++++++||..+|+.+++++++
T Consensus 433 ~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~ 512 (617)
T TIGR00955 433 VSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVI 512 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCcchhhHHHHhhCHHHHHHHHHHHHhhCCCcc-ccCCC------CcHHHHHHhhcCCcccchhHHHH
Q 000838 1165 LWNVFTGFLIPRPRIPIWWRWYYWADPMAWTLYGLVVSQFGDLED-KLESG------ETVKQFLRSYFGYKHDFLGVVAV 1237 (1262)
Q Consensus 1165 ~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~nef~~~~~-~~~~g------~~~~~~~~~~~~~~~~~~~~~~~ 1237 (1262)
++++|+||++++++||+||+|++|+||++|++||++.|||.+.++ +|+++ +..++++++.||++.++.|++++
T Consensus 513 ~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~~~~~~~~ 592 (617)
T TIGR00955 513 PFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNADLYLDLI 592 (617)
T ss_pred HHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCcccHHHHHH
Confidence 999999999999999999999999999999999999999998775 56421 11136667789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccccCC
Q 000838 1238 VVAGFAAVFGFLFALGIKQFNFQRR 1262 (1262)
Q Consensus 1238 il~~~~~~~~~~~~~~l~~~~~~~r 1262 (1262)
++++++++|++++|++|++-...+|
T Consensus 593 il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 593 GLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999777766
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=6.8e-89 Score=845.50 Aligned_cols=559 Identities=24% Similarity=0.391 Sum_probs=459.6
Q ss_pred CCcEEEEeeeEEEEecchhhh--------------hc--cccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHH
Q 000838 689 EPHSLIFDEVTYSVDMPQEMK--------------LQ--GVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 752 (1262)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~ 752 (1262)
.+..+.|.|++|.+....... .. ....+++.+|+|+|+++++||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 357889999999986542100 00 11224578999999999999999999999999999999999
Q ss_pred CCCCCCeeEEEEEECCccCCcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc
Q 000838 753 GRKTGGYITGSIKISGYPKKHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL 832 (1262)
Q Consensus 753 g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~ 832 (1262)
|+.++...+|+|.+||.+... ..++.+|||+|++.+++.+||+|++.|.+.++.+...+.++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~-~~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTK-QILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECch-hhccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 987654468999999987643 2345689999999999999999999998877655444555666779999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHh
Q 000838 833 RQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESF 912 (1262)
Q Consensus 833 ~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~f 912 (1262)
+|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.+
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999887788999999999999999999999999999999999999999999999998889999999999998899999
Q ss_pred hhhc----------------------CCcccCCCCCCchhhHHHhcchhhhh------hc---cccHHHHHHhhHHHHhh
Q 000838 913 DEAI----------------------PGIEKIKNGYNPATWMLEVTAASQEV------AL---GVDFTDIFKRSELYRGN 961 (1262)
Q Consensus 913 d~~~----------------------~~~~~~~~~~npad~~l~~~~~~~~~------~~---~~~~~~~~~~s~~~~~~ 961 (1262)
|+.+ .|. .||.++|||||++|+.+.+.+. .. ..+..+.|+... .++.
T Consensus 275 D~iilL~~G~iv~~G~~~~~~~~f~~~G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~ 352 (659)
T PLN03211 275 DSVLVLSEGRCLFFGKGSDAMAYFESVGF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTLL-APKV 352 (659)
T ss_pred ceEEEecCCcEEEECCHHHHHHHHHHCCC-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhhc-cHHH
Confidence 9832 121 5999999999999998753210 00 011233443211 1111
Q ss_pred HHHHhh--hcC-CCC-----CCCCC-CCCCccCCchHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHhhccCC
Q 000838 962 KALIED--LSK-PTP-----GSKDL-YFPTQYSQSAFTQFIACLWKQHWSYWRNPPYTAVRFFFTTLISLMFGTLFWDLG 1032 (1262)
Q Consensus 962 ~~~~~~--~~~-~~~-----~~~~~-~~~~~~~~~~~~q~~~l~~R~~~~~~r~~~~~~~~~~~~~~~~l~~G~~f~~~~ 1032 (1262)
.+.++. ..+ ..+ ..... .....+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|++||+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~ 431 (659)
T PLN03211 353 KAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD 431 (659)
T ss_pred HHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111111 000 000 00000 011224578999999999999988 89999999999999999999999999974
Q ss_pred CCCCChhhHHHhHhHHHHHHHHHHHhhhhhhhhhhHhhhhHHHhhccCCCCChHHHHHHHHHHHHHHHHHHHhhHhhhhh
Q 000838 1033 TKTGKNQDLFNAMGSMYIAVLFIGVQYCFSVQPIVSVERTIFYRESAAGMYSGQPWALAQAAIEIPYIFIQSSLYGVLVY 1112 (1262)
Q Consensus 1033 ~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~r~v~~re~~~~~Y~~~~~~~a~~l~~~P~~~~~~~~f~~~~Y 1112 (1262)
..++++|.|++||++++.++.+++.+++.++.||+||+||+.+|+|++++|++|++++|+|+.++.+++|++|+|
T Consensus 432 -----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y 506 (659)
T PLN03211 432 -----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTY 506 (659)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhee
Confidence 467999999999999998888888888999999999999999999999999999999999999999999999999
Q ss_pred cccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhhccCCCCCCcchhhHHHHhhCHH
Q 000838 1113 AMIGFDWTAAKFFWYIFFMFFTLLYFTFYGMMAVAMTPNHHIAAIVSTLFFGLWNVFTGFLIPRPRIPIWWRWYYWADPM 1192 (1262)
Q Consensus 1113 ~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~ 1192 (1262)
||+||++++.+||+|+++++++.++++++|+++++++||..+|+.+++++++++++|+||+++ +||+||+|++|+||+
T Consensus 507 ~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~ 584 (659)
T PLN03211 507 WMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTT 584 (659)
T ss_pred EcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHH
Confidence 999999999999999999999999999999999999999999999999999999999999997 799999999999999
Q ss_pred HHHHHHHHHHhhCCCcc-----ccCCC----CcHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000838 1193 AWTLYGLVVSQFGDLED-----KLESG----ETVKQFLRSYFGYKHDFLGVVAVVVAGFAAVFGFLFALGIKQFNF 1259 (1262)
Q Consensus 1193 ~y~~~~l~~nef~~~~~-----~~~~g----~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~l~~~~~ 1259 (1262)
+|++||+++|||++.+. .|+.. .....++ ...+++..+.|.++++|++++++|++++|++|++.+|
T Consensus 585 ~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~~ 659 (659)
T PLN03211 585 FYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFV-EEDVAGQISPATSVSVLIFMFVGYRLLAYLALRRIKH 659 (659)
T ss_pred HHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccc-hhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999986542 45311 0111122 2234445578999999999999999999999998875
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=6.9e-88 Score=897.22 Aligned_cols=568 Identities=23% Similarity=0.380 Sum_probs=486.2
Q ss_pred CCCCcEEEEeeeEEEEecchh-------------hh-h-----ccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHH
Q 000838 687 PFEPHSLIFDEVTYSVDMPQE-------------MK-L-----QGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTL 747 (1262)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~-------------~~-~-----~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTL 747 (1262)
|.+...+.|+|+++....... .. . .+..+.++++|+|||+.+++||+++|+||||||||||
T Consensus 24 ~~~~~~v~~~~l~v~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTL 103 (1394)
T TIGR00956 24 KPYKLGVAYKNLSAYGVAADSDYQPTFPNALLKILTRGFRKLKKFRDTKTFDILKPMDGLIKPGELTVVLGRPGSGCSTL 103 (1394)
T ss_pred CCCeeeEEEECCEEEEEeccccccCchHHHHHHHHHHHHHHhcccCCCCcceeeeCCEEEEECCEEEEEECCCCCCHHHH
Confidence 334567899999877632111 00 0 0122345789999999999999999999999999999
Q ss_pred HHHHHCCCCC--CeeEEEEEECCccCCc--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCC----CCCHHHHHH-
Q 000838 748 MDVLAGRKTG--GYITGSIKISGYPKKH--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAP----EVDSETRKM- 818 (1262)
Q Consensus 748 l~~l~g~~~~--~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~----~~~~~~~~~- 818 (1262)
||+|+|+..+ .+.+|+|.+||.+... ..+++.++|++|+|.+++.+||+|++.|++.++.+. +.++++.++
T Consensus 104 Lk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~ 183 (1394)
T TIGR00956 104 LKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTPQNRPDGVSREEYAKH 183 (1394)
T ss_pred HHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHH
Confidence 9999998532 2468999999987642 234567999999999999999999999998876532 223333333
Q ss_pred HHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEE
Q 000838 819 FIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTV 897 (1262)
Q Consensus 819 ~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tv 897 (1262)
.++++++.+||.+++|+.+|++.+++|||||||||+||++|+.+|+|++|||||+|||+.++..+++.|++++++ |+||
T Consensus 184 ~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tv 263 (1394)
T TIGR00956 184 IADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTP 263 (1394)
T ss_pred HHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEE
Confidence 356789999999999999998888999999999999999999999999999999999999999999999999875 9999
Q ss_pred EEEecCCCHHHHHHhhhhc----------------------CCcccCCCCCCchhhHHHhcchhhhh----------hcc
Q 000838 898 VCTIHQPSIDIFESFDEAI----------------------PGIEKIKNGYNPATWMLEVTAASQEV----------ALG 945 (1262)
Q Consensus 898 i~~~H~~~~~~~~~fd~~~----------------------~~~~~~~~~~npad~~l~~~~~~~~~----------~~~ 945 (1262)
|+++|||+.++++.||+++ .|. .||++.|||||++|+++.+.+. ...
T Consensus 264 ii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~yF~~lG~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~ 342 (1394)
T TIGR00956 264 LVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQYFEKMGF-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTP 342 (1394)
T ss_pred EEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHHHHHcCC-CCCCCCChHHHHHhccChhhhhccccccccCCCCH
Confidence 9999999999999999832 122 6999999999999998654311 123
Q ss_pred ccHHHHHHhhHHHHhhHHHHhhhcCCC---------------CCCCCCCCCCccCCchHHHHHHHHHHHHHHHhcChhhH
Q 000838 946 VDFTDIFKRSELYRGNKALIEDLSKPT---------------PGSKDLYFPTQYSQSAFTQFIACLWKQHWSYWRNPPYT 1010 (1262)
Q Consensus 946 ~~~~~~~~~s~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~r~~~~~ 1010 (1262)
.+++++|++|+.+++..+.++...... ..++.....+.+..|+++|+++|++|++++.||||.++
T Consensus 343 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~ 422 (1394)
T TIGR00956 343 QEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFT 422 (1394)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 579999999999887766554322110 00111122345788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCChhhHHHhHhHHHHHHHHHHHhhhhhhhhhhHhhhhHHHhhccCCCCChHHHHH
Q 000838 1011 AVRFFFTTLISLMFGTLFWDLGTKTGKNQDLFNAMGSMYIAVLFIGVQYCFSVQPIVSVERTIFYRESAAGMYSGQPWAL 1090 (1262)
Q Consensus 1011 ~~~~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~r~v~~re~~~~~Y~~~~~~~ 1090 (1262)
++|+++++++|+++|++||+++. +++++++|.|++||++++.++.++.++ +.++.||+||+||+.+|+|++++|++
T Consensus 423 ~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~l 498 (1394)
T TIGR00956 423 LFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAILFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAI 498 (1394)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHH
Confidence 99999999999999999999975 457899999999999999999887776 44668999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHhhhhhcccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhh
Q 000838 1091 AQAAIEIPYIFIQSSLYGVLVYAMIGFDWTAAKFFWYIFFMFFTLLYFTFYGMMAVAMTPNHHIAAIVSTLFFGLWNVFT 1170 (1262)
Q Consensus 1091 a~~l~~~P~~~~~~~~f~~~~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~ 1170 (1262)
|++++|+|+.++.+++|++|+|||+||++++++||+|+++++++.++++++++++++++||.++|+.+++++++++++|+
T Consensus 499 a~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~ 578 (1394)
T TIGR00956 499 ASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYT 578 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcchhhHHHHhhCHHHHHHHHHHHHhhCCCccccC----C---------------------C---CcHHHHHH
Q 000838 1171 GFLIPRPRIPIWWRWYYWADPMAWTLYGLVVSQFGDLEDKLE----S---------------------G---ETVKQFLR 1222 (1262)
Q Consensus 1171 G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~nef~~~~~~~~----~---------------------g---~~~~~~~~ 1222 (1262)
||++|+++||+||+|++|+||++|+|||+++|||++..++|+ . | .++.+|+.
T Consensus 579 Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~ 658 (1394)
T TIGR00956 579 GFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLK 658 (1394)
T ss_pred ccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHH
Confidence 999999999999999999999999999999999999888772 1 1 15678888
Q ss_pred hhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000838 1223 SYFGYKHDFLGVVAVVVAGFAAVFGFLFALGIKQFNF 1259 (1262)
Q Consensus 1223 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~l~~~~~ 1259 (1262)
..||++.+|.|+|++|+++|+++|+++++++++|+++
T Consensus 659 ~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 659 LSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred hcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 8899999999999999999999999999999999874
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=8.9e-87 Score=880.86 Aligned_cols=570 Identities=23% Similarity=0.360 Sum_probs=478.5
Q ss_pred CCCCcEEEEeeeEEEEecchh-------h----------h-hcc---ccCCceEEeeceEEEEeCCeEEEEEcCCCCcHH
Q 000838 687 PFEPHSLIFDEVTYSVDMPQE-------M----------K-LQG---VLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKT 745 (1262)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~-------~----------~-~~~---~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKS 745 (1262)
+.+...+.|+|+++..+.... . . ..+ .++.++.+|+|+|+.++|||+++|+||||||||
T Consensus 126 ~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKS 205 (1470)
T PLN03140 126 KLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKT 205 (1470)
T ss_pred CCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHH
Confidence 344668999999987762110 0 0 001 123457899999999999999999999999999
Q ss_pred HHHHHHHCCCCCC-eeEEEEEECCccCCcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCC-------CCHHHH-
Q 000838 746 TLMDVLAGRKTGG-YITGSIKISGYPKKHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPE-------VDSETR- 816 (1262)
Q Consensus 746 TLl~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~-------~~~~~~- 816 (1262)
||||+|+|+.++. ..+|+|.+||++......++.++||+|+|.+++.+||+|++.|++.++.... ...+++
T Consensus 206 TLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~ 285 (1470)
T PLN03140 206 TLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKD 285 (1470)
T ss_pred HHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHh
Confidence 9999999987532 3589999999887544446789999999999999999999999987763211 111111
Q ss_pred -----------------------HHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCC
Q 000838 817 -----------------------KMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 873 (1262)
Q Consensus 817 -----------------------~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPts 873 (1262)
+..++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|++++|||||+
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTs 365 (1470)
T PLN03140 286 AGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEIST 365 (1470)
T ss_pred ccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCc
Confidence 123578999999999999999998889999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhhc----------------------CCcccCCCCCCchh
Q 000838 874 GLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEAI----------------------PGIEKIKNGYNPAT 930 (1262)
Q Consensus 874 gLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~~----------------------~~~~~~~~~~npad 930 (1262)
|||+.++.++++.|+++++ .|+|+|+++|||+.+++++||+++ .|+ .||+++||||
T Consensus 366 GLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf-~cP~~~n~AD 444 (1470)
T PLN03140 366 GLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESCGF-KCPERKGTAD 444 (1470)
T ss_pred CccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHcCC-CCCCCCChHH
Confidence 9999999999999999986 489999999999999999999832 122 6999999999
Q ss_pred hHHHhcchhhh-h-----------hccccHHHHHHhhHHHHhhHHHHhhhcCCCCCCCCCCCCCccCCchHHHHHHHHHH
Q 000838 931 WMLEVTAASQE-V-----------ALGVDFTDIFKRSELYRGNKALIEDLSKPTPGSKDLYFPTQYSQSAFTQFIACLWK 998 (1262)
Q Consensus 931 ~~l~~~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 998 (1262)
|++|+++..+. . ....++++.|++|+.+++..+.++.........+.....++|..|++.|++.|++|
T Consensus 445 Fl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R 524 (1470)
T PLN03140 445 FLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDK 524 (1470)
T ss_pred HHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHH
Confidence 99999875332 1 12346889999999888766544321111111111112346889999999999999
Q ss_pred HHHHHhcChhhHHHHHHHHHHHHHHHHHhhccCCCCCCChhhHHHhHhHHHHHHHHHHHhhhhhhhhhhHhhhhHHHhhc
Q 000838 999 QHWSYWRNPPYTAVRFFFTTLISLMFGTLFWDLGTKTGKNQDLFNAMGSMYIAVLFIGVQYCFSVQPIVSVERTIFYRES 1078 (1262)
Q Consensus 999 ~~~~~~r~~~~~~~~~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~r~v~~re~ 1078 (1262)
++++.+||+.++..|+++.+++|+++|++||+++.+..+..+.+.+.|++||++++.++.++.++ +.++.+|+||+||+
T Consensus 525 ~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l-~~~~~~r~vf~ker 603 (1470)
T PLN03140 525 EWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAEL-ALMIQRLPVFYKQR 603 (1470)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccchhHHhh
Confidence 99999999999999999999999999999999986554455667788999999988888776554 66789999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhhHhhhhhcccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 000838 1079 AAGMYSGQPWALAQAAIEIPYIFIQSSLYGVLVYAMIGFDWTAAKFFWYIFFMFFTLLYFTFYGMMAVAMTPNHHIAAIV 1158 (1262)
Q Consensus 1079 ~~~~Y~~~~~~~a~~l~~~P~~~~~~~~f~~~~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 1158 (1262)
++++|++++|++|++++++|+.++.+++|++|+|||+||++++++||+|+++++++.++++++++++++++||..+|+.+
T Consensus 604 ~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~ 683 (1470)
T PLN03140 604 DLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTG 683 (1470)
T ss_pred hccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCcchhhHHHHhhCHHHHHHHHHHHHhhCCCccc---cC-CCC-cHHHHHHhhcCCccc--c
Q 000838 1159 STLFFGLWNVFTGFLIPRPRIPIWWRWYYWADPMAWTLYGLVVSQFGDLEDK---LE-SGE-TVKQFLRSYFGYKHD--F 1231 (1262)
Q Consensus 1159 ~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~nef~~~~~~---~~-~g~-~~~~~~~~~~~~~~~--~ 1231 (1262)
++++++++++|+||++|+++||+||+|++|+||++|++||+++|||.+..+. |. ++. ++.+++ +.+|++.+ |
T Consensus 684 ~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L-~~~g~~~~~~~ 762 (1470)
T PLN03140 684 GALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVL-NIFDVFTDKNW 762 (1470)
T ss_pred HHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHH-HhcCcCccccc
Confidence 9999999999999999999999999999999999999999999999876543 21 122 455555 78999754 6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000838 1232 LGVVAVVVAGFAAVFGFLFALGIKQFNF 1259 (1262)
Q Consensus 1232 ~~~~~~il~~~~~~~~~~~~~~l~~~~~ 1259 (1262)
.|+++++|++|+++|+++++++|+|++.
T Consensus 763 ~w~~~~iL~~~~v~f~~l~~l~L~~~~~ 790 (1470)
T PLN03140 763 YWIGVGALLGFTILFNVLFTLALTYLNP 790 (1470)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 6999999999999999999999999873
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-84 Score=799.27 Aligned_cols=542 Identities=25% Similarity=0.443 Sum_probs=481.7
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEECCccCCcccccceEEEecCCCCCCCCCC
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSIKISGYPKKHETFARISGYCEQNDIHSPFVT 794 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lT 794 (1262)
.+..+|+|+|+.++|||++.++||+||||||||++|+|..+.. ...|+|.+||++.+...-++.++|++|+|.|+|.||
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3457999999999999999999999999999999999975532 235799999998776545788999999999999999
Q ss_pred HHHHHHHHHHhhcCCC----CCHHHHH-HHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccee
Q 000838 795 VHESLAFSAWLRLAPE----VDSETRK-MFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 869 (1262)
Q Consensus 795 v~e~l~~~~~~~~~~~----~~~~~~~-~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlD 869 (1262)
|+|+|.|+++++.+.. .++.+.. +..+.+++.+||++++|+++|++..||+||||||||++|.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999987632 2222222 2577899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc----------------------CCcccCCCCC
Q 000838 870 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI----------------------PGIEKIKNGY 926 (1262)
Q Consensus 870 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~----------------------~~~~~~~~~~ 926 (1262)
|+|+|||+.++.++++.||++++. +.|++++.|||+++++++||+++ .|+ .||+..
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf-~cP~r~ 364 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGF-KCPPRK 364 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCc-cCCCcc
Confidence 999999999999999999999875 89999999999999999999932 112 699999
Q ss_pred CchhhHHHhcchhhhh-----------hc-cccHHHHHHhhHHHHhhHHHHhhhcCCCCCCCCCCCCCccCCchHHHHHH
Q 000838 927 NPATWMLEVTAASQEV-----------AL-GVDFTDIFKRSELYRGNKALIEDLSKPTPGSKDLYFPTQYSQSAFTQFIA 994 (1262)
Q Consensus 927 npad~~l~~~~~~~~~-----------~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 994 (1262)
++|||+.++++...+. .. ..++++.|.+|+.+++.+..++........++.....++|..|+|.|++.
T Consensus 365 ~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~ 444 (1391)
T KOG0065|consen 365 GTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKA 444 (1391)
T ss_pred CHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHH
Confidence 9999999998732211 11 25799999999999987765544322233334445566899999999999
Q ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHhhccCCCCCCChhhHHHhHhHHHHHHHHHHHhhhhhhhhhhHhhhhHH
Q 000838 995 CLWKQHWSYWRNPPYTAVRFFFTTLISLMFGTLFWDLGTKTGKNQDLFNAMGSMYIAVLFIGVQYCFSVQPIVSVERTIF 1074 (1262)
Q Consensus 995 l~~R~~~~~~r~~~~~~~~~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~r~v~ 1074 (1262)
|++|.++.+.||..++..++++.+++|+++|++||+++. .+..+.+.|.|++||++++.+++.+.++ +..++.||||
T Consensus 445 c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~~~~pv~ 521 (1391)
T KOG0065|consen 445 CTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTFQRLPVF 521 (1391)
T ss_pred HHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHHhhcchH
Confidence 999999999999999999999999999999999999983 4567889999999999999999888887 5566899999
Q ss_pred HhhccCCCCChHHHHHHHHHHHHHHHHHHHhhHhhhhhcccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Q 000838 1075 YRESAAGMYSGQPWALAQAAIEIPYIFIQSSLYGVLVYAMIGFDWTAAKFFWYIFFMFFTLLYFTFYGMMAVAMTPNHHI 1154 (1262)
Q Consensus 1075 ~re~~~~~Y~~~~~~~a~~l~~~P~~~~~~~~f~~~~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1154 (1262)
+|||+..+|+|+||.++.+++++|+.++.+++|.+|+||++||.+++++||+|++++++.++|++++++++++++|+...
T Consensus 522 ~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~ 601 (1391)
T KOG0065|consen 522 YKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSI 601 (1391)
T ss_pred HHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCcchhhHHHHhhCHHHHHHHHHHHHhhCCCccccC-CCC------------------
Q 000838 1155 AAIVSTLFFGLWNVFTGFLIPRPRIPIWWRWYYWADPMAWTLYGLVVSQFGDLEDKLE-SGE------------------ 1215 (1262)
Q Consensus 1155 a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~nef~~~~~~~~-~g~------------------ 1215 (1262)
|+.+|++.++++.+++||+||.++||+||+|++|+||+.|++|++++|||+++++.|+ .|+
T Consensus 602 An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~ 681 (1391)
T KOG0065|consen 602 ANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGAT 681 (1391)
T ss_pred HhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccc
Confidence 9999999999999999999999999999999999999999999999999999999884 221
Q ss_pred ------cHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 000838 1216 ------TVKQFLRSYFGYKHDFLGVVAVVVAGFAAVFGFLFALGIKQFNFQR 1261 (1262)
Q Consensus 1216 ------~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~l~~~~~~~ 1261 (1262)
.+.+|+...|++++.|.|||+||++||.++|.++..+++.|+++.+
T Consensus 682 ~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~ 733 (1391)
T KOG0065|consen 682 LGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLK 733 (1391)
T ss_pred cCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccc
Confidence 3567788888999999999999999999999999999999999653
No 10
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-73 Score=697.82 Aligned_cols=546 Identities=29% Similarity=0.494 Sum_probs=459.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
++||||||||||||||++|+|+.+.+..++|+|++||++......++.+|||.|+|.++|++||+|+|.|++.+|-+..
T Consensus 58 l~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~- 136 (613)
T KOG0061|consen 58 LLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS- 136 (613)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-
Confidence 5899999999999999999999987557899999999887777778899999999999999999999999999875321
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
...++++++|+++++.|||.+|+||+||+...+++||||||||+||..|+
T Consensus 137 ------------------------------~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell 186 (613)
T KOG0061|consen 137 ------------------------------LSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELL 186 (613)
T ss_pred ------------------------------CCHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHH
Confidence 12234567899999999999999999999888999999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHHHHhC
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESM 240 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~~~~~ 240 (1262)
.||+||+|||||||||+.++.++++.|+++|+. |+|+|++||||+.+++++||++++|++|+++|.|+++++.++|++.
T Consensus 187 ~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~ 265 (613)
T KOG0061|consen 187 TDPSILFLDEPTSGLDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSL 265 (613)
T ss_pred cCCCEEEecCCCCCcchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhC
Confidence 999999999999999999999999999999986 9999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHhhhcCch--hhhhhhhhcCCCCCcCCHHHHHHHHhchhhhHHHHHHhcCCCCCchhhHhhhhcccc
Q 000838 241 GFKCPQRKGVADFLQEVTSKK--DQQQYWAHKEIPYRFITVQEFAEAFKSFHVGQKLADELRIPFDKSQSHRAALAKKVY 318 (1262)
Q Consensus 241 g~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (1262)
|++||++.||+||+.++.+.+ .+...... ......+.++..+...+..+.......+. ...+...
T Consensus 266 G~~~P~~~Npadf~l~l~s~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 332 (613)
T KOG0061|consen 266 GFPCPELENPADFLLDLLSVDSGTRELEEAV--------RIAKLINKFSQTDNLKKTLEALEKSLSTS-----KKVEIGT 332 (613)
T ss_pred CCCCCCcCChHHHHHHHHccCCCchhHHhHH--------HHHHHhhhccccchhhhhHHHHhhhcccc-----ccccccc
Confidence 999999999999999987632 11100000 00000011100000000000000000000 0001111
Q ss_pred cccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCcccCccchhhHHHHHHHHHHHHHHH-HH
Q 000838 319 GVGKRELLKACFSREFLLMKRNSFVYIFKLVQIAITALVTMTLFFRTKMKKDSVADGGVYAGVMFFAIVIVMFNGYA-EI 397 (1262)
Q Consensus 319 ~~~~~~~~~~l~~r~~~~~~r~~~~~~~~~~~~~i~~l~~g~lf~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~-~~ 397 (1262)
..+++.|+..+.+|.++...|++.+...+.++.+++++++|.+||+.+.+. .....+.|++|+.+.+..+.... .+
T Consensus 333 ~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~---~~~~~~~g~~~~~~~~~~f~~~~~~i 409 (613)
T KOG0061|consen 333 SPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDA---KGIQNRLGLFFFILSFMTFLSMFGAV 409 (613)
T ss_pred CCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCch---HHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 678999999999999999999999999999999999999999999764332 23336788888888777665554 68
Q ss_pred HHhhhccceeeecccCCCCCchhHHHHHHHHHhhHHHHHHHHhhheeeeeeccccChhhHHHHHHHHHHHHHHHHHHHHH
Q 000838 398 SMTIVKIPVFYKQRDLQFFPPWAYALPTWILKIPISFVEVVVWVFVSYYVIGYDPNAGRFFKQYFLLLAVNQMACALFRF 477 (1262)
Q Consensus 398 ~~~~~~~~v~~rer~~~~y~~~~~~l~~~l~~lp~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~ 477 (1262)
..+..+++++.||+.+++|+.++|++++.+.++|+.++.+++|.+++|||+|++++..+|+.+.++.++..+++.+++.+
T Consensus 410 ~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~ 489 (613)
T KOG0061|consen 410 PVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLF 489 (613)
T ss_pred HHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCchHHHHHHHHHHHHHHHHHhccccCcCCcccchhhhhhhCHHHHHHHHHHHhhcCCCcccccCC--CCCCcchH
Q 000838 478 IAATGRNMVVANTFGTVALLVLFALGGFLLSREDIKKWWIWGYWCSPLMYAQNAIVANEFLGHSWRKFTP--DSNEPLGV 555 (1262)
Q Consensus 478 i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~~sp~~y~~~~~~~nef~~~~~~~~~~--~~~~~~g~ 555 (1262)
+++..++...|..++++..+.+++++||+++.+++|.||.|+.|+|+++|++|+++.|+|.+....|... ..+...+.
T Consensus 490 i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~ 569 (613)
T KOG0061|consen 490 ISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGE 569 (613)
T ss_pred HHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHH
Confidence 9999999999999999999999999999999999999999999999999999999999999744444332 34567788
Q ss_pred HHhhhcCccCCCcchhHhHHHHHHHHHHHHHHHHHHHHhhc
Q 000838 556 QVLKSRGFFPDAYWYWLGLGALFGFVLLLHIAFTLALTFLN 596 (1262)
Q Consensus 556 ~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~l~~~~ 596 (1262)
+++++.++...+ .|.++.+++++.++++++.+++|++..
T Consensus 570 ~~l~~~~~~~~~--~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 570 DVLKQLGFEDSS--FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred HHHHhcCCcccc--cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999988886554 468889999999999999999987654
No 11
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.2e-72 Score=702.74 Aligned_cols=552 Identities=23% Similarity=0.391 Sum_probs=457.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++.+||+|||.|++.++.....
T Consensus 53 ~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 132 (617)
T TIGR00955 53 LLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTVREHLMFQAHLRMPRRV 132 (617)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcHHHHHHHHHhcCCCCCC
Confidence 58999999999999999999998875456899999999886555567899999999999999999999999877632110
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCc-ccccccccchhhHHHHHH
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEM-IRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~-~~~LSGGqkqRvsiA~al 159 (1262)
..++.+++++++++.+||.+++||.||++. .++|||||||||+|||+|
T Consensus 133 -------------------------------~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL 181 (617)
T TIGR00955 133 -------------------------------TKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASEL 181 (617)
T ss_pred -------------------------------CHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHH
Confidence 011234568899999999999999999853 689999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHHHHh
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFES 239 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~~~~ 239 (1262)
+.+|+|++|||||||||+.++.++++.|+++++ +++|+|+++||++.++.++||++++|++|+++++|+++++.++|++
T Consensus 182 ~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~~ 260 (617)
T TIGR00955 182 LTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFSD 260 (617)
T ss_pred HcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999875 4778888888888899999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHhhhcCchhhhhhhhhcCCCCCcCCHHHHHHHHhchhhhHHHHHHhcCCCCCch---hhHhhhhcc
Q 000838 240 MGFKCPQRKGVADFLQEVTSKKDQQQYWAHKEIPYRFITVQEFAEAFKSFHVGQKLADELRIPFDKSQ---SHRAALAKK 316 (1262)
Q Consensus 240 ~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 316 (1262)
+|++||++.|++|++.++.+..+..+.. .....+++.+.++.++..++..++......... .........
T Consensus 261 ~g~~~p~~~n~ad~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (617)
T TIGR00955 261 LGHPCPENYNPADFYVQVLAVIPGSENE-------SRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGI 333 (617)
T ss_pred cCCCCCCCCChHHHHHHHhhcCcccccc-------hHHHHHHHHHHHhcchhhHHHHHHhhhhhcccccccccccccccc
Confidence 9999999999999999887643221100 001223445555554443333222211110000 000001123
Q ss_pred cccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCcccCccchhhHHHHHHHHHHHHHH-H
Q 000838 317 VYGVGKRELLKACFSREFLLMKRNSFVYIFKLVQIAITALVTMTLFFRTKMKKDSVADGGVYAGVMFFAIVIVMFNGY-A 395 (1262)
Q Consensus 317 ~~~~~~~~~~~~l~~r~~~~~~r~~~~~~~~~~~~~i~~l~~g~lf~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~-~ 395 (1262)
.+..+++.|+..+++|.++..+|++..+..++++.+++++++|++|++.+.+ ..+...+.|++|+.+.+..+.+. .
T Consensus 334 ~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~---~~~~~~~~g~lf~~~~~~~f~~~~~ 410 (617)
T TIGR00955 334 GYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLT---QKGVQNINGALFLFLTNMTFQNVFP 410 (617)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999975433 23455677888888877766654 4
Q ss_pred HHHHhhhccceeeecccCCCCCchhHHHHHHHHHhhHHHHHHHHhhheeeeeeccccChhhHHHHHHHHHHHHHHHHHHH
Q 000838 396 EISMTIVKIPVFYKQRDLQFFPPWAYALPTWILKIPISFVEVVVWVFVSYYVIGYDPNAGRFFKQYFLLLAVNQMACALF 475 (1262)
Q Consensus 396 ~~~~~~~~~~v~~rer~~~~y~~~~~~l~~~l~~lp~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~ 475 (1262)
.+..+..++++++||+..++|++.+|++++.+.++|+.++.+++|.+++|||+|+++++.+|+.+++++.+...++.+++
T Consensus 411 ~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~ 490 (617)
T TIGR00955 411 VINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFG 490 (617)
T ss_pred HHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHhccccCcCCcccchhhhhhhCHHHHHHHHHHHhhcCCCcc-cccCCCC---CC
Q 000838 476 RFIAATGRNMVVANTFGTVALLVLFALGGFLLSREDIKKWWIWGYWCSPLMYAQNAIVANEFLGHSW-RKFTPDS---NE 551 (1262)
Q Consensus 476 ~~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~~sp~~y~~~~~~~nef~~~~~-~~~~~~~---~~ 551 (1262)
.++++++++..+|..++++..+++++++||+++..++|.||+|++|+||++|++++++.|||.+..+ .|...+. +.
T Consensus 491 ~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~ 570 (617)
T TIGR00955 491 YLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCP 570 (617)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998775 3432111 23
Q ss_pred cchHHHhhhcCccCCCcchhHhHHHHHHHHHHHHHHHHHHHHhhc
Q 000838 552 PLGVQVLKSRGFFPDAYWYWLGLGALFGFVLLLHIAFTLALTFLN 596 (1262)
Q Consensus 552 ~~g~~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~l~~~~ 596 (1262)
..|..+++.+++..+ +.|.++++++++.++|.++.+++|++..
T Consensus 571 ~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~~ 613 (617)
T TIGR00955 571 SSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIRI 613 (617)
T ss_pred cChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 468999998888654 4588999999999999999999987643
No 12
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3.2e-72 Score=696.49 Aligned_cols=547 Identities=21% Similarity=0.357 Sum_probs=431.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
+++|+|||||||||||++|+|+.+|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.....
T Consensus 96 ~~aI~GpnGaGKSTLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~ 173 (659)
T PLN03211 96 ILAVLGPSGSGKSTLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL 173 (659)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC
Confidence 48999999999999999999998874 3589999999987543 235699999999999999999999998765421100
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
..++.+++++++++.+||++++||++|++.+++|||||||||+||++|+
T Consensus 174 -------------------------------~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~ 222 (659)
T PLN03211 174 -------------------------------TKQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEML 222 (659)
T ss_pred -------------------------------CHHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHH
Confidence 0112334578899999999999999999999999999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHHHHhC
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESM 240 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~~~~~ 240 (1262)
.+|+|++|||||+|||+.++.++++.|+++++ +++|+|+++||+..++.++||++++|++|++++.|+++++.++|+++
T Consensus 223 ~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~ 301 (659)
T PLN03211 223 INPSLLILDEPTSGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESV 301 (659)
T ss_pred hCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHC
Confidence 99999999999999999999999999999865 46777777776666899999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHhhhcCchhhhhhhhhcCCCCCcCCHHHHHHHHhchhhhHHHHHHhcC---CCCCchh-----hHh-
Q 000838 241 GFKCPQRKGVADFLQEVTSKKDQQQYWAHKEIPYRFITVQEFAEAFKSFHVGQKLADELRI---PFDKSQS-----HRA- 311 (1262)
Q Consensus 241 g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~- 311 (1262)
|++||++.||+||+.++.+...........+.+ ...+...+.|++... .+..++.+. .....+. ...
T Consensus 302 G~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (659)
T PLN03211 302 GFSPSFPMNPADFLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEH 377 (659)
T ss_pred CCCCCCCCCHHHHHHHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhccccccc
Confidence 999999999999999988653211000000000 112233344432111 111111000 0000000 000
Q ss_pred hhhcccccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCcccCccchhhHHHHHHHHHHH
Q 000838 312 ALAKKVYGVGKRELLKACFSREFLLMKRNSFVYIFKLVQIAITALVTMTLFFRTKMKKDSVADGGVYAGVMFFAIVIVMF 391 (1262)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~r~~~~~~r~~~~~~~~~~~~~i~~l~~g~lf~~~~~~~~~~~~~~~~~g~lf~~~~~~~~ 391 (1262)
...+..+..+++.|+..+++|.++. +|++.+...++++.+++++++|++||+.+ ..+.+.+.|++|+.+++..+
T Consensus 378 ~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~ 451 (659)
T PLN03211 378 RSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGV 451 (659)
T ss_pred ccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHH
Confidence 0011224567899999999999888 78888888999999999999999999642 23456788999988777554
Q ss_pred -HHHHHHHHhhhccceeeecccCCCCCchhHHHHHHHHHhhHHHHHHHHhhheeeeeeccccChhhHHHHHHHHHHHHHH
Q 000838 392 -NGYAEISMTIVKIPVFYKQRDLQFFPPWAYALPTWILKIPISFVEVVVWVFVSYYVIGYDPNAGRFFKQYFLLLAVNQM 470 (1262)
Q Consensus 392 -~~~~~~~~~~~~~~v~~rer~~~~y~~~~~~l~~~l~~lp~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~ 470 (1262)
..+..+..+..+|++++|||.+++|++.+|++++.+.++|+.++.+++|.+|+|||+|+++++++|+.|++++++..++
T Consensus 452 ~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~ 531 (659)
T PLN03211 452 FPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLV 531 (659)
T ss_pred HHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHH
Confidence 5567777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccCcCCcccchhhhhhhCHHHHHHHHHHHhhcCCCcc-----ccc
Q 000838 471 ACALFRFIAATGRNMVVANTFGTVALLVLFALGGFLLSREDIKKWWIWGYWCSPLMYAQNAIVANEFLGHSW-----RKF 545 (1262)
Q Consensus 471 ~~~~~~~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~~sp~~y~~~~~~~nef~~~~~-----~~~ 545 (1262)
+.+++.+++++++++.+|+.+++++.+++++|+||+++ ++|+||+|++|+||++|++++++.|||.+... .|.
T Consensus 532 ~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~ 609 (659)
T PLN03211 532 SQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCS 609 (659)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCC
Confidence 99999999999999999999999999999999999997 79999999999999999999999999976432 332
Q ss_pred CCCCCCcchHHHhhhcCccCCCcchhHhHHHHHHHHHHHHHHHHHHHHhh
Q 000838 546 TPDSNEPLGVQVLKSRGFFPDAYWYWLGLGALFGFVLLLHIAFTLALTFL 595 (1262)
Q Consensus 546 ~~~~~~~~g~~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~l~~~ 595 (1262)
.+......+..++....+. ....|.+++++++++++++++.+++|++.
T Consensus 610 ~~~~~~~~~c~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 610 LPHGSDRASCKFVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred CcccCCCCCCccchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2111011111122222222 22467888999999999999999888653
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7e-71 Score=680.34 Aligned_cols=760 Identities=22% Similarity=0.273 Sum_probs=396.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc---cceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
.+||+|||||||||++++|.++++|+ +|+|.+||.|+.+.+. +.++|.|.|+|.+| ..||+|||.|+....
T Consensus 381 ~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePvlF-~~tI~eNI~~G~~da-- 454 (1228)
T KOG0055|consen 381 TVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLF-ATTIRENIRYGKPDA-- 454 (1228)
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechhhh-cccHHHHHhcCCCcc--
Confidence 37999999999999999999999998 9999999999987654 57899999999766 679999999965321
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
..+...+++ +.++..--...|++.+||.||++.+. ||||||||++|||
T Consensus 455 --t~~~i~~a~-----------------------------k~ana~~fi~~lp~g~~T~vge~g~q-LSGGQKQRIAIAR 502 (1228)
T KOG0055|consen 455 --TREEIEEAA-----------------------------KAANAHDFILKLPDGYDTLVGERGVQ-LSGGQKQRIAIAR 502 (1228)
T ss_pred --cHHHHHHHH-----------------------------HHccHHHHHHhhHHhhcccccCCCCC-CChHHHHHHHHHH
Confidence 111111111 11223334556899999999987764 9999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHHH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFF 237 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~~ 237 (1262)
||+.||+|||||||||+||+++.+.|.+.|.+.. .|+|+|+ ++|..+.+.+ +|+|++|++|+|++.|+++|+.+.
T Consensus 503 alv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRLStIrn-aD~I~v~~~G~IvE~G~h~ELi~~- 577 (1228)
T KOG0055|consen 503 ALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRLSTIRN-ADKIAVMEEGKIVEQGTHDELIAL- 577 (1228)
T ss_pred HHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeehhhhhc-cCEEEEEECCEEEEecCHHHHHhc-
Confidence 9999999999999999999999999999998753 4667665 6777777665 999999999999999999999752
Q ss_pred HhCCCCCCCCCChhhHHhhhcCchhhhhhhhhcCCCCCcCCHHHHHHHHhchhhhHHHHHHhcCCCCCchh--hHhhhhc
Q 000838 238 ESMGFKCPQRKGVADFLQEVTSKKDQQQYWAHKEIPYRFITVQEFAEAFKSFHVGQKLADELRIPFDKSQS--HRAALAK 315 (1262)
Q Consensus 238 ~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 315 (1262)
. +...-+.........++. .+.+.. ..++.....+.+. .............. .......
T Consensus 578 ---------~-G~Y~~lv~~Q~~~~~~~~-~~~~~~----~~~~~~~s~~~s~----~~~~~~~~~~~~~~~~~~~~~e~ 638 (1228)
T KOG0055|consen 578 ---------G-GIYSSLVRLQELEKAAED-EEEEES----LKEERSRSLKSSS----SSPSLSRGSNRSNLLSVKPEGED 638 (1228)
T ss_pred ---------c-chHHHHHHHHhhhhhhhc-cccccc----hhhhhhhcccccc----ccccccCCccccccccccccccc
Confidence 1 222212211111100000 000000 0000000000000 00000000000000 0000000
Q ss_pred ccccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH-------HHHh---hccccCCCCcccCccchhhHHHHH
Q 000838 316 KVYGVGKRELLKACFSREFLLMKRNSFVYIFKLVQIAITALV-------TMTL---FFRTKMKKDSVADGGVYAGVMFFA 385 (1262)
Q Consensus 316 ~~~~~~~~~~~~~l~~r~~~~~~r~~~~~~~~~~~~~i~~l~-------~g~l---f~~~~~~~~~~~~~~~~~g~lf~~ 385 (1262)
..... ..+..+..+.|-++..++++.++++..+.+++.|.. ++.+ |+..+. +........++++|..
T Consensus 639 ~~~~~-~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~--~~~~~~~~~~al~f~~ 715 (1228)
T KOG0055|consen 639 PEEPV-SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDD--DELKREVRAWALIFLG 715 (1228)
T ss_pred ccccc-ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCh--HHHHHHHHHHHHHHHH
Confidence 00000 000022334455566667777777766655554432 2222 221111 1111112224454444
Q ss_pred HHHHHHHH--HHHHHHhhhccceeeec----------ccCCCCCchhHHHHHHHHHhhHHHHHHHHhhheeeeeeccccC
Q 000838 386 IVIVMFNG--YAEISMTIVKIPVFYKQ----------RDLQFFPPWAYALPTWILKIPISFVEVVVWVFVSYYVIGYDPN 453 (1262)
Q Consensus 386 ~~~~~~~~--~~~~~~~~~~~~v~~re----------r~~~~y~~~~~~l~~~l~~lp~~~~~~~i~~~i~Y~~~gl~~~ 453 (1262)
+....+.. ............+..|- ++..||.-.-.. +....++. .+
T Consensus 716 l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa--------------------~D 774 (1228)
T KOG0055|consen 716 LGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLA--------------------TD 774 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHh--------------------cc
Confidence 43322211 11111111111111111 112222111111 11111110 00
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH------HHHhccccCcCCcccchhhhhhhC---H
Q 000838 454 AGRFFKQYFLLLAVNQMACALFRFIAATGRNMVVANTFGTVALLVL------FALGGFLLSREDIKKWWIWGYWCS---P 524 (1262)
Q Consensus 454 ~~~f~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~a~~~~~~~~~~~------~l~~G~~i~~~~i~~~~~w~~~~s---p 524 (1262)
+.. +--++......+...+++......+|..++|-+.++. +..+++... +++...+ -
T Consensus 775 a~~------vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~--------~~~~~~~~~~~ 840 (1228)
T KOG0055|consen 775 ASN------VRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQK--------KFLKGFSKDDK 840 (1228)
T ss_pred hHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHhhhhHHHH
Confidence 000 0001111112222223333333334444443332222 222222110 0000000 0
Q ss_pred HHHHHHHHHHhhcCCCcccccCCCCCCcchHHHhhhcCc-----cCCCc--chhHhHHHHHHHHHHHHHHHHHHHHhhcc
Q 000838 525 LMYAQNAIVANEFLGHSWRKFTPDSNEPLGVQVLKSRGF-----FPDAY--WYWLGLGALFGFVLLLHIAFTLALTFLNR 597 (1262)
Q Consensus 525 ~~y~~~~~~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~-----~~~~~--~~~~~~~~l~~~~~~~~i~~~~~l~~~~~ 597 (1262)
-.|.-.+.+.+|-...-.+... .+....+++.+.- ..... -.|.++ .+++...+... ..++.|+..
T Consensus 841 ~~~~ea~~iA~eai~NIrTV~a----l~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl--~f~~sqs~~~~-~~A~~f~~G 913 (1228)
T KOG0055|consen 841 KAYEEASKIAIEAVSNIRTVAA----LCAEEKFMELYKEELEKPRKSSFKRGLISGL--GFGFSQSLLFF-VYALSFWYG 913 (1228)
T ss_pred HHHHHHHHHHHHHHHhHHHHHH----HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH-HHHHHHHHh
Confidence 0111112222221110000000 0000111111000 00000 112222 22222111111 111222221
Q ss_pred cccccccccccccCCCCCCcccccccccchhhhcccccccccccCCCCCcccccCCCCCccCCCCCCcccchhcccCCCc
Q 000838 598 GYLYHLHFNYFKSKFDKPQAVITEDSERDEQDTKIRGTVELSTLGSSSSLTTRSESGGDIWGRNSSSQSLSMTEAAGGVI 677 (1262)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (1262)
..+.......+...+.......... ..... ..+..+.......+++.++... ++ ....
T Consensus 914 ~~Li~~g~~~~~~~~~vf~~l~~ta-------~~~~~-----~~s~~Pd~~ka~~Aa~~iF~i~------dr----~~~i 971 (1228)
T KOG0055|consen 914 ARLISNGEMTFEDVFRVFMALSFTA-------MALGQ-----ASSYAPDISKAKIAAGSIFEIL------DR----KPTI 971 (1228)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHHHH-------HHHHH-----HHhhCcHHHHHHHHHHHHHHHh------cC----CCCC
Confidence 1111100000000000000000000 00000 0000000000000000000000 00 0001
Q ss_pred ccc-cCCCCCCCCCcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC
Q 000838 678 QPK-KRGMVLPFEPHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT 756 (1262)
Q Consensus 678 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~ 756 (1262)
+.+ ..+...|.-...++++|+++.|+.. ++..||+|+|+++++|+.+||+|||||||||.+.+|-+...
T Consensus 972 ~~~~~~~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd 1041 (1228)
T KOG0055|consen 972 DPDSTSGGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD 1041 (1228)
T ss_pred CCCCCCCCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC
Confidence 111 1122233344679999999999754 35679999999999999999999999999999999998765
Q ss_pred CCeeEEEEEECCccCCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH-------
Q 000838 757 GGYITGSIKISGYPKKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMEL------- 826 (1262)
Q Consensus 757 ~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~------- 826 (1262)
+..|.|.+||.+++. ...|+++|.|.|+|.++. -|++||+.|+. .+.+.++ +.++++.
T Consensus 1042 --p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~e----Ii~Aak~ANaH~FI 1109 (1228)
T KOG0055|consen 1042 --PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEEE----IIEAAKLANAHNFI 1109 (1228)
T ss_pred --CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHHH----HHHHHHHhhhHHHH
Confidence 568999999998754 467889999999999986 79999999971 1234333 3344443
Q ss_pred cCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCH
Q 000838 827 VELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 906 (1262)
Q Consensus 827 l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~ 906 (1262)
.+|.+-.|+.+|..+ .+||||||||++||||+++||+||||||+||.||+++.+.+++.|++.. .|+|.|+++|+++
T Consensus 1110 ~sLP~GyDT~vGerG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS- 1186 (1228)
T KOG0055|consen 1110 SSLPQGYDTRVGERG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS- 1186 (1228)
T ss_pred hcCcCcccCccCccc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh-
Confidence 356677899999754 4799999999999999999999999999999999999999999999874 6899999999876
Q ss_pred HHHHHhhhh
Q 000838 907 DIFESFDEA 915 (1262)
Q Consensus 907 ~~~~~fd~~ 915 (1262)
.....|..
T Consensus 1187 -TIqnaD~I 1194 (1228)
T KOG0055|consen 1187 -TIQNADVI 1194 (1228)
T ss_pred -hhhcCCEE
Confidence 56666763
No 14
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.9e-69 Score=682.14 Aligned_cols=763 Identities=21% Similarity=0.259 Sum_probs=443.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
++||+||.||||||||.+|.|+++.. +|+|.++| .++||+|++++ .+.||||||.||..+. .++
T Consensus 549 lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI-~ngTvreNILFG~~~d--~~r 612 (1381)
T KOG0054|consen 549 LVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWI-QNGTVRENILFGSPYD--EER 612 (1381)
T ss_pred EEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHh-hCCcHHHhhhcCcccc--HHH
Confidence 48999999999999999999999865 99999999 59999999955 5789999999998765 368
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
|+.+.++|..+++.+.+|.+| .|.||++++ +||||||||+++|||++
T Consensus 613 Y~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGErGi-nLSGGQKqRIsLARAVY 659 (1381)
T KOG0054|consen 613 YDKVIKACALKKDLEILPFGD--------------------------------LTEIGERGI-NLSGGQKQRISLARAVY 659 (1381)
T ss_pred HHHHHHHccCHhHHhhcCCCC--------------------------------cceecCCcc-CCcHhHHHHHHHHHHHh
Confidence 999999998888877666655 466887665 79999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHH-HHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH---H
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVN-CLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE---F 236 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~-~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~---~ 236 (1262)
+|++|++||+|.|++|+++..++++ +++.. .+++|+| .+|| ..+..+.+|+|++|++|+|.+.|+.+++.+ .
T Consensus 660 ~~adIYLLDDplSAVDahvg~~if~~ci~~~--L~~KT~I-LVTH-ql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~ 735 (1381)
T KOG0054|consen 660 QDADIYLLDDPLSAVDAHVGKHIFEECIRGL--LRGKTVI-LVTH-QLQFLPHADQIIVLKDGKIVESGTYEELLKSGGD 735 (1381)
T ss_pred ccCCEEEEcCcchhhhHhhhHHHHHHHHHhh--hcCCEEE-EEeC-chhhhhhCCEEEEecCCeEecccCHHHHHhcchh
Confidence 9999999999999999999999995 77654 2345544 4666 577888999999999999999999999874 1
Q ss_pred HHhCCCCCCCCCChhhHHhhhcCchhhhhhhhhcCCCCCcCCHHHHHHHHhchhhhHHHHHHhcCCCCCchhhH-hhhhc
Q 000838 237 FESMGFKCPQRKGVADFLQEVTSKKDQQQYWAHKEIPYRFITVQEFAEAFKSFHVGQKLADELRIPFDKSQSHR-AALAK 315 (1262)
Q Consensus 237 ~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 315 (1262)
|+++ ..+... +.+.. ...+.+......... +. +... ..+..++.....+..+.+. ....+
T Consensus 736 ~~~l-------------~~~~~~--~~~~~-~~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ee~ 796 (1381)
T KOG0054|consen 736 FAEL-------------AHEEES--EQEEE-ASEKDLESGESSRES-ES-RSLE-SLSSEEEKSKDEKEEEDKLVQEEER 796 (1381)
T ss_pred HHHH-------------hhccch--hhccc-cccccccccccccch-hh-hhhh-hhcccccccccccchhhHHHHHHHH
Confidence 2221 000000 00000 000000000000000 00 0000 0000000000000000000 00001
Q ss_pred ccccccHHHHHHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHHHHHhhc---cccCCCCcc---cCcc----chhhHHHH
Q 000838 316 KVYGVGKRELLKACFSREFLLMKRNSF-VYIFKLVQIAITALVTMTLFF---RTKMKKDSV---ADGG----VYAGVMFF 384 (1262)
Q Consensus 316 ~~~~~~~~~~~~~l~~r~~~~~~r~~~-~~~~~~~~~~i~~l~~g~lf~---~~~~~~~~~---~~~~----~~~g~lf~ 384 (1262)
+.-.+++ ..++ ++++. ..... ..++-+...+..+..+++-|| +++...... .+.. .|..+.+.
T Consensus 797 ~~G~v~~-~vY~----~Y~~a-~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~ 870 (1381)
T KOG0054|consen 797 ETGKVSW-SVYK----KYIKA-AGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVA 870 (1381)
T ss_pred hcCEeeH-HHHH----HHHHh-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHH
Confidence 1112222 1111 11111 11111 111112222222222222222 222111111 1222 22222222
Q ss_pred HHHHHHHHHHHHHHHhhhccceeeecccCCCCCchhHHHHHHHHHhhHHHHHHHHhhheeeeeeccccChhhHHHHH---
Q 000838 385 AIVIVMFNGYAEISMTIVKIPVFYKQRDLQFFPPWAYALPTWILKIPISFVEVVVWVFVSYYVIGYDPNAGRFFKQY--- 461 (1262)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~v~~rer~~~~y~~~~~~l~~~l~~lp~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~--- 461 (1262)
..++..+.++.....++.....++. -+.+.+.+.|+.|++.. ..+|.++.+
T Consensus 871 ~~~~~~~rs~~~~~~~l~aS~~Lh~------------~ml~~Ilrapm~FFdtT--------------P~GRILNRFSkD 924 (1381)
T KOG0054|consen 871 SSLLTLLRSFLFAKGGLKASRKLHD------------KLLNSILRAPMSFFDTT--------------PTGRILNRFSKD 924 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHhCcchhcCCC--------------Cccchhhhcccc
Confidence 2233333333222222222111111 13344555666665542 223333322
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccCcCCcccchhhhhhhCHHHHHHHH
Q 000838 462 ----------FLLLAVNQMACALFRFIAATGRNMVVANTFGTVALLVLFALGGFLLSREDIKKWWIWGYWCSPLMYAQNA 531 (1262)
Q Consensus 462 ----------~~~~~~~~~~~~~~~~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~~sp~~y~~~~ 531 (1262)
.+...+......++.++.....++.+.....++..+.+++..-|....+++++ .--...||+.-.+..
T Consensus 925 ~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkR--LesitRSPi~sh~~E 1002 (1381)
T KOG0054|consen 925 IDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKR--LESITRSPIYSHFSE 1002 (1381)
T ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--hhhcccchHHHhHHH
Confidence 11112222222222333333445566666666666666666666666666554 334456888877776
Q ss_pred HHHhhcCCCcccccCCCCCCcchHHHhhhcC------c--cCCCcchhHhHHHHHHHHHHHHHHHHHHHHhh-ccccccc
Q 000838 532 IVANEFLGHSWRKFTPDSNEPLGVQVLKSRG------F--FPDAYWYWLGLGALFGFVLLLHIAFTLALTFL-NRGYLYH 602 (1262)
Q Consensus 532 ~~~nef~~~~~~~~~~~~~~~~g~~~L~~~~------~--~~~~~~~~~~~~~l~~~~~~~~i~~~~~l~~~-~~~~~~~ 602 (1262)
-+..--..+.+.... ..-..+....+ | .....|....+..+..+++++..+..+...-. ......+
T Consensus 1003 tl~GlsTIRAf~~~~-----rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vG 1077 (1381)
T KOG0054|consen 1003 TLQGLSTIRAFGKEE-----RFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVG 1077 (1381)
T ss_pred HhcCcceeeeccccH-----HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHH
Confidence 664433333222110 00000000000 0 00112333333333333222222222111111 1123444
Q ss_pred ccccccccCCCCCCcccccccccchhhhcccccccccccCCCCCcccccCCCCCccCCCCCCcccchhcccCCCcccccC
Q 000838 603 LHFNYFKSKFDKPQAVITEDSERDEQDTKIRGTVELSTLGSSSSLTTRSESGGDIWGRNSSSQSLSMTEAAGGVIQPKKR 682 (1262)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1262)
+...|...-.+..++.+....+.++++.+.++..++.+.+.+.+.......++.
T Consensus 1078 Lslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~-------------------------- 1131 (1381)
T KOG0054|consen 1078 LSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPP-------------------------- 1131 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCC--------------------------
Confidence 444444444444455555555666667777777777665433111100000111
Q ss_pred CCCCCCCCcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEE
Q 000838 683 GMVLPFEPHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITG 762 (1262)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G 762 (1262)
..| ....++|+|++.+|+. +...+|||||++|+|||.+||+|++|||||||+++|.+..+ +.+|
T Consensus 1132 --~WP-~~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G 1195 (1381)
T KOG0054|consen 1132 --SWP-SKGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEG 1195 (1381)
T ss_pred --CCC-CCCeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCC
Confidence 122 2358999999988853 23469999999999999999999999999999999999876 4589
Q ss_pred EEEECCccCCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccccccccc-
Q 000838 763 SIKISGYPKKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVG- 838 (1262)
Q Consensus 763 ~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~- 838 (1262)
+|.|||.++.. .+.|++++.+||||.++. -|+|.||. +..+..++.++++|+..+|.+...+..+
T Consensus 1196 ~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFs-GTvR~NLD----------Pf~e~sD~~IW~ALe~~~Lk~~v~~~p~~ 1264 (1381)
T KOG0054|consen 1196 EILIDGVDISKIGLHDLRSRLSIIPQDPVLFS-GTVRFNLD----------PFDEYSDDEIWEALERCQLKDVVSSLPGG 1264 (1381)
T ss_pred eEEEcCeecccccHHHHHhcCeeeCCCCceec-CccccccC----------cccccCHHHHHHHHHHhChHHHHhhCCcC
Confidence 99999998754 467889999999999986 58888774 3334455668999999888765433322
Q ss_pred -----CCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhh
Q 000838 839 -----LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFD 913 (1262)
Q Consensus 839 -----~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd 913 (1262)
.+++.++|-||||.+|+||||+++++||+|||+|+++|++|...|+++||+..+ ++|||.+.|+.+ ..-..|
T Consensus 1265 Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~--TVmd~D 1341 (1381)
T KOG0054|consen 1265 LDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLN--TVMDSD 1341 (1381)
T ss_pred CCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccc--hhhhcC
Confidence 235678999999999999999999999999999999999999999999999764 799999999876 444677
Q ss_pred hhc-CCcccCCCCCCchh
Q 000838 914 EAI-PGIEKIKNGYNPAT 930 (1262)
Q Consensus 914 ~~~-~~~~~~~~~~npad 930 (1262)
+++ -.-.++.+...|++
T Consensus 1342 rVlVld~G~v~EfdsP~~ 1359 (1381)
T KOG0054|consen 1342 RVLVLDAGRVVEFDSPAE 1359 (1381)
T ss_pred eEEEeeCCeEeecCChHH
Confidence 753 11124556666654
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.1e-66 Score=683.35 Aligned_cols=203 Identities=27% Similarity=0.400 Sum_probs=174.9
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.++. +.+.+|+|||+.|++||++||+||||||||||+|+|+|... +.+|+|.++|.+
T Consensus 1936 ~~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~ 2002 (2272)
T TIGR01257 1936 DILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKS 2002 (2272)
T ss_pred ceEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEE
Confidence 35789999887741 12579999999999999999999999999999999999877 458999999988
Q ss_pred CCc--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 771 KKH--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 771 ~~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
... ...++.+|||+|++.+++.+|++|++.+.+.++. .+.++.++.++++++.+||.+.+|+.++ .||||
T Consensus 2003 i~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGG 2074 (2272)
T TIGR01257 2003 ILTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGG 2074 (2272)
T ss_pred CcchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHH
Confidence 642 2345679999999999999999999998776653 2334445668899999999988888754 79999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||++||+||+.+|+|++|||||+|||+.+++.+++.|++++++|+|||++||++. ++...+|++
T Consensus 2075 qKqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV 2140 (2272)
T TIGR01257 2075 NKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRL 2140 (2272)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEE
Confidence 999999999999999999999999999999999999999999878999999999975 566778874
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.4e-62 Score=660.89 Aligned_cols=198 Identities=23% Similarity=0.304 Sum_probs=165.3
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..++|+|++++|+. +.+.+|+|+|++|+|||++||+||||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 46999999999852 12359999999999999999999999999999999999877 458999999998
Q ss_pred CCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000838 771 KKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 840 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 840 (1262)
+.. ..+|+.+++|||++.++.. |++|||.+.. ..+ ++.++++++..++.+. .|+.+|.
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge- 1370 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSE- 1370 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccC-
Confidence 753 4678899999999999875 9999997531 122 2336777887777543 4555554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|+|+++|+++ ....+|+++
T Consensus 1371 ~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIl 1443 (1622)
T PLN03130 1371 AGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRIL 1443 (1622)
T ss_pred CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEE
Confidence 345799999999999999999999999999999999999999999999875 4899999999875 556789854
No 17
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.6e-61 Score=561.35 Aligned_cols=445 Identities=26% Similarity=0.324 Sum_probs=335.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC-CceeEEEEECCccCCCCcc-------cceEEeecccc--CCCCCCCHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSS-LKVSGRVTYNGHNMGEFVP-------QRTAAYISQHD--NHIGEMTVRETLAF 70 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~-~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~--~~~~~lTv~e~l~f 70 (1262)
+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++|++|++ .+-|.+||.+.|.-
T Consensus 37 ~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E 116 (539)
T COG1123 37 ILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIRE 116 (539)
T ss_pred EEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHH
Confidence 47999999999999999999999876 3468999999997754322 36899999995 46677899999987
Q ss_pred HHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccc
Q 000838 71 SARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQK 150 (1262)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqk 150 (1262)
..+.++.. ..+++++++.++|+.+||++.... +++++.||||||
T Consensus 117 ~~~~h~~~---------------------------------~~~ea~~~a~elL~~Vgl~~~~~~---~~yPheLSGG~r 160 (539)
T COG1123 117 ALRLHGKG---------------------------------SRAEARKRAVELLEQVGLPDPERR---DRYPHQLSGGMR 160 (539)
T ss_pred HHHHhccc---------------------------------cHHHHHHHHHHHHHHcCCCChhhh---ccCCcccCchHH
Confidence 76654311 123355677889999999986653 579999999999
Q ss_pred hhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 151 KRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 151 qRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
|||.||+||+.+|++|++||||++||+.++.+|++.|+++.+ +.++.++++|||...+.++||||+||++|++++.|++
T Consensus 161 QRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~-e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~ 239 (539)
T COG1123 161 QRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQR-ELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPT 239 (539)
T ss_pred HHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHH-HcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCH
Confidence 999999999999999999999999999999999999999875 4567888899999999999999999999999999999
Q ss_pred chHHHHHHhCCCCCCCCCChhhHHhhhcCchhhhhhhhhcCCCCCcCCHHHHHHHHhchhhhHHHHHHhcCCCCCchhhH
Q 000838 231 ELVLEFFESMGFKCPQRKGVADFLQEVTSKKDQQQYWAHKEIPYRFITVQEFAEAFKSFHVGQKLADELRIPFDKSQSHR 310 (1262)
Q Consensus 231 ~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (1262)
+++.+. |.+..+...+..+.
T Consensus 240 ~~i~~~--------p~hpYT~~Ll~a~p---------------------------------------------------- 259 (539)
T COG1123 240 EEILSN--------PQHPYTRGLLAAVP---------------------------------------------------- 259 (539)
T ss_pred HHHHhc--------cCCcccHHHHhhCC----------------------------------------------------
Confidence 987541 11110000000000
Q ss_pred hhhhcccccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCcccCccchhhHHHHHHHHHH
Q 000838 311 AALAKKVYGVGKRELLKACFSREFLLMKRNSFVYIFKLVQIAITALVTMTLFFRTKMKKDSVADGGVYAGVMFFAIVIVM 390 (1262)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~l~~r~~~~~~r~~~~~~~~~~~~~i~~l~~g~lf~~~~~~~~~~~~~~~~~g~lf~~~~~~~ 390 (1262)
.........
T Consensus 260 -------------------------------------------------------~~~~~~~~~---------------- 268 (539)
T COG1123 260 -------------------------------------------------------RLGDEKIIR---------------- 268 (539)
T ss_pred -------------------------------------------------------Ccccccccc----------------
Confidence 000000000
Q ss_pred HHHHHHHHHhhhccceeeecccCCCCCchhHHHHHHHHHhhHHHHHHHHhhheeeeeeccccChhhHHHHHHHHHHHHHH
Q 000838 391 FNGYAEISMTIVKIPVFYKQRDLQFFPPWAYALPTWILKIPISFVEVVVWVFVSYYVIGYDPNAGRFFKQYFLLLAVNQM 470 (1262)
Q Consensus 391 ~~~~~~~~~~~~~~~v~~rer~~~~y~~~~~~l~~~l~~lp~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~ 470 (1262)
T Consensus 269 -------------------------------------------------------------------------------- 268 (539)
T COG1123 269 -------------------------------------------------------------------------------- 268 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccCcCCcccchhhhhhhCHHHHHHHHHHHhhcCCCcccccCCCCC
Q 000838 471 ACALFRFIAATGRNMVVANTFGTVALLVLFALGGFLLSREDIKKWWIWGYWCSPLMYAQNAIVANEFLGHSWRKFTPDSN 550 (1262)
Q Consensus 471 ~~~~~~~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~~sp~~y~~~~~~~nef~~~~~~~~~~~~~ 550 (1262)
T Consensus 269 -------------------------------------------------------------------------------- 268 (539)
T COG1123 269 -------------------------------------------------------------------------------- 268 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcchHHHhhhcCccCCCcchhHhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCCcccccccccchhhh
Q 000838 551 EPLGVQVLKSRGFFPDAYWYWLGLGALFGFVLLLHIAFTLALTFLNRGYLYHLHFNYFKSKFDKPQAVITEDSERDEQDT 630 (1262)
Q Consensus 551 ~~~g~~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (1262)
.. .
T Consensus 269 -----------------------------------------------------------------------~~-~----- 271 (539)
T COG1123 269 -----------------------------------------------------------------------LP-R----- 271 (539)
T ss_pred -----------------------------------------------------------------------cc-c-----
Confidence 00 0
Q ss_pred cccccccccccCCCCCcccccCCCCCccCCCCCCcccchhcccCCCcccccCCCCCCCCCcEEEEeeeEEEEecchhhhh
Q 000838 631 KIRGTVELSTLGSSSSLTTRSESGGDIWGRNSSSQSLSMTEAAGGVIQPKKRGMVLPFEPHSLIFDEVTYSVDMPQEMKL 710 (1262)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1262)
. .. .+ ....+.++|++..+..++.+-
T Consensus 272 --~-----------~~---------------------------------------~~-~~~ll~V~~l~k~y~~~~~~~- 297 (539)
T COG1123 272 --R-----------GP---------------------------------------LR-AEPLLSVRNLSKRYGSRKGLF- 297 (539)
T ss_pred --c-----------cc---------------------------------------cc-cCceeEeeeeeeeeccccccc-
Confidence 0 00 00 001233444444443221110
Q ss_pred ccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC--Cc---ccccceEEEecC
Q 000838 711 QGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK--KH---ETFARISGYCEQ 785 (1262)
Q Consensus 711 ~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~--~~---~~~~~~~~~v~q 785 (1262)
+...+...+++||||++++||++||+|+||||||||.++|+|...+ .+|.|.++|.+. +. ...++.+-+++|
T Consensus 298 -~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQ 374 (539)
T COG1123 298 -VRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQ 374 (539)
T ss_pred -cccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEe
Confidence 0012345689999999999999999999999999999999998874 589999999762 11 223456667777
Q ss_pred CC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000838 786 ND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVNGLSTEQRKRLTIAVELVAN 862 (1262)
Q Consensus 786 ~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~ 862 (1262)
++ .+.|.+||++.+.-........ ...++++++.++++.+||.+ ..+++ +.+||||||||++|||||+.+
T Consensus 375 dp~~SLnPr~tV~~~i~epL~~~~~~--~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~ 447 (539)
T COG1123 375 DPYSSLNPRMTVGDILAEPLRIHGGG--SGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALE 447 (539)
T ss_pred CcccccCccccHHHHHHhHHhhhccc--chHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcC
Confidence 75 5789999999998876554332 24566778999999999986 34544 568999999999999999999
Q ss_pred CCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 863 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 863 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|++|++|||||.||+..+.++.+.|+++.++ |.|.|++|||.+ -+-...|++
T Consensus 448 P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv 500 (539)
T COG1123 448 PKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLA-VVRYIADRV 500 (539)
T ss_pred CCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceE
Confidence 9999999999999999999999999999876 999999999975 244566664
No 18
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.1e-61 Score=647.99 Aligned_cols=198 Identities=22% Similarity=0.296 Sum_probs=165.0
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..++|+|++++|+. +.+.+|+|+|++|+|||.+||+||||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 46999999999842 12469999999999999999999999999999999999877 458999999998
Q ss_pred CCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000838 771 KKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 840 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 840 (1262)
+.. ..+|+.++||||++.+++. |++|||.+.. +.+ ++.++++++..++.+. .|+.+|.
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e- 1367 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSE- 1367 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecC-
Confidence 643 4678899999999999874 9999997531 122 2336778887777643 3455554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|+|+++|+++ ....+|+++
T Consensus 1368 ~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIl 1440 (1495)
T PLN03232 1368 GGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKIL 1440 (1495)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEE
Confidence 345799999999999999999999999999999999999999999999875 4899999999874 566789864
No 19
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.8e-61 Score=648.14 Aligned_cols=198 Identities=19% Similarity=0.213 Sum_probs=165.3
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..++|+|++++|+.. ...+|+|||++|+|||++||+||||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 479999999998531 2359999999999999999999999999999999999876 458999999998
Q ss_pred CCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000838 771 KKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 840 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 840 (1262)
+.. ..+|+.+++|||++.+++. |++|||.... +.++ +.++++++..++.+. .|+.+|.
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~sd----eei~~al~~a~l~~~I~~lp~GLdt~v~e- 1417 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYSD----EEVWWALELAHLKTFVSALPDKLDHECAE- 1417 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCCH----HHHHHHHHHcCcHHHHhhCccCCCceecC-
Confidence 753 4678899999999999985 9999996211 1222 336778888877643 3555554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..+||||||||++|||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+++
T Consensus 1418 ~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIl 1490 (1522)
T TIGR00957 1418 GGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVI 1490 (1522)
T ss_pred CCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEE
Confidence 345799999999999999999999999999999999999999999999875 4899999999874 567789864
No 20
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.2e-60 Score=632.16 Aligned_cols=203 Identities=19% Similarity=0.294 Sum_probs=168.0
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC------------
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 758 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~------------ 758 (1262)
..++|+|++++|+.. +++.+|+|+||+++||+.+||+||||||||||+++|.|...+.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 469999999998531 1246999999999999999999999999999999999976641
Q ss_pred ----------------------------------------eeEEEEEECCccCC---cccccceEEEecCCCCCCCCCCH
Q 000838 759 ----------------------------------------YITGSIKISGYPKK---HETFARISGYCEQNDIHSPFVTV 795 (1262)
Q Consensus 759 ----------------------------------------~~~G~i~~~g~~~~---~~~~~~~~~~v~q~~~~~~~lTv 795 (1262)
+.+|+|++||.++. ...+++.+|||+|++.+++ .|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccH
Confidence 14899999999864 3467889999999999985 899
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcce
Q 000838 796 HESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-------LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 868 (1262)
Q Consensus 796 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illl 868 (1262)
+|||.++. ++.+.+ .++++++..++.+ -.|+.+|. ....||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~-----~~at~e----eI~~A~k~A~l~~fI~~LP~GydT~VGe-~G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDATRE----DVKRACKFAAIDEFIESLPNKYDTNVGP-YGKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCCHH----HHHHHHHHcCCHHHHHhCccccCCccCC-CCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999852 223332 3666777666543 45777874 3457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 869 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 869 DEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||+||+.+++.|++.|+++. .+++|+|+++|+++ ....+|+++
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Iv 1429 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIV 1429 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEE
Confidence 99999999999999999999986 35899999999874 667888864
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-60 Score=578.50 Aligned_cols=192 Identities=23% Similarity=0.369 Sum_probs=156.2
Q ss_pred eEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEecCCC---CCC
Q 000838 718 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH----ETFARISGYCEQND---IHS 790 (1262)
Q Consensus 718 ~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~ 790 (1262)
+.+|+|+||++++||+++|+||||||||||+++|+|..++ +.+|+|.++|.+... ...++.++|++|++ .++
T Consensus 275 ~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 353 (506)
T PRK13549 275 IKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIV 353 (506)
T ss_pred cccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCc
Confidence 3589999999999999999999999999999999998652 247999999976532 12345689999985 467
Q ss_pred CCCCHHHHHHHHHHhhcCC--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 000838 791 PFVTVHESLAFSAWLRLAP--EVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIF 867 (1262)
Q Consensus 791 ~~lTv~e~l~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~ill 867 (1262)
+.+|+.||+.+........ ..+.+..++.++++++.+++. +..++.+ ..||||||||++||+||+.+|++|+
T Consensus 354 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lll 428 (506)
T PRK13549 354 PVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILI 428 (506)
T ss_pred CCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEE
Confidence 8899999998753211110 012233445688999999996 4666654 4799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 868 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 868 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||+|||+.++..+++.|++++++|+|||++|||+. ++.+.+|+++
T Consensus 429 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~ 476 (506)
T PRK13549 429 LDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVL 476 (506)
T ss_pred EcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEE
Confidence 99999999999999999999999888999999999975 5667788753
No 22
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-59 Score=584.01 Aligned_cols=212 Identities=20% Similarity=0.194 Sum_probs=167.8
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+...... .......+.+|+||||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 313 ~L~~~~l~~~y~~~~~~--~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i 388 (623)
T PRK10261 313 ILQVRNLVTRFPLRSGL--LNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRI 388 (623)
T ss_pred eEEEeeeEEEEcCCCcc--ccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEEC
Confidence 46788888777421000 0000012469999999999999999999999999999999999876 4589999999875
Q ss_pred Cc------ccccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000838 772 KH------ETFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGV 842 (1262)
Q Consensus 772 ~~------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 842 (1262)
.. ..+++.++|++|++ .+++.+||.|++.+....+. ....++.++++.++++.+||. +..++. +
T Consensus 389 ~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~ 461 (623)
T PRK10261 389 DTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----P 461 (623)
T ss_pred CcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----c
Confidence 32 12356799999997 57889999999987654321 112334456688999999996 455665 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
.+|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|++++++ |.|||++|||++ .+....|++
T Consensus 462 ~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri 534 (623)
T PRK10261 462 HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRV 534 (623)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 579999999999999999999999999999999999999999999999765 899999999975 456677874
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-60 Score=578.58 Aligned_cols=189 Identities=22% Similarity=0.338 Sum_probs=154.7
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEecCC---CCCCCC
Q 000838 720 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH----ETFARISGYCEQN---DIHSPF 792 (1262)
Q Consensus 720 il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~---~~~~~~ 792 (1262)
+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|+ ..+++.
T Consensus 278 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~ 355 (510)
T PRK09700 278 KVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPN 355 (510)
T ss_pred cccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCC
Confidence 7999999999999999999999999999999999876 358999999976532 1234578999998 457888
Q ss_pred CCHHHHHHHHHHhhc---CC--C-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 000838 793 VTVHESLAFSAWLRL---AP--E-VDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSI 865 (1262)
Q Consensus 793 lTv~e~l~~~~~~~~---~~--~-~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~i 865 (1262)
+||.||+.+....+. .. . ......++.++++++.+++. +..++.+ ..|||||||||+|||+|+.+|+|
T Consensus 356 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~l 430 (510)
T PRK09700 356 FSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEV 430 (510)
T ss_pred CcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCE
Confidence 999999987532110 00 0 11222335578899999996 6667664 47999999999999999999999
Q ss_pred cceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 866 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 866 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||||+|||+.++..+.+.|++++++|.|||++|||+. .+.+..|+++
T Consensus 431 LlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~ 480 (510)
T PRK09700 431 IIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIA 480 (510)
T ss_pred EEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEE
Confidence 9999999999999999999999999877999999999975 5666777753
No 24
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.5e-59 Score=575.11 Aligned_cols=189 Identities=21% Similarity=0.347 Sum_probs=154.9
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEecCCC---CCCCC
Q 000838 720 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH----ETFARISGYCEQND---IHSPF 792 (1262)
Q Consensus 720 il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~~~ 792 (1262)
+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++ .+++.
T Consensus 267 ~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~ 344 (501)
T PRK10762 267 GVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLG 344 (501)
T ss_pred CcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCC
Confidence 6899999999999999999999999999999999876 458999999977532 12345699999996 57788
Q ss_pred CCHHHHHHHHHHhhcC---CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcce
Q 000838 793 VTVHESLAFSAWLRLA---PEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 868 (1262)
Q Consensus 793 lTv~e~l~~~~~~~~~---~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illl 868 (1262)
+|+.||+.+....... .....++.++.++++++.+++. +..++.+ ..||||||||++||+||+.+|++|+|
T Consensus 345 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllL 419 (501)
T PRK10762 345 MSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLIL 419 (501)
T ss_pred CcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 9999999875311100 0012233345688999999995 5666654 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 869 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 869 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||+|||+.++..+.+.|++++++|+|||++|||+. ++.+..|+++
T Consensus 420 DEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~ 466 (501)
T PRK10762 420 DEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRIL 466 (501)
T ss_pred cCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEE
Confidence 9999999999999999999999878999999999975 5666777753
No 25
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=6.1e-59 Score=572.90 Aligned_cols=187 Identities=24% Similarity=0.349 Sum_probs=153.7
Q ss_pred eEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEC-Ccc---CCc------ccccceEEEecCCC
Q 000838 718 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKIS-GYP---KKH------ETFARISGYCEQND 787 (1262)
Q Consensus 718 ~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~-g~~---~~~------~~~~~~~~~v~q~~ 787 (1262)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++ |.+ ... ...++.++|++|++
T Consensus 297 ~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~ 374 (520)
T TIGR03269 297 VKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEY 374 (520)
T ss_pred ceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCc
Confidence 469999999999999999999999999999999999876 458999996 532 111 12345689999999
Q ss_pred CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-----cccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000838 788 IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-----LRQSLVGLPGVNGLSTEQRKRLTIAVELVAN 862 (1262)
Q Consensus 788 ~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-----~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~ 862 (1262)
.+++.+||.||+.+...+. ...+..+++++++++.++|.+ ..++. +..|||||||||+|||||+.+
T Consensus 375 ~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSgGq~qrv~laral~~~ 445 (520)
T TIGR03269 375 DLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSEGERHRVALAQVLIKE 445 (520)
T ss_pred ccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCHHHHHHHHHHHHHhcC
Confidence 8889999999998754321 122333456788999999975 34554 457999999999999999999
Q ss_pred CCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 863 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 863 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|++|||||||+|||+.++..+++.|++++++ |.|||++|||+. .+.+.+|+.+
T Consensus 446 p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~ 499 (520)
T TIGR03269 446 PRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAA 499 (520)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEE
Confidence 9999999999999999999999999999765 899999999975 4666778753
No 26
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3.6e-59 Score=627.82 Aligned_cols=197 Identities=20% Similarity=0.261 Sum_probs=165.2
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.|+|++++|+. +.+.+|+||||+|+|||.+||+|+||||||||+++|+|... .+|+|.+||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 47999999999853 12469999999999999999999999999999999999864 37999999998
Q ss_pred CCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000838 771 KKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 840 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 840 (1262)
+.. ..+|+.++||||++.+++. |++|||.... ..+ ++.++++++.++|.+. .|+.++.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~t----deei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QWS----DEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CCC----HHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 753 4577899999999999974 9999995321 112 3347888888888643 3555554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....+|+++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIl 1422 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFL 1422 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEE
Confidence 345799999999999999999999999999999999999999999999875 4799999999874 666799854
No 27
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=6.7e-59 Score=573.18 Aligned_cols=189 Identities=24% Similarity=0.309 Sum_probs=155.9
Q ss_pred eEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---c---cccceEEEecCCC--CC
Q 000838 718 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH---E---TFARISGYCEQND--IH 789 (1262)
Q Consensus 718 ~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~---~~~~~~~~v~q~~--~~ 789 (1262)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ .+|+|.++|.++.. . .+++.++|++|++ .+
T Consensus 299 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l 375 (529)
T PRK15134 299 NVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSL 375 (529)
T ss_pred ceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhc
Confidence 469999999999999999999999999999999999863 47999999976532 1 1245689999996 47
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcce
Q 000838 790 SPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 868 (1262)
Q Consensus 790 ~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illl 868 (1262)
++.+||.||+.+....+.. ..+..+.+++++++++.+++. +..++. +..|||||||||+|||||+.+|++|+|
T Consensus 376 ~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llll 449 (529)
T PRK15134 376 NPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIIL 449 (529)
T ss_pred CCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 7889999999886533211 122334455688999999997 455665 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 869 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 869 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||+|||+.++..+++.|++++++ |+|||++||++. .+.+..|+.+
T Consensus 450 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~ 497 (529)
T PRK15134 450 DEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVI 497 (529)
T ss_pred eCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEE
Confidence 9999999999999999999999865 899999999975 4556777753
No 28
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=6.7e-59 Score=569.41 Aligned_cols=189 Identities=21% Similarity=0.247 Sum_probs=152.9
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEecCCC---CCCCC
Q 000838 720 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHE----TFARISGYCEQND---IHSPF 792 (1262)
Q Consensus 720 il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 792 (1262)
+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++.
T Consensus 278 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~ 355 (510)
T PRK15439 278 GFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLD 355 (510)
T ss_pred CccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCC
Confidence 5899999999999999999999999999999999876 3579999999865321 1245689999984 47788
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCC
Q 000838 793 VTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 871 (1262)
Q Consensus 793 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEP 871 (1262)
+|+.|++......+..........++.++++++.+|+. +..++.+ ..||||||||++||+||+.+|++||||||
T Consensus 356 ~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEP 430 (510)
T PRK15439 356 APLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEP 430 (510)
T ss_pred CcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCC
Confidence 99999986421111000011222345578999999997 6667664 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 872 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 872 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|+|||+.++..+.+.|++++++|.|||++|||+. ++.+..|+.+
T Consensus 431 t~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~ 474 (510)
T PRK15439 431 TRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVL 474 (510)
T ss_pred CcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEE
Confidence 9999999999999999999878999999999985 5667778753
No 29
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.2e-58 Score=567.94 Aligned_cols=192 Identities=19% Similarity=0.341 Sum_probs=156.4
Q ss_pred eEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEecCCC---CCC
Q 000838 718 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH----ETFARISGYCEQND---IHS 790 (1262)
Q Consensus 718 ~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~ 790 (1262)
+.+|+|+||++++||+++|+|||||||||||++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .++
T Consensus 273 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~ 351 (500)
T TIGR02633 273 RKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIV 351 (500)
T ss_pred ccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcC
Confidence 3589999999999999999999999999999999998752 247999999987532 22356789999995 578
Q ss_pred CCCCHHHHHHHHHH--hhcCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 000838 791 PFVTVHESLAFSAW--LRLAPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIF 867 (1262)
Q Consensus 791 ~~lTv~e~l~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~ill 867 (1262)
+.+||+||+.+... ............++.++++++.+++.+ ..++.+ ..||||||||++|||||+.+|++|+
T Consensus 352 ~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lll 426 (500)
T TIGR02633 352 PILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLI 426 (500)
T ss_pred CCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEE
Confidence 88999999987532 111001122334456889999999964 456654 4799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 868 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 868 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||+|||+.++..+++.|++++++|.|||++|||+. ++.+..|+++
T Consensus 427 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~ 474 (500)
T TIGR02633 427 LDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVL 474 (500)
T ss_pred EcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEE
Confidence 99999999999999999999999888999999999985 5666777753
No 30
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.4e-58 Score=621.69 Aligned_cols=198 Identities=24% Similarity=0.284 Sum_probs=166.0
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.|+|++++|+. +...+|+||||+|+|||.+||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999999852 12359999999999999999999999999999999999877 458999999998
Q ss_pred CCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000838 771 KKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 840 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 840 (1262)
+.. ..+++.++||||++.++.. |++|||... ...+ ++.++++++..++.+. .|+.+|.
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge- 1441 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLE- 1441 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccC-
Confidence 753 4678899999999999874 999999531 1222 2347888888888654 3555654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~-p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..+||||||||++|||||+++ |+||+||||||+||+.+.+.|++.|++.. +++|||+++|++ +....+|+++
T Consensus 1442 ~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl--~ti~~~DrIl 1515 (1560)
T PTZ00243 1442 GGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRL--HTVAQYDKII 1515 (1560)
T ss_pred CcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccH--HHHHhCCEEE
Confidence 3457999999999999999996 89999999999999999999999999864 479999999987 4677899864
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-58 Score=564.90 Aligned_cols=189 Identities=20% Similarity=0.345 Sum_probs=154.9
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEecCCC---CCCCC
Q 000838 720 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH----ETFARISGYCEQND---IHSPF 792 (1262)
Q Consensus 720 il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~~~ 792 (1262)
+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .+++.
T Consensus 268 ~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 345 (501)
T PRK11288 268 LREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPV 345 (501)
T ss_pred cccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCC
Confidence 7999999999999999999999999999999999876 458999999976532 12346789999986 47888
Q ss_pred CCHHHHHHHHHHhhcCC-C--CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcce
Q 000838 793 VTVHESLAFSAWLRLAP-E--VDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 868 (1262)
Q Consensus 793 lTv~e~l~~~~~~~~~~-~--~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illl 868 (1262)
+|+.||+.+........ . ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++|||
T Consensus 346 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllL 420 (501)
T PRK11288 346 HSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILL 420 (501)
T ss_pred CCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEE
Confidence 99999998753211100 0 11223345678999999994 5667664 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 869 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 869 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||+|||+.++..+++.|++++++|.|||++|||+. ++.+..|+.+
T Consensus 421 DEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~ 467 (501)
T PRK11288 421 DEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIV 467 (501)
T ss_pred cCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEE
Confidence 9999999999999999999999888999999999975 4666777753
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-57 Score=554.94 Aligned_cols=190 Identities=16% Similarity=0.274 Sum_probs=150.8
Q ss_pred EEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEecCCC---CCCC
Q 000838 719 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHE----TFARISGYCEQND---IHSP 791 (1262)
Q Consensus 719 ~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~~ 791 (1262)
.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|+. .+++
T Consensus 262 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~ 339 (491)
T PRK10982 262 PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYA 339 (491)
T ss_pred cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCccc
Confidence 48999999999999999999999999999999999876 4589999999775421 1245689999985 3678
Q ss_pred CCCHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 000838 792 FVTVHESLAFSAW--LRLAPE-VDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIF 867 (1262)
Q Consensus 792 ~lTv~e~l~~~~~--~~~~~~-~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~ill 867 (1262)
.+|+.+|..+... ...... ......++.++++++.+++. +..++. +.+||||||||++||++++.+|+||+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~ill 414 (491)
T PRK10982 340 YLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILM 414 (491)
T ss_pred CCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 8888877433210 000001 12223345678899999985 445655 35799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 868 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 868 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||+|||+.++..+++.|+++.++|+|||++|||+. ++.+..|+++
T Consensus 415 LDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~ 462 (491)
T PRK10982 415 LDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRIL 462 (491)
T ss_pred EcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEE
Confidence 99999999999999999999999888999999999985 4666778753
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3e-56 Score=545.47 Aligned_cols=203 Identities=18% Similarity=0.304 Sum_probs=155.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..++ ..+|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 467788887763 24699999999999999999999999999999999996531 1479999999764
Q ss_pred Cc----ccccceEEEecCCCCCCC--CCCHHHHHHHHHHh--hcCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000838 772 KH----ETFARISGYCEQNDIHSP--FVTVHESLAFSAWL--RLAPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGV 842 (1262)
Q Consensus 772 ~~----~~~~~~~~~v~q~~~~~~--~lTv~e~l~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~ 842 (1262)
.. ...++.++|++|++.+.+ ..|+.+++.+...- ....... ...++.++++++.+++.+ ..++.+
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~----- 399 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF----- 399 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----
Confidence 21 123467999999876543 25777766543210 0011112 223456889999999987 666654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHHH-hhhh
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFES-FDEA 915 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~-fd~~ 915 (1262)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++| .|||++||++. ++.+. .|++
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v 473 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRL 473 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeE
Confidence 4799999999999999999999999999999999999999999999998775 47999999975 33333 4543
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.8e-54 Score=469.03 Aligned_cols=191 Identities=27% Similarity=0.342 Sum_probs=162.8
Q ss_pred ceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEecCCCC--
Q 000838 717 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH------ETFARISGYCEQNDI-- 788 (1262)
Q Consensus 717 ~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~~-- 788 (1262)
...++++||+++++||.+||+|.||||||||=.+|.+...+ +|+|.++|.++.. ...++.+-.|+|||.
T Consensus 299 ~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygS 375 (534)
T COG4172 299 HLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGS 375 (534)
T ss_pred heEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCC
Confidence 35689999999999999999999999999999999998763 5999999998753 235677889999984
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcce
Q 000838 789 HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 868 (1262)
Q Consensus 789 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illl 868 (1262)
+.|.+||.|-+.-+...+.+ ..+..++++++.++|+.+||++..-.. .+.++|||||||++||||++.+|++++|
T Consensus 376 LsPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~R----YPhEFSGGQRQRIAIARAliLkP~~i~L 450 (534)
T COG4172 376 LSPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNR----YPHEFSGGQRQRIAIARALILKPELILL 450 (534)
T ss_pred CCcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhc----CCcccCcchhhHHHHHHHHhcCCcEEEe
Confidence 78999999999888766543 457788999999999999998643221 3678999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 869 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 869 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||.||..-+.+|+++|+++.++ |.+-++++||.. -+-.+.|+++
T Consensus 451 DEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~vi 498 (534)
T COG4172 451 DEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVI 498 (534)
T ss_pred cCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEE
Confidence 9999999999999999999999754 999999999975 3455666643
No 35
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-53 Score=526.87 Aligned_cols=185 Identities=19% Similarity=0.251 Sum_probs=151.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 578899988763 2459999999999999999999999999999999999876 45899999873
Q ss_pred CcccccceEEEecCCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000838 772 KHETFARISGYCEQNDI--HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgG 848 (1262)
+.+||++|++. +.+.+|+.|++.+.. . .. ..++.++++++.+++. +..+..+ ..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~-~~----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---Q-EG----DDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---c-CC----ccHHHHHHHHHHcCCChhHhcCcc-----cccCHH
Confidence 46899999864 456799999986421 1 11 1124478899999994 5566654 479999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++ +.|||++|||+. .+....|+++
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~ 506 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRII 506 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999876 459999999975 4555667643
No 36
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.1e-53 Score=525.69 Aligned_cols=188 Identities=22% Similarity=0.292 Sum_probs=152.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.+++.
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET-- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 578889988763 3469999999999999999999999999999999999876 45899998542
Q ss_pred CcccccceEEEecCCC-CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000838 772 KHETFARISGYCEQND-IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~-~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGq 849 (1262)
..+||++|+. .+++.+||.|++.+....... ... +...+++++.+++.+ ..++.+ ..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhcccccc---ccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999996 677889999999876422211 111 122457899999964 445553 4799999
Q ss_pred HHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 850 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 850 rqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. | |||++|||+. .+....|+++
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~ 513 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHIL 513 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999862 4 8999999975 4556677753
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1e-52 Score=519.79 Aligned_cols=188 Identities=20% Similarity=0.276 Sum_probs=151.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--
Confidence 477889887763 2469999999999999999999999999999999999876 45899998542
Q ss_pred CcccccceEEEecCCC-CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000838 772 KHETFARISGYCEQND-IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~-~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGq 849 (1262)
..+||++|+. .+++.+||.|++.+...... .... +..++++++.+++.+ ..++.+ ..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1589999986 47788999999987642211 1111 123557899999964 445553 4799999
Q ss_pred HHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 850 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 850 rqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. .|||++|||+. .+....|+++
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~ 511 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHIL 511 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999872 48999999974 4555667753
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.1e-53 Score=518.53 Aligned_cols=185 Identities=23% Similarity=0.246 Sum_probs=154.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. + ..|+++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 466778876652 1 24899999999999999999999999999999999876 458999886
Q ss_pred CcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000838 772 KHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRK 851 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 851 (1262)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.+++.+..++.+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1489999998888889999999875211 111 124678999999988777764 479999999
Q ss_pred HHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 852 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 852 rl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++|||+. .+....|+++
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvi 525 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLM 525 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999764 899999999975 3555677743
No 39
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-50 Score=506.24 Aligned_cols=184 Identities=22% Similarity=0.324 Sum_probs=147.8
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 577889988763 3569999999999999999999999999999999999876 45899998741
Q ss_pred CcccccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 000838 772 KHETFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgG 848 (1262)
..+||++|+. .+.+..|+.+++.- . .. ...+..+.++++.+++.. ..++.+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 1 11 112345788999999963 556654 479999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ . .|||++|||+. .+...+|+++
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~ 498 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLY 498 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999987 3 49999999974 4555677643
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.7e-50 Score=503.28 Aligned_cols=187 Identities=24% Similarity=0.317 Sum_probs=150.5
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|||||||||||++|+|... +.+|+|.+ |.+
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~- 381 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTK- 381 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCC-
Confidence 477889988763 3569999999999999999999999999999999999876 45899998 432
Q ss_pred CcccccceEEEecCCC-CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 000838 772 KHETFARISGYCEQND-IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~-~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGq 849 (1262)
-.+||++|+. .+++.+||.|++.+..... ... .....+.++++.+++. +..++.+ ..|||||
T Consensus 382 ------~~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 382 ------LEVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred ------cEEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 1489999975 5788899999998753210 011 1123477889999985 3456554 4799999
Q ss_pred HHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 850 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 850 rqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||.. .+....|+.
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i 507 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTEC 507 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEE
Confidence 99999999999999999999999999999999999999875 459999999964 344566664
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-49 Score=455.62 Aligned_cols=189 Identities=20% Similarity=0.376 Sum_probs=157.7
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEecCC---CCCCCC
Q 000838 720 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH----ETFARISGYCEQN---DIHSPF 792 (1262)
Q Consensus 720 il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~---~~~~~~ 792 (1262)
.++|+||++++||++||-|-=|||+|-|+++|.|..+ ..+|+|.+||++... +..+.-++|||.| +-+++.
T Consensus 274 ~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~ 351 (500)
T COG1129 274 KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLD 351 (500)
T ss_pred ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCC
Confidence 4789999999999999999999999999999999654 348999999997643 2345678999987 457888
Q ss_pred CCHHHHHHHHHHhhcCC--CCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccee
Q 000838 793 VTVHESLAFSAWLRLAP--EVDSETRKMFIEEIMELVELNPL-RQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 869 (1262)
Q Consensus 793 lTv~e~l~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlD 869 (1262)
+++.+|+.++...+... -.+....++.+++..+.+++... .+.. +..||||.+|||.|||.|..+|++|+||
T Consensus 352 ~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilD 426 (500)
T COG1129 352 MSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILD 426 (500)
T ss_pred CcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEEC
Confidence 99999998873222111 24455556678889999988643 2233 4579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 870 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 870 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||.|+|..++.+|.++|++++++|++||++|-+. +|+....|+++
T Consensus 427 EPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSEl-pEll~~~DRIl 472 (500)
T COG1129 427 EPTRGIDVGAKAEIYRLIRELAAEGKAILMISSEL-PELLGLSDRIL 472 (500)
T ss_pred CCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCCh-HHHHhhCCEEE
Confidence 99999999999999999999999999999999987 48999999964
No 42
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=9.8e-49 Score=466.37 Aligned_cols=200 Identities=25% Similarity=0.284 Sum_probs=152.9
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcch
Q 000838 2 TLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRY 81 (1262)
Q Consensus 2 ~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~ 81 (1262)
++|||+|||||||||++|+|...|+ +|+|...+ .-.++|++|++...+..||.+.+.-+..- .+
T Consensus 32 iGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv~~~v~~~~~~-----~~ 95 (530)
T COG0488 32 IGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTVLDYVIEGFGE-----LR 95 (530)
T ss_pred EEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccHHHHHHhhhHH-----HH
Confidence 6899999999999999999999998 99998865 22699999999898889999999875431 11
Q ss_pred hhhHHHHHHHHhcCCCCCCch---hHHH-HHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 82 DMLMELARREKAAGIKPDPDI---DVYM-KAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
+...+..... ...++.+. ..+. ......+.+.+.++..++..+|+.+. ++.+ .+||||||.||+||+
T Consensus 96 ~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~-----~~LSGG~r~Rv~LA~ 166 (530)
T COG0488 96 ELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPV-----SSLSGGWRRRVALAR 166 (530)
T ss_pred HHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCch-----hhcCHHHHHHHHHHH
Confidence 1111111111 00111111 1111 12223456677889999999999876 5444 569999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEE-EecCcc
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIV-YQGPRE 231 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~-~~G~~~ 231 (1262)
||+.+|++|+|||||++||..+..++.+.|++. . + ++++++||+..+.+.|++|+-++.|++. |.|..+
T Consensus 167 aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~---~-g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny~ 236 (530)
T COG0488 167 ALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY---P-G-TVIVVSHDRYFLDNVATHILELDRGKLTPYKGNYS 236 (530)
T ss_pred HHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC---C-C-cEEEEeCCHHHHHHHhhheEEecCCceeEecCCHH
Confidence 999999999999999999999999999999852 3 3 6777999999999999999999999875 555444
No 43
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=6.7e-48 Score=480.96 Aligned_cols=186 Identities=18% Similarity=0.234 Sum_probs=144.4
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++ +.+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 578899988773 12358999999999999999999999999999999999876 45799998752
Q ss_pred CcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000838 772 KHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqr 850 (1262)
..+||++|+. .+.+++.++..+...... .... ++.++++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~-~~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCF-PGVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhc-CCCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 3589999975 244566666432211111 1111 234778999999974 44554 357999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||++||++|+.+|++|+|||||+|||+.+...+.+.|++. . .|||++|||+. .+....|+.
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv 694 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDEL 694 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999998888764 3 49999999975 355566764
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=8.8e-45 Score=408.60 Aligned_cols=205 Identities=20% Similarity=0.312 Sum_probs=165.5
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|++..-+. +...+++|||++++||++||.|-.|-|-+-|+.+|+|..++ .+|+|.++|.+.
T Consensus 257 vL~V~~L~v~~~~------------~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v 322 (501)
T COG3845 257 VLEVEDLSVKDRR------------GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDV 322 (501)
T ss_pred EEEEeeeEeecCC------------CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEec
Confidence 5667777754321 23579999999999999999999999999999999998653 359999999985
Q ss_pred -C---c-ccccceEEEecCCC---CCCCCCCHHHHHHHHHHhhc----CCCCCHHHHHHHHHHHHHHcCCcccccccccC
Q 000838 772 -K---H-ETFARISGYCEQND---IHSPFVTVHESLAFSAWLRL----APEVDSETRKMFIEEIMELVELNPLRQSLVGL 839 (1262)
Q Consensus 772 -~---~-~~~~~~~~~v~q~~---~~~~~lTv~e~l~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~ 839 (1262)
. . ..++.-++|||+|- -+.+.+|+.||+.+...-+. ..-.+....++...++++.++.......
T Consensus 323 ~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~---- 398 (501)
T COG3845 323 LGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD---- 398 (501)
T ss_pred cccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCC----
Confidence 2 2 23345689999986 35678999999987643211 1123456667778899999988632211
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
...+.||||++||+-+||+|.++|++|+..+||.|||..+.+.|.+.|.+.+++|+.|++++-+.. |++++.|+.
T Consensus 399 ~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrI 473 (501)
T COG3845 399 APARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRI 473 (501)
T ss_pred cchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhhee
Confidence 124679999999999999999999999999999999999999999999999999999999999986 799999984
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-44 Score=362.14 Aligned_cols=205 Identities=24% Similarity=0.389 Sum_probs=176.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC----cccceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF----VPQRTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+|||||||||||+||+|+.+++ +|+|.++|.++... ..|+.+|+|+|+.++||.+||-||+..+..--.
T Consensus 30 vv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~ 106 (240)
T COG1126 30 VVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKVK 106 (240)
T ss_pred EEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccccchHHHHHHhhhHHHc
Confidence 47899999999999999999999998 99999999776422 236789999999999999999999998653210
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
..+.+++++++.++|+.+||.+.+| .++.+|||||||||+||
T Consensus 107 ---------------------------------~~~k~eA~~~A~~lL~~VGL~~ka~-----~yP~qLSGGQqQRVAIA 148 (240)
T COG1126 107 ---------------------------------KLSKAEAREKALELLEKVGLADKAD-----AYPAQLSGGQQQRVAIA 148 (240)
T ss_pred ---------------------------------CCCHHHHHHHHHHHHHHcCchhhhh-----hCccccCcHHHHHHHHH
Confidence 1233456677889999999999988 67889999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEF 236 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~ 236 (1262)
|||+.+|+++++|||||+|||+...++.+.++++++. +.|.+++||.+..+.+.+|||+.|++|+++++|++++.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~--- 223 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEF--- 223 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHH---
Confidence 9999999999999999999999999999999998753 46667789999999999999999999999999998876
Q ss_pred HHhCCCCCCCCCChhhHHhh
Q 000838 237 FESMGFKCPQRKGVADFLQE 256 (1262)
Q Consensus 237 ~~~~g~~~p~~~~~~~~~~~ 256 (1262)
|..|++....+|+..
T Consensus 224 -----f~~p~~~R~~~FL~~ 238 (240)
T COG1126 224 -----FDNPKSERTRQFLSK 238 (240)
T ss_pred -----hcCCCCHHHHHHHHh
Confidence 345666666666654
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-42 Score=349.50 Aligned_cols=200 Identities=25% Similarity=0.345 Sum_probs=174.1
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|++.++ ++.++|+|||++|++||+++|+|||||||||||+||.++.. +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 5678887776 45789999999999999999999999999999999999876 45899999996542
Q ss_pred ----cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 773 ----HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 773 ----~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
....|+.+|+|+|+.++||++||.||+.++...- ...++++.++.+.++|+.+||.+.+|.+ +.+||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcH
Confidence 2356789999999999999999999999875432 2456677788899999999999999887 4589999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||+|||||+.+|+++++|||||.|||+...++.+.+++++++|.|.|++||+... .-+..|++
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~Vadrv 206 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRV 206 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheE
Confidence 9999999999999999999999999999999999999999999999999999998652 23344554
No 47
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-42 Score=362.74 Aligned_cols=207 Identities=24% Similarity=0.341 Sum_probs=180.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+.+|+|+||||||||+++|.++..|+ +|+|.++|.++.... .|+.||+++|+..++.+.||+||+.|+.++
T Consensus 34 I~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLei 110 (339)
T COG1135 34 IFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLEL 110 (339)
T ss_pred EEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhh
Confidence 47899999999999999999999999 999999998886543 257899999999999999999999999887
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.+. ++++++++|.++|+.+||++.+| .++.+|||||||||+
T Consensus 111 ag~----------------------------------~k~ei~~RV~elLelVgL~dk~~-----~yP~qLSGGQKQRVa 151 (339)
T COG1135 111 AGV----------------------------------PKAEIKQRVAELLELVGLSDKAD-----RYPAQLSGGQKQRVA 151 (339)
T ss_pred cCC----------------------------------CHHHHHHHHHHHHHHcCChhhhc-----cCchhcCcchhhHHH
Confidence 642 22345678999999999999887 788899999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|+||++|||||+|||.+...|+++|++..++ -+.||+++||.++.+.+.|||+.||++|++++.|+..++.
T Consensus 152 IARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~-lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 152 IARALANNPKILLCDEATSALDPETTQSILELLKDINRE-LGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHH-cCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999998664 4677788999999999999999999999999999998873
Q ss_pred HHHHhCCCCCCCCCChhhHHhhhc
Q 000838 235 EFFESMGFKCPQRKGVADFLQEVT 258 (1262)
Q Consensus 235 ~~~~~~g~~~p~~~~~~~~~~~~~ 258 (1262)
..|++.-..+|+.+..
T Consensus 231 --------~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 231 --------ANPKHAITQEFIGETL 246 (339)
T ss_pred --------cCcchHHHHHHHHhhc
Confidence 3466555555655443
No 48
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=348.86 Aligned_cols=199 Identities=26% Similarity=0.367 Sum_probs=173.8
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++++++.+. ...+|+|+|++|++||+++|+||||||||||||+|+|... +.+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 456778877763 3579999999999999999999999999999999999887 4589999999887
Q ss_pred CcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000838 772 KHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRK 851 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 851 (1262)
. ...+.+|||+|++.++|.+||.||+.++...+. .++++++++++++++.+||.+..|.+ +.+|||||||
T Consensus 68 ~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 T--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred C--CCCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 3 234678999999999999999999999887653 34456667899999999999999887 5689999999
Q ss_pred HHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 852 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 852 rl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||+|||||+.+|+||+||||+++||+.|+..+++.|.++.++ ++||+++|||... ...+-|+++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~E-Av~LsdRiv 202 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDE-AVYLADRVV 202 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHH-HHhhhCEEE
Confidence 999999999999999999999999999999999999998754 8999999999864 445778753
No 49
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.6e-40 Score=347.78 Aligned_cols=202 Identities=28% Similarity=0.410 Sum_probs=169.8
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|++..+.... ....+|+++|++|++||+++|+|||||||||||++|.|...+ .+|.|.++|.+...
T Consensus 3 ~~~~v~k~y~~~~---------~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~ 71 (226)
T COG1136 3 ELKNVSKIYGLGG---------EKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTK 71 (226)
T ss_pred EEeeeEEEeccCC---------cceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCc
Confidence 3566765554221 225799999999999999999999999999999999998874 68999999976532
Q ss_pred -------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCCC
Q 000838 774 -------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQ-SLVGLPGVNGL 845 (1262)
Q Consensus 774 -------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~-~~~~~~~~~~l 845 (1262)
.-+++.+|||+|+..+.|.+||.||+.+...+.... ....++.++++++.+||.+..+ +. +.+|
T Consensus 72 l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eL 143 (226)
T COG1136 72 LSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSEL 143 (226)
T ss_pred CCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chhc
Confidence 124567999999999999999999999877654322 2245666889999999997666 44 4589
Q ss_pred CHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 846 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 846 SgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||||+|||||+.+|++++.||||.+||+.+...|++.++++.++ |+|||++|||| ++.+.+|+.+
T Consensus 144 SGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i 213 (226)
T COG1136 144 SGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVI 213 (226)
T ss_pred CHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEE
Confidence 999999999999999999999999999999999999999999999866 99999999997 4778888864
No 50
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-40 Score=341.32 Aligned_cols=192 Identities=25% Similarity=0.382 Sum_probs=170.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++++|||||||||+|++|.+++.|+ +|+|.+||+++.+.+ .||.+|||-|+-.+||++||.|||.+-..+.+-
T Consensus 29 f~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~~w 105 (309)
T COG1125 29 FLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLLGW 105 (309)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhcCC
Confidence 47899999999999999999999999 999999999987654 468999999999999999999999997766542
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcc--cccccccCCcccccccccchhhHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDN--CADILVGDEMIRGISGGQKKRVTT 155 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~--~~~t~vg~~~~~~LSGGqkqRvsi 155 (1262)
..++++++++++++.+||+. .++ ++++.|||||+|||.+
T Consensus 106 ----------------------------------~k~~i~~r~~ELl~lvgL~p~~~~~-----RyP~eLSGGQQQRVGv 146 (309)
T COG1125 106 ----------------------------------DKERIKKRADELLDLVGLDPSEYAD-----RYPHELSGGQQQRVGV 146 (309)
T ss_pred ----------------------------------CHHHHHHHHHHHHHHhCCCHHHHhh-----cCchhcCcchhhHHHH
Confidence 11234567899999999974 444 8999999999999999
Q ss_pred HHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 156 GEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 156 A~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
||||+.+|+|++||||+++|||.++.++.+.++++.++- ++||+.+|||.+|+.+++|||++|++|+++..+++++++.
T Consensus 147 ~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 147 ARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 999999999999999999999999999999998875544 4567779999999999999999999999999999999864
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-40 Score=348.11 Aligned_cols=203 Identities=27% Similarity=0.413 Sum_probs=172.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+.. ..+|+|||+++++|++++|+||||||||||+|+|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~~-------------~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYGN-------------RPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEECC-------------EeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 5789999998852 259999999999999999999999999999999999877 4689999999886
Q ss_pred CcccccceEEEecCCCCC--CCCCCHHHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 772 KHETFARISGYCEQNDIH--SPFVTVHESLAFSAWLRL--APEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~~~--~~~lTv~e~l~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
....-+..+|||||...+ -..+||+|.+..+..-+. ....++ +.++.++++|+.+|+.+.+|+.+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~-~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNK-KDKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccH-HHHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 554445789999996422 223899999987643222 112222 336679999999999999999876 6999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||+|||.|||||+++|++|+|||||+|+|+.++..+.++|++++++|+||++++||++ .+.+.||+++
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi 210 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVI 210 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEE
Confidence 9999999999999999999999999999999999999999999988999999999997 5888999964
No 52
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=339.85 Aligned_cols=199 Identities=27% Similarity=0.376 Sum_probs=177.7
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
++|+|++..+. ++.+++|+|++|++||++.++|||||||||+||+|.+... +.+|+|++||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 46788876653 4679999999999999999999999999999999999887 46899999999875
Q ss_pred c---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCH
Q 000838 773 H---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP--LRQSLVGLPGVNGLST 847 (1262)
Q Consensus 773 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~--~~~~~~~~~~~~~lSg 847 (1262)
. ...||.+|||-|.-.+||++||.||+.+...+. ..++++.+++++|+++.+||.+ +.+++ +.+|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 457899999999999999999999999876654 4677888899999999999985 56665 578999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||+|||.+||||+.+|+||+||||+++|||.++..+++.++++.++ |+|||++|||.. |.+.+-|+.
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri 206 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRI 206 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceE
Confidence 9999999999999999999999999999999999999999999876 999999999976 677888984
No 53
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.8e-40 Score=325.16 Aligned_cols=198 Identities=26% Similarity=0.331 Sum_probs=173.3
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.|+|++..|.. .+.+|+||||++++||++-|+||||||||||||+|.+... ++.|+|.++|.++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 467788766642 3569999999999999999999999999999999999766 46899999999864
Q ss_pred c------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 773 H------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
. .-.+|.+|.|+||..+.+..||.||+.|+..... .+..+.++++.++|+.+||.+.++.. +.+||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 3 2357899999999999999999999999887653 34567778899999999999988776 56899
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 914 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 914 (1262)
|||+||++||||++.+|++|+.||||.+|||..+.+|++++.++.+.|.||+++|||. ++.+...+
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~ 205 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRH 205 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccC
Confidence 9999999999999999999999999999999999999999999998999999999984 45555544
No 54
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-40 Score=367.38 Aligned_cols=204 Identities=27% Similarity=0.405 Sum_probs=180.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-cceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++++|||||||||||++|+|+.+|+ +|+|.++|+++++..+ +|.+++|+|+..++|.+||+||+.|+.++++.
T Consensus 31 f~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~-- 105 (338)
T COG3839 31 FVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRGV-- 105 (338)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCCC--
Confidence 36899999999999999999999998 9999999999998765 48999999999999999999999999987653
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..++++++|+++.+.|+|++..| +++++|||||||||+|||||
T Consensus 106 --------------------------------~k~ei~~rV~eva~~L~l~~lL~-----r~P~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 106 --------------------------------PKAEIDKRVKEVAKLLGLEHLLN-----RKPLQLSGGQRQRVALARAL 148 (338)
T ss_pred --------------------------------chHHHHHHHHHHHHHcCChhHHh-----cCcccCChhhHHHHHHHHHH
Confidence 12345677899999999999887 67789999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHHHHh
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFES 239 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~~~~ 239 (1262)
+.+|++++||||+|.||+..+..+...|+++.+ +-+++++.+|||..|+..++|||+||++|++...|++.++.
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~-~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely----- 222 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHE-RLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELY----- 222 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHH-hcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHh-----
Confidence 999999999999999999999999999998644 45577778999999999999999999999999999999984
Q ss_pred CCCCCCCCCChhhHHh
Q 000838 240 MGFKCPQRKGVADFLQ 255 (1262)
Q Consensus 240 ~g~~~p~~~~~~~~~~ 255 (1262)
..|.+.-.++|+.
T Consensus 223 ---~~P~n~fVA~FiG 235 (338)
T COG3839 223 ---ERPANLFVAGFIG 235 (338)
T ss_pred ---hCccchhhhhhcC
Confidence 3455555555543
No 55
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-39 Score=347.14 Aligned_cols=203 Identities=26% Similarity=0.312 Sum_probs=175.0
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.+++++..+... ..+...+|+|||++|++||++||+|+||||||||++++.++.. |.+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 4677777655421 1134579999999999999999999999999999999999877 46899999997653
Q ss_pred c------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 773 H------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
. +..|+.+|+++|+..++...||.||+.|...+.. .+++++++++.++++.+||.+.++.+ +.+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 2 3467899999999999999999999999987764 56788899999999999999988886 45899
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 914 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 914 (1262)
|||||||+|||||+.+|+|||.|||||.|||.+.+.|.+.|+++.++ |.||+++||++. -+-..+|+
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~r 211 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDR 211 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhh
Confidence 99999999999999999999999999999999999999999999765 999999999864 23445555
No 56
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-40 Score=343.95 Aligned_cols=177 Identities=25% Similarity=0.368 Sum_probs=156.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
+++|+||||||||||||+|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|.+||+||+.++.+.++..
T Consensus 31 fvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~-- 103 (248)
T COG1116 31 FVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRGKS-- 103 (248)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHHhhheehhhccccc--
Confidence 47999999999999999999999998 999999999883 34567999999999999999999999998765421
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
..+.+.+++++|+.+||.+..| +++++|||||||||+|||||+
T Consensus 104 --------------------------------~~e~~~~a~~~L~~VgL~~~~~-----~~P~qLSGGMrQRVaiARAL~ 146 (248)
T COG1116 104 --------------------------------KAEARERAKELLELVGLAGFED-----KYPHQLSGGMRQRVAIARALA 146 (248)
T ss_pred --------------------------------hHhHHHHHHHHHHHcCCcchhh-----cCccccChHHHHHHHHHHHHh
Confidence 1223446788999999999887 788999999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCC
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDG 222 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G 222 (1262)
.+|+||+||||+++||+.|+.++.+.|.++.++ .+.+|+++||+.+|+..++|||++|.++
T Consensus 147 ~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~-~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 147 TRPKLLLLDEPFGALDALTREELQDELLRLWEE-TRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred cCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHh-hCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999999999998887654 4567778999999999999999999984
No 57
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-40 Score=347.82 Aligned_cols=193 Identities=25% Similarity=0.418 Sum_probs=169.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCc---cCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGH---NMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~---~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
++|++|||||||||||++|+|+..|+ .|.|.+||+ |.+... ..|+||||+|+..+|+.+||.+||.||.+.+.
T Consensus 30 ~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~ 106 (345)
T COG1118 30 LVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPHMTVADNIAFGLKVRK 106 (345)
T ss_pred EEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcccchHHhhhhhcccccc
Confidence 47999999999999999999999999 999999999 555432 34789999999999999999999999987652
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. .+..+++.++.++|+.++|++.++ +++.+|||||||||++|
T Consensus 107 ~~--------------------------------p~~~~~r~rv~elL~lvqL~~la~-----ryP~QLSGGQrQRVALA 149 (345)
T COG1118 107 ER--------------------------------PSEAEIRARVEELLRLVQLEGLAD-----RYPAQLSGGQRQRVALA 149 (345)
T ss_pred cC--------------------------------CChhhHHHHHHHHHHHhcccchhh-----cCchhcChHHHHHHHHH
Confidence 10 012234667889999999999776 88999999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||+..|++|+||||+++||+..+.++.+.|++... +-+.+.+.+|||.+|+.++||||++|++|+|...||++++.
T Consensus 150 RALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~-~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 150 RALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHD-RLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHH-hhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 999999999999999999999999999999998754 33556667999999999999999999999999999999884
No 58
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.4e-39 Score=362.93 Aligned_cols=201 Identities=32% Similarity=0.447 Sum_probs=175.8
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|++..+. .++.+|+||||++++||++||+||||||||||+|+|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~ 69 (293)
T COG1131 4 VIEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDV 69 (293)
T ss_pred eeeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeC
Confidence 345677776663 13679999999999999999999999999999999999887 4689999999876
Q ss_pred Cc--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000838 772 KH--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 772 ~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGq 849 (1262)
.. ...++.+||++|++.+++.+||+|++.|.+.++.... ...+++++++++.+||.+..++. +++||+||
T Consensus 70 ~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~ 141 (293)
T COG1131 70 VKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGM 141 (293)
T ss_pred ccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHH
Confidence 53 4567889999999999999999999999999886543 34556799999999999855554 45799999
Q ss_pred HHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHHHhhhh
Q 000838 850 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 850 rqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||++||+||+++|+++||||||+||||.++..+++.|++++++| +||+++||+++ ++...+|++
T Consensus 142 kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v 207 (293)
T COG1131 142 KQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRV 207 (293)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEE
Confidence 999999999999999999999999999999999999999999887 89999999986 677789974
No 59
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=327.64 Aligned_cols=206 Identities=25% Similarity=0.423 Sum_probs=169.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC--CCCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD--SSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+||+||||||||||||+++.++.. |..+++|+|.++|+++.+. ..|+++|+|+|.|+-|| +|++||+.|+.+
T Consensus 35 VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r 113 (253)
T COG1117 35 VTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLR 113 (253)
T ss_pred eEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHH
Confidence 589999999999999999998865 3457899999999998543 24688999999999998 899999999998
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCC-cccccccccCCcccccccccchh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGL-DNCADILVGDEMIRGISGGQKKR 152 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL-~~~~~t~vg~~~~~~LSGGqkqR 152 (1262)
+++... .+.+++|+..|+.-.| ++..|.+ ++...+|||||+||
T Consensus 114 ~~g~~~----------------------------------~~ldeiVe~sLk~AaLWdEVKDrL--~~sa~~LSGGQQQR 157 (253)
T COG1117 114 LHGIKD----------------------------------KELDEIVESSLKKAALWDEVKDRL--HKSALGLSGGQQQR 157 (253)
T ss_pred hhccch----------------------------------HHHHHHHHHHHHHhHhHHHhHHHh--hCCccCCChhHHHH
Confidence 876421 1123345555666666 3344433 13455799999999
Q ss_pred hHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcch
Q 000838 153 VTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPREL 232 (1262)
Q Consensus 153 vsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~ 232 (1262)
++|||||+.+|+|||||||||+|||.+...|.+++.++. .+-+|+++||++.++.+..|++..+..|++++.|++++
T Consensus 158 LcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk---~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 158 LCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK---KKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH---hccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 999999999999999999999999999999999999863 35677779999999999999999999999999999998
Q ss_pred HHHHHHhCCCCCCCCCChhhHH
Q 000838 233 VLEFFESMGFKCPQRKGVADFL 254 (1262)
Q Consensus 233 ~~~~~~~~g~~~p~~~~~~~~~ 254 (1262)
+ |..|+++...||+
T Consensus 235 i--------F~~P~~~~TedYi 248 (253)
T COG1117 235 I--------FTNPKHKRTEDYI 248 (253)
T ss_pred h--------hcCccHHHHHHHh
Confidence 7 3457666666654
No 60
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.9e-40 Score=366.11 Aligned_cols=207 Identities=28% Similarity=0.409 Sum_probs=182.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-cceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++++|||||||||||++|+|+..|+ +|+|.++|++++...+ +|.+|+|+|+..+||.|||+||+.|+.+.++..
T Consensus 33 f~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~~~- 108 (352)
T COG3842 33 FVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRKKL- 108 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhcCCC-
Confidence 46899999999999999999999999 9999999999987765 588999999999999999999999998744310
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..++++++++++++.++|++.++ +++.+|||||||||+|||||
T Consensus 109 --------------------------------~~~~i~~rv~e~L~lV~L~~~~~-----R~p~qLSGGQqQRVALARAL 151 (352)
T COG3842 109 --------------------------------KKAEIKARVEEALELVGLEGFAD-----RKPHQLSGGQQQRVALARAL 151 (352)
T ss_pred --------------------------------CHHHHHHHHHHHHHHcCchhhhh-----hChhhhChHHHHHHHHHHHh
Confidence 11235668999999999999776 77889999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHHHHh
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFES 239 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~~~~ 239 (1262)
+.+|++||||||.|+||..-+.++...|+++.+.. +++.+.+|||-+|+..++|||+||++|+|...|+++++
T Consensus 152 ~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~ei------ 224 (352)
T COG3842 152 VPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEI------ 224 (352)
T ss_pred hcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHH------
Confidence 99999999999999999999999999999887654 56677799999999999999999999999999999998
Q ss_pred CCCCCCCCCChhhHHhhh
Q 000838 240 MGFKCPQRKGVADFLQEV 257 (1262)
Q Consensus 240 ~g~~~p~~~~~~~~~~~~ 257 (1262)
|..|...-.++|+.+.
T Consensus 225 --Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 225 --YERPATRFVADFIGES 240 (352)
T ss_pred --hhCcchHHHHHHhCcc
Confidence 3456666677776643
No 61
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=359.49 Aligned_cols=178 Identities=20% Similarity=0.223 Sum_probs=133.0
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.+.|+++.++. +-.++++++|-+.+++.++++||||+|||||||++.|... +..|.|.-.-+.
T Consensus 388 pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H~ 453 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSHN 453 (614)
T ss_pred CeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--cccccccccccc
Confidence 46778888877652 1258999999999999999999999999999999999877 446776533221
Q ss_pred CCcccccceEEEecCC--CCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 771 KKHETFARISGYCEQN--DIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 771 ~~~~~~~~~~~~v~q~--~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
.+++..|+ +.+.-..++-|++.=.. .++.+.+.+..++..+||....+.. ..++||+|
T Consensus 454 --------~~~~y~Qh~~e~ldl~~s~le~~~~~~--------~~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~G 513 (614)
T KOG0927|consen 454 --------KLPRYNQHLAEQLDLDKSSLEFMMPKF--------PDEKELEEMRSILGRFGLTGDAQVV----PMSQLSDG 513 (614)
T ss_pred --------cchhhhhhhHhhcCcchhHHHHHHHhc--------cccchHHHHHHHHHHhCCCcccccc----chhhcccc
Confidence 12233333 22223356666654211 1123445588899999998554433 24689999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 905 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 905 (1262)
||+||..|+.++..|.+|+|||||+|||..+...+.+.|.+. ..+||.++||-.
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr 567 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR 567 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh
Confidence 999999999999999999999999999999999988888765 458999999854
No 62
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.3e-39 Score=330.97 Aligned_cols=193 Identities=24% Similarity=0.351 Sum_probs=166.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+|||||||||||++|.|+++|+ +|+|.++|.++.... .++++|+++|+-.+|.++||+||+.|..+-
T Consensus 36 i~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre 112 (263)
T COG1127 36 ILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLRE 112 (263)
T ss_pred EEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccccccccchhHhhheehHh
Confidence 47999999999999999999999999 999999999986543 246799999999999999999999997653
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCccc-ccccccCCcccccccccchhh
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNC-ADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~-~~t~vg~~~~~~LSGGqkqRv 153 (1262)
+.. .+....++.+..-|+.+||... +| .++..||||||||+
T Consensus 113 ~~~---------------------------------lp~~~i~~lv~~KL~~VGL~~~~~~-----~~PsELSGGM~KRv 154 (263)
T COG1127 113 HTK---------------------------------LPESLIRELVLMKLELVGLRGAAAD-----LYPSELSGGMRKRV 154 (263)
T ss_pred hcc---------------------------------CCHHHHHHHHHHHHHhcCCChhhhh-----hCchhhcchHHHHH
Confidence 210 1122344556677899999875 44 78889999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+||||++.||+++++|||||||||.++..+.++++++.+. -+.|++++|||.+++...|||+++|.+|+|+..|+++++
T Consensus 155 aLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~-lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 155 ALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDA-LGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHh-hCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999987654 455667799999999999999999999999999999998
Q ss_pred HH
Q 000838 234 LE 235 (1262)
Q Consensus 234 ~~ 235 (1262)
.+
T Consensus 234 ~~ 235 (263)
T COG1127 234 LA 235 (263)
T ss_pred Hh
Confidence 64
No 63
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.6e-39 Score=328.40 Aligned_cols=203 Identities=28% Similarity=0.360 Sum_probs=178.1
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.+++++.+. +.++|++|||++|++||+++|+||||+||||||++|.|... +.+|+|.++|.+
T Consensus 7 ~~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~ 71 (263)
T COG1127 7 PLIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGED 71 (263)
T ss_pred ceEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcc
Confidence 467888988765 46789999999999999999999999999999999999887 458999999988
Q ss_pred CCc------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCC
Q 000838 771 KKH------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-RQSLVGLPGVN 843 (1262)
Q Consensus 771 ~~~------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~ 843 (1262)
+.. ...++.+|+++|+-.+|..+||+||+.|..+ .....+++..++.+..-++.+||... .+.. +.
T Consensus 72 i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplr--e~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----Ps 144 (263)
T COG1127 72 IPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLR--EHTKLPESLIRELVLMKLELVGLRGAAADLY-----PS 144 (263)
T ss_pred hhccCHHHHHHHHhheeEEeeccccccccchhHhhheehH--hhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----ch
Confidence 642 2456789999999999999999999999754 33456677778888888999999887 5554 56
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+||||++||++||||++.+|+|+++||||+||||.++..+-++|+++.+. |.|++++|||.. +++...|++.
T Consensus 145 ELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~ 217 (263)
T COG1127 145 ELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVA 217 (263)
T ss_pred hhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEE
Confidence 89999999999999999999999999999999999999999999999877 999999999986 6888888853
No 64
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=355.05 Aligned_cols=200 Identities=28% Similarity=0.375 Sum_probs=179.1
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|++..+. +..+++|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 467888887763 1228999999999999999999999999999999999877 4689999999987
Q ss_pred Cc-ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 772 KH-ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 772 ~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
+. ...+|.+++|+|+..++|+|||+||+.|+.+.+. .++++.+++++++.+.|+|.+..|++ +++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 65 3456889999999999999999999999987764 35677888899999999999999987 458999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||+|||||+++|+++|||||.|+||+..+..+...|+++.++ |.|+|.+|||.. |.+.+.|+.
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri 204 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRI 204 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEE
Confidence 9999999999999999999999999999999999999999876 899999999974 788899984
No 65
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=320.39 Aligned_cols=196 Identities=22% Similarity=0.303 Sum_probs=166.7
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCC---CCCeeEEEEEEC
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGSIKIS 767 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~---~~~~~~G~i~~~ 767 (1262)
..+.++|+++.|. ++++|+|||+.|++++++|++|||||||||||+++.... ++...+|+|.++
T Consensus 6 ~~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~ 72 (253)
T COG1117 6 PAIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLD 72 (253)
T ss_pred ceeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEEC
Confidence 3567788887773 567999999999999999999999999999999999853 233678999999
Q ss_pred CccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000838 768 GYPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGV 842 (1262)
Q Consensus 768 g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 842 (1262)
|+++-. ...|+.+|.|+|.+..|| +|++||+.|+.++....+ ++.++.|++.|+...|++........ ..
T Consensus 73 g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~-sa 147 (253)
T COG1117 73 GKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHK-SA 147 (253)
T ss_pred CeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhC-Cc
Confidence 988632 356889999999999999 999999999988875443 56778899999999998644333222 23
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 905 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 905 (1262)
.+|||||+||+||||||+.+|+|||||||||+|||.+...|-++|.+++ +.-|||++||.+.
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq 209 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ 209 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH
Confidence 5799999999999999999999999999999999999999999999997 4689999999764
No 66
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.1e-38 Score=342.26 Aligned_cols=204 Identities=27% Similarity=0.372 Sum_probs=173.3
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+..+|+++.|. ++.+|+|+||++++||+++|+||||||||||||+|+|..+ +.+|+|.++|+++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 367889998884 4689999999999999999999999999999999999877 4589999999986
Q ss_pred Cc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 772 KH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAP-EVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
.. ..+.|.++|+||.......+||+|.+.++..-+... ....++.++.++++++.+|+.+.+++.+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 43 457789999999998888999999999875432211 1112334446899999999999999875 47999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhhc
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||+.|||||+++|+||+||||||+||...+.++++.++++.+ +|+|||+++||++. .....|+.+
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i 210 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLI 210 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEE
Confidence 999999999999999999999999999999999999999999985 49999999999874 455667643
No 67
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-38 Score=354.58 Aligned_cols=202 Identities=28% Similarity=0.392 Sum_probs=179.9
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|++..+. +..+++|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.+
T Consensus 4 ~~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~ 68 (352)
T COG3842 4 PALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGED 68 (352)
T ss_pred ceEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEE
Confidence 3678889887763 4679999999999999999999999999999999999887 458999999999
Q ss_pred CCc-ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000838 771 KKH-ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 771 ~~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGq 849 (1262)
+.. ...+|.+|+|+|+-.+||+|||.||+.|+.+++. ...+++.+++++++++.++|.+..+.+ +.+|||||
T Consensus 69 i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQ 141 (352)
T COG3842 69 ITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQ 141 (352)
T ss_pred CCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHH
Confidence 765 3457889999999999999999999999987442 334566778899999999999998886 45899999
Q ss_pred HHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 850 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 850 rqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||+|||||+.+|++||||||.|+||..-+.++...|+++.++ |.|.|++|||.. |.+.+-|++
T Consensus 142 qQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI 207 (352)
T COG3842 142 QQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRI 207 (352)
T ss_pred HHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccce
Confidence 99999999999999999999999999999999999999999765 999999999975 678888984
No 68
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.2e-38 Score=311.47 Aligned_cols=191 Identities=22% Similarity=0.372 Sum_probs=165.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-cceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
++||+||||||||||||+|+|+..|. +|+|++||.+.+...+ .|-+++++||+++|..+||.+|+.++..- +-
T Consensus 27 ~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~P---~L 100 (231)
T COG3840 27 IVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGLGLSP---GL 100 (231)
T ss_pred EEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcccCCc---cc
Confidence 48999999999999999999999998 9999999999865543 57899999999999999999999987531 10
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
+ -.++.+++++.++..+||..+.+ +.+.+|||||||||++||+|
T Consensus 101 k-------------------------------L~a~~r~~v~~aa~~vGl~~~~~-----RLP~~LSGGqRQRvALARcl 144 (231)
T COG3840 101 K-------------------------------LNAEQREKVEAAAAQVGLAGFLK-----RLPGELSGGQRQRVALARCL 144 (231)
T ss_pred c-------------------------------cCHHHHHHHHHHHHHhChhhHhh-----hCccccCchHHHHHHHHHHH
Confidence 0 11223456788999999999877 55668999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
+.+-+|++||||+|+|||.-+.++.+++.+++.++ +.|++++||+.+++.+.+|+++++++|+|.++|+.++..
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~-~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~ 218 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDER-KMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELL 218 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHh
Confidence 99999999999999999999999999999987654 556677888889999999999999999999999988764
No 69
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-38 Score=323.88 Aligned_cols=205 Identities=26% Similarity=0.292 Sum_probs=171.8
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|++..++ +++++|+|||++|++||+++|+|||||||||||++|.|... +.+|+|.+||.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 577889887774 35789999999999999999999999999999999999766 5689999999765
Q ss_pred Cc------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000838 772 KH------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLR-----LAPEVDSETRKMFIEEIMELVELNPLRQSLVGLP 840 (1262)
Q Consensus 772 ~~------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~-----~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~ 840 (1262)
.. +.+++.+||++|+..+.+.+||.+|+..+..-+ ..-+...++.+..+-+.|+.+|+.+.+-++.+
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-- 146 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-- 146 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc--
Confidence 32 346788999999999999999999998763211 11122334445567789999999998877644
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.|||||+|||+|||||+.+|+|+|.|||+++|||.+++.+|+.|+++.++ |.|||++.||... ..+.+|+++
T Consensus 147 ---~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Rii 219 (258)
T COG3638 147 ---TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRII 219 (258)
T ss_pred ---cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhhe
Confidence 69999999999999999999999999999999999999999999999865 9999999999753 345677754
No 70
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.1e-38 Score=342.33 Aligned_cols=195 Identities=30% Similarity=0.445 Sum_probs=166.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc---cceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+||||||||||||+|+|.++|. +|+|.++|+++.+... .+.++||||++...+.+||+|-+.+|..-+.
T Consensus 30 i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~- 105 (258)
T COG1120 30 ITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHL- 105 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCccc-
Confidence 48999999999999999999999998 9999999999876544 3789999999888889999999999753210
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
.++. ...++.++.+++.|+.+|+.+.++ +.+..|||||||||.|||
T Consensus 106 -~~~~----------------------------~~~~~D~~~v~~aL~~~~~~~la~-----r~~~~LSGGerQrv~iAr 151 (258)
T COG1120 106 -GLFG----------------------------RPSKEDEEIVEEALELLGLEHLAD-----RPVDELSGGERQRVLIAR 151 (258)
T ss_pred -cccc----------------------------CCCHhHHHHHHHHHHHhCcHHHhc-----CcccccChhHHHHHHHHH
Confidence 0100 011222346888999999999988 556689999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
||+++|+||+||||||+||...+.++++.++++++++ +.+|+++.||...+.++||++++|++|+++.+|++++++
T Consensus 152 ALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 152 ALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 9999999999999999999999999999999987654 456677899999999999999999999999999998765
No 71
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-38 Score=336.60 Aligned_cols=191 Identities=30% Similarity=0.455 Sum_probs=172.0
Q ss_pred ceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc---cCCc-ccccceEEEecCCCCCCCC
Q 000838 717 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGY---PKKH-ETFARISGYCEQNDIHSPF 792 (1262)
Q Consensus 717 ~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~---~~~~-~~~~~~~~~v~q~~~~~~~ 792 (1262)
...+++|||++|+.||++|++|||||||||||++|+|... +..|.|.+||. +.+. ....|.+|||+|+..+++.
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 4568999999999999999999999999999999999887 45899999998 5443 3456889999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCC
Q 000838 793 VTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 872 (1262)
Q Consensus 793 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPt 872 (1262)
|||.||+.|+..++ ....++.+.+.+++++|+.+.|++..+.+ +.+|||||||||++||||+..|++||||||+
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998777 33455667788899999999999998886 5689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 873 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 873 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
++||..-+.++.+.|+++.++ |.|++++|||+. ++++.+|++.
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvv 209 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVV 209 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEE
Confidence 999999999999999999876 999999999985 7999999953
No 72
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.5e-38 Score=330.84 Aligned_cols=181 Identities=27% Similarity=0.414 Sum_probs=154.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-------ccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-------PQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+|||||||||||++|.|+..|+ +|.|.++|.++.... +++.+|||+|+..++|++||.||+..++.
T Consensus 33 ~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~ 109 (226)
T COG1136 33 FVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLL 109 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHH
Confidence 48999999999999999999999998 999999998886543 24679999999999999999999999876
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
+.+.... +.++.++.+++.+||++..+ +.++..|||||||||
T Consensus 110 ~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~----~~~p~eLSGGqqQRV 151 (226)
T COG1136 110 IAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL----KKKPSELSGGQQQRV 151 (226)
T ss_pred HcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc----cCCchhcCHHHHHHH
Confidence 6542100 12345678899999987654 245778999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeE
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQI 224 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i 224 (1262)
+|||||+.+|++++.||||.+||+.++..|++.++++.+. .+++|+++||| +++...|||++.|.+|++
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd-~~lA~~~dr~i~l~dG~~ 220 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHD-PELAKYADRVIELKDGKI 220 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCC-HHHHHhCCEEEEEeCCee
Confidence 9999999999999999999999999999999999998764 35667778998 566779999999999984
No 73
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.9e-38 Score=354.42 Aligned_cols=194 Identities=31% Similarity=0.469 Sum_probs=169.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCC--CcccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGE--FVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~--~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++++||||||||||+|+|+|++.|+ +|+|.++|.+... ...++.+||++|++.+++.+||+|||.|.+.+++..
T Consensus 33 i~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~ 109 (293)
T COG1131 33 IFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLS 109 (293)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCC
Confidence 47999999999999999999999998 9999999988765 234578999999999999999999999999887531
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
. .+.+++++++++.+||.+.++ +.+++||+|||||++||+|
T Consensus 110 ~----------------------------------~~~~~~~~~~l~~~~L~~~~~-----~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 110 K----------------------------------EEAEERIEELLELFGLEDKAN-----KKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred h----------------------------------hHHHHHHHHHHHHcCCchhhC-----cchhhcCHHHHHHHHHHHH
Confidence 0 112346788999999998554 4556899999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFF 237 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~~ 237 (1262)
|+++|+++||||||+||||.++.++++.|+++++. ++++|+++||..+++..+||+|++|++|++++.|+.+++...+
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~~ 228 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEKF 228 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHhh
Confidence 99999999999999999999999999999998753 4467778999999999999999999999999999988876654
No 74
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-38 Score=316.16 Aligned_cols=187 Identities=29% Similarity=0.354 Sum_probs=170.4
Q ss_pred EEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEecCCCCCCCCCCHH
Q 000838 719 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH--ETFARISGYCEQNDIHSPFVTVH 796 (1262)
Q Consensus 719 ~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~lTv~ 796 (1262)
.+++||||+++.||++||+|||||||||+|++|++... |.+|.|.+||.+... ...++.+|.++.+..++..||++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 48999999999999999999999999999999999887 458999999988533 45788999999888899999999
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCC
Q 000838 797 ESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 876 (1262)
Q Consensus 797 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD 876 (1262)
|||.|.+++.. ....+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|+++++||||||||
T Consensus 94 Enl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 99999998864 4456677889999999999999999876 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 877 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 877 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
..+.+.+.+.++++.++|++||++||... |+..++|+++
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvi 204 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVI 204 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEE
Confidence 99999999999999888999999999874 7888999854
No 75
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-38 Score=314.91 Aligned_cols=191 Identities=29% Similarity=0.345 Sum_probs=168.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC--cccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF--VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+|||||||||+|++|++++.|+ +|+|+++|.+.... ..++.+|.++.+..++..||++|||.|-+++.+.
T Consensus 30 i~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~rEnl~~Fa~L~~l- 105 (245)
T COG4555 30 ITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTARENLKYFARLNGL- 105 (245)
T ss_pred EEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhhHHHHHHHHHHHhhh-
Confidence 58999999999999999999999999 99999999987543 3367899999888899999999999998877542
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
.+.+.+.+++++.+.|+|.++.|+.+| ++|-||||||+||||
T Consensus 106 ---------------------------------~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARA 147 (245)
T COG4555 106 ---------------------------------SRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARA 147 (245)
T ss_pred ---------------------------------hhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHH
Confidence 123345678889999999999998877 599999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|+.+|++++|||||||||..+++.+.+.++++. ..+.+|+..+|.++|+.++||++++|++|++++.|+.+++..
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k--~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK--NEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh--cCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 999999999999999999999999999998752 335677789999999999999999999999999999987754
No 76
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-37 Score=317.40 Aligned_cols=200 Identities=25% Similarity=0.367 Sum_probs=166.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+|||||||||||++|+|..+|+ +|+|.+||.++.... .++.+||++|++.+.+.+||.+|+..+...
T Consensus 32 ~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~ 108 (258)
T COG3638 32 MVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLG 108 (258)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcc
Confidence 58999999999999999999999998 999999998876543 247899999999999999999999987654
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
+. +.+. ...++.+ .+.+..+-+.|+.+|+.+.+.++.+ +|||||+|||+
T Consensus 109 ~~--s~~~---------slfglfs---------------k~dk~~Al~aLervgi~~~A~qra~-----~LSGGQQQRVa 157 (258)
T COG3638 109 YT--STWR---------SLFGLFS---------------KEDKAQALDALERVGILDKAYQRAS-----TLSGGQQQRVA 157 (258)
T ss_pred cc--hHHH---------HHhCCCC---------------HHHHHHHHHHHHHcCcHHHHHHHhc-----cCCcchhHHHH
Confidence 32 1111 1111111 1223445678999999998886654 69999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+++|+|+|.|||+++|||.+++++++.|++.++..+. |+++..|+.+.+.++||||+-|++|+++|+||++++.
T Consensus 158 IARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~-Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 158 IARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGI-TVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred HHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCC-EEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 999999999999999999999999999999999998876554 4555778899999999999999999999999998865
Q ss_pred H
Q 000838 235 E 235 (1262)
Q Consensus 235 ~ 235 (1262)
+
T Consensus 237 ~ 237 (258)
T COG3638 237 D 237 (258)
T ss_pred H
Confidence 4
No 77
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.5e-36 Score=344.26 Aligned_cols=201 Identities=27% Similarity=0.386 Sum_probs=174.1
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|++..+. ++.+|+||||++++||++||+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 6 ~~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~ 70 (306)
T PRK13537 6 APIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEP 70 (306)
T ss_pred ceEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEe
Confidence 4688999988773 3569999999999999999999999999999999999876 458999999988
Q ss_pred CCc--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 771 KKH--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 771 ~~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
... ...++.+||++|++.+++.+||+||+.|.+.++. .+..+.+++++++++.++|.+..++.+ ++||||
T Consensus 71 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (306)
T PRK13537 71 VPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGG 142 (306)
T ss_pred cccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHH
Confidence 643 2356789999999999999999999998765542 233444556889999999998888765 479999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||++||+||+++|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++
T Consensus 143 ~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i 208 (306)
T PRK13537 143 MKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRL 208 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEE
Confidence 999999999999999999999999999999999999999999877999999999985 577778885
No 78
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1e-36 Score=300.89 Aligned_cols=185 Identities=23% Similarity=0.368 Sum_probs=164.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
++.|+||||||||||||+|.+...|+ .|+|++||.++.... .+|+||.|+||..+++..||.||+.|+.+.
T Consensus 30 f~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v 106 (223)
T COG2884 30 FVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRV 106 (223)
T ss_pred EEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeeccccccchHhhhhhhhhhc
Confidence 46799999999999999999999998 999999999986543 258999999999999999999999999877
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.+.. ..+++++|.++|+.+||.+.++ ..+.+|||||||||+
T Consensus 107 ~G~~----------------------------------~~~i~~rV~~~L~~VgL~~k~~-----~lP~~LSGGEQQRva 147 (223)
T COG2884 107 IGKP----------------------------------PREIRRRVSEVLDLVGLKHKAR-----ALPSQLSGGEQQRVA 147 (223)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHhccchhhh-----cCccccCchHHHHHH
Confidence 6531 2345677899999999999887 567789999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecC
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 229 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~ 229 (1262)
||||++.+|++|+.||||..|||..+.+|++++.++.+ .+|+|++.||+..-+...-.|++.|++|+++.+..
T Consensus 148 IARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 148 IARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 99999999999999999999999999999999998754 46788889999999999999999999999987654
No 79
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.7e-37 Score=328.87 Aligned_cols=191 Identities=25% Similarity=0.389 Sum_probs=167.4
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCC----CCcccceEEeecccc-CCCCCCCHHHHHHHHHhccC
Q 000838 2 TLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMG----EFVPQRTAAYISQHD-NHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 2 ~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~----~~~~~~~~~yv~Q~~-~~~~~lTv~e~l~f~~~~~~ 76 (1262)
++|+||||||||||+++|+|+++|. +|+|.++|.++. ....++.+|||+|++ ..+..-||.|.+.|+.++.+
T Consensus 33 ~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g 109 (235)
T COG1122 33 VLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLG 109 (235)
T ss_pred EEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhcC
Confidence 7899999999999999999999998 899999999865 233467899999994 56677899999999988765
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. .++.+++++++++.+||.+.++ +.+..|||||||||+||
T Consensus 110 ~~----------------------------------~~e~~~rv~~~l~~vgl~~~~~-----r~p~~LSGGqkqRvaIA 150 (235)
T COG1122 110 LP----------------------------------REEIEERVAEALELVGLEELLD-----RPPFNLSGGQKQRVAIA 150 (235)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHcCchhhcc-----CCccccCCcceeeHHhh
Confidence 31 1234567889999999999876 67788999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
.+|+.+|++++|||||||||+..+.++++.++++.+ .++.++++++|+.+.+..+||++++|++|+++++|++.++.+
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 999999999999999999999999999999999864 445667779999999999999999999999999999877654
No 80
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-37 Score=324.51 Aligned_cols=206 Identities=24% Similarity=0.359 Sum_probs=180.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-------cceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-------QRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+..|||-||||||||+++|.++.+|+ .|+|+++|.++...+. ++.+++|+|+..++|..||-||..|+.+
T Consensus 56 IfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLe 132 (386)
T COG4175 56 IFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 132 (386)
T ss_pred EEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhccee
Confidence 46899999999999999999999998 9999999999865532 4679999999999999999999999999
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.+|.. .+|+++++.++|+.+||+...+ .++++|||||||||
T Consensus 133 v~Gv~----------------------------------~~er~~~a~~~l~~VgL~~~~~-----~yp~eLSGGMqQRV 173 (386)
T COG4175 133 VQGVP----------------------------------KAEREERALEALELVGLEGYAD-----KYPNELSGGMQQRV 173 (386)
T ss_pred ecCCC----------------------------------HHHHHHHHHHHHHHcCchhhhh-----cCcccccchHHHHH
Confidence 88752 2234567788999999999887 67789999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
.|||||+.+|+|||+|||+|+|||--+.++.+.|.++.+.. ++||+.+|||.+|+.++.|||.+|++|+|+..|+++++
T Consensus 174 GLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l-~KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eI 252 (386)
T COG4175 174 GLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKL-KKTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEI 252 (386)
T ss_pred HHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHh-CCeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHH
Confidence 99999999999999999999999999999999888776544 45677799999999999999999999999999999998
Q ss_pred HHHHHhCCCCCCCCCChhhHHhhh
Q 000838 234 LEFFESMGFKCPQRKGVADFLQEV 257 (1262)
Q Consensus 234 ~~~~~~~g~~~p~~~~~~~~~~~~ 257 (1262)
+. .|.+..+++|...+
T Consensus 253 l~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 253 LL--------NPANDYVRDFVRNV 268 (386)
T ss_pred Hc--------CccHHHHHHHHhcC
Confidence 64 46665666666554
No 81
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-36 Score=313.95 Aligned_cols=189 Identities=25% Similarity=0.315 Sum_probs=163.6
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc----ccceEEeecccc--CCCCCCCHHHHHHHHHhcc
Q 000838 2 TLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV----PQRTAAYISQHD--NHIGEMTVRETLAFSARCQ 75 (1262)
Q Consensus 2 ~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~ 75 (1262)
.+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+.+|+||+ .+-|..||++.|.-+....
T Consensus 36 lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~ 112 (252)
T COG1124 36 LGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPH 112 (252)
T ss_pred EEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCcchhHHHHHhhhhccC
Confidence 6899999999999999999999998 999999998876543 357899999996 5778899999998876543
Q ss_pred CCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcc-cccccccCCcccccccccchhhH
Q 000838 76 GVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDN-CADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
+.. +.++++.++++.+||++ .++ +++..||||||||++
T Consensus 113 ~~~------------------------------------~~~~~i~~~L~~VgL~~~~l~-----R~P~eLSGGQ~QRia 151 (252)
T COG1124 113 GLS------------------------------------KSQQRIAELLDQVGLPPSFLD-----RRPHELSGGQRQRIA 151 (252)
T ss_pred Ccc------------------------------------HHHHHHHHHHHHcCCCHHHHh-----cCchhcChhHHHHHH
Confidence 221 11223678999999976 444 788899999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|++|+||||||+||+..+.+|+++|.++.+ ..+.+.++++||...+..+||||+||++|++++.++.+++.
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~-~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK-ERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH-hcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 99999999999999999999999999999999998755 45677888999999999999999999999999999999875
Q ss_pred H
Q 000838 235 E 235 (1262)
Q Consensus 235 ~ 235 (1262)
.
T Consensus 231 ~ 231 (252)
T COG1124 231 S 231 (252)
T ss_pred c
Confidence 4
No 82
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.4e-36 Score=342.48 Aligned_cols=204 Identities=24% Similarity=0.287 Sum_probs=172.8
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+... ...+.+|+||||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5688998877421 012469999999999999999999999999999999999877 45899999998764
Q ss_pred cc------cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 773 HE------TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~~------~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
.. ..++.+||++|+..+++.+||.||+.+..... ..+.++.++++.++++.+||.+..|..+ .+||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23668999999999999999999999876543 2344555667899999999998887764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||||+|||||+.+|++|++|||||+||+.++..+++.|+++.++ |.|||++||++. .+.+.+|++.
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~ 212 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVA 212 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999865 999999999975 4667788853
No 83
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-36 Score=322.28 Aligned_cols=192 Identities=26% Similarity=0.397 Sum_probs=159.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccc---cCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQH---DNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~---~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+||||||||||+|+|+|+++|. +|+|.++|.+......+..||||||. |+-| ..||+|.+..+..-+.
T Consensus 32 ~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~f-P~tV~d~V~~g~~~~~- 106 (254)
T COG1121 32 ITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSF-PITVKDVVLLGRYGKK- 106 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCC-CcCHHHHHHccCcccc-
Confidence 58999999999999999999999998 99999999988766556789999995 3344 4799999998743221
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
.++.. ...+.++.++++|+.+|+.+.+|..+| .|||||+|||-|||
T Consensus 107 -g~~~~----------------------------~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGGQ~QRV~lAR 152 (254)
T COG1121 107 -GWFRR----------------------------LNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGGQKQRVLLAR 152 (254)
T ss_pred -ccccc----------------------------ccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcHHHHHHHHHH
Confidence 01100 011224568899999999999986555 69999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
||+++|++|+|||||+|+|+.++..+.++|+++.++ +.+|+++|||...+.++||+|+.|+ +++++.|+++++.
T Consensus 153 AL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~ 226 (254)
T COG1121 153 ALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVL 226 (254)
T ss_pred HhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhcc
Confidence 999999999999999999999999999999998653 5667789999999999999999885 4677899988764
No 84
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.4e-37 Score=307.38 Aligned_cols=192 Identities=28% Similarity=0.352 Sum_probs=169.1
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEecCCCCCCC
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHE----TFARISGYCEQNDIHSP 791 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~~ 791 (1262)
+++.+++|||+.+++||++|++|||||||||.+.++.|... +.+|+|.+||.+++.. ..+.-+||+||++..|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 46789999999999999999999999999999999999887 4589999999987642 23446899999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCC
Q 000838 792 FVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 871 (1262)
Q Consensus 792 ~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEP 871 (1262)
.+||+||+......+.. +....+++.+++++|+.+++.|.++++. ..||||||||+.|||||+.+|+.++||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999887766542 2233456667889999999999999874 36999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 872 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 872 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
++|+||.+..+|+++++.++++|..|++|-|+.+ |.....|+++
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaY 210 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAY 210 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEE
Confidence 9999999999999999999999999999999986 6788889863
No 85
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=349.60 Aligned_cols=191 Identities=25% Similarity=0.352 Sum_probs=165.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+|||||||||||++|+|+.+|+ +|+|.++|.++.... .++.++||+|++.++|.+||+||+.|+.+.++..
T Consensus 32 ~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~- 107 (356)
T PRK11650 32 FIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIRGMP- 107 (356)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhcCCC-
Confidence 47999999999999999999999998 999999999886543 2468999999999999999999999986533210
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..+.+++++++++.+||++..+ +++++|||||||||+|||||
T Consensus 108 ---------------------------------~~~~~~~~~~~l~~~gL~~~~~-----~~~~~LSgGq~QRvalARAL 149 (356)
T PRK11650 108 ---------------------------------KAEIEERVAEAARILELEPLLD-----RKPRELSGGQRQRVAMGRAI 149 (356)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCChhHhh-----CChhhCCHHHHHHHHHHHHH
Confidence 1112345778999999988776 56678999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
+.+|++++||||||+||+.++.++.+.|+++.+. .+++++++||+..++..+||+|++|++|+++..|+++++.
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~ 223 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRR-LKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVY 223 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHH
Confidence 9999999999999999999999999999987543 3566777999999999999999999999999999998874
No 86
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-36 Score=345.63 Aligned_cols=201 Identities=26% Similarity=0.369 Sum_probs=173.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|++..++ +.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i 68 (356)
T PRK11650 3 GLKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVV 68 (356)
T ss_pred EEEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 367888887762 12469999999999999999999999999999999999876 4689999999876
Q ss_pred Cc-ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 772 KH-ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 772 ~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
.. ...++.+|||+|++.++|.+||+||+.|+...+ ..+..+.+++++++++.+||.+..+..+ .+||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~ 140 (356)
T PRK11650 69 NELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQR 140 (356)
T ss_pred CCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHH
Confidence 43 223478999999999999999999999986543 2344555677899999999998888764 57999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.++ |.|+|++|||+. ++.+..|++
T Consensus 141 QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i 205 (356)
T PRK11650 141 QRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRV 205 (356)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999999775 999999999984 678888985
No 87
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1e-35 Score=324.57 Aligned_cols=201 Identities=23% Similarity=0.299 Sum_probs=167.4
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 467888877631 12469999999999999999999999999999999999876 45899999998753
Q ss_pred c------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 773 H------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
. ..+++.++|++|++.+++.+||.||+.+....+. ...++.+++++++++.+|+.+..++.+ .+||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 2 1245679999999999999999999998754321 223344556889999999988777654 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. .+...+|+.
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i 208 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRT 208 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEE
Confidence 99999999999999999999999999999999999999999999777999999999975 455566764
No 88
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=342.80 Aligned_cols=200 Identities=25% Similarity=0.385 Sum_probs=174.9
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.+||.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 578899988773 3468999999999999999999999999999999999877 4589999999876
Q ss_pred Ccc-cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 772 KHE-TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 772 ~~~-~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
... ..++.+|||+|+..++|.+||.||+.|+...+. .+..+.+++++++++.++|.+..++. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 432 235789999999999999999999999865432 34455667799999999999888776 457999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |+|+|++|||+. ++++..|++
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i 207 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTV 207 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999999765 899999999985 677888985
No 89
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-36 Score=346.55 Aligned_cols=191 Identities=23% Similarity=0.356 Sum_probs=165.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-cceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+|||||||||||++|+|+.+|+ +|+|.++|.++..... ++.++||+|++.++|.+||+||+.|+.+.++..
T Consensus 34 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~- 109 (351)
T PRK11432 34 MVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVP- 109 (351)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCC-
Confidence 47999999999999999999999998 9999999998865433 478999999999999999999999987543210
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..+.+++++++++.+||.+..+ ++++.|||||||||+|||||
T Consensus 110 ---------------------------------~~~~~~~v~~~l~~~gl~~~~~-----r~~~~LSgGq~QRVaLARaL 151 (351)
T PRK11432 110 ---------------------------------KEERKQRVKEALELVDLAGFED-----RYVDQISGGQQQRVALARAL 151 (351)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCchhhc-----CChhhCCHHHHHHHHHHHHH
Confidence 1122345788999999988766 56678999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
+.+|+++||||||||||+.++.++.+.|+++.+. .+++++++||+..++..++|+|++|++|+++..|+++++.
T Consensus 152 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~ 225 (351)
T PRK11432 152 ILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQ-FNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELY 225 (351)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999987543 3456777999999999999999999999999999998874
No 90
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.8e-36 Score=347.62 Aligned_cols=192 Identities=22% Similarity=0.354 Sum_probs=166.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .+|.++||+|+..+||.+||+||+.|+.+.++..
T Consensus 32 ~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~- 107 (353)
T TIGR03265 32 FVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNRGMG- 107 (353)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhcCCC-
Confidence 47999999999999999999999998 999999999886533 2468999999999999999999999986533210
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..+.+++++++++.+||++..| +.+++|||||||||+|||||
T Consensus 108 ---------------------------------~~~~~~~~~~~l~~l~L~~~~~-----~~~~~LSgGq~QRvaLARaL 149 (353)
T TIGR03265 108 ---------------------------------RAEVAERVAELLDLVGLPGSER-----KYPGQLSGGQQQRVALARAL 149 (353)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCCchhh-----CChhhCCHHHHHHHHHHHHH
Confidence 1122345788999999998776 56678999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
+.+|+++|||||||+||+.++.++.+.|+++.+. .+++++++||+..++..++|+|++|++|+++..|+++++.+
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~ 224 (353)
T TIGR03265 150 ATSPGLLLLDEPLSALDARVREHLRTEIRQLQRR-LGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYR 224 (353)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999987543 34567779999999999999999999999999999988753
No 91
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=328.13 Aligned_cols=200 Identities=27% Similarity=0.345 Sum_probs=167.4
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 4678877763 2469999999999999999999999999999999999876 458999999987532
Q ss_pred ------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 774 ------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 774 ------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
..+++.++|++|++.+++.+||.||+.+...... ..+.++.+++++++++.+++.+..++.+ .+|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 2345679999999999999999999988643221 1233444566888999999987776654 47999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||++. ++.+.+|+++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~ 208 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIA 208 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEE
Confidence 9999999999999999999999999999999999999999999864 899999999975 4666778753
No 92
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.2e-36 Score=347.55 Aligned_cols=192 Identities=21% Similarity=0.341 Sum_probs=165.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCcee--EEEEECCccCCCCcc-cceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVS--GRVTYNGHNMGEFVP-QRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~--G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+|||||||||||++|+|+.+|+ + |+|.++|.++..... ++.++||+|++.++|.+||+||+.|+.+.++.
T Consensus 33 ~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~ 109 (362)
T TIGR03258 33 LLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQKM 109 (362)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999998 8 999999998864332 46799999999999999999999998754321
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
. ..+.+++++++++.+||++..| +.+++|||||||||+|||
T Consensus 110 ~----------------------------------~~~~~~~v~~~l~~~gL~~~~~-----~~~~~LSgGq~QRvaLAR 150 (362)
T TIGR03258 110 P----------------------------------KADIAERVADALKLVGLGDAAA-----HLPAQLSGGMQQRIAIAR 150 (362)
T ss_pred C----------------------------------HHHHHHHHHHHHHhcCCCchhh-----CChhhCCHHHHHHHHHHH
Confidence 0 0112345788999999998776 556789999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
||+.+|++++|||||||||+.++.++.+.|+++.+..++++++++||+.+++..++|+|++|++|+++..|+++++.
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999998754322566778999999999999999999999999999998874
No 93
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.3e-35 Score=343.32 Aligned_cols=200 Identities=26% Similarity=0.366 Sum_probs=174.8
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|++.++. .+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 477889988763 3468999999999999999999999999999999999876 4589999999876
Q ss_pred Cc-ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 772 KH-ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 772 ~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
.. ...+|.+|||+|+..++|.+||.||+.|+...+ ..+..+.+++++++++.++|.+..+.. +.+||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 43 224578999999999999999999999986543 234455667799999999999988876 457999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||+|||||+.+|++||||||+++||+.++..+.+.|+++.++ |.|+|++|||+. +++...|++
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i 205 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRI 205 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999998765 899999999985 678888985
No 94
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.8e-36 Score=343.31 Aligned_cols=191 Identities=21% Similarity=0.322 Sum_probs=164.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|+.+|+ +|+|.++|.++.... .++.++|++|+..+++..||+||+.++...
T Consensus 33 i~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~ 109 (343)
T TIGR02314 33 IYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLEL 109 (343)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHH
Confidence 47999999999999999999999998 999999999886542 245799999999999999999999997653
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.+.. ..+.++++.++++.+||++..| +++..|||||||||+
T Consensus 110 ~~~~----------------------------------~~~~~~~v~e~l~~vgL~~~~~-----~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 110 DNTP----------------------------------KDEIKRKVTELLALVGLGDKHD-----SYPSNLSGGQKQRVA 150 (343)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCCchhhh-----CChhhCCHHHHHHHH
Confidence 3210 0112345778899999998776 556789999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|++|+|||||||||+.++..+++.|+++.+.. +.+|+++||+.+.+.+.||+|++|++|++++.|+++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999999876533 456777999999999999999999999999999988764
No 95
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.9e-35 Score=342.00 Aligned_cols=201 Identities=26% Similarity=0.355 Sum_probs=174.1
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeE--EEEEECCc
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GSIKISGY 769 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~--G~i~~~g~ 769 (1262)
.+.++|+++++. .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 577889988773 24699999999999999999999999999999999998763 47 99999998
Q ss_pred cCCc-ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 770 PKKH-ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 770 ~~~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
+... ...++.+||++|+..++|.+||+||+.|+...+ ..+..+.+++++++++.++|.+..++.+ ++||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 223577999999999999999999999986543 2344556667999999999998888764 579999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++|||+. ++....|+++
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~ 210 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAG 210 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999999876 799999999975 5778888853
No 96
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7.7e-36 Score=343.91 Aligned_cols=192 Identities=20% Similarity=0.318 Sum_probs=165.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-------cceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-------QRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.++|.+||+||+.|+.+
T Consensus 21 i~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~TV~eNi~~~~~ 97 (363)
T TIGR01186 21 IFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHMTILQNTSLGPE 97 (363)
T ss_pred EEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999998 9999999999875432 4689999999999999999999999865
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
+.+.. .++.++++.++++.+||++..+ +++..|||||||||
T Consensus 98 ~~~~~----------------------------------~~~~~~~~~~~l~~vgL~~~~~-----~~p~~LSGGq~QRV 138 (363)
T TIGR01186 98 LLGWP----------------------------------EQERKEKALELLKLVGLEEYEH-----RYPDELSGGMQQRV 138 (363)
T ss_pred HcCCC----------------------------------HHHHHHHHHHHHHhcCCchhhh-----CChhhCCHHHHHHH
Confidence 43210 0112345778899999987766 55668999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|+|+||||||+|||+.++.++.+.++++.+. .+.+|++++|+.+++.++||+|++|++|+++..|+++++
T Consensus 139 ~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~-~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei 217 (363)
T TIGR01186 139 GLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQAT-LQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEI 217 (363)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 9999999999999999999999999999999999887543 345677799999999999999999999999999998887
Q ss_pred HH
Q 000838 234 LE 235 (1262)
Q Consensus 234 ~~ 235 (1262)
..
T Consensus 218 ~~ 219 (363)
T TIGR01186 218 LR 219 (363)
T ss_pred Hh
Confidence 53
No 97
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.7e-35 Score=337.72 Aligned_cols=202 Identities=25% Similarity=0.350 Sum_probs=173.7
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|++..+. ++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEE
Confidence 4688999998773 3569999999999999999999999999999999999877 458999999987
Q ss_pred CCc--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 771 KKH--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 771 ~~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
... ...++.+||++|++.+++.+|+.||+.+.+..+. .+..+.+++++++++.++|.+..++.+ ++||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHH
Confidence 642 2346789999999999999999999987665442 233334456788999999998888775 479999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||++||+||+++|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++.
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~ 243 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLC 243 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999999877999999999975 6777888853
No 98
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-35 Score=307.45 Aligned_cols=202 Identities=27% Similarity=0.316 Sum_probs=165.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+..+|++..++... ....+|+||||++.+||++||+|+||||||||.++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCccc
Confidence 467888888775322 11269999999999999999999999999999999999877 4589999999775
Q ss_pred Ccc----cccceEEEecCCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCC
Q 000838 772 KHE----TFARISGYCEQNDI--HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLR-QSLVGLPGVNG 844 (1262)
Q Consensus 772 ~~~----~~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~ 844 (1262)
... .+.+.+.+|+||+. +.|..||++.|.-+.... ..++ .++++.++++.+||.+.. +.. +.+
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~---~~~~--~~~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPH---GLSK--SQQRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhccC---CccH--HHHHHHHHHHHcCCCHHHHhcC-----chh
Confidence 432 46788999999974 678999999987665432 2222 233389999999998643 333 568
Q ss_pred CCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 845 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 845 lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||||||++|||||+.+|++|++|||||+||+..+.+|++.|.++.++ |.|.|++|||.+ -+..++|++
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi 212 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRI 212 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhhe
Confidence 9999999999999999999999999999999999999999999999865 889999999976 355667764
No 99
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.4e-36 Score=346.61 Aligned_cols=191 Identities=26% Similarity=0.350 Sum_probs=164.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-cceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+|||||||||||++|+|+.+|+ +|+|.++|.++..... ++.++||+|++.++|.+||+||+.|+.+.++..
T Consensus 42 ~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~- 117 (375)
T PRK09452 42 FLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTP- 117 (375)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcCCC-
Confidence 47999999999999999999999998 9999999998865432 467999999999999999999999986533210
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..+.+++++++++.+||++..+ +++.+|||||||||+|||||
T Consensus 118 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~p~~LSgGq~QRVaLARaL 159 (375)
T PRK09452 118 ---------------------------------AAEITPRVMEALRMVQLEEFAQ-----RKPHQLSGGQQQRVAIARAV 159 (375)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCchhhh-----CChhhCCHHHHHHHHHHHHH
Confidence 0112345678899999998776 55678999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
+.+|+++||||||||||+.++.++.+.|+++.+.. +++++.+||+..++..++|+|++|++|+++..|+++++.
T Consensus 160 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~ 233 (375)
T PRK09452 160 VNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIY 233 (375)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999876533 456677999999999999999999999999999998874
No 100
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=6.7e-36 Score=292.20 Aligned_cols=183 Identities=27% Similarity=0.344 Sum_probs=158.1
Q ss_pred eceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEecCCCCCCCCCCHHHHHH
Q 000838 722 NGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH-ETFARISGYCEQNDIHSPFVTVHESLA 800 (1262)
Q Consensus 722 ~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~ 800 (1262)
=..++.|++||++||+||||||||||||.|+|... +.+|+|++||.+... ....|-++.++|+.++|..+||.+|+.
T Consensus 16 ~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 16 MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 35778999999999999999999999999999877 458999999998654 345677899999999999999999998
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHH
Q 000838 801 FSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 880 (1262)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~ 880 (1262)
++..-.+ ..+ .+.++.++.++..+||..+.+++. .+|||||||||++||+|+++-+||+||||+|.|||.-+
T Consensus 94 LGl~P~L--kL~-a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR 165 (231)
T COG3840 94 LGLSPGL--KLN-AEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALR 165 (231)
T ss_pred ccCCccc--ccC-HHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHH
Confidence 8643221 122 345566999999999999998874 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 881 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 881 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
.++...+.+++++ +.|++++||+|+ +.....|+.
T Consensus 166 ~eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~ 200 (231)
T COG3840 166 AEMLALVSQLCDERKMTLLMVTHHPE-DAARIADRV 200 (231)
T ss_pred HHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhce
Confidence 9999999999865 899999999996 566666764
No 101
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-35 Score=320.20 Aligned_cols=198 Identities=29% Similarity=0.395 Sum_probs=165.1
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4677777663 2469999999999999999999999999999999999876 458999999987642
Q ss_pred -ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000838 774 -ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKR 852 (1262)
Q Consensus 774 -~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr 852 (1262)
...++.++|++|++.+++.+|++||+.+..... ....+..++.++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 223467999999998888999999998764332 1223344556889999999988777654 4799999999
Q ss_pred HHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 853 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 853 l~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|++
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v 201 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRI 201 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEE
Confidence 99999999999999999999999999999999999998764 899999999975 455667764
No 102
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.6e-35 Score=320.90 Aligned_cols=201 Identities=29% Similarity=0.397 Sum_probs=165.1
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++.. +..+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhh
Confidence 467887766310 011569999999999999999999999999999999999876 458999999987532
Q ss_pred c-------cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 774 E-------TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 774 ~-------~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
. ..++.++|++|++.+++.+|++||+.+....+. ......++.++++++.+|+.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcC
Confidence 1 124579999999999999999999998754432 222334456889999999987776653 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhh
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||++.. + +.+|++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v 210 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRI 210 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEE
Confidence 9999999999999999999999999999999999999999999987 58999999999863 3 366764
No 103
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.5e-35 Score=340.07 Aligned_cols=200 Identities=24% Similarity=0.331 Sum_probs=174.0
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 578899988773 3469999999999999999999999999999999999876 4589999999876
Q ss_pred Cc-ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 772 KH-ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 772 ~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
.. ...++.+||++|+..++|.+||.||+.|+...+ ..+..+.+++++++++.++|.+..++.+ .+||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 43 223577999999999999999999999986543 2344455667899999999998888764 57999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|+|++|||+. +++...|++
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri 215 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRI 215 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999999865 999999999975 678888985
No 104
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-35 Score=317.76 Aligned_cols=197 Identities=25% Similarity=0.380 Sum_probs=165.9
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.+. ++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 4677777652 2469999999999999999999999999999999999876 458999999987643
Q ss_pred ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000838 774 ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRL 853 (1262)
Q Consensus 774 ~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl 853 (1262)
..++.++|++|++.+++.+|+.||+.+....+. ......++.++++++.+++.+..++.+ .+||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHH
Confidence 345679999999999999999999988654432 223344556889999999987776653 47999999999
Q ss_pred HHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 854 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 854 ~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+||+||+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+..|+.
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i 198 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRV 198 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEE
Confidence 9999999999999999999999999999999999998877899999999975 455567764
No 105
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=4.2e-35 Score=338.97 Aligned_cols=203 Identities=26% Similarity=0.388 Sum_probs=172.7
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 66788887763 3469999999999999999999999999999999999876 45899999998764
Q ss_pred c-ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 773 H-ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLA-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 773 ~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
. ...++.++|++|++.++|.+||.||+.|....+.. ...+.++.+++++++++.++|.+..++.+ .+||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 3 22346799999999999999999999997653211 12344555667899999999998877764 57999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++....|+++
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~ 208 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVV 208 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 9999999999999999999999999999999999999999876 899999999985 6777888853
No 106
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-35 Score=318.85 Aligned_cols=201 Identities=27% Similarity=0.385 Sum_probs=165.8
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~- 69 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVT- 69 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECc-
Confidence 467777766310 011569999999999999999999999999999999999876 45899999998764
Q ss_pred ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000838 774 ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRL 853 (1262)
Q Consensus 774 ~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl 853 (1262)
..++.++|++|++.+++.+|++||+.+....+. ...+...+.++++++.+++.+..++.+ ..||||||||+
T Consensus 70 -~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 70 -GPGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred -cccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 235679999999998888999999988654332 223344556889999999987776653 47999999999
Q ss_pred HHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhhc
Q 000838 854 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 854 ~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||++||++. ++.+.+|+.+
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~ 203 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVV 203 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999865 4899999999975 4556677643
No 107
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-35 Score=338.28 Aligned_cols=201 Identities=25% Similarity=0.358 Sum_probs=174.1
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+
T Consensus 18 ~~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~ 82 (377)
T PRK11607 18 PLLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVD 82 (377)
T ss_pred ceEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEE
Confidence 3588999988763 2468999999999999999999999999999999999876 458999999987
Q ss_pred CCc-ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000838 771 KKH-ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 771 ~~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGq 849 (1262)
... ...++.+||++|+..++|.+||.||+.|+...+ ..+..+.+++++++++.++|.+..+.. +.+|||||
T Consensus 83 i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq 154 (377)
T PRK11607 83 LSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQ 154 (377)
T ss_pred CCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHH
Confidence 643 234678999999999999999999999976543 224455667789999999999887776 45799999
Q ss_pred HHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 850 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 850 rqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||+|||||+.+|++|||||||++||+.++..+.+.|+++.++ |.|+|++|||+. +++...|+.
T Consensus 155 ~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri 220 (377)
T PRK11607 155 RQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRI 220 (377)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEE
Confidence 99999999999999999999999999999999999999998764 899999999975 678888985
No 108
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-35 Score=318.81 Aligned_cols=198 Identities=28% Similarity=0.350 Sum_probs=166.5
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCc
Confidence 4677877663 3469999999999999999999999999999999999876 458999999976532
Q ss_pred --ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000838 774 --ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRK 851 (1262)
Q Consensus 774 --~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 851 (1262)
...++.++|++|++.+++.+||+||+.+....+. ...++.+++++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHH
Confidence 2345679999999999999999999988754432 223334556889999999988777664 479999999
Q ss_pred HHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 852 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 852 rl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|++||+|++.+|++++|||||+|||+.++..+.+.|+++.++ |+|||++||++. ++.+..|++
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i 202 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRV 202 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 999999999999999999999999999999999999999876 899999999975 455667774
No 109
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6.7e-35 Score=317.78 Aligned_cols=200 Identities=26% Similarity=0.314 Sum_probs=166.6
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 45778887662 12469999999999999999999999999999999999876 45899999998754
Q ss_pred cc------cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 773 HE------TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~~------~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
.. .+++.++|++|++.+++.+|+.||+.+....+. ...+..+++++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 245679999999999989999999988754321 223334556889999999987666653 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+.+|++
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i 207 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRV 207 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEE
Confidence 99999999999999999999999999999999999999999998777999999999975 455567764
No 110
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-36 Score=311.38 Aligned_cols=186 Identities=26% Similarity=0.408 Sum_probs=164.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-------ccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-------PQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+|||-|+||||||||+|+|+|+..|+ +|.|.+||+.+.+.. .+|.+|||+||-.+||.+||+.||.|+..
T Consensus 26 vTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tVrgNL~YG~~ 102 (352)
T COG4148 26 ITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTVRGNLRYGMW 102 (352)
T ss_pred eEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEEecchhhhhc
Confidence 58999999999999999999999999 999999998764321 25789999999999999999999999763
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.. .....+++.+.||++|..+ +++..|||||||||
T Consensus 103 ~~----------------------------------------~~~~fd~iv~lLGI~hLL~-----R~P~~LSGGEkQRV 137 (352)
T COG4148 103 KS----------------------------------------MRAQFDQLVALLGIEHLLD-----RYPGTLSGGEKQRV 137 (352)
T ss_pred cc----------------------------------------chHhHHHHHHHhCcHHHHh-----hCCCccCcchhhHH
Confidence 21 0112467889999999887 77889999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|+|||++.|++|+||||.+.||-.-..+++-.|+++.++ -+.-|+.++|..+|+.+++|+|++|++|+|...|+.+++
T Consensus 138 AIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e-~~IPIlYVSHS~~Ev~RLAd~vV~le~GkV~A~g~~e~v 216 (352)
T COG4148 138 AIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDE-INIPILYVSHSLDEVLRLADRVVVLENGKVKASGPLEEV 216 (352)
T ss_pred HHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHh-cCCCEEEEecCHHHHHhhhheEEEecCCeEEecCcHHHH
Confidence 9999999999999999999999999999999999988653 456788899999999999999999999999999999987
Q ss_pred HH
Q 000838 234 LE 235 (1262)
Q Consensus 234 ~~ 235 (1262)
.+
T Consensus 217 ~~ 218 (352)
T COG4148 217 WG 218 (352)
T ss_pred hc
Confidence 53
No 111
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.2e-35 Score=283.28 Aligned_cols=189 Identities=27% Similarity=0.389 Sum_probs=163.8
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEecCCCC
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH-------ETFARISGYCEQNDI 788 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~ 788 (1262)
+...||++|++.|++||-+||+|||||||||||-+++|... +.+|+|.+.|++... .-+.+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 45789999999999999999999999999999999999877 458999999988532 124578999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcce
Q 000838 789 HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 868 (1262)
Q Consensus 789 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illl 868 (1262)
+.|+||..||+.....++.... .+.++...+.++.+||.+..+.+ +.+|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEEec
Confidence 9999999999999888875322 22344577899999999888776 458999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 869 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 869 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||-+||..+...|.+++-.+.++ |.|.|++||||. +...+|+.+
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~ 217 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQL 217 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhhee
Confidence 9999999999999999999888654 999999999986 666777654
No 112
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=342.38 Aligned_cols=191 Identities=20% Similarity=0.289 Sum_probs=164.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .++.+|||+|++.+||.+||.||+.|+.+.++..
T Consensus 47 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~- 122 (377)
T PRK11607 47 IFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLP- 122 (377)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCC-
Confidence 47999999999999999999999998 999999999886433 3568999999999999999999999986533210
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..+.+++++++++.+||.+..+ +++.+|||||||||+|||||
T Consensus 123 ---------------------------------~~~~~~~v~~~l~~l~L~~~~~-----~~~~~LSgGq~QRVaLARAL 164 (377)
T PRK11607 123 ---------------------------------KAEIASRVNEMLGLVHMQEFAK-----RKPHQLSGGQRQRVALARSL 164 (377)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCchhhc-----CChhhCCHHHHHHHHHHHHH
Confidence 0122345778899999988766 56678999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
+.+|++||||||||+||+.++.++.+.|+++.+.. +.+++.+||+..++..++|++++|++|+++..|+++++.
T Consensus 165 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~ 238 (377)
T PRK11607 165 AKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIY 238 (377)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHH
Confidence 99999999999999999999999999998876533 466777999999999999999999999999999998874
No 113
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=9.6e-35 Score=332.16 Aligned_cols=201 Identities=26% Similarity=0.344 Sum_probs=170.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 477889988763 3469999999999999999999999999999999999876 4589999999875
Q ss_pred Cc--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000838 772 KH--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 772 ~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGq 849 (1262)
.. ...++.+||++|++.+++.+|+.||+.+....+. .+..+.+++++++++.+++.+..++.+ .+|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 2345679999999999999999999987554321 233334456788999999988777764 4799999
Q ss_pred HHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 850 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 850 rqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|+++
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~ 206 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLC 206 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999999877999999999985 5667788753
No 114
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.3e-35 Score=334.87 Aligned_cols=188 Identities=28% Similarity=0.394 Sum_probs=163.0
Q ss_pred ceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEecCCCCCCCCCC
Q 000838 717 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH--ETFARISGYCEQNDIHSPFVT 794 (1262)
Q Consensus 717 ~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~lT 794 (1262)
++.+|+|+||++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 3579999999999999999999999999999999999876 458999999987642 234567999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCC
Q 000838 795 VHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 874 (1262)
Q Consensus 795 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsg 874 (1262)
|+||+.+.+.++. .+..+.+++++++++.++|.+..++.+ +.||||||||++||+||+++|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 233344556889999999988877764 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 875 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 875 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||+.++..+++.|++++++|+|||++||++. ++.+.+|++
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v 194 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRI 194 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEE
Confidence 9999999999999999877999999999975 566778875
No 115
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-36 Score=309.41 Aligned_cols=204 Identities=25% Similarity=0.346 Sum_probs=172.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCccc----ceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQ----RTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~----~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+|+|+|.++|+ +|+|.++|++++....+ ..++--+|...+|++|||-||+..++..+.
T Consensus 32 i~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~ 108 (250)
T COG0411 32 IVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLFPGLTVLENVAVGAHARL 108 (250)
T ss_pred EEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecccccccCCCcHHHHHHHHhhhhh
Confidence 47999999999999999999999999 99999999999876543 467888999999999999999999876442
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
. +... ... .....+..+..+++.++|+.+||.+.+|...| +||+|||||+.||
T Consensus 109 ~---~~~~---------l~~----------~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIA 161 (250)
T COG0411 109 G---LSGL---------LGR----------PRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIA 161 (250)
T ss_pred h---hhhh---------hcc----------ccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHH
Confidence 1 0000 000 00011223455678899999999999997776 4999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|||+.+|++|+||||.+||.+....++.+.|+++.+ +++.+|++|.|++..+..+||||+||+.|+++.+|+++++.+
T Consensus 162 rALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 162 RALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred HHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHhc
Confidence 999999999999999999999999999999999754 456788889999999999999999999999999999998853
No 116
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-35 Score=289.32 Aligned_cols=191 Identities=23% Similarity=0.368 Sum_probs=164.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
.++++||||||||||||+++|+.+|. .|+|.+||++++.-.. .-|.|+|++.++|.+|+.||+.|+.+++|..+
T Consensus 33 ~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k- 106 (259)
T COG4525 33 LVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVIDNVAFGLQLRGIEK- 106 (259)
T ss_pred EEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCCCc--cceeEeccCccchhhHHHHHHHHHHHhcCCCH-
Confidence 37899999999999999999999998 9999999998864322 34899999999999999999999999987632
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
.++.+++.+.+..+||++..+ +++-+|||||||||.|||||.
T Consensus 107 ---------------------------------~~R~~~a~q~l~~VgL~~~~~-----~~i~qLSGGmrQRvGiARALa 148 (259)
T COG4525 107 ---------------------------------AQRREIAHQMLALVGLEGAEH-----KYIWQLSGGMRQRVGIARALA 148 (259)
T ss_pred ---------------------------------HHHHHHHHHHHHHhCcccccc-----cceEeecchHHHHHHHHHHhh
Confidence 123456778899999998765 677889999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEec--CCeEEEecCcchHHHH
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLS--DGQIVYQGPRELVLEF 236 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~--~G~i~~~G~~~~~~~~ 236 (1262)
.+|+.|+||||+++||.-+++++.++|.++.+..++ -++.+||+.+|+.-++++++||+ .|+|+..=+++-...|
T Consensus 149 ~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk-~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~df~rR~ 225 (259)
T COG4525 149 VEPQLLLLDEPFGALDALTREQMQELLLDLWQETGK-QVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLDFARRY 225 (259)
T ss_pred cCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCC-eEEEEeccHHHHHhhhheeEEecCCCceeeEecCCCHHHHh
Confidence 999999999999999999999999999887665544 55669999999999999999997 6899987777654444
No 117
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=9.8e-35 Score=316.24 Aligned_cols=198 Identities=26% Similarity=0.372 Sum_probs=165.4
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ ++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 4677877663 2469999999999999999999999999999999999876 458999999987642
Q ss_pred c-cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000838 774 E-TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKR 852 (1262)
Q Consensus 774 ~-~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr 852 (1262)
. ..++.++|++|++.+++..|++||+.+....+ ....++.+++++++++.+|+.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 1 22457999999998888999999998865432 1233444556888999999987777664 4799999999
Q ss_pred HHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 853 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 853 l~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
++|||||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|++
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i 201 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRI 201 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeE
Confidence 99999999999999999999999999999999999999864 899999999974 455666764
No 118
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8.6e-35 Score=317.06 Aligned_cols=199 Identities=26% Similarity=0.343 Sum_probs=165.2
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 4677777663 12469999999999999999999999999999999999876 458999999987532
Q ss_pred ------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 774 ------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 774 ------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
...++.++|++|++.+++.+|+.||+.+....+. ...++.+++++++++.+|+.+..++.+ .+|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1245679999999999999999999988754332 233344556889999999987766653 47999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||++. .+.+.+|+.
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i 206 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRV 206 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999999999777999999999974 444556764
No 119
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-35 Score=316.44 Aligned_cols=202 Identities=25% Similarity=0.338 Sum_probs=174.0
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|++|.++. .+.+|+|+|+++++||.++|+|+||||||||+++|+|... +.+|.|.++|.+.
T Consensus 3 ~i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~ 68 (235)
T COG1122 3 MIEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDT 68 (235)
T ss_pred eEEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeec
Confidence 3568899988742 1479999999999999999999999999999999999887 4579999999885
Q ss_pred C----cccccceEEEecCCCCC-CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 772 K----HETFARISGYCEQNDIH-SPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 772 ~----~~~~~~~~~~v~q~~~~-~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
. ....++.+|||+|++.. +-.-||.|.+.|+..- ...+.++.+++++++++.+|+.+.+++. +..||
T Consensus 69 ~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LS 140 (235)
T COG1122 69 SSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRP-----PFNLS 140 (235)
T ss_pred cchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCC-----ccccC
Confidence 4 34578899999999854 3457999999998643 2445667888899999999999998776 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||||+||.+|+.+|++|+|||||||||+..+..+++.++++.++ |+|+|++|||.. .+.+..|+++
T Consensus 141 GGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~ 210 (235)
T COG1122 141 GGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVV 210 (235)
T ss_pred CcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEE
Confidence 99999999999999999999999999999999999999999999877 799999999974 4666677754
No 120
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=340.08 Aligned_cols=195 Identities=26% Similarity=0.386 Sum_probs=164.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-cceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+|||||||||||++|+|+++|+ +|+|.++|+++..... ++.++||+|++.++|.+||+||+.|+........
T Consensus 30 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~ 106 (353)
T PRK10851 30 MVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRE 106 (353)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhccccc
Confidence 47999999999999999999999998 9999999998864332 4679999999999999999999999764321000
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
. ....+.+++++++++.+||++..| +++..|||||||||+|||||
T Consensus 107 ~------------------------------~~~~~~~~~~~~~l~~~~L~~~~~-----~~~~~LSgGq~QRvalArAL 151 (353)
T PRK10851 107 R------------------------------PNAAAIKAKVTQLLEMVQLAHLAD-----RYPAQLSGGQKQRVALARAL 151 (353)
T ss_pred C------------------------------CCHHHHHHHHHHHHHHcCCchhhh-----CChhhCCHHHHHHHHHHHHH
Confidence 0 001122345778899999988766 55678999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
+.+|+++||||||+|||+.++.++.+.|+++.+ +.+.+++++||+..++..+||+|++|++|++++.|+++++.
T Consensus 152 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~-~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 152 AVEPQILLLDEPFGALDAQVRKELRRWLRQLHE-ELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999998754 33456777999999999999999999999999999998874
No 121
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=9.2e-35 Score=317.66 Aligned_cols=203 Identities=26% Similarity=0.384 Sum_probs=168.4
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+... .....+++|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 4578888776311 011269999999999999999999999999999999999876 45899999998764
Q ss_pred c--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 773 H--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 773 ~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
. ..+++.++|++|++.+++.+|+.||+.+....+. ...++..+.++++++.+|+.+..++.+ ..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 2 2345679999999999999999999987654331 233444566889999999988777654 47999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+..|+.
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i 206 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRV 206 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEE
Confidence 9999999999999999999999999999999999999999777999999999975 456667764
No 122
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=338.49 Aligned_cols=200 Identities=26% Similarity=0.367 Sum_probs=171.4
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367888887763 3469999999999999999999999999999999999876 4589999999876
Q ss_pred Cc-ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 772 KH-ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 772 ~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
.. ...++.+||++|+..+++.+||.||+.|....+. .+.++.+++++++++.+||.+..++.+ .+||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 43 2234679999999999999999999998765432 233445567899999999988777764 47999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|+|++|||+. ++....|++
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i 204 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKI 204 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999998765 899999999985 577788874
No 123
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5e-36 Score=297.99 Aligned_cols=193 Identities=20% Similarity=0.339 Sum_probs=167.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCccc----ceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQ----RTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~----~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++++|||||||||.+.++.|+.+|+ +|+|.+||.+++...+. ..+||+||++..|..+||+|||+-..+.+.
T Consensus 32 iVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~ 108 (243)
T COG1137 32 IVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFRKLTVEDNIMAVLEIRE 108 (243)
T ss_pred EEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhhcCcHHHHHHHHHhhhh
Confidence 47999999999999999999999999 99999999999876543 468999999999999999999998776542
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. ....+.+.+.+.+|+.|+|.|.++. ...+||||||||+.||
T Consensus 109 ~d--------------------------------~~~~~~~~~l~~LL~ef~i~hlr~~-----~a~sLSGGERRR~EIA 151 (243)
T COG1137 109 KD--------------------------------LKKAERKEELDALLEEFHITHLRDS-----KAYSLSGGERRRVEIA 151 (243)
T ss_pred cc--------------------------------hhHHHHHHHHHHHHHHhchHHHhcC-----cccccccchHHHHHHH
Confidence 10 0011234457889999999999984 3457999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|||+.+|+.++||||++|+||.+..+|.+.++.+.. ++.-|+++-|+..|....|||.+++++|++..+|+++++.+
T Consensus 152 RaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 152 RALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred HHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhc
Confidence 999999999999999999999999999999998743 35667778999999999999999999999999999998753
No 124
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.2e-35 Score=334.28 Aligned_cols=191 Identities=27% Similarity=0.379 Sum_probs=163.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc--ccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV--PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~--~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+|||+|++.+++.+||+||+.|.+.+++..
T Consensus 35 i~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 111 (306)
T PRK13537 35 CFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGLS 111 (306)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999998 999999999875432 3467999999999999999999999866543210
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
..+.+++++++++.++|.+.+++.+ ++||||||||++||+|
T Consensus 112 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~a 152 (306)
T PRK13537 112 ----------------------------------AAAARALVPPLLEFAKLENKADAKV-----GELSGGMKRRLTLARA 152 (306)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHHHHHHHHHHH
Confidence 0112234677899999998887554 5799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|+.+|++++|||||+|||+.++.++++.|+++.+ . +++|++++|+.+++.++||||++|++|++++.|+++++.+
T Consensus 153 L~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 153 LVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999998743 3 4667779999999999999999999999999999988754
No 125
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7.7e-35 Score=335.61 Aligned_cols=189 Identities=24% Similarity=0.276 Sum_probs=164.7
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---cc----cceEEEecCCCC
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHE---TF----ARISGYCEQNDI 788 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~~----~~~~~~v~q~~~ 788 (1262)
+.+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... .. ++.++||+|++.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 34669999999999999999999999999999999999887 4689999999886431 22 578999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcce
Q 000838 789 HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 868 (1262)
Q Consensus 789 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illl 868 (1262)
++|.+||+||+.|..... ..+.++.++++.++++.+||.+..++.+ ..|||||||||+|||||+.+|+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 2344556677899999999988877764 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 869 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 869 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||++||+.++..+++.++++.++ |+|||++|||.. ++....|++
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI 200 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRI 200 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 9999999999999999999999754 899999999975 467778885
No 126
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-35 Score=289.12 Aligned_cols=184 Identities=28% Similarity=0.406 Sum_probs=162.9
Q ss_pred eEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEecCCCCCCCCCCHHH
Q 000838 718 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHETFARISGYCEQNDIHSPFVTVHE 797 (1262)
Q Consensus 718 ~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e 797 (1262)
..+|+|+|+++.+||.++++||||||||||||+++|..+ +..|+|.+||.+++... ...|.|+|++.++|.+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCC--ccceeEeccCccchhhHHHH
Confidence 458999999999999999999999999999999999887 45899999999876432 23488999999999999999
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCH
Q 000838 798 SLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 877 (1262)
Q Consensus 798 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~ 877 (1262)
|+.|+.+++. .++.++.+.+.+.+..+||.+..++.+ -+||||||||+.|||||+.+|++|+||||.+.||.
T Consensus 94 NvafgL~l~G---i~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLRG---IEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhcC---CCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 9999998874 567788888999999999999887764 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000838 878 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 914 (1262)
Q Consensus 878 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 914 (1262)
-++++++++|-++.+ .|+.++++||+....+| +-++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ieEAlf-latr 202 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIEEALF-LATR 202 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHh-hhhe
Confidence 999999999999875 49999999999765544 3344
No 127
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.6e-35 Score=315.86 Aligned_cols=183 Identities=29% Similarity=0.372 Sum_probs=154.3
Q ss_pred eEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEecCCCC-CCCCCCHH
Q 000838 718 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHETFARISGYCEQNDI-HSPFVTVH 796 (1262)
Q Consensus 718 ~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~-~~~~lTv~ 796 (1262)
+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+......++.++|++|++. .+..+|+.
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999876 458999999987644445567999999974 33467999
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCC
Q 000838 797 ESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 876 (1262)
Q Consensus 797 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD 876 (1262)
||+.+..... . . .+++++++++.+|+.+..++.+ ..||||||||++|||||+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~---~-~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D-A---GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C-c---cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754321 1 1 1234788999999988777654 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 877 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 877 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+.++..+.+.|++++++|+|||++||++. ++.+..|+.
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i 196 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRV 196 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEE
Confidence 99999999999999777999999999975 355567764
No 128
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-34 Score=319.59 Aligned_cols=203 Identities=28% Similarity=0.383 Sum_probs=167.5
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 67888888763 2469999999999999999999999999999999999876 45899999998754
Q ss_pred cc-cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 773 HE-TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLA-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 773 ~~-~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
.. ..++.++|++|++.+++.+||.||+.+....+.. ......+.++.++++++.+++.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHH
Confidence 21 2245799999999998899999999886543211 00122334456788999999987776653 47999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|+++
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~ 208 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVV 208 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 9999999999999999999999999999999999999999865 899999999975 4566778753
No 129
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.9e-34 Score=316.63 Aligned_cols=210 Identities=36% Similarity=0.589 Sum_probs=171.1
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC-CeeEEEEEECCccC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGSIKISGYPK 771 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~-~~~~G~i~~~g~~~ 771 (1262)
+.|+|+++.+.... ..+.+++|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNWN---------KYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecCc---------cccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 45788887764210 135799999999999999999999999999999999997651 13589999999876
Q ss_pred CcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 772 KHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEE-IMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~-~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
.....++.++|++|++.+++.+|+.||+.+..................+++ .++.+++.+..++. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544556789999999999999999999998755432221122222233555 88889988776654 357999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|+|+++|++..++.+.+|+.+
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~ 215 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRIL 215 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEE
Confidence 999999999999999999999999999999999999999887789999999998777888999853
No 130
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=335.15 Aligned_cols=204 Identities=24% Similarity=0.276 Sum_probs=170.7
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|++++++.. ...+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5678888877411 013579999999999999999999999999999999999876 45899999998764
Q ss_pred cc------cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 773 HE------TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~~------~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
.. ..++.+||++|++.+++.+||.||+.+....+. .+.++.+++++++++.+||.+..++.+ .+||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 21 235679999999999999999999998754432 233445566889999999988777653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~ 212 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVA 212 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999765 899999999975 5666788753
No 131
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.4e-34 Score=320.32 Aligned_cols=202 Identities=28% Similarity=0.342 Sum_probs=166.0
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4567776653 2469999999999999999999999999999999999876 458999999987543
Q ss_pred c---c-ccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000838 774 E---T-FARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPE-------VDSETRKMFIEEIMELVELNPLRQSLVGLPGV 842 (1262)
Q Consensus 774 ~---~-~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~-------~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 842 (1262)
. . .++.++|++|++.+++.+||+||+.+....+.... ......++.++++++.+|+.+..++.+
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 1 1 23568999999999999999999988654321110 012334456889999999987776653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|+++
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~ 214 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVT 214 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEE
Confidence 579999999999999999999999999999999999999999999999877999999999985 4566778753
No 132
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.2e-34 Score=314.13 Aligned_cols=194 Identities=29% Similarity=0.387 Sum_probs=163.0
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ .+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 4677777663 2469999999999999999999999999999999999876 458999999987532
Q ss_pred -ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000838 774 -ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKR 852 (1262)
Q Consensus 774 -~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr 852 (1262)
...++.++|++|++.+++.+|+.||+.+....+. . .+++++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHH
Confidence 2345679999999999999999999988654321 1 1234788999999988777654 4799999999
Q ss_pred HHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 853 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 853 l~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
++||+|++.+|++++|||||+|||+.++..+.+.|++++++|+|+|++||++. ++.+..|++
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v 196 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRI 196 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEE
Confidence 99999999999999999999999999999999999998877899999999975 344556664
No 133
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.6e-34 Score=314.64 Aligned_cols=199 Identities=24% Similarity=0.324 Sum_probs=165.4
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ ++.+++|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 4677877663 2469999999999999999999999999999999999876 458999999987531
Q ss_pred -----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 774 -----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 774 -----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
...++.++|++|++.+++.+|+.||+.+...... ....++.+++++++++.+|+.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 2345779999999999999999999987642111 1223344556888999999987766653 579999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+..|+.
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i 205 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRV 205 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEE
Confidence 999999999999999999999999999999999999999999877899999999975 455667764
No 134
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.8e-34 Score=318.50 Aligned_cols=199 Identities=27% Similarity=0.352 Sum_probs=166.1
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ .+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4677777663 3469999999999999999999999999999999999876 458999999987532
Q ss_pred c---c-ccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000838 774 E---T-FARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 774 ~---~-~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGq 849 (1262)
. . .++.++|++|++.+++.+|++||+.+....+. ......++.++++++.+++.+..++.+ ..|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHH
Confidence 1 1 23568999999999999999999987643321 223334456788999999987776653 4799999
Q ss_pred HHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 850 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 850 rqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+..|+++
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~ 204 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAY 204 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999999877999999999975 5677778753
No 135
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-35 Score=339.97 Aligned_cols=191 Identities=24% Similarity=0.355 Sum_probs=162.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++||+|++.+++.+||+||+.|+...++..
T Consensus 31 ~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~- 106 (369)
T PRK11000 31 FVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAK- 106 (369)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcCCC-
Confidence 47999999999999999999999998 999999999876432 2467999999999999999999999976533210
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..+.+++++++++.+||++..+ +.+.+|||||||||+|||||
T Consensus 107 ---------------------------------~~~~~~~~~~~l~~lgL~~~~~-----~~~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 107 ---------------------------------KEEINQRVNQVAEVLQLAHLLD-----RKPKALSGGQRQRVAIGRTL 148 (369)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCChhhhc-----CChhhCCHHHHHHHHHHHHH
Confidence 0112345678899999988776 45568999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
+.+|+++||||||+|||+.++..+.+.|+++.+.. +++++++||+.+++..+||+|++|++|+++..|+++++.
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~ 222 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELY 222 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999875432 456777899999999999999999999999999988774
No 136
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=7e-35 Score=333.12 Aligned_cols=191 Identities=25% Similarity=0.348 Sum_probs=162.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC--cccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF--VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.+||++|++.+++.+||+||+.+.+.+++..
T Consensus 21 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~ 97 (302)
T TIGR01188 21 VFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRENLEMMGRLYGLP 97 (302)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999998 99999999887542 12457999999999999999999999876543210
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
..+.+++++++++.+||++..++. ++.|||||||||+||+|
T Consensus 98 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~a 138 (302)
T TIGR01188 98 ----------------------------------KDEAEERAEELLELFELGEAADRP-----VGTYSGGMRRRLDIAAS 138 (302)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCChhHhCCc-----hhhCCHHHHHHHHHHHH
Confidence 001123467889999998877744 45799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|+.+|++++|||||+|||+.++..+++.|+++.+ + +++|++++|+.+++.+.||++++|++|++++.|+++++.+
T Consensus 139 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 139 LIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 9999999999999999999999999999998753 3 4567779999999999999999999999999999888754
No 137
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.6e-34 Score=336.86 Aligned_cols=203 Identities=26% Similarity=0.346 Sum_probs=170.5
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||||+|+|..+ +.+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 467889988763 3579999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 772 KH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLA-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
.. ...++.+||++|++.+++.+||+|++.++...+.. .....+..+++++++++.+|+.+..++.+ ++|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 34567899999999998999999999875422110 01012234456899999999998887764 57999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||++|||||+++|++|+|||||+|||+.++.++++.|++++++|+|||+++|+++ ++.+.+|+.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adri 209 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDEL 209 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999999999877999999999975 566778885
No 138
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=316.18 Aligned_cols=203 Identities=25% Similarity=0.332 Sum_probs=166.0
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+... ...+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 47789998877421 012469999999999999999999999999999999999876 4589999999875
Q ss_pred Ccc------cc-cceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000838 772 KHE------TF-ARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNG 844 (1262)
Q Consensus 772 ~~~------~~-~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 844 (1262)
... .. ++.++|++|++.+++.+|++||+.+....+ ....++.+++++++++.+|+.+..++. +..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 421 12 256999999998899999999998865432 122334456688999999998776665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhh
Q 000838 845 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 845 lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||||||++||+|++.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||++.. .+.+|+.
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~--~~~~~~~ 215 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL--AKRMSRQ 215 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH--HHhhCEE
Confidence 999999999999999999999999999999999999999999999875 58999999999753 3345653
No 139
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.6e-34 Score=327.91 Aligned_cols=198 Identities=25% Similarity=0.371 Sum_probs=170.1
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|++.++. ++.+|+|+||++++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56788887763 3569999999999999999999999999999999999876 45899999998764
Q ss_pred c--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 773 H--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 773 ~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
. ...++.+||++|++.+++.+|+.||+.+.+.++. ...++.+++++++++.+||.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998765542 223344556889999999998887764 47999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||++||+||+++|++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+..|++
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i 202 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRV 202 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEE
Confidence 999999999999999999999999999999999999999864 799999999985 577788885
No 140
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-35 Score=321.06 Aligned_cols=191 Identities=27% Similarity=0.359 Sum_probs=158.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 104 (235)
T cd03261 28 ILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLRE 104 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhh
Confidence 47999999999999999999999998 999999998875432 245799999999899999999999986532
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
... . ..++..++++++++.+||.+..+ +.+..|||||||||+
T Consensus 105 ~~~-~--------------------------------~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgG~~qrv~ 146 (235)
T cd03261 105 HTR-L--------------------------------SEEEIREIVLEKLEAVGLRGAED-----LYPAELSGGMKKRVA 146 (235)
T ss_pred ccC-C--------------------------------CHHHHHHHHHHHHHHcCCchhhc-----CChhhCCHHHHHHHH
Confidence 100 0 00011234677899999987666 445679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++..+||++++|++|++++.|+++++
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 224 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEEL 224 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHH
Confidence 999999999999999999999999999999999987542 245677789999999999999999999999999987765
No 141
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.8e-34 Score=313.62 Aligned_cols=187 Identities=28% Similarity=0.372 Sum_probs=156.0
Q ss_pred eEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEecCCCC-CCCCC
Q 000838 718 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH---ETFARISGYCEQNDI-HSPFV 793 (1262)
Q Consensus 718 ~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 793 (1262)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 569999999999999999999999999999999999876 458999999987532 234567999999974 36678
Q ss_pred CHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCC
Q 000838 794 TVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 873 (1262)
Q Consensus 794 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPts 873 (1262)
|+.||+.+....+ .......++.++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764332 1223334456788999999987666653 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 874 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 874 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||+.++..+.+.|++++++|+|||++||++. ++...+|+.
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i 204 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRV 204 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEE
Confidence 99999999999999999877999999999975 455556764
No 142
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.3e-34 Score=296.43 Aligned_cols=189 Identities=22% Similarity=0.352 Sum_probs=172.5
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEecCCCCCCCCCCH
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHETFARISGYCEQNDIHSPFVTV 795 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv 795 (1262)
+++.+++|+||.++||+++|++|||||||||.+++|.|... +++|+|.++|.+.+. ..+.+|||.|.+--++|.+||
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~-~~~~rIGyLPEERGLy~k~tv 89 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQ-EIKNRIGYLPEERGLYPKMTV 89 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhh-hhhhhcccChhhhccCccCcH
Confidence 56789999999999999999999999999999999999987 468999999998764 345679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCC
Q 000838 796 HESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 875 (1262)
Q Consensus 796 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgL 875 (1262)
.|.|.|.+.++. ++.++.+..++.+|+.+++......++ ..||.|++|++.+-.+++++|++++||||+|||
T Consensus 90 ~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeLlILDEPFSGL 161 (300)
T COG4152 90 EDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPELLILDEPFSGL 161 (300)
T ss_pred HHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCEEEecCCccCC
Confidence 999999998874 566777888999999999998887764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 876 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 876 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||.+.+.+.+.+.+++++|.|||+++|+.. .+.+++|+.+
T Consensus 162 DPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~ll 201 (300)
T COG4152 162 DPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLL 201 (300)
T ss_pred ChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhh
Confidence 999999999999999999999999999975 6888999853
No 143
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-34 Score=317.42 Aligned_cols=204 Identities=25% Similarity=0.293 Sum_probs=167.7
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4577887766310 001369999999999999999999999999999999999876 45899999998754
Q ss_pred cc------cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 773 HE------TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~~------~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
.. ..++.++|++|++.+++.+|+.||+.+....+. .......+.++++++.+++.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 21 235679999999999999999999988654332 233344556889999999987777653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||++||+||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|+.+
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~ 212 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVA 212 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999765 899999999975 4566778753
No 144
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-34 Score=318.13 Aligned_cols=197 Identities=27% Similarity=0.364 Sum_probs=165.0
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 46788887663 2469999999999999999999999999999999999876 45899999998764
Q ss_pred cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000838 773 HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKR 852 (1262)
Q Consensus 773 ~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr 852 (1262)
. ..+.++|++|++.+++.+||.||+.+....+. ....+.+++++++++.+|+.+..++. +..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 2 23458999999998888999999987644321 23334455688999999998776665 35799999999
Q ss_pred HHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhh
Q 000838 853 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 853 l~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
++||+||+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||++. ++...+|+.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i 199 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATEL 199 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999854 5899999999985 556677774
No 145
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.1e-34 Score=313.28 Aligned_cols=202 Identities=24% Similarity=0.312 Sum_probs=164.0
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+... .+.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 4577888776311 012469999999999999999999999999999999999876 45899999998753
Q ss_pred cc---c---cc-ceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000838 773 HE---T---FA-RISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGL 845 (1262)
Q Consensus 773 ~~---~---~~-~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 845 (1262)
.. . ++ +.++|++|++.+++.+|++||+.+....+. ....+..+.+.++++.+|+.+..++.+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 21 1 22 579999999988889999999988654321 222333456788999999987766653 479
Q ss_pred CHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 846 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 846 SgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. .+ +.+|++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v 211 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRV 211 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEE
Confidence 999999999999999999999999999999999999999999999764 899999999985 33 445664
No 146
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4.6e-34 Score=312.82 Aligned_cols=200 Identities=25% Similarity=0.295 Sum_probs=165.4
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 45788887762 12469999999999999999999999999999999999876 45899999998653
Q ss_pred c---c---cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 773 H---E---TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~---~---~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
. . .+++.++|++|++.+++.+|+.||+.+....+ ..+.++.++.++++++.+++.+..++. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 2 1 24567999999998888899999998865432 123334445678899999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|.|+|++||+++ ++.+..|+.
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i 207 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRM 207 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEE
Confidence 99999999999999999999999999999999999999999999777899999999975 344556664
No 147
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.6e-34 Score=314.54 Aligned_cols=188 Identities=27% Similarity=0.410 Sum_probs=154.6
Q ss_pred eEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEecCCCCCC--CCCCH
Q 000838 718 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHETFARISGYCEQNDIHS--PFVTV 795 (1262)
Q Consensus 718 ~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~--~~lTv 795 (1262)
+.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|++.+. ..+|+
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999876 45899999998653 3456799999998763 33899
Q ss_pred HHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCC
Q 000838 796 HESLAFSAWLRLA-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 874 (1262)
Q Consensus 796 ~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsg 874 (1262)
.||+.+....... .....+..+++++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875422110 00111233456889999999987766653 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 875 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 875 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||+.++..+.+.|++++++|+|||++||++. ++.+..|+.
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i 202 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRV 202 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 9999999999999999877899999999975 455666764
No 148
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=2.8e-34 Score=306.48 Aligned_cols=179 Identities=27% Similarity=0.347 Sum_probs=150.8
Q ss_pred ceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-----ccccceEEEecCCCC-CC
Q 000838 717 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH-----ETFARISGYCEQNDI-HS 790 (1262)
Q Consensus 717 ~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~~-~~ 790 (1262)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 3569999999999999999999999999999999999876 458999999987531 134567999999973 23
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeC
Q 000838 791 PFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 870 (1262)
Q Consensus 791 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDE 870 (1262)
...|+.||+.+..... ..+.++.++.++++++.+|+.+..++.+ ..||||||||++|||||+.+|++++|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999998864322 1233344456889999999988777654 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000838 871 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 905 (1262)
Q Consensus 871 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 905 (1262)
||+|||+.++..+.+.|++++++|+|||++||++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999975
No 149
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.9e-32 Score=361.98 Aligned_cols=201 Identities=23% Similarity=0.350 Sum_probs=172.6
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|++..++. +++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 47889999887731 23579999999999999999999999999999999999876 458999999988
Q ss_pred CCc--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 771 KKH--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 771 ~~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
+.. ...++.+|||+|++.+++.+||+|++.|.++++. ...++.+++++++++.+||.+..++.+ ++||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2346779999999999999999999999876653 223344566899999999998887764 479999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 914 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 914 (1262)
||||++||+||+.+|+|++|||||+|||+.+++.+++.|++++ +|+|||++||++. ++....|+
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDr 1129 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDR 1129 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999985 5999999999975 45556776
No 150
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.5e-34 Score=316.20 Aligned_cols=200 Identities=23% Similarity=0.253 Sum_probs=163.6
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCC-----CCCeeEEEEEECC
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGSIKISG 768 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~-----~~~~~~G~i~~~g 768 (1262)
.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 4677777653 246999999999999999999999999999999999987 4 4689999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 843 (1262)
.+... ..+++.++|++|++.++ .+||+||+.+....+.. ...++.+++++++++.+|+.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87532 23456799999998887 79999999886543311 1222234568889999999876655420 25
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ +|||++||++. ++.+.+|+++
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~ 211 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTA 211 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEE
Confidence 79999999999999999999999999999999999999999999999876 99999999975 4566778753
No 151
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-34 Score=319.44 Aligned_cols=203 Identities=27% Similarity=0.282 Sum_probs=163.8
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.+.. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYPN------------GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecCC------------ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccc
Confidence 46777766531 1469999999999999999999999999999999999876 458999999987542
Q ss_pred ------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000838 774 ------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLR-----LAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGV 842 (1262)
Q Consensus 774 ------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~-----~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 842 (1262)
...++.++|++|++.+++.+||.||+.+..... ..........+++++++++.+++.+..++. +
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----A 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----c
Confidence 124567999999999999999999998753210 000111123345678899999998776665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.+||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++....|+++
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~ 216 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIV 216 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 579999999999999999999999999999999999999999999999764 899999999986 4566777753
No 152
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=3.9e-34 Score=309.93 Aligned_cols=185 Identities=24% Similarity=0.385 Sum_probs=156.9
Q ss_pred eEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC---c----ccccceEEEecCCCCCC
Q 000838 718 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK---H----ETFARISGYCEQNDIHS 790 (1262)
Q Consensus 718 ~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~---~----~~~~~~~~~v~q~~~~~ 790 (1262)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999876 45899999998742 1 12356799999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeC
Q 000838 791 PFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 870 (1262)
Q Consensus 791 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDE 870 (1262)
+.+|++||+.+....+ ........+.++++++.+|+.+..++.+ .+||||||||++|||||+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999999865432 1233344556889999999987777654 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000838 871 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 914 (1262)
Q Consensus 871 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 914 (1262)
||+|||+.++..+.+.|+++.++|.|+|++||++. +.+..|+
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~ 202 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADR 202 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCE
Confidence 99999999999999999998877999999999985 3345554
No 153
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.9e-34 Score=313.19 Aligned_cols=200 Identities=26% Similarity=0.392 Sum_probs=165.4
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.+.. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (220)
T cd03263 2 QIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRT 68 (220)
T ss_pred EEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 46777776631 11469999999999999999999999999999999999876 458999999987532
Q ss_pred --ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000838 774 --ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRK 851 (1262)
Q Consensus 774 --~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 851 (1262)
..+++.++|++|++.+++.+|++||+.+....+. ......++.++++++.++|.+..++.+ ..||+||||
T Consensus 69 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 140 (220)
T cd03263 69 DRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKR 140 (220)
T ss_pred chHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHH
Confidence 2345679999999999889999999988654432 223334456889999999987776653 479999999
Q ss_pred HHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 852 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 852 rl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+..|+++
T Consensus 141 rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~ 203 (220)
T cd03263 141 KLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIA 203 (220)
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEE
Confidence 99999999999999999999999999999999999999875 699999999986 4555677753
No 154
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.9e-34 Score=315.85 Aligned_cols=200 Identities=22% Similarity=0.317 Sum_probs=166.7
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 45778887663 2469999999999999999999999999999999999876 45899999998754
Q ss_pred c-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 773 H-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 773 ~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
. ...++.++|++|++.+++.+||.||+.+..... ......+.++.+.++++.+|+.+..+..+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRV--RGASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHh--cCCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 2 234567999999999999999999998754211 11233444556889999999987776653 57999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+..|+.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i 206 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRL 206 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999999999877999999999975 455667774
No 155
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-34 Score=297.19 Aligned_cols=190 Identities=22% Similarity=0.352 Sum_probs=157.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc----cceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP----QRTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||+||||||++|+|..++. +|+|.++|+|++.... ++.++||||....||.+||+|||..++..+.
T Consensus 31 iv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~ 107 (237)
T COG0410 31 IVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARR 107 (237)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhccc
Confidence 58999999999999999999999987 9999999999986644 3679999999999999999999998865432
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhC-CcccccccccCCcccccccccchhhHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLG-LDNCADILVGDEMIRGISGGQKKRVTT 155 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg-L~~~~~t~vg~~~~~~LSGGqkqRvsi 155 (1262)
... ..+...+++.+.|= |.+.++.+.| +|||||||.++|
T Consensus 108 ~~~-----------------------------------~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAi 147 (237)
T COG0410 108 DKE-----------------------------------AQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAI 147 (237)
T ss_pred ccc-----------------------------------cccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHH
Confidence 100 00001233344432 4444554444 699999999999
Q ss_pred HHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 156 GEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 156 A~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
||||+++|++|+|||||.||-|.-..+|++.++++.+. ++.+|+.+.|+...+.+.+||.+||.+|++++.|+.+++.
T Consensus 148 aRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~ 225 (237)
T COG0410 148 ARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELL 225 (237)
T ss_pred HHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHh
Confidence 99999999999999999999999999999999998653 4578888999999999999999999999999999998875
No 156
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=333.38 Aligned_cols=191 Identities=24% Similarity=0.350 Sum_probs=161.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 33 i~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~ 109 (343)
T PRK11153 33 IFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLEL 109 (343)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999998 999999999876432 145799999999999999999999987643
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.+.. ..+.+++++++++.+||++..+ +.+++|||||||||+
T Consensus 110 ~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~-----~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 110 AGTP----------------------------------KAEIKARVTELLELVGLSDKAD-----RYPAQLSGGQKQRVA 150 (343)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCCchhhh-----CChhhCCHHHHHHHH
Confidence 3210 0012234677899999988776 445679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|+++||||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.++||++++|++|++++.|+++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999987543 3456777899999999999999999999999999988764
No 157
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=7e-34 Score=317.47 Aligned_cols=200 Identities=27% Similarity=0.335 Sum_probs=166.6
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 67888887763 2469999999999999999999999999999999999876 45899999998653
Q ss_pred c-----------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000838 773 H-----------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPG 841 (1262)
Q Consensus 773 ~-----------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 841 (1262)
. ...++.++|++|++.+++.+|+.||+.+...... ....+..++.++++++.+|+.+..++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 1 1235679999999999989999999987543211 123334455688899999998776665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 842 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 842 ~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+..|+.
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i 214 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRA 214 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999999877999999999975 455667775
No 158
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.2e-34 Score=313.56 Aligned_cols=197 Identities=29% Similarity=0.404 Sum_probs=161.2
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ .+.+++|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (222)
T cd03224 2 EVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITG 66 (222)
T ss_pred EEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCC
Confidence 4677776552 2469999999999999999999999999999999999876 458999999987532
Q ss_pred c----cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCHH
Q 000838 774 E----TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELV-ELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 774 ~----~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~l~~~~~~~~~~~~~~~lSgG 848 (1262)
. ..++.++|++|++.+++.+|++||+.+....+. ....++.+.++++.+ ++.+..++. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 136 (222)
T cd03224 67 LPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGG 136 (222)
T ss_pred CCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHH
Confidence 1 124569999999999999999999988654321 122334466778877 466655654 3579999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||++. ++.+.+|+++
T Consensus 137 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~ 203 (222)
T cd03224 137 EQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAY 203 (222)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEE
Confidence 999999999999999999999999999999999999999999877899999999975 4566777753
No 159
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-34 Score=322.37 Aligned_cols=205 Identities=22% Similarity=0.304 Sum_probs=167.1
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++... ...+.+|+||||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 66888888764210 012469999999999999999999999999999999999876 45899999998764
Q ss_pred c-----ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 000838 773 H-----ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN--PLRQSLVGLPGVNG 844 (1262)
Q Consensus 773 ~-----~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~--~~~~~~~~~~~~~~ 844 (1262)
. ...++.+||++|++. .+...||+||+.|..... ..+.++.+++++++++.+||. +..++. ++.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 134578999999863 333579999999865432 234455566789999999997 555654 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 845 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 845 lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++...+|+++
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~ 216 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRII 216 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 9999999999999999999999999999999999999999999999765 899999999974 4566788853
No 160
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-34 Score=316.07 Aligned_cols=200 Identities=27% Similarity=0.358 Sum_probs=165.5
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++. .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 46777776631 1459999999999999999999999999999999999876 458999999987532
Q ss_pred ---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHH
Q 000838 774 ---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP--LRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 774 ---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~--~~~~~~~~~~~~~lSgG 848 (1262)
...++.++|++|++.+++.+|+.||+.+....+. .+.+..++.++++++.+++.+ ..++. +.+||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 2345678999999999999999999988654331 233344556889999999985 55554 3579999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+..|+++
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~ 207 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIA 207 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999999765 899999999975 4566677753
No 161
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.1e-34 Score=306.22 Aligned_cols=187 Identities=24% Similarity=0.316 Sum_probs=159.0
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 45678877663 3469999999999999999999999999999999999876 45899999998753
Q ss_pred c--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 773 H--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 773 ~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
. ...++.++|++|++.+++.+|+.||+.+....+. . ..+++++++++.+|+.+..++. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 2 2345678999999988899999999988654321 1 1234578899999998776665 357999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 905 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 905 (1262)
||++||+||+++|++++|||||+|||+.++..+.+.|++++++|+|||++||++.
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 190 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL 190 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh
Confidence 9999999999999999999999999999999999999998777899999999975
No 162
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-34 Score=321.04 Aligned_cols=190 Identities=25% Similarity=0.280 Sum_probs=160.2
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---c----ccceEEEecCCCC
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHE---T----FARISGYCEQNDI 788 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~----~~~~~~~v~q~~~ 788 (1262)
+.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 45679999999999999999999999999999999999876 4589999999875321 1 2357999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcce
Q 000838 789 HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 868 (1262)
Q Consensus 789 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illl 868 (1262)
+++.+|+.||+.+...... ......+++++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|
T Consensus 113 ~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999988654321 223344456888999999988777764 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 869 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 869 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+..|+.+
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~ 232 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIA 232 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 9999999999999999999998754 899999999975 4566778753
No 163
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.4e-34 Score=318.74 Aligned_cols=204 Identities=25% Similarity=0.264 Sum_probs=164.2
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 45677776652 02459999999999999999999999999999999999876 45899999998753
Q ss_pred c------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000838 773 H------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLR-----LAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPG 841 (1262)
Q Consensus 773 ~------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~-----~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 841 (1262)
. ..+++.++|++|++.+++.+|+.||+.+..... ..........+++++++++.+++.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 124567999999999999999999997642110 000111123345688899999998776665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 842 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 842 ~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||++. .+.+.+|+++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~ 217 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIV 217 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEE
Confidence 3579999999999999999999999999999999999999999999998764 899999999975 4556778753
No 164
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.6e-35 Score=343.09 Aligned_cols=193 Identities=21% Similarity=0.388 Sum_probs=157.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc---cceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
.||++||||+||||+.++|..+++|+ +|+|++||.|+.+.+. |++||+|.|||.+| +-||+|||.|+...
T Consensus 496 ~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLF-s~sI~eNI~YG~~~--- 568 (716)
T KOG0058|consen 496 VVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLF-SGSIRENIAYGLDN--- 568 (716)
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceee-cccHHHHHhcCCCC---
Confidence 48999999999999999999999999 9999999999987654 58999999999887 46999999998751
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
...+.+.++++ ..+..--..++++.+||.||++ +.+||||||||++|||
T Consensus 569 -~t~e~i~~AAk-----------------------------~ANah~FI~~~p~gY~T~VGEk-G~qLSGGQKQRIAIAR 617 (716)
T KOG0058|consen 569 -ATDEEIEAAAK-----------------------------MANAHEFITNFPDGYNTVVGEK-GSQLSGGQKQRIAIAR 617 (716)
T ss_pred -CCHHHHHHHHH-----------------------------HhChHHHHHhCccccccccCCc-cccccchHHHHHHHHH
Confidence 11122211111 1111123456899999999965 4579999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
||+.||+||||||.||+||+++...|.+.|.+.. +++| |++|.|. -...+.+|+|+|+++|++++.|+++++++
T Consensus 618 ALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~--~~rT-VlvIAHR-LSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 618 ALLRNPRVLILDEATSALDAESEYLVQEALDRLM--QGRT-VLVIAHR-LSTVRHADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred HHhcCCCEEEEechhhhcchhhHHHHHHHHHHhh--cCCe-EEEEehh-hhHhhhccEEEEEcCCeEEecccHHHHhh
Confidence 9999999999999999999999999999998754 3444 4556664 55678899999999999999999999864
No 165
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.3e-34 Score=329.82 Aligned_cols=191 Identities=26% Similarity=0.365 Sum_probs=162.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC--cccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF--VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.+||++|++.+++.+||+||+.+...+.+..
T Consensus 69 i~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 145 (340)
T PRK13536 69 CFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMS 145 (340)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999998 99999999987543 23467999999999999999999998755432210
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
..+..++++++++.+||.+.+++.+ ++||||||||++||+|
T Consensus 146 ----------------------------------~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 146 ----------------------------------TREIEAVIPSLLEFARLESKADARV-----SDLSGGMKRRLTLARA 186 (340)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHHHHHHHHHHH
Confidence 0011234567889999998887554 5799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|+.+|++++|||||+|||+.++.++++.|+++.+ . +++|++++|+.+++.++||+|++|++|++++.|+++++..
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999998754 3 4567779999999999999999999999999999988754
No 166
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1e-33 Score=318.60 Aligned_cols=202 Identities=21% Similarity=0.284 Sum_probs=167.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 478899988763 3469999999999999999999999999999999999876 4589999999875
Q ss_pred Ccc------cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000838 772 KHE------TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGL 845 (1262)
Q Consensus 772 ~~~------~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 845 (1262)
... ..++.++|++|++.+++.+|+.||+.+...... ..+.+..++.+.++++.+|+.+..++.+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 321 134679999999999999999999987643211 1223334456788999999988777654 479
Q ss_pred CHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 846 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 846 SgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|+++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~ 215 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAY 215 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEE
Confidence 999999999999999999999999999999999999999999998765 899999999974 4666777753
No 167
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-34 Score=308.92 Aligned_cols=196 Identities=33% Similarity=0.474 Sum_probs=163.4
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.+. .+.+++|+||++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCcccc
Confidence 4677777663 246999999999999 999999999999999999999876 458999999987542
Q ss_pred --ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000838 774 --ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRK 851 (1262)
Q Consensus 774 --~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 851 (1262)
...++.++|++|++.+++.+|+.||+.+....+. .+.++.++.++++++.+++.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHH
Confidence 2345679999999999999999999988655432 222333456888999999987776653 479999999
Q ss_pred HHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 852 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 852 rl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|++|||||+.+|++++|||||+|||+.++..+.+.|+++++ +.|||++||++. .+.+..|+.
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i 199 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQV 199 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEE
Confidence 99999999999999999999999999999999999999876 599999999975 345566764
No 168
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-34 Score=313.32 Aligned_cols=189 Identities=28% Similarity=0.373 Sum_probs=157.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC--cccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF--VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+....++..
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 104 (220)
T cd03265 28 IFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYGVP 104 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999988 99999999876432 22357999999998999999999999865432210
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
..+..++++++++.+||++..++ .+..||||||||++||+|
T Consensus 105 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qr~~la~a 145 (220)
T cd03265 105 ----------------------------------GAERRERIDELLDFVGLLEAADR-----LVKTYSGGMRRRLEIARS 145 (220)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCCHHHhhC-----ChhhCCHHHHHHHHHHHH
Confidence 00112346778999999877664 456799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcch
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPREL 232 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~ 232 (1262)
++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++...||++++|++|+++..|++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 218 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEE-FGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEE 218 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHH
Confidence 99999999999999999999999999999987543 24567779999999999999999999999999988664
No 169
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-34 Score=311.71 Aligned_cols=185 Identities=25% Similarity=0.376 Sum_probs=153.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~- 103 (213)
T cd03259 28 FLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRGVP- 103 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHHHHHHhHHHHcCCC-
Confidence 47999999999999999999999988 999999999875432 2457999999988888999999998865322100
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..+.+++++++++.+||++..+. .+..||||||||++|||||
T Consensus 104 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrl~la~al 145 (213)
T cd03259 104 ---------------------------------KAEIRARVRELLELVGLEGLLNR-----YPHELSGGQQQRVALARAL 145 (213)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCChhhhhc-----ChhhCCHHHHHHHHHHHHH
Confidence 00112345678999999877664 4567999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+.||++++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999987543 2456777899999999999999999999998765
No 170
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=333.49 Aligned_cols=191 Identities=21% Similarity=0.332 Sum_probs=161.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-------cceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-------QRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.+++.+||+||+.++..
T Consensus 56 i~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~ 132 (400)
T PRK10070 56 IFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGME 132 (400)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999998 9999999998764321 2479999999999999999999999765
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.++.. ..+.+++++++++.+||.+..+ +.++.|||||||||
T Consensus 133 ~~~~~----------------------------------~~~~~~~~~e~L~~~gL~~~~~-----~~~~~LSgGq~QRv 173 (400)
T PRK10070 133 LAGIN----------------------------------AEERREKALDALRQVGLENYAH-----SYPDELSGGMRQRV 173 (400)
T ss_pred hcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhh-----cCcccCCHHHHHHH
Confidence 43210 0011234677899999987766 45668999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.++||+|++|++|+++..|+++++
T Consensus 174 ~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~-~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l 252 (400)
T PRK10070 174 GLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAK-HQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEI 252 (400)
T ss_pred HHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-CCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999987543 345677789999999999999999999999999998876
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 253 ~ 253 (400)
T PRK10070 253 L 253 (400)
T ss_pred H
Confidence 4
No 171
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=9.5e-34 Score=312.15 Aligned_cols=206 Identities=25% Similarity=0.282 Sum_probs=161.6
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+... .....+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4578888776310 001369999999999999999999999999999999999876 45899999998764
Q ss_pred c------ccccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000838 773 H------ETFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVN 843 (1262)
Q Consensus 773 ~------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~ 843 (1262)
. ..+++.++|++|++ .+.+.+|++||+.+........ ...+..+..++++++.+++. +..+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 2 23456899999998 4667899999998765433211 11111122235788999985 455554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|+++
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~ 217 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVA 217 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEE
Confidence 79999999999999999999999999999999999999999999999876 899999999975 4555677653
No 172
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-34 Score=323.10 Aligned_cols=191 Identities=24% Similarity=0.378 Sum_probs=158.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-----cccceEEeeccccC-CCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDN-HIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+|||+|++. .+...||+||+.|+...
T Consensus 35 ~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 111 (287)
T PRK13637 35 FVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPIN 111 (287)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHH
Confidence 47999999999999999999999998 99999999988642 22467999999863 34467999999986543
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc--ccccccccCCcccccccccchh
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD--NCADILVGDEMIRGISGGQKKR 152 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~--~~~~t~vg~~~~~~LSGGqkqR 152 (1262)
.+. ..++.+++++++++.+||+ +..| +.++.||||||||
T Consensus 112 ~~~----------------------------------~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~~~LSgGq~qr 152 (287)
T PRK13637 112 LGL----------------------------------SEEEIENRVKRAMNIVGLDYEDYKD-----KSPFELSGGQKRR 152 (287)
T ss_pred CCC----------------------------------CHHHHHHHHHHHHHHcCCCchhhcc-----CCcccCCHHHHHH
Confidence 211 0111234567889999997 4455 5567899999999
Q ss_pred hHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcch
Q 000838 153 VTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPREL 232 (1262)
Q Consensus 153 vsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~ 232 (1262)
++|||||+.+|++++|||||+|||+.++.++.+.|+++++. .+++|++++|+.+++..+||||++|++|++++.|++++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999987543 35667779999999999999999999999999999887
Q ss_pred HH
Q 000838 233 VL 234 (1262)
Q Consensus 233 ~~ 234 (1262)
+.
T Consensus 232 ~~ 233 (287)
T PRK13637 232 VF 233 (287)
T ss_pred HH
Confidence 64
No 173
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=318.65 Aligned_cols=201 Identities=26% Similarity=0.320 Sum_probs=167.1
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++. .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4678899887631 2359999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 772 KH---ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
.. ...++.+||++|++. .++..||.||+.|..... ..+....+++++++++.+||.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 42 234567999999963 445689999998864322 2333444556889999999988777664 47999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. .+.+.+|++
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i 208 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQV 208 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEE
Confidence 9999999999999999999999999999999999999999999877999999999975 455678885
No 174
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=314.04 Aligned_cols=201 Identities=27% Similarity=0.341 Sum_probs=167.0
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56778887663 2469999999999999999999999999999999999876 45899999998753
Q ss_pred c----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 773 H----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 773 ~----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
. ...++.++|++|++.+++.+|+.||+.+....+. ..+.++.+..++++++.+++.+..+.. ++.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 2 1234679999999999998999999987643321 122334456688999999998766654 3579999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||++|||||+.+|++|+|||||+|||+.++..+.+.+++++++|+|||++||++. ++.+..|+++
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~ 208 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAY 208 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEE
Confidence 999999999999999999999999999999999999999998877999999999974 5667778753
No 175
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=314.35 Aligned_cols=193 Identities=22% Similarity=0.296 Sum_probs=163.8
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 11 ~~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~ 75 (257)
T PRK11247 11 TPLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAP 75 (257)
T ss_pred CcEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEE
Confidence 3588999998773 2469999999999999999999999999999999999876 458999999876
Q ss_pred CCcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 771 KKHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 771 ~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
.. ..++.++|++|++.+++.+||+||+.+... . ..++++.++++.+|+.+..+..+ ..||||||
T Consensus 76 ~~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqk 139 (257)
T PRK11247 76 LA--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQK 139 (257)
T ss_pred HH--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHH
Confidence 43 345679999999999888999999987421 0 12345788999999987766653 57999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||++. .+.+.+|++
T Consensus 140 qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i 204 (257)
T PRK11247 140 QRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRV 204 (257)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEE
Confidence 999999999999999999999999999999999999999865 4899999999975 455677875
No 176
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.1e-33 Score=310.41 Aligned_cols=198 Identities=26% Similarity=0.369 Sum_probs=163.9
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 45678877663 2469999999999999999999999999999999999876 45899999998753
Q ss_pred c--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 773 H--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 773 ~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
. ....+.++|++|++.+++.+|+.||+.+....+ ....+...+.++++++.+|+.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 2 122357899999998888999999998765432 1233334456888999999987776654 47999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ +|+|+|++||++.. + +..|+.
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i 202 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRL 202 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEE
Confidence 999999999999999999999999999999999999999975 58999999999863 3 346764
No 177
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.5e-33 Score=302.79 Aligned_cols=185 Identities=25% Similarity=0.319 Sum_probs=156.7
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEccc
Confidence 4567776652 3569999999999999999999999999999999999876 458999999987532
Q ss_pred --ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000838 774 --ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRK 851 (1262)
Q Consensus 774 --~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 851 (1262)
..+++.++|++|++.+++.+|+.||+.+....+. . + ++.++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHH
Confidence 2345678999999888888999999987643321 1 1 234778999999988777654 479999999
Q ss_pred HHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000838 852 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 905 (1262)
Q Consensus 852 rl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 905 (1262)
|++||||++.+|++++|||||+|||+.++..+.+.|++++++|.|+|++||++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~ 188 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDL 188 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc
Confidence 999999999999999999999999999999999999998777999999999974
No 178
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-34 Score=296.01 Aligned_cols=193 Identities=28% Similarity=0.371 Sum_probs=166.7
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEecCCCCCCC
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHE----TFARISGYCEQNDIHSP 791 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~~ 791 (1262)
+..++++|||+++++||+++|+||||||||||+|+|+|..+ +.+|+|.++|.+++.. ..+.-++--+|...+++
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 46789999999999999999999999999999999999887 4589999999987532 23455778899999999
Q ss_pred CCCHHHHHHHHHHhhc--------CC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000838 792 FVTVHESLAFSAWLRL--------AP-EVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVAN 862 (1262)
Q Consensus 792 ~lTv~e~l~~~~~~~~--------~~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~ 862 (1262)
.|||.||+..+...+. +. ....++..+++.++|+.+||.+.+|...| +||+|||||+.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 9999999998754331 11 11344556778899999999999999865 6999999999999999999
Q ss_pred CCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 863 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 863 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|++|+||||.+||.+....++.+.|+++.++ |.||+++-||.. -++...|++.
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~ 221 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIV 221 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEE
Confidence 9999999999999999999999999999875 799999999987 4788888853
No 179
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=320.38 Aligned_cols=204 Identities=25% Similarity=0.297 Sum_probs=166.8
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++... ...+.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67889998874211 012459999999999999999999999999999999999876 45899999998763
Q ss_pred c-------ccccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000838 773 H-------ETFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGV 842 (1262)
Q Consensus 773 ~-------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 842 (1262)
. ..+++.+||++|++ .++ ..||.||+.|+.... ..+.++.+++++++++.+||. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLF-EETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----P 143 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----c
Confidence 1 23456799999986 344 479999999875432 233444456689999999996 555654 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|+++
T Consensus 144 ~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~ 217 (290)
T PRK13634 144 FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIV 217 (290)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 579999999999999999999999999999999999999999999999765 899999999976 5677888854
No 180
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=320.80 Aligned_cols=205 Identities=24% Similarity=0.308 Sum_probs=166.5
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++... .....+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 67889998874210 0123599999999999999999999999999999999998763 5799999986531
Q ss_pred ---------------------------cccccceEEEecCCC-CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q 000838 773 ---------------------------HETFARISGYCEQND-IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIM 824 (1262)
Q Consensus 773 ---------------------------~~~~~~~~~~v~q~~-~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l 824 (1262)
...+++.+||++|++ ..+...||+||+.|..... ..+.++.++++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123456799999985 2344579999999875432 234455566789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000838 825 ELVELN-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 903 (1262)
Q Consensus 825 ~~l~l~-~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 903 (1262)
+.+||. +..++. +..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++|||
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566665 45799999999999999999999999999999999999999999999998779999999999
Q ss_pred CCHHHHHHhhhhc
Q 000838 904 PSIDIFESFDEAI 916 (1262)
Q Consensus 904 ~~~~~~~~fd~~~ 916 (1262)
+. .+.+..|+++
T Consensus 225 ~~-~~~~~adrv~ 236 (305)
T PRK13651 225 LD-NVLEWTKRTI 236 (305)
T ss_pred HH-HHHHhCCEEE
Confidence 75 4667788753
No 181
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-34 Score=338.49 Aligned_cols=204 Identities=27% Similarity=0.415 Sum_probs=169.4
Q ss_pred CcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc
Q 000838 690 PHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGY 769 (1262)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 769 (1262)
...++|+|++++|+.. ++..+|+|+||+++|||.+||+||||+||||+.++|..... |.+|+|++||.
T Consensus 463 ~G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~ 530 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGV 530 (716)
T ss_pred cceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCe
Confidence 4689999999999864 34679999999999999999999999999999999998776 56899999999
Q ss_pred cCC---cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH--H-HcCCcccccccccCCCCC
Q 000838 770 PKK---HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIM--E-LVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 770 ~~~---~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l--~-~l~l~~~~~~~~~~~~~~ 843 (1262)
|++ +..+++.+|+|.|+|.++. -|++||+.|+.. +.+.++....++..- + ..++.+-.|+.+|..+ .
T Consensus 531 ~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG-~ 603 (716)
T KOG0058|consen 531 PISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKG-S 603 (716)
T ss_pred ehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHHhCccccccccCCcc-c
Confidence 874 4567899999999999986 699999999753 334443322221110 0 1356677899999754 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+||||||||++|||||++||+||||||+||.||.++...+++.|.++.+ ++|||++.|..+ ..+.-|++
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~I 672 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQI 672 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEE
Confidence 7999999999999999999999999999999999999999999998764 699999999875 66777764
No 182
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-33 Score=304.58 Aligned_cols=186 Identities=31% Similarity=0.416 Sum_probs=157.5
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|++..+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 56788887663 2469999999999999999999999999999999999876 45899999997653
Q ss_pred cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000838 773 HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKR 852 (1262)
Q Consensus 773 ~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr 852 (1262)
....++.++|++|++.+++.+|+.||+.+....+. .. ++.++++++.+|+.+..+..+ +.||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22255678999999888888999999987543321 11 123788999999987666553 4799999999
Q ss_pred HHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000838 853 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 905 (1262)
Q Consensus 853 l~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 905 (1262)
++||||++.+|++++|||||+|||+.++..+.+.|++++++|+|||++||++.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~ 188 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL 188 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 99999999999999999999999999999999999998777999999999975
No 183
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=291.42 Aligned_cols=198 Identities=27% Similarity=0.390 Sum_probs=163.4
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|++..| ++.++|+|||+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+++
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecC
Confidence 5677887665 35689999999999999999999999999999999999876 34899999999875
Q ss_pred c----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCH
Q 000838 773 H----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELV-ELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 773 ~----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~l~~~~~~~~~~~~~~~lSg 847 (1262)
. ...++-++||||....||.|||+|||..++..+.. ++..+...+++.+.+ .|.+.+++..| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 3 34567799999999999999999999987654422 111122266777776 36666777655 6999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||.++|||||+.+|++|+|||||.||-|.-.++|.+.|++++++ |.||+++-++.. ...+.-|+.
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~ 207 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRG 207 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEE
Confidence 9999999999999999999999999999999999999999999976 778988888654 355566664
No 184
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.6e-33 Score=313.69 Aligned_cols=202 Identities=22% Similarity=0.249 Sum_probs=167.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 477899988763 3469999999999999999999999999999999999876 4589999999765
Q ss_pred Cc----------------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccc-c
Q 000838 772 KH----------------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLR-Q 834 (1262)
Q Consensus 772 ~~----------------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~-~ 834 (1262)
.. ..+++.++|++|++.+++.+|++||+.+...... .......++++.++++.+|+.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 1335679999999999999999999987542111 123344556688999999997653 4
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000838 835 SLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 914 (1262)
Q Consensus 835 ~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 914 (1262)
.. +..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 43 4579999999999999999999999999999999999999999999999877999999999975 45556777
Q ss_pred hc
Q 000838 915 AI 916 (1262)
Q Consensus 915 ~~ 916 (1262)
++
T Consensus 222 i~ 223 (257)
T PRK10619 222 VI 223 (257)
T ss_pred EE
Confidence 53
No 185
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.3e-33 Score=322.00 Aligned_cols=215 Identities=21% Similarity=0.220 Sum_probs=170.6
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++............+...+++|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEEC
Confidence 57889999887532100000000123579999999999999999999999999999999999876 3589999999876
Q ss_pred Ccc------cccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000838 772 KHE------TFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGV 842 (1262)
Q Consensus 772 ~~~------~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 842 (1262)
... .+++.++||+|++ .++|.+|+.|++.+...... ...+.++.+++++++++.++|. +..++. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 421 2456799999997 57889999999988654332 1234455666788999999995 344554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
.+||||||||++|||||+.+|++|++||||+|||+.++.++++.|+++.++ |.|+|++|||+. .+.+..|++
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri 232 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRV 232 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEE
Confidence 579999999999999999999999999999999999999999999999765 899999999975 455567774
No 186
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.1e-34 Score=318.67 Aligned_cols=191 Identities=23% Similarity=0.340 Sum_probs=159.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-------ccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-------PQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++..
T Consensus 52 ~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 128 (269)
T cd03294 52 IFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 128 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999988 999999998875422 13469999999989989999999998654
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
..+.. ..+..++++++++.+||.+..++. ++.||||||||+
T Consensus 129 ~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv 169 (269)
T cd03294 129 VQGVP----------------------------------RAEREERAAEALELVGLEGWEHKY-----PDELSGGMQQRV 169 (269)
T ss_pred hcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhhCC-----cccCCHHHHHHH
Confidence 32110 001123466789999998877644 457999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|+++||||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 170 ~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 248 (269)
T cd03294 170 GLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEI 248 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999987543 345677789999999999999999999999999988766
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 249 ~ 249 (269)
T cd03294 249 L 249 (269)
T ss_pred H
Confidence 4
No 187
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.5e-33 Score=312.09 Aligned_cols=201 Identities=23% Similarity=0.287 Sum_probs=164.5
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCc
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISGY 769 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g~ 769 (1262)
+.++|+++.+. ++.+++|+|+++++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 46788887763 245999999999999999999999999999999999987632 12899999998
Q ss_pred cCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000838 770 PKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN----PLRQSLVGLP 840 (1262)
Q Consensus 770 ~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~~ 840 (1262)
+... ...++.++|++|++.+++ .|+.||+.+....+. ..+..+.++.++++++.+|+. +..++.
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 234567999999998888 999999988654331 122334455688899999997 445544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+..|+++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~ 214 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTA 214 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999876 489999999975 4666778753
No 188
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-34 Score=310.02 Aligned_cols=186 Identities=26% Similarity=0.366 Sum_probs=155.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.. .++.++|++|++.+++.+|++||+.++...++..
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~-- 104 (220)
T cd03293 32 FVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLDNVALGLELQGVP-- 104 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHHHHHHHHHHHcCCC--
Confidence 47999999999999999999999988 9999999988753 3457999999988888899999999865432210
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
..+..+.++++++.+||.+..+. .+..||||||||++|||||+
T Consensus 105 --------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrl~la~al~ 147 (220)
T cd03293 105 --------------------------------KAEARERAEELLELVGLSGFENA-----YPHQLSGGMRQRVALARALA 147 (220)
T ss_pred --------------------------------HHHHHHHHHHHHHHcCChhhhhC-----CcccCCHHHHHHHHHHHHHH
Confidence 00112346778999999876664 44679999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEec--CCeEEEecCcc
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLS--DGQIVYQGPRE 231 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~--~G~i~~~G~~~ 231 (1262)
.+|++++|||||+|||+.++..+++.|+++.+. .+++|++++|+.+++.+.||++++|+ +|++++.++.+
T Consensus 148 ~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 148 VDPDVLLLDEPFSALDALTREQLQEELLDIWRE-TGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred cCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 999999999999999999999999999986443 34567778999999999999999999 79999887754
No 189
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.8e-33 Score=304.25 Aligned_cols=196 Identities=24% Similarity=0.283 Sum_probs=164.5
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|++..+. ++.+++++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 578899987653 2469999999999999999999999999999999999876 4589999999876
Q ss_pred CcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000838 772 KHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRK 851 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 851 (1262)
.....++.++|++|++.+++.+|+.||+.+....+. .. .++.++++++.+++.+..++.+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 533344568999999988888999999988654321 11 2234678899999987777654 479999999
Q ss_pred HHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000838 852 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 914 (1262)
Q Consensus 852 rl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 914 (1262)
|++|||+++.+|++++|||||+|||+.++..+.+.|+++.++|+|+|++||++. ++.+..|+
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~ 206 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTR 206 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcce
Confidence 999999999999999999999999999999999999998888999999999975 45555555
No 190
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=9.2e-34 Score=324.07 Aligned_cols=191 Identities=26% Similarity=0.376 Sum_probs=159.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc--ccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV--PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~--~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+.....+..
T Consensus 32 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 108 (303)
T TIGR01288 32 CFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFGMS 108 (303)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999988 999999998874321 2467999999998889999999998754322110
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
..+.+.+++++++.++|++..++. +++||||||||++||||
T Consensus 109 ----------------------------------~~~~~~~~~~ll~~~~l~~~~~~~-----~~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 109 ----------------------------------TREIEAVIPSLLEFARLESKADVR-----VALLSGGMKRRLTLARA 149 (303)
T ss_pred ----------------------------------HHHHHHHHHHHHHHCCChhHhcCc-----hhhCCHHHHHHHHHHHH
Confidence 001122456788999998877754 45799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|+.+|++++|||||+|||+.++..+++.|+++++ . +++|++++|+.+++.++||++++|++|++++.|+++++..
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999998754 3 4567779999999999999999999999999999888753
No 191
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=8.9e-34 Score=313.88 Aligned_cols=199 Identities=23% Similarity=0.336 Sum_probs=159.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc----cceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP----QRTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.++....+
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~ 104 (236)
T cd03219 28 IHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQART 104 (236)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhcc
Confidence 47999999999999999999999988 9999999998764321 3469999999999999999999998754321
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
...... . . . .....+..+.++++++.+||++..+ +.++.|||||||||+||
T Consensus 105 ~~~~~~----~-----~----~-----------~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgG~~qrv~la 155 (236)
T cd03219 105 GSGLLL----A-----R----A-----------RREEREARERAEELLERVGLADLAD-----RPAGELSYGQQRRLEIA 155 (236)
T ss_pred cccccc----c-----c----c-----------cccHHHHHHHHHHHHHHcCccchhh-----CChhhCCHHHHHHHHHH
Confidence 000000 0 0 0 0000112335678899999987666 44567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
|||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 999999999999999999999999999999998754 3 45677789999999999999999999999999988765
No 192
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.2e-34 Score=311.15 Aligned_cols=180 Identities=24% Similarity=0.372 Sum_probs=150.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~ 107 (216)
T TIGR00960 31 MVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRI 107 (216)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHh
Confidence 47999999999999999999999988 999999998875321 245799999999899999999999987543
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
++.. .++.+++++++++.+||++..+. .+.+|||||||||+
T Consensus 108 ~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrv~ 148 (216)
T TIGR00960 108 IGVP----------------------------------PRDANERVSAALEKVGLEGKAHA-----LPMQLSGGEQQRVA 148 (216)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHHHHHH
Confidence 2110 00112346778999999877664 45679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeE
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQI 224 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i 224 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++..+||++++|++|++
T Consensus 149 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 149 IARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999998643 3 45677789999999999999999999974
No 193
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-34 Score=313.94 Aligned_cols=194 Identities=26% Similarity=0.376 Sum_probs=158.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-cceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.++....+...
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~ 106 (239)
T cd03296 30 LVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSE 106 (239)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccc
Confidence 47999999999999999999999988 9999999988754322 3579999999988889999999998654321000
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
.. ...+..+.++++++.+||.+..+ +.+..|||||||||+|||||
T Consensus 107 ~~------------------------------~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrl~la~al 151 (239)
T cd03296 107 RP------------------------------PEAEIRAKVHELLKLVQLDWLAD-----RYPAQLSGGQRQRVALARAL 151 (239)
T ss_pred cC------------------------------CHHHHHHHHHHHHHHcCChhhhh-----cChhhCCHHHHHHHHHHHHH
Confidence 00 00011234567899999987666 34567999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++...||++++|++|++++.|+++++
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 224 (239)
T cd03296 152 AVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDE-LHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEV 224 (239)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHH
Confidence 9999999999999999999999999999987543 245677789999999999999999999999999988765
No 194
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3e-33 Score=300.85 Aligned_cols=185 Identities=24% Similarity=0.334 Sum_probs=157.3
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~ 66 (200)
T PRK13540 2 LDVIELDFDYH-------------DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIK 66 (200)
T ss_pred EEEEEEEEEeC-------------CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccc
Confidence 46788887763 2469999999999999999999999999999999999876 45899999998764
Q ss_pred c--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 773 H--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 773 ~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
. ..+++.++|++|+..+++.+||.||+.+.... .. . +..++++++.+++.+..+..+ ..||+|||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~--~~----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 133 (200)
T PRK13540 67 KDLCTYQKQLCFVGHRSGINPYLTLRENCLYDIHF--SP----G--AVGITELCRLFSLEHLIDYPC-----GLLSSGQK 133 (200)
T ss_pred cCHHHHHhheEEeccccccCcCCCHHHHHHHHHhc--Cc----c--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHH
Confidence 2 23467799999998888899999999876421 11 1 234788999999977666543 47999999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 905 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 905 (1262)
||++||||++.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++.
T Consensus 134 ~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 188 (200)
T PRK13540 134 RQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDL 188 (200)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch
Confidence 9999999999999999999999999999999999999998777999999999975
No 195
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=9.9e-34 Score=327.60 Aligned_cols=191 Identities=24% Similarity=0.307 Sum_probs=160.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCc----cCCCCc-------ccceEEeeccccCCCCCCCHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGH----NMGEFV-------PQRTAAYISQHDNHIGEMTVRETLA 69 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~----~~~~~~-------~~~~~~yv~Q~~~~~~~lTv~e~l~ 69 (1262)
+++|+||||||||||+++|+|+++|+ +|+|+++|. ++.... .++.++||+|++.+++.+||+||+.
T Consensus 52 i~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~Tv~eNi~ 128 (382)
T TIGR03415 52 ICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVA 128 (382)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCcHHHHHH
Confidence 47999999999999999999999998 999999996 333221 1247999999999999999999999
Q ss_pred HHHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCccccccccc
Q 000838 70 FSARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQ 149 (1262)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1262)
++....+.. ..+.+.+++++++.+||++..| .++..|||||
T Consensus 129 ~~~~~~g~~----------------------------------~~~~~~~a~e~le~vgL~~~~~-----~~~~~LSgGq 169 (382)
T TIGR03415 129 FGLEMQGMP----------------------------------EAERRKRVDEQLELVGLAQWAD-----KKPGELSGGM 169 (382)
T ss_pred HHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhc-----CChhhCCHHH
Confidence 986543210 0112345678899999988776 4556799999
Q ss_pred chhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecC
Q 000838 150 KKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 229 (1262)
Q Consensus 150 kqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~ 229 (1262)
||||+|||||+.+|+|+||||||+|||+.++.++.+.|+++.+. .+++|++++|+.+++.+++|||++|++|+++..|+
T Consensus 170 ~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~-~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~ 248 (382)
T TIGR03415 170 QQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAK-LNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGT 248 (382)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999999999999987543 34567779999999999999999999999999999
Q ss_pred cchHH
Q 000838 230 RELVL 234 (1262)
Q Consensus 230 ~~~~~ 234 (1262)
++++.
T Consensus 249 ~~ei~ 253 (382)
T TIGR03415 249 PEEIV 253 (382)
T ss_pred HHHHh
Confidence 88764
No 196
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.8e-33 Score=307.02 Aligned_cols=203 Identities=25% Similarity=0.347 Sum_probs=166.1
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++... ..+.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~~---------~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQGE---------HELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCCC---------cceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 578899988764210 11359999999999999999999999999999999999876 4589999999875
Q ss_pred Ccc-------cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000838 772 KHE-------TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNG 844 (1262)
Q Consensus 772 ~~~-------~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 844 (1262)
... ..++.++|++|++.+++.+|+.||+.+....+. ....+.+++++++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 321 113579999999999999999999987653321 223344566889999999987766653 47
Q ss_pred CCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 845 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 845 lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. .+ +..|+.
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i 216 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRR 216 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEE
Confidence 9999999999999999999999999999999999999999999998765 899999999986 33 446664
No 197
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-33 Score=320.92 Aligned_cols=206 Identities=25% Similarity=0.326 Sum_probs=167.3
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.++... ...+.+|+|||+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 20 ~~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~ 89 (320)
T PRK13631 20 IILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIY 89 (320)
T ss_pred ceEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEE
Confidence 3588999999884210 012359999999999999999999999999999999999876 458999999976
Q ss_pred CCc-------------------ccccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCC
Q 000838 771 KKH-------------------ETFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVEL 829 (1262)
Q Consensus 771 ~~~-------------------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l 829 (1262)
... ...++.+|||+|++ .+++ .|+.||+.|+.... ..+.++..++++++++.+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL 165 (320)
T PRK13631 90 IGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGL 165 (320)
T ss_pred cccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCC
Confidence 532 23467899999986 3554 59999998864322 22344455668899999999
Q ss_pred c-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHH
Q 000838 830 N-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDI 908 (1262)
Q Consensus 830 ~-~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~ 908 (1262)
. +..++. +.+||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++
T Consensus 166 ~~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~ 239 (320)
T PRK13631 166 DDSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HV 239 (320)
T ss_pred ChhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HH
Confidence 6 455554 4579999999999999999999999999999999999999999999998877999999999975 45
Q ss_pred HHHhhhhc
Q 000838 909 FESFDEAI 916 (1262)
Q Consensus 909 ~~~fd~~~ 916 (1262)
.+..|+.+
T Consensus 240 ~~~adri~ 247 (320)
T PRK13631 240 LEVADEVI 247 (320)
T ss_pred HHhCCEEE
Confidence 67788753
No 198
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=310.91 Aligned_cols=199 Identities=24% Similarity=0.316 Sum_probs=165.2
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 56888887763 2469999999999999999999999999999999999876 45899999998642
Q ss_pred ---------cccccceEEEecCCCCCCCCCCHHHHHHHHH-HhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000838 773 ---------HETFARISGYCEQNDIHSPFVTVHESLAFSA-WLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGV 842 (1262)
Q Consensus 773 ---------~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 842 (1262)
....++.++|++|++.+++.+|+.||+.+.. ... .....+..+.+.++++.+|+.+..++.+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 1123567999999999999999999997532 221 1223334456888999999987777653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++|+|+|+++|++. ++.+..|+.
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i 211 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRV 211 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEE
Confidence 479999999999999999999999999999999999999999999999777999999999975 455567774
No 199
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=4.3e-33 Score=307.21 Aligned_cols=156 Identities=26% Similarity=0.327 Sum_probs=125.3
Q ss_pred EEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEecCCCCCCCCCCHHHHHHHHHH
Q 000838 725 SGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHETFARISGYCEQNDIHSPFVTVHESLAFSAW 804 (1262)
Q Consensus 725 s~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~ 804 (1262)
.+++..||+++++||||-||||+.++|+|-.++ .+|+ .. .-.++|=||--.--...||++.+.-...
T Consensus 361 ~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~~~~~ 427 (591)
T COG1245 361 EGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLRSAIR 427 (591)
T ss_pred CCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Cc-------cceEeecceeecCCCCCcHHHHHHHhhh
Confidence 467788999999999999999999999998764 3554 11 1246777776555567899998764432
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHH
Q 000838 805 LRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 884 (1262)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~ 884 (1262)
-+... .-...++.+-|+|++..++.+ .+|||||.|||+||.+|.+++++.+||||++.||.+.+..+.
T Consensus 428 ~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~va 495 (591)
T COG1245 428 SAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVA 495 (591)
T ss_pred hhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHH
Confidence 21111 112457888899999888875 479999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC-CCEEEEEecCCC
Q 000838 885 RTVRNTVDT-GRTVVCTIHQPS 905 (1262)
Q Consensus 885 ~~l~~~~~~-g~tvi~~~H~~~ 905 (1262)
+.||+..++ ++|.+++-||.-
T Consensus 496 kvIRR~~e~~~kta~vVdHDi~ 517 (591)
T COG1245 496 KVIRRFIENNEKTALVVDHDIY 517 (591)
T ss_pred HHHHHHHhhcCceEEEEeccee
Confidence 999999865 899999999975
No 200
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2e-33 Score=302.18 Aligned_cols=191 Identities=28% Similarity=0.341 Sum_probs=159.0
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4677776653 2468999999999999999999999999999999999876 458999999987532
Q ss_pred --ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000838 774 --ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRK 851 (1262)
Q Consensus 774 --~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 851 (1262)
..+++.++|++|++.+++.+|++||+.+.... . .+++++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHH
Confidence 23456799999999888899999999875311 1 2334788999999987766653 479999999
Q ss_pred HHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000838 852 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 914 (1262)
Q Consensus 852 rl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 914 (1262)
|++|||||+.+|++++|||||+|||+.++..+.+.|+++.++|+|+|++||++. ++...+|+
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~ 194 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGAR 194 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccce
Confidence 999999999999999999999999999999999999998777999999999875 33334443
No 201
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-33 Score=317.75 Aligned_cols=204 Identities=25% Similarity=0.319 Sum_probs=166.6
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++... ...+.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 56889998874210 011359999999999999999999999999999999999876 45899999998753
Q ss_pred c-------ccccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000838 773 H-------ETFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGV 842 (1262)
Q Consensus 773 ~-------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 842 (1262)
. ...++.+||++|++ .+++ .||.|++.|..... ..+.++.++++.++++.++|. +..++. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 23467899999986 4444 69999999875432 233455566788999999996 455554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|+++
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~ 215 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVY 215 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEE
Confidence 579999999999999999999999999999999999999999999999877999999999974 5667788854
No 202
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-34 Score=312.80 Aligned_cols=190 Identities=25% Similarity=0.356 Sum_probs=158.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++...
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~ 109 (233)
T cd03258 33 IFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEI 109 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999998 999999999875432 145799999999999899999999886543
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
++.. ..+..+.++++++.+||++..+ +.+..||||||||++
T Consensus 110 ~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv~ 150 (233)
T cd03258 110 AGVP----------------------------------KAEIEERVLELLELVGLEDKAD-----AYPAQLSGGQKQRVG 150 (233)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHCCChhhhh-----cChhhCCHHHHHHHH
Confidence 2110 0011234567899999987766 345679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+. ++++|++++|+.+++.++||++++|++|++++.|+.+++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEV 228 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999999986543 345677789999999999999999999999999987765
No 203
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-34 Score=329.87 Aligned_cols=185 Identities=23% Similarity=0.374 Sum_probs=159.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-------cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-------VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|++.+++.+||+||+.|+..
T Consensus 26 ~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 102 (352)
T PRK11144 26 ITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKVRGNLRYGMA 102 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcHHHHHHhhhh
Confidence 47999999999999999999999998 99999999887431 124679999999999999999999998532
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.. .+++++++++.+||++..+ +.++.|||||||||
T Consensus 103 ~~----------------------------------------~~~~~~~~l~~~gl~~~~~-----~~~~~LSgGq~qRv 137 (352)
T PRK11144 103 KS----------------------------------------MVAQFDKIVALLGIEPLLD-----RYPGSLSGGEKQRV 137 (352)
T ss_pred hh----------------------------------------hHHHHHHHHHHcCCchhhh-----CCcccCCHHHHHHH
Confidence 00 0123567899999987766 45568999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+.+++..+||++++|++|+++..|+++++
T Consensus 138 alaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i 216 (352)
T PRK11144 138 AIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEV 216 (352)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHH
Confidence 9999999999999999999999999999999999987643 345677799999999999999999999999999999887
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 217 ~ 217 (352)
T PRK11144 217 W 217 (352)
T ss_pred H
Confidence 4
No 204
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-33 Score=306.53 Aligned_cols=215 Identities=23% Similarity=0.317 Sum_probs=175.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC-C-CCceeEEEEECCccCCCCc-------ccceEEeecccc--CCCCCCCHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD-S-SLKVSGRVTYNGHNMGEFV-------PQRTAAYISQHD--NHIGEMTVRETLA 69 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~-~-~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~--~~~~~lTv~e~l~ 69 (1262)
+++|+|+|||||||+.++|+|+++ + ....+|+|.++|.++.... +.+.+++++|++ .+-|.+||.+.+.
T Consensus 33 ~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~ 112 (316)
T COG0444 33 ILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIA 112 (316)
T ss_pred EEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHH
Confidence 479999999999999999999998 4 3346899999999875433 235899999994 6889999999998
Q ss_pred HHHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCccccccccc
Q 000838 70 FSARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQ 149 (1262)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1262)
-..+.+.... ..+|+++++.++|+.+||++-.. +-+.++.+|||||
T Consensus 113 E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~~--~~~~YPhelSGGM 158 (316)
T COG0444 113 EVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPER--RLKSYPHELSGGM 158 (316)
T ss_pred HHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHHH--HHhhCCcccCCcH
Confidence 7665431100 11234566788999999987432 2347899999999
Q ss_pred chhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecC
Q 000838 150 KKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 229 (1262)
Q Consensus 150 kqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~ 229 (1262)
||||.||.||+.+|++||.||||++||...+.+|+++|+++.+ +.+++++.||||...+.++||||+||..|++++.|+
T Consensus 159 rQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g~ 237 (316)
T COG0444 159 RQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIADRVAVMYAGRIVEEGP 237 (316)
T ss_pred HHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeCC
Confidence 9999999999999999999999999999999999999999876 456788889999999999999999999999999999
Q ss_pred cchHHHHHHhCCCCCCCCCChhhHHhhhc
Q 000838 230 RELVLEFFESMGFKCPQRKGVADFLQEVT 258 (1262)
Q Consensus 230 ~~~~~~~~~~~g~~~p~~~~~~~~~~~~~ 258 (1262)
.+++. ..|.+..+...+..+.
T Consensus 238 ~~~i~--------~~P~HPYT~~Ll~s~P 258 (316)
T COG0444 238 VEEIF--------KNPKHPYTRGLLNSLP 258 (316)
T ss_pred HHHHh--------cCCCChHHHHHHHhCc
Confidence 99874 3466655555555443
No 205
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-33 Score=318.11 Aligned_cols=205 Identities=22% Similarity=0.340 Sum_probs=166.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++... ...+.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 367889998874210 012459999999999999999999999999999999999876 4589999999876
Q ss_pred Cc-------ccccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000838 772 KH-------ETFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPG 841 (1262)
Q Consensus 772 ~~-------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~ 841 (1262)
.. ..+++.+||++|++ .+++ .|+.||+.|..... ..+.++.+++++++++.+||. +..++.
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~----- 142 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS----- 142 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 32 23467899999986 3444 59999999865332 234445556788999999996 556654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhhc
Q 000838 842 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 842 ~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||++. ++.+.+|+++
T Consensus 143 ~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~ 217 (286)
T PRK13646 143 PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVI 217 (286)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999976 4899999999975 4667788753
No 206
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-33 Score=317.39 Aligned_cols=202 Identities=25% Similarity=0.300 Sum_probs=168.4
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 46789999887421 12359999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 772 KH---ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
.. ...++.+||++|++. .++..||.||+.|..... ..+.++.+++++++++.+||.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 42 234567999999973 667789999999865332 2344455567899999999988777664 47999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||++.. + ...|++
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~-~-~~~dri 210 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDE-V-ALSDRV 210 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEE
Confidence 9999999999999999999999999999999999999999999875 9999999999763 4 567874
No 207
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.3e-33 Score=322.19 Aligned_cols=190 Identities=25% Similarity=0.371 Sum_probs=162.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC--cccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF--VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+||++|++.+++.+||.||+.+.+.+++..
T Consensus 30 i~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~~~ 106 (301)
T TIGR03522 30 IVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYGMK 106 (301)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999998 99999999887542 22457999999999999999999999876543210
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
.++..++++++++.+||.+..+. .++.||||||||++||+|
T Consensus 107 ----------------------------------~~~~~~~~~~~l~~~gl~~~~~~-----~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 107 ----------------------------------GQLLKQRVEEMIELVGLRPEQHK-----KIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred ----------------------------------HHHHHHHHHHHHHHCCCchHhcC-----chhhCCHHHHHHHHHHHH
Confidence 01112346778999999988774 455799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|+.+|++++|||||+|||+.++.++++.|+++. ++ ++|++++|+.+++.++||||++|++|++++.|+.+++.+
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--KD-KTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--CC-CEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 999999999999999999999999999999863 23 667889999999999999999999999999999988754
No 208
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=311.56 Aligned_cols=202 Identities=21% Similarity=0.242 Sum_probs=163.4
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEC
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKIS 767 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~ 767 (1262)
..+.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++
T Consensus 6 ~~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 72 (254)
T PRK14273 6 AIIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYE 72 (254)
T ss_pred ceEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEEC
Confidence 3678999988763 235899999999999999999999999999999999986532 247999999
Q ss_pred CccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc----cccccccc
Q 000838 768 GYPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN----PLRQSLVG 838 (1262)
Q Consensus 768 g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~ 838 (1262)
|.++.. ...++.++|++|++.+++ +||+||+.+....+. .......++.++++++.+++. +..++.
T Consensus 73 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 147 (254)
T PRK14273 73 GKNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN-- 147 (254)
T ss_pred CEecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC--
Confidence 987531 234567999999988775 899999988654321 112233455678889988874 233443
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 839 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 839 ~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+++||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||++||++. ++.+..|+.
T Consensus 148 ---~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i 219 (254)
T PRK14273 148 ---ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRT 219 (254)
T ss_pred ---cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEE
Confidence 45799999999999999999999999999999999999999999999996 4799999999985 455667775
No 209
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-33 Score=304.77 Aligned_cols=182 Identities=26% Similarity=0.345 Sum_probs=153.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEecCCCCCCCCCCHHHHHHH
Q 000838 723 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH-ETFARISGYCEQNDIHSPFVTVHESLAF 801 (1262)
Q Consensus 723 ~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~lTv~e~l~~ 801 (1262)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 458999999987642 1234679999999999999999999987
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHH
Q 000838 802 SAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 881 (1262)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~ 881 (1262)
....+. .. .+..+++++++++.+++.+..++.+ ..||||||||++|||||+.+|++++|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 542211 11 1233456889999999987777653 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 882 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 882 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
.+.+.|++++++ |+|||++||++. ++.+.+|+.
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i 199 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRV 199 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEE
Confidence 999999998764 899999999975 455667774
No 210
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-33 Score=317.12 Aligned_cols=206 Identities=25% Similarity=0.301 Sum_probs=166.3
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+.... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 356888888774110 002459999999999999999999999999999999999877 4589999999875
Q ss_pred Cc-------ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000838 772 KH-------ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGV 842 (1262)
Q Consensus 772 ~~-------~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 842 (1262)
.. ...++.++|++|++. .+..+||.||+.+....+ ....++.+++++++++.+||. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP----- 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----
Confidence 32 134567999999963 233589999998765332 223444556688999999997 5666653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|.|||++||++. ++.+..|+++
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~ 216 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVL 216 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEE
Confidence 479999999999999999999999999999999999999999999999777999999999975 4667788753
No 211
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.4e-33 Score=311.52 Aligned_cols=189 Identities=20% Similarity=0.348 Sum_probs=157.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc----ccceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV----PQRTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+....++
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (232)
T cd03218 28 IVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG 104 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC
Confidence 47999999999999999999999998 999999998875432 13469999999999999999999988643221
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. ..+....++++++.+||++..++ .++.||||||||++||
T Consensus 105 ~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~la 145 (232)
T cd03218 105 LS----------------------------------KKEREEKLEELLEEFHITHLRKS-----KASSLSGGERRRVEIA 145 (232)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHHHHHHHH
Confidence 10 00112346778999999876664 4567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
|||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++.+.||++++|++|++++.|+.+++
T Consensus 146 ~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 146 RALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEI 220 (232)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHh
Confidence 999999999999999999999999999999998753 3 45677789999999999999999999999999987765
No 212
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=310.56 Aligned_cols=204 Identities=23% Similarity=0.251 Sum_probs=165.6
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
.+.++|+++.+. ++.+++|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 367888887763 246999999999999999999999999999999999986531 3589999999
Q ss_pred ccCCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCCC
Q 000838 769 YPKKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL----RQSLVGLPG 841 (1262)
Q Consensus 769 ~~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~----~~~~~~~~~ 841 (1262)
.++.. ..+++.++|++|++.+++.+|+.||+.+....+.. .....+.++.++++++.+++.+. .++.
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~----- 143 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP----- 143 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----
Confidence 87532 23456799999999888899999999886543211 11223344568889999998642 3333
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 842 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 842 ~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+.+||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ |+|+|++||++. ++.+.+|+++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~ 216 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVA 216 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEE
Confidence 457999999999999999999999999999999999999999999999864 899999999975 4566778753
No 213
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3.6e-33 Score=311.81 Aligned_cols=200 Identities=25% Similarity=0.304 Sum_probs=165.9
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.+. .+.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 66 (252)
T TIGR03005 2 RFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYH 66 (252)
T ss_pred EEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 4678887763 2469999999999999999999999999999999999876 458999999976531
Q ss_pred ----------------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000838 774 ----------------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLV 837 (1262)
Q Consensus 774 ----------------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~ 837 (1262)
...++.++|++|++.+++..|+.||+.+..... ........++.++++++.+|+.+..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~- 143 (252)
T TIGR03005 67 MPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM- 143 (252)
T ss_pred cccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC-
Confidence 123567999999999999999999998753211 1123344455688999999998776665
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 838 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 838 ~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++....|+.+
T Consensus 144 ----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~ 218 (252)
T TIGR03005 144 ----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVC 218 (252)
T ss_pred ----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEE
Confidence 3579999999999999999999999999999999999999999999998765 899999999975 4566778753
No 214
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=321.03 Aligned_cols=205 Identities=23% Similarity=0.352 Sum_probs=164.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-------cccceEEeecccc-CCCCCCCHHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-------VPQRTAAYISQHD-NHIGEMTVRETLAFSA 72 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~-~~~~~lTv~e~l~f~~ 72 (1262)
+++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++||+|++ ..+...||.||+.|+.
T Consensus 34 ~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~ 110 (288)
T PRK13643 34 YTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLFEETVLKDVAFGP 110 (288)
T ss_pred EEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchhcccchHHHHHHhHH
Confidence 47999999999999999999999998 99999999987421 1246799999985 2333469999999976
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-ccccccccCCcccccccccch
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVGDEMIRGISGGQKK 151 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkq 151 (1262)
...+.. ..+.+.+++++++.+||. +..+ +.++.|||||||
T Consensus 111 ~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~-----~~~~~LSgGqkq 151 (288)
T PRK13643 111 QNFGIP----------------------------------KEKAEKIAAEKLEMVGLADEFWE-----KSPFELSGGQMR 151 (288)
T ss_pred HHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhcc-----CCcccCCHHHHH
Confidence 432210 011233567889999996 4454 456789999999
Q ss_pred hhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 152 RVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 152 RvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
|++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++...||||++|++|+++++|+++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~ 229 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPS 229 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999988753 3 456777999999999999999999999999999998
Q ss_pred hHHH---HHHhCCCCCCCCCC
Q 000838 232 LVLE---FFESMGFKCPQRKG 249 (1262)
Q Consensus 232 ~~~~---~~~~~g~~~p~~~~ 249 (1262)
++.. .++..|+.+|....
T Consensus 230 ~~~~~~~~~~~~~~~~p~~~~ 250 (288)
T PRK13643 230 DVFQEVDFLKAHELGVPKATH 250 (288)
T ss_pred HHHcCHHHHHHcCCCCChHHH
Confidence 8743 34455666554433
No 215
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=100.00 E-value=1.3e-33 Score=324.85 Aligned_cols=188 Identities=26% Similarity=0.329 Sum_probs=159.4
Q ss_pred EeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcchh
Q 000838 4 LLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYD 82 (1262)
Q Consensus 4 i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~ 82 (1262)
|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.|+.+.++..
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~p~---~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~---- 73 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQPD---SGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEENVAFGLKMRKVP---- 73 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHHHHHHHHhhcCCC----
Confidence 68999999999999999999998 999999999875432 2467999999999999999999999976432110
Q ss_pred hhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHhcC
Q 000838 83 MLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMVGP 162 (1262)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~~~ 162 (1262)
..+.+++++++++.+||++..+ +.+..|||||||||+|||||+.+
T Consensus 74 ------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgGq~qRvalaraL~~~ 118 (325)
T TIGR01187 74 ------------------------------RAEIKPRVLEALRLVQLEEFAD-----RKPHQLSGGQQQRVALARALVFK 118 (325)
T ss_pred ------------------------------HHHHHHHHHHHHHHcCCcchhc-----CChhhCCHHHHHHHHHHHHHHhC
Confidence 0011234677899999988766 45668999999999999999999
Q ss_pred CeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 163 ALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 163 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+..++..+||++++|++|+++..|+++++.
T Consensus 119 p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~-~g~tiiivTHd~~e~~~~~d~i~vl~~G~i~~~g~~~~~~ 189 (325)
T TIGR01187 119 PKILLLDEPLSALDKKLRDQMQLELKTIQEQ-LGITFVFVTHDQEEAMTMSDRIAIMRKGKIAQIGTPEEIY 189 (325)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999987543 3456677899999999999999999999999999988764
No 216
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.1e-33 Score=309.64 Aligned_cols=202 Identities=26% Similarity=0.293 Sum_probs=165.0
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++ .+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 56788887663 2469999999999999999999999999999999999876 45899999998753
Q ss_pred cc----cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000838 773 HE----TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLA-----PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 773 ~~----~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~-----~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 843 (1262)
.. ..++.++|++|++.+++.+|+.||+.+....... .....+..+++++++++.+|+.+..+..+ +
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 21 1235699999999999999999999886432100 00112334456889999999987776654 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||++. ++.+.+|+++
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~ 213 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVT 213 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEE
Confidence 7999999999999999999999999999999999999999999999875 789999999975 4666778753
No 217
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-33 Score=306.67 Aligned_cols=183 Identities=28% Similarity=0.427 Sum_probs=153.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc--ccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV--PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~--~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+....++..
T Consensus 27 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 103 (211)
T cd03264 27 MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKGIP 103 (211)
T ss_pred cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhCCC
Confidence 47999999999999999999999988 999999998875432 2467999999998999999999999865432110
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
.++.++.++++++.+||++..++ .+..||||||||++||||
T Consensus 104 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 104 ----------------------------------SKEVKARVDEVLELVNLGDRAKK-----KIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred ----------------------------------HHHHHHHHHHHHHHCCCHHHHhC-----chhhCCHHHHHHHHHHHH
Confidence 00112346778999999877664 445799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
|+.+|++++|||||+|||+.++..+.+.|++.++ + ++|++++|+.+++.+++||+++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998643 3 56778999999999999999999999998765
No 218
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.3e-33 Score=324.01 Aligned_cols=193 Identities=22% Similarity=0.248 Sum_probs=160.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeecccc--CCCCCCCHHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHD--NHIGEMTVRETLAFSA 72 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1262)
+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.... .++.++||+|++ .++|.+||.||+.+..
T Consensus 49 ~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l 125 (331)
T PRK15079 49 TLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPL 125 (331)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999987 999999999886432 235799999997 5888999999999865
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-ccccccccCCcccccccccch
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVGDEMIRGISGGQKK 151 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkq 151 (1262)
.....+. ..++.++++.++++.+||. +..+ +++..|||||||
T Consensus 126 ~~~~~~~--------------------------------~~~~~~~~~~~~l~~vgl~~~~~~-----~~p~~LSgG~~Q 168 (331)
T PRK15079 126 RTYHPKL--------------------------------SRQEVKDRVKAMMLKVGLLPNLIN-----RYPHEFSGGQCQ 168 (331)
T ss_pred HHhccCC--------------------------------CHHHHHHHHHHHHHHcCCChHHhc-----CCcccCCHHHHH
Confidence 4321000 0011234567789999994 4444 567789999999
Q ss_pred hhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 152 RVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 152 RvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
||+|||||+.+|+++++||||+|||+.++.++++.|+++.+. .+.++++++|+...+.++||+|++|++|++++.|+.+
T Consensus 169 Rv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~~ 247 (331)
T PRK15079 169 RIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYD 247 (331)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 999999999999999999999999999999999999987543 3567788999999999999999999999999999988
Q ss_pred hHH
Q 000838 232 LVL 234 (1262)
Q Consensus 232 ~~~ 234 (1262)
++.
T Consensus 248 ~i~ 250 (331)
T PRK15079 248 EVY 250 (331)
T ss_pred HHH
Confidence 764
No 219
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=320.30 Aligned_cols=191 Identities=20% Similarity=0.314 Sum_probs=157.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-------cccceEEeeccccC-CCCCCCHHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-------VPQRTAAYISQHDN-HIGEMTVRETLAFSA 72 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~ 72 (1262)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++... ..++.++||+|++. .+...||+||+.|+.
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~ 111 (290)
T PRK13634 35 YVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGP 111 (290)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHH
Confidence 47999999999999999999999998 99999999987421 12357999999852 333579999999875
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-ccccccccCCcccccccccch
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVGDEMIRGISGGQKK 151 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkq 151 (1262)
...+.. .++..++++++++.+||. +..+ +.++.|||||||
T Consensus 112 ~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~~LSgGq~q 152 (290)
T PRK13634 112 MNFGVS----------------------------------EEDAKQKAREMIELVGLPEELLA-----RSPFELSGGQMR 152 (290)
T ss_pred HHcCCC----------------------------------HHHHHHHHHHHHHHCCCChhhhh-----CCcccCCHHHHH
Confidence 432110 011223567889999997 5555 456689999999
Q ss_pred hhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 152 RVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 152 RvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
||+|||||+.+|+++||||||+|||+.++.++.+.|+++++. .+++|++++|+.+++.+.||||++|++|++++.|+++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999987543 3456777999999999999999999999999999988
Q ss_pred hHH
Q 000838 232 LVL 234 (1262)
Q Consensus 232 ~~~ 234 (1262)
++.
T Consensus 232 ~~~ 234 (290)
T PRK13634 232 EIF 234 (290)
T ss_pred HHh
Confidence 764
No 220
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.6e-33 Score=309.78 Aligned_cols=204 Identities=23% Similarity=0.249 Sum_probs=161.1
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~ 68 (243)
T TIGR01978 2 KIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLE 68 (243)
T ss_pred eEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCC
Confidence 4678877763 246999999999999999999999999999999999984211468999999987532
Q ss_pred ---cc-ccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCC----CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCC
Q 000838 774 ---ET-FARISGYCEQNDIHSPFVTVHESLAFSAWLRLAP----EVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNG 844 (1262)
Q Consensus 774 ---~~-~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~ 844 (1262)
.. .+..++|++|++.+++.+|++|++.+........ ..+..+..+.++++++.+++. +..++.+. .+
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~ 144 (243)
T TIGR01978 69 LEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EG 144 (243)
T ss_pred CCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cC
Confidence 12 2334899999999999999999998764322110 012233345688899999997 34554422 24
Q ss_pred CCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH-hhhh
Q 000838 845 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFES-FDEA 915 (1262)
Q Consensus 845 lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-fd~~ 915 (1262)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... .|++
T Consensus 145 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i 215 (243)
T TIGR01978 145 FSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYV 215 (243)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeE
Confidence 9999999999999999999999999999999999999999999999877899999999975 33344 4764
No 221
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=309.87 Aligned_cols=199 Identities=24% Similarity=0.345 Sum_probs=163.5
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. .+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 477889988763 2469999999999999999999999999999999999876 4589999999875
Q ss_pred Ccc----cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 000838 772 KHE----TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELV-ELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 772 ~~~----~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~l~~~~~~~~~~~~~~~lS 846 (1262)
... ..++.++|++|++.+++.+||.||+.+..... ..+..++.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 421 23567999999999999999999998754211 1122334466777777 466555544 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|+.+
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~ 208 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGY 208 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEE
Confidence 99999999999999999999999999999999999999999999877999999999974 5667778753
No 222
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.5e-33 Score=328.20 Aligned_cols=189 Identities=23% Similarity=0.408 Sum_probs=160.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-------cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-------VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.|+..
T Consensus 25 i~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 101 (354)
T TIGR02142 25 VTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSVRGNLRYGMK 101 (354)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcHHHHHHHHhh
Confidence 47999999999999999999999998 99999999887432 124679999999999999999999998653
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
... ..+.+++++++++.+||++..+ +.+..|||||||||
T Consensus 102 ~~~------------------------------------~~~~~~~~~~~l~~~gL~~~~~-----~~~~~LSgGqkqRv 140 (354)
T TIGR02142 102 RAR------------------------------------PSERRISFERVIELLGIGHLLG-----RLPGRLSGGEKQRV 140 (354)
T ss_pred ccC------------------------------------hhHHHHHHHHHHHHcCChhHhc-----CChhhCCHHHHHHH
Confidence 210 0011234677899999988776 45568999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+.+++..++|++++|++|+++..|+++++
T Consensus 141 alAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 219 (354)
T TIGR02142 141 AIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAE-FGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEV 219 (354)
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 9999999999999999999999999999999999987543 245677789999999999999999999999999998876
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 220 ~ 220 (354)
T TIGR02142 220 W 220 (354)
T ss_pred h
Confidence 4
No 223
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-33 Score=311.86 Aligned_cols=200 Identities=26% Similarity=0.358 Sum_probs=165.3
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56788887763 2469999999999999999999999999999999999876 45899999998653
Q ss_pred c---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000838 773 H---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 773 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGq 849 (1262)
. ..+++.++|++|++.+++.+|++||+.+...... ...+..++.++++++.+|+.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHG---LSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccC---CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 2344678999999888888999999987542211 112233455788999999987777654 4799999
Q ss_pred HHHHHHHHHHh------hCCCCcceeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 850 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 850 rqrl~ia~al~------~~p~illlDEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||++||+||+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||++||++. ++.+..|+++
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~ 212 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIV 212 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEE
Confidence 99999999999 5999999999999999999999999999987 56899999999975 4566778753
No 224
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.7e-33 Score=306.55 Aligned_cols=185 Identities=28% Similarity=0.393 Sum_probs=154.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++..|++||+.++....+..
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~- 103 (213)
T cd03301 28 FVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRKVP- 103 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHHHHHHHHHHhcCCC-
Confidence 47899999999999999999999988 999999999875432 2357999999998888899999998865432110
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
.++.+++++++++.+||.+..+. .++.||||||||++|||||
T Consensus 104 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qr~~laral 145 (213)
T cd03301 104 ---------------------------------KDEIDERVREVAELLQIEHLLDR-----KPKQLSGGQRQRVALGRAI 145 (213)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCHHHHhC-----ChhhCCHHHHHHHHHHHHH
Confidence 00112346778999999877664 4567999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
+.+|++++|||||+|||+.++..+.+.|+++++.. +++|++++|+.+++...||++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999876433 456677899999999999999999999998876
No 225
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-33 Score=306.50 Aligned_cols=183 Identities=24% Similarity=0.366 Sum_probs=153.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. ..++.++|++|++.+++.+|++||+.+....++..
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~-- 101 (210)
T cd03269 28 IFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKGLK-- 101 (210)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcCCC--
Confidence 47999999999999999999999988 9999999988754 23467999999998889999999998865432210
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
..+..+.++++++.+||++..++ .+++||||||||++||+||+
T Consensus 102 --------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~la~al~ 144 (210)
T cd03269 102 --------------------------------KEEARRRIDEWLERLELSEYANK-----RVEELSKGNQQKVQFIAAVI 144 (210)
T ss_pred --------------------------------hHHHHHHHHHHHHHcCChHHHhC-----cHhhCCHHHHHHHHHHHHHh
Confidence 00112346778999999877664 45679999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
.+|++++|||||+|||+.++..+.+.|++..+ + +.+|++++|+.+++.+.||++++|++|++++.|
T Consensus 145 ~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 145 HDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998653 3 456777999999999999999999999998764
No 226
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-33 Score=326.56 Aligned_cols=189 Identities=24% Similarity=0.270 Sum_probs=161.5
Q ss_pred ceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---c----ccceEEEecCCCCC
Q 000838 717 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHE---T----FARISGYCEQNDIH 789 (1262)
Q Consensus 717 ~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~----~~~~~~~v~q~~~~ 789 (1262)
...+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . +++.++|++|+..+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 3468999999999999999999999999999999999876 4589999999876421 1 23579999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCccee
Q 000838 790 SPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 869 (1262)
Q Consensus 790 ~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlD 869 (1262)
++.+||.||+.+....+. ...++.+++++++++.+||.+..++.+ .+||||||||++|||||+.+|++||||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998765432 233445566889999999988777764 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhhc
Q 000838 870 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 870 EPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||+|||+.++..+++.|+++.+ .|+|||++||++. ++.+..|+++
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~ 236 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIA 236 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEE
Confidence 99999999999999999999875 4899999999975 5667788753
No 227
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4.6e-33 Score=305.08 Aligned_cols=194 Identities=24% Similarity=0.326 Sum_probs=162.9
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 4667776652 2469999999999999999999999999999999999876 458999999987543
Q ss_pred ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000838 774 ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRL 853 (1262)
Q Consensus 774 ~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl 853 (1262)
.. .+.++|++|++.+++.+|++||+.+....+. .. ++.+.++++.+|+.+..+..+ ..||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 22 2578999999998888999999987654332 11 234778999999988777653 47999999999
Q ss_pred HHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 854 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 854 ~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+||||++.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+..|+++
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~ 195 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIG 195 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEE
Confidence 9999999999999999999999999999999999999777899999999975 4566778753
No 228
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-33 Score=315.51 Aligned_cols=203 Identities=24% Similarity=0.337 Sum_probs=168.0
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~ 69 (283)
T PRK13636 4 YILKVEELNYNYSD------------GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKP 69 (283)
T ss_pred ceEEEEeEEEEeCC------------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEE
Confidence 35789999988731 2459999999999999999999999999999999999876 458999999987
Q ss_pred CC-----cccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000838 771 KK-----HETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNG 844 (1262)
Q Consensus 771 ~~-----~~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 844 (1262)
.. ...+++.+||++|++. .+...|++||+.+..... ..+.++.+++++++++.+||.+..++. ++.
T Consensus 70 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~ 141 (283)
T PRK13636 70 IDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THC 141 (283)
T ss_pred CCCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----ccc
Confidence 63 1234578999999974 234579999998864322 223444456688999999998877765 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 845 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 845 lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|+++
T Consensus 142 LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~ 213 (283)
T PRK13636 142 LSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVF 213 (283)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEE
Confidence 9999999999999999999999999999999999999999999999865 899999999975 3556788753
No 229
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=321.52 Aligned_cols=190 Identities=23% Similarity=0.334 Sum_probs=156.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCC---------------------------CcccceEEeec
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGE---------------------------FVPQRTAAYIS 53 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~---------------------------~~~~~~~~yv~ 53 (1262)
+++|+||||||||||+++|+|.++|+ +|+|+++|.+... ...++.+|||+
T Consensus 35 ~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~ 111 (305)
T PRK13651 35 FIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVF 111 (305)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccccchHHHHHhceEEEe
Confidence 47999999999999999999999998 8999999876421 11245799999
Q ss_pred ccc-CCCCCCCHHHHHHHHHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-c
Q 000838 54 QHD-NHIGEMTVRETLAFSARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-N 131 (1262)
Q Consensus 54 Q~~-~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~ 131 (1262)
|++ ..+...||+|||.|+....+.. .++..++++++++.+||+ +
T Consensus 112 Q~~~~~l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~ 157 (305)
T PRK13651 112 QFAEYQLFEQTIEKDIIFGPVSMGVS----------------------------------KEEAKKRAAKYIELVGLDES 157 (305)
T ss_pred eCcccccccccHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChh
Confidence 985 3445679999999876432210 011234567889999996 5
Q ss_pred cccccccCCcccccccccchhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHH
Q 000838 132 CADILVGDEMIRGISGGQKKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYN 211 (1262)
Q Consensus 132 ~~~t~vg~~~~~~LSGGqkqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 211 (1262)
..+ +.+..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++.+ . +++|++++|+.+++.+
T Consensus 158 ~~~-----~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 158 YLQ-----RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-GKTIILVTHDLDNVLE 230 (305)
T ss_pred hhh-----CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeeCHHHHHH
Confidence 555 55678999999999999999999999999999999999999999999998753 3 4567779999999999
Q ss_pred hccceEEecCCeEEEecCcchHH
Q 000838 212 LFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 212 ~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
.||||++|++|++++.|+++++.
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999988764
No 230
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-33 Score=311.99 Aligned_cols=204 Identities=23% Similarity=0.224 Sum_probs=166.0
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 477889987763 3469999999999999999999999999999999999876 4589999999875
Q ss_pred Ccc---c-ccceEEEecCCCCCCCCCCHHHHHHHHHHhhcC----------C--CCCHHHHHHHHHHHHHHcCCcccccc
Q 000838 772 KHE---T-FARISGYCEQNDIHSPFVTVHESLAFSAWLRLA----------P--EVDSETRKMFIEEIMELVELNPLRQS 835 (1262)
Q Consensus 772 ~~~---~-~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~----------~--~~~~~~~~~~~~~~l~~l~l~~~~~~ 835 (1262)
... . .+..++|++|++.+++.+|+.||+.+....... . .....+..+.++++++.+|+.+..++
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 421 1 234589999999999999999999985321100 0 00112233457888999999877766
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000838 836 LVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 914 (1262)
Q Consensus 836 ~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 914 (1262)
.+ ..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+..|+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 54 479999999999999999999999999999999999999999999999775 899999999975 45667787
Q ss_pred hc
Q 000838 915 AI 916 (1262)
Q Consensus 915 ~~ 916 (1262)
++
T Consensus 224 i~ 225 (255)
T PRK11300 224 IY 225 (255)
T ss_pred EE
Confidence 53
No 231
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6.7e-34 Score=350.22 Aligned_cols=193 Identities=26% Similarity=0.391 Sum_probs=155.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc---cceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
.+||+|+||||||||+|+|+|+++|. +|+|.+||.|+...+. |+++|||+||+.+| +-||+||+.++...
T Consensus 501 ~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gSI~eNi~l~~p~--- 573 (709)
T COG2274 501 KVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLF-SGSIRENIALGNPE--- 573 (709)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhh-cCcHHHHHhcCCCC---
Confidence 37999999999999999999999998 9999999999876543 68999999998665 67999999985421
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
...+...+++ ...+ ++ -...+++..+||.+|+ ...+||||||||++|||
T Consensus 574 -~~~e~i~~A~---------------------~~ag------~~--~fI~~lP~gy~t~v~E-~G~~LSGGQrQrlalAR 622 (709)
T COG2274 574 -ATDEEIIEAA---------------------QLAG------AH--EFIENLPMGYDTPVGE-GGANLSGGQRQRLALAR 622 (709)
T ss_pred -CCHHHHHHHH---------------------HHhC------cH--HHHHhccccccccccc-CCCCCCHHHHHHHHHHH
Confidence 1111111221 1111 01 1234689999999995 56689999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
||+++|+||+||||||+||+.+...|.+.|.+.. .++|+|+ ++|. ....+.||||+||++|+++++|+++++.+
T Consensus 623 aLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~-IaHR-l~ti~~adrIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 623 ALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVII-IAHR-LSTIRSADRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred HhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEE-EEcc-chHhhhccEEEEccCCceeccCCHHHHHH
Confidence 9999999999999999999999999999998863 3456555 5554 45778999999999999999999999876
No 232
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-33 Score=312.22 Aligned_cols=203 Identities=27% Similarity=0.341 Sum_probs=166.1
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 56788887763 3569999999999999999999999999999999999866 45899999998653
Q ss_pred c---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 773 H---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRL-APEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 773 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
. ..+++.++|++|+..+++.+|+.||+.++..... ......+..++.++++++.+|+.+..++. +..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----LTDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCHH
Confidence 2 2345679999999988888999999987521100 00111123345578899999998777765 3579999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||++||||++.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+.+|+++
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~ 209 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLV 209 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEE
Confidence 999999999999999999999999999999999999999998777999999999975 5667788753
No 233
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-33 Score=310.26 Aligned_cols=201 Identities=24% Similarity=0.281 Sum_probs=163.3
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEC
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSIKIS 767 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~~~ 767 (1262)
..+.++|+++.+. ++.+|+|+||++++||+++|+|+||||||||+++|+|..++ .+.+|+|.++
T Consensus 11 ~~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~ 77 (258)
T PRK14268 11 PQIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIE 77 (258)
T ss_pred eeEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEEC
Confidence 3578899988763 24699999999999999999999999999999999997653 1358999999
Q ss_pred CccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000838 768 GYPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVG 838 (1262)
Q Consensus 768 g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~ 838 (1262)
|.+... ..+++.++|++|++.+++ +|+.||+.+....+ ..+.+..++.++++++.+++.+ ..++.
T Consensus 78 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 151 (258)
T PRK14268 78 GEDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP-- 151 (258)
T ss_pred CEEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC--
Confidence 987532 134567999999988887 89999999865432 1233334456788999998842 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 839 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 839 ~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||++. ++.+..|+.
T Consensus 152 ---~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i 223 (258)
T PRK14268 152 ---ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYT 223 (258)
T ss_pred ---hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEE
Confidence 457999999999999999999999999999999999999999999999864 799999999975 455667774
No 234
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-33 Score=312.17 Aligned_cols=198 Identities=25% Similarity=0.365 Sum_probs=158.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 105 (241)
T cd03256 29 FVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLG 105 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcc
Confidence 47999999999999999999999988 999999999875432 245799999999889999999999875421
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.. .... ...+. ...+..++++++++.+||.+..+ ..+..|||||||||+
T Consensus 106 ~~--~~~~---------~~~~~---------------~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv~ 154 (241)
T cd03256 106 RR--STWR---------SLFGL---------------FPKEEKQRALAALERVGLLDKAY-----QRADQLSGGQQQRVA 154 (241)
T ss_pred cc--hhhh---------hhccc---------------CcHHHHHHHHHHHHHcCChhhhC-----CCcccCCHHHHHHHH
Confidence 10 0000 00000 00011234677899999987665 445689999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|++++|+.+++..+||++++|++|++++.|+++++
T Consensus 155 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (241)
T cd03256 155 IARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREE-GITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAEL 232 (241)
T ss_pred HHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHh
Confidence 9999999999999999999999999999999999875433 45677789999999999999999999999999988765
No 235
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-33 Score=310.16 Aligned_cols=204 Identities=23% Similarity=0.230 Sum_probs=165.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 467889988763 246999999999999999999999999999999999987642 3589999999
Q ss_pred ccCC-----cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000838 769 YPKK-----HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 839 (1262)
Q Consensus 769 ~~~~-----~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 839 (1262)
.++. ...+++.++|++|++.+++.+|+.||+.+....+.. ....+..++.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8763 123456799999999999999999999886543211 1123334455788999998853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||++. ++....|+++
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~ 219 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVA 219 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999975 4566778753
No 236
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.3e-33 Score=308.65 Aligned_cols=180 Identities=26% Similarity=0.383 Sum_probs=149.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-------ccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-------PQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++..
T Consensus 32 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~ 108 (218)
T cd03255 32 FVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLL 108 (218)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHh
Confidence 47999999999999999999999988 999999999875432 13579999999989999999999998764
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.++.. ..+.++.++++++.+||++..+ +.++.||||||||+
T Consensus 109 ~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv 149 (218)
T cd03255 109 LAGVP----------------------------------KKERRERAEELLERVGLGDRLN-----HYPSELSGGQQQRV 149 (218)
T ss_pred hcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhh-----cChhhcCHHHHHHH
Confidence 33210 0011234677899999987666 34567999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeE
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQI 224 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i 224 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++. .||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKE-AGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 9999999999999999999999999999999999987542 2456777889888886 9999999999974
No 237
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=321.68 Aligned_cols=200 Identities=22% Similarity=0.422 Sum_probs=160.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-------------------cccceEEeecccc--CCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-------------------VPQRTAAYISQHD--NHI 59 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-------------------~~~~~~~yv~Q~~--~~~ 59 (1262)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.+. ..++.++||+|++ .++
T Consensus 54 ~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~ 130 (320)
T PRK13631 54 IYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLF 130 (320)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHHhcEEEEEECchhccc
Confidence 47999999999999999999999998 99999999887432 1246799999986 355
Q ss_pred CCCCHHHHHHHHHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-cccccccc
Q 000838 60 GEMTVRETLAFSARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVG 138 (1262)
Q Consensus 60 ~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg 138 (1262)
+ .||+||+.|+....+. ..++..++++++++.+||+ +..+
T Consensus 131 ~-~tv~eni~~~~~~~~~----------------------------------~~~~~~~~~~~~l~~~gL~~~~~~---- 171 (320)
T PRK13631 131 K-DTIEKDIMFGPVALGV----------------------------------KKSEAKKLAKFYLNKMGLDDSYLE---- 171 (320)
T ss_pred c-chHHHHHHhhHHhcCC----------------------------------CHHHHHHHHHHHHHHcCCChhHhc----
Confidence 4 5999999987532210 0011223567789999996 4444
Q ss_pred CCcccccccccchhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEE
Q 000838 139 DEMIRGISGGQKKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIIL 218 (1262)
Q Consensus 139 ~~~~~~LSGGqkqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~v 218 (1262)
+.+.+|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++.+ + +++|++++|+.+++.+.||+|++
T Consensus 172 -~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtHd~~~~~~~adri~v 248 (320)
T PRK13631 172 -RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITHTMEHVLEVADEVIV 248 (320)
T ss_pred -CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEE
Confidence 45678999999999999999999999999999999999999999999988653 3 45677799999999999999999
Q ss_pred ecCCeEEEecCcchHHH---HHHhCCCCCC
Q 000838 219 LSDGQIVYQGPRELVLE---FFESMGFKCP 245 (1262)
Q Consensus 219 l~~G~i~~~G~~~~~~~---~~~~~g~~~p 245 (1262)
|++|++++.|+++++.+ .++..|+..|
T Consensus 249 l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p 278 (320)
T PRK13631 249 MDKGKILKTGTPYEIFTDQHIINSTSIQVP 278 (320)
T ss_pred EECCEEEEeCCHHHHhcCHHHHHHcCCCCC
Confidence 99999999999887642 2334454443
No 238
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-33 Score=313.82 Aligned_cols=199 Identities=23% Similarity=0.296 Sum_probs=165.1
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++ +++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 45788887763 12359999999999999999999999999999999999876 45899999998763
Q ss_pred c----ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 773 H----ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 773 ~----~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
. ...++.++|++|++. .+...|+.||+.+..... ..+..+.++.++++++.+|+.+..+..+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 234567999999975 356689999998765332 2234444566889999999988777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||++.. + +..|++
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~-~-~~~d~v 205 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEE-L-HDADRI 205 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-H-hhCCEE
Confidence 99999999999999999999999999999999999999999998779999999999863 4 567775
No 239
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-33 Score=298.37 Aligned_cols=185 Identities=30% Similarity=0.565 Sum_probs=154.3
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEECCcc
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSIKISGYP 770 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~ 770 (1262)
.+.|+|+++.++.+ .+++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999998643 13467999999999999999999999999999999999986532 468999999987
Q ss_pred CCc--ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 771 KKH--ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 771 ~~~--~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
... ...++.++|++|++.+++.+||+||+.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999999999999999998753210 1222 3479999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++ +.|+|+++|+...++.+..|+++
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~ 191 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVL 191 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEE
Confidence 999999999999999999999999999999999999999999765 67888887776567777888753
No 240
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-33 Score=311.52 Aligned_cols=190 Identities=25% Similarity=0.379 Sum_probs=158.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++....+.
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 105 (242)
T cd03295 29 FLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLKW 105 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999988 999999998875432 245799999999899999999999886543211
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcc--cccccccCCcccccccccchhhHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDN--CADILVGDEMIRGISGGQKKRVTT 155 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~--~~~t~vg~~~~~~LSGGqkqRvsi 155 (1262)
. ..+..+.+.++++.+||++ ..+ +.++.|||||||||+|
T Consensus 106 ~----------------------------------~~~~~~~~~~~l~~l~l~~~~~~~-----~~~~~LS~G~~qrv~l 146 (242)
T cd03295 106 P----------------------------------KEKIRERADELLALVGLDPAEFAD-----RYPHELSGGQQQRVGV 146 (242)
T ss_pred C----------------------------------HHHHHHHHHHHHHHcCCCcHHHHh-----cChhhCCHHHHHHHHH
Confidence 0 0011234667899999985 444 4567899999999999
Q ss_pred HHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 156 GEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 156 A~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+.+|++++|++|++++.|+++++
T Consensus 147 aral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 223 (242)
T cd03295 147 ARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEI 223 (242)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999999999987543 245677789999999999999999999999999987765
No 241
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-33 Score=312.72 Aligned_cols=205 Identities=28% Similarity=0.380 Sum_probs=167.4
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 10 ~~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~ 74 (265)
T PRK10575 10 TTFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQP 74 (265)
T ss_pred ceEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEe
Confidence 3578899988763 2469999999999999999999999999999999999876 458999999986
Q ss_pred CCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 771 KKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLA-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
... ..+++.++|++|+..+++.+|+.||+.+....... ........++.++++++.+++.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 149 (265)
T PRK10575 75 LESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLS 149 (265)
T ss_pred hhhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCC
Confidence 532 23456799999998888889999999875321100 00111223455788999999987766654 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+..|+++
T Consensus 150 gG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~ 219 (265)
T PRK10575 150 GGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLV 219 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999765 899999999975 5667778753
No 242
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-33 Score=314.66 Aligned_cols=201 Identities=26% Similarity=0.291 Sum_probs=167.8
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 4778999887731 12459999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 772 KH---ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
.. ...++.+||++|++. .++..||.||+.+..... ..+.++.+++++++++.+||.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 43 234567999999973 666789999998865432 1233444566899999999988777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||++.. + +.+|++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~i 210 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADRV 210 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCEE
Confidence 9999999999999999999999999999999999999999999876 8999999999863 3 457874
No 243
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.5e-33 Score=309.92 Aligned_cols=189 Identities=21% Similarity=0.334 Sum_probs=155.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCC-----CCCCceeEEEEECCccCCCCc-----ccceEEeeccccCCCCCCCHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKL-----DSSLKVSGRVTYNGHNMGEFV-----PQRTAAYISQHDNHIGEMTVRETLAF 70 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~-----~~~~~~~G~v~~~g~~~~~~~-----~~~~~~yv~Q~~~~~~~lTv~e~l~f 70 (1262)
+++|+||||||||||+++|+|.+ +|. +|+|.++|.++.... .++.++|++|++.++ .+||+||+.+
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~ 103 (227)
T cd03260 28 ITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAY 103 (227)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHh
Confidence 47999999999999999999999 777 999999999875432 245799999998877 7999999998
Q ss_pred HHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccc
Q 000838 71 SARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQK 150 (1262)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqk 150 (1262)
+....+... ..+.+++++++++.+||.+..+..+. +.+||||||
T Consensus 104 ~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~ 147 (227)
T cd03260 104 GLRLHGIKL---------------------------------KEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQ 147 (227)
T ss_pred HHHhcCCCc---------------------------------HHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHH
Confidence 654321100 00112346678999999876553220 468999999
Q ss_pred hhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 151 KRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 151 qRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
||++|||||+.+|++++|||||+|||+.++..+++.|++.++ + ++|++++|+.+++.+.||++++|++|++++.|++
T Consensus 148 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (227)
T cd03260 148 QRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPT 224 (227)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 999999999999999999999999999999999999998643 3 6677899999999999999999999999999987
Q ss_pred ch
Q 000838 231 EL 232 (1262)
Q Consensus 231 ~~ 232 (1262)
++
T Consensus 225 ~~ 226 (227)
T cd03260 225 EQ 226 (227)
T ss_pred cc
Confidence 65
No 244
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-33 Score=309.51 Aligned_cols=203 Identities=20% Similarity=0.249 Sum_probs=165.1
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
.+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 467889988763 246999999999999999999999999999999999986532 2589999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 839 (1262)
.+... ...++.++|++|++.+++.+|+.||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999999999999999988654331 1123344556788999999842 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+.+||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+..|+++
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~ 218 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTA 218 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999864 689999999975 4666778753
No 245
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.8e-33 Score=308.00 Aligned_cols=188 Identities=30% Similarity=0.443 Sum_probs=157.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC--cccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF--VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|++||+.+.....+..
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~ 106 (220)
T cd03263 30 IFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKGLP 106 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcCCC
Confidence 47999999999999999999999988 99999999987532 22456999999998888999999998865432210
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
..+..+.++++++.+||.+..++. +..||||||||++||||
T Consensus 107 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~a 147 (220)
T cd03263 107 ----------------------------------KSEIKEEVELLLRVLGLTDKANKR-----ARTLSGGMKRKLSLAIA 147 (220)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCCHHHHhCh-----hhhCCHHHHHHHHHHHH
Confidence 001123456789999998777644 45799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
|+.+|++++|||||+|||+.++..+.+.|++.++ + .+|++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999998642 3 6677799999999999999999999999999987653
No 246
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=6.8e-33 Score=302.94 Aligned_cols=203 Identities=24% Similarity=0.345 Sum_probs=167.6
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+... .+.+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5678888765310 012579999999999999999999999999999999999876 45899999998753
Q ss_pred c------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 773 H------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
. ...++.++|++|++.+++.+|+.||+.+...... ....++.++.++++++.+|+.+..++. ++.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 2 1245779999999999998999999998654321 123344456688999999998777665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhh
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+..|++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v 211 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRI 211 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEE
Confidence 9999999999999999999999999999999999999999999876 4899999999974 45677764
No 247
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-33 Score=312.73 Aligned_cols=201 Identities=26% Similarity=0.341 Sum_probs=166.7
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++. .+.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 568888887631 2358999999999999999999999999999999999876 45899999998753
Q ss_pred c---ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 773 H---ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 773 ~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
. ...++.++|++|++. .+...||.||+.+..... ..+.+..+++++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 2 234567899999974 334589999998765322 2334445566889999999988777664 579999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+..|+++
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~ 209 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIY 209 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999999875 899999999976 5667788753
No 248
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-33 Score=319.51 Aligned_cols=199 Identities=28% Similarity=0.428 Sum_probs=166.8
Q ss_pred CCcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECC
Q 000838 689 EPHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISG 768 (1262)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g 768 (1262)
.+..++|+|+++++. +++++|+++||+|++||.+||+|+|||||||++|+|.+... .+|+|++||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 345699999999885 23459999999999999999999999999999999998765 479999999
Q ss_pred ccCC---cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-------cccccc
Q 000838 769 YPKK---HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-------RQSLVG 838 (1262)
Q Consensus 769 ~~~~---~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~ 838 (1262)
.+++ .+..|+.+||||||..++. -|+.+|+.++ ++..+.++ +-++.+..|+.+. ..+.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YG-----n~sas~ee----V~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYG-----NPSASDEE----VVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcC-----CCCcCHHH----HHHHHHHcCcHHHHHhccccchhhHh
Confidence 9864 3567899999999988875 6999999985 23344333 5666777776643 345566
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 839 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 839 ~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.. ...|||||||||+||||++++|+|+++|||||+||..+.+++++.+.+. ..|+|+|++.|+. ++...||+++
T Consensus 483 er-G~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~ 556 (591)
T KOG0057|consen 483 ER-GLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKII 556 (591)
T ss_pred hc-ccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEE
Confidence 54 4569999999999999999999999999999999999999999999984 4589999999986 4889999965
No 249
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-33 Score=314.55 Aligned_cols=189 Identities=24% Similarity=0.313 Sum_probs=156.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccC-CCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDN-HIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++..||+||+.|+....+
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~ 109 (274)
T PRK13647 33 KTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNMG 109 (274)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHcC
Confidence 47999999999999999999999998 999999999875432 2357999999863 4557899999998654221
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. ..+.+++++++++.+||.+..+ +.+..|||||||||+||
T Consensus 110 ~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~-----~~~~~LSgG~~qrv~la 150 (274)
T PRK13647 110 LD----------------------------------KDEVERRVEEALKAVRMWDFRD-----KPPYHLSYGQKKRVAIA 150 (274)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHCCCHHHhc-----CChhhCCHHHHHHHHHH
Confidence 10 0012234677899999987766 44567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
|||+.+|++++|||||+|||+.++.++.+.|+++++ . +.+|++++|+.+++.+.||||++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999999998754 3 45677799999999999999999999999999998653
No 250
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.9e-33 Score=307.31 Aligned_cols=184 Identities=28% Similarity=0.426 Sum_probs=153.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC--cccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF--VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+....++..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~ 109 (218)
T cd03266 33 VTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYGLK 109 (218)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcCCC
Confidence 47999999999999999999999988 99999999887532 22467999999998889899999998755432110
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
.++..++++++++.+||.+..+. .++.||||||||++||||
T Consensus 110 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~lara 150 (218)
T cd03266 110 ----------------------------------GDELTARLEELADRLGMEELLDR-----RVGGFSTGMRQKVAIARA 150 (218)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCCHHHHhh-----hhhhcCHHHHHHHHHHHH
Confidence 00122356778999999877663 456799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
|+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++...+|++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998743 3 456777899999999999999999999998754
No 251
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-33 Score=313.03 Aligned_cols=200 Identities=25% Similarity=0.353 Sum_probs=163.6
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 45788887763 2458999999999999999999999999999999999876 45899999998753
Q ss_pred c-----ccccceEEEecCCCCC-CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 773 H-----ETFARISGYCEQNDIH-SPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~-----~~~~~~~~~v~q~~~~-~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
. ...++.++|++|++.. +...|+.||+.+....+ ....++.++.++++++.+|+.+..++.+ ..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1335679999999753 34568999998764332 1233344456788999999987776653 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+..|+.+
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~ 207 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVY 207 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999877899999999975 4556678753
No 252
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=307.99 Aligned_cols=208 Identities=23% Similarity=0.287 Sum_probs=164.1
Q ss_pred CcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEE
Q 000838 690 PHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGSIKI 766 (1262)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~~ 766 (1262)
|..+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.+
T Consensus 4 ~~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 70 (253)
T PRK14242 4 PPKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILL 70 (253)
T ss_pred CcEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEE
Confidence 34688999998773 2469999999999999999999999999999999999742 1 135899999
Q ss_pred CCccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000838 767 SGYPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPG 841 (1262)
Q Consensus 767 ~g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 841 (1262)
+|.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+..+++++++++.+++.+....... ..
T Consensus 71 ~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~ 146 (253)
T PRK14242 71 DGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLH-ES 146 (253)
T ss_pred CCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhh-CC
Confidence 9987532 134567999999988887 5999999886543311 1223344567889999998542211111 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 842 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 842 ~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||++. ++.+..|+++
T Consensus 147 ~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~ 219 (253)
T PRK14242 147 ALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTA 219 (253)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999854 799999999975 4556778753
No 253
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-33 Score=309.39 Aligned_cols=207 Identities=20% Similarity=0.245 Sum_probs=166.5
Q ss_pred CCCCcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEE
Q 000838 687 PFEPHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGS 763 (1262)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~--~-~~~~G~ 763 (1262)
|.+...+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+
T Consensus 8 ~~~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~ 74 (260)
T PRK10744 8 ATAPSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGE 74 (260)
T ss_pred cCCCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceE
Confidence 34456788999998773 2369999999999999999999999999999999999764 1 135899
Q ss_pred EEECCccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----ccc
Q 000838 764 IKISGYPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQ 834 (1262)
Q Consensus 764 i~~~g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~ 834 (1262)
|.++|.+... ...++.++|++|++.+++ .|++||+.+...... ..+.++.+++++++++.+++.+ ..+
T Consensus 75 i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 151 (260)
T PRK10744 75 ILLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLH 151 (260)
T ss_pred EEECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHh
Confidence 9999987531 234567999999988887 899999987653221 1233344456889999999853 233
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000838 835 SLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 914 (1262)
Q Consensus 835 ~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 914 (1262)
.. +..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. +++|||++||++. ++.+..|+
T Consensus 152 ~~-----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~ 224 (260)
T PRK10744 152 QS-----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDY 224 (260)
T ss_pred cC-----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCE
Confidence 33 45799999999999999999999999999999999999999999999986 4789999999975 45566777
Q ss_pred hc
Q 000838 915 AI 916 (1262)
Q Consensus 915 ~~ 916 (1262)
++
T Consensus 225 i~ 226 (260)
T PRK10744 225 TA 226 (260)
T ss_pred EE
Confidence 53
No 254
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.8e-33 Score=303.43 Aligned_cols=180 Identities=24% Similarity=0.368 Sum_probs=151.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-cccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+.
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~-- 102 (208)
T cd03268 28 IYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTARENLRLLARLLGI-- 102 (208)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcCC--
Confidence 47999999999999999999999988 99999999887532 2245799999999889999999999886532110
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
.+++++++++.+||.+..+. .+..|||||||||+||||+
T Consensus 103 ------------------------------------~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~la~al 141 (208)
T cd03268 103 ------------------------------------RKKRIDEVLDVVGLKDSAKK-----KVKGFSLGMKQRLGIALAL 141 (208)
T ss_pred ------------------------------------cHHHHHHHHHHcCCHHHHhh-----hHhhCCHHHHHHHHHHHHH
Confidence 01235677899999877664 4567999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
+.+|++++|||||+|||+.++..+.+.|++..+ . +.++++++|+.+++.+.+|++++|++|++++.|
T Consensus 142 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 142 LGNPDLLILDEPTNGLDPDGIKELRELILSLRD-Q-GITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999998654 3 456777899999999999999999999998765
No 255
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.3e-33 Score=270.16 Aligned_cols=181 Identities=25% Similarity=0.357 Sum_probs=155.9
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 2 TLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 2 ~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
++|+|||||||||||-+++|+..|+ +|+|.+.|+++..++ +.+.+|+|+|...++|++|.-||+...+++
T Consensus 39 vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL 115 (228)
T COG4181 39 VAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFHLIPNLTALENVALPLEL 115 (228)
T ss_pred EEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEEeeeccccchhhhhccchhhh
Confidence 7999999999999999999999998 999999999986543 237899999999999999999999998888
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
++-..+ +......+.|+.+||.+..+ .++.+|||||+|||+
T Consensus 116 ~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl~-----HyP~qLSGGEQQRVA 156 (228)
T COG4181 116 RGESSA----------------------------------DSRAGAKALLEAVGLGKRLT-----HYPAQLSGGEQQRVA 156 (228)
T ss_pred cCCccc----------------------------------cHHHHHHHHHHHhCcccccc-----cCccccCchHHHHHH
Confidence 752111 12234567899999998765 577899999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEE
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVY 226 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~ 226 (1262)
||||+...|+|||.||||-.||..+..+|.++|-.+.+. .+++.+.+||| +.+...|||++-|.+|+++.
T Consensus 157 iARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD-~~LA~Rc~R~~r~~~G~l~~ 226 (228)
T COG4181 157 LARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHD-PQLAARCDRQLRLRSGRLVE 226 (228)
T ss_pred HHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCC-HHHHHhhhheeeeecceecc
Confidence 999999999999999999999999999999999877654 46777778998 45677899999999999874
No 256
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2e-33 Score=303.72 Aligned_cols=177 Identities=26% Similarity=0.346 Sum_probs=147.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccC-CCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDN-HIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .++.+|++||+.++....+
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~--- 101 (205)
T cd03226 28 IIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVREELLLGLKELD--- 101 (205)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHHHHHhhhhhhcC---
Confidence 47999999999999999999999998 9999999988754334567999999963 3456799999987542110
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
+..++++++++.+||.+..+. .++.||||||||++|||||
T Consensus 102 -----------------------------------~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~laral 141 (205)
T cd03226 102 -----------------------------------AGNEQAETVLKDLDLYALKER-----HPLSLSGGQKQRLAIAAAL 141 (205)
T ss_pred -----------------------------------ccHHHHHHHHHHcCCchhcCC-----CchhCCHHHHHHHHHHHHH
Confidence 001245678999999887764 4567999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEE
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIV 225 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~ 225 (1262)
+.+|++++|||||+|||+.++..+.+.|++.++ . +.+|++++|+.+++.+.||++++|++|+++
T Consensus 142 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 142 LSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-Q-GKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999999999999999999998753 3 456777899999999999999999999874
No 257
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-32 Score=303.97 Aligned_cols=199 Identities=28% Similarity=0.377 Sum_probs=166.8
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.+. .+.+++|+|+++++||+++|+||||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 4677877663 2469999999999999999999999999999999999876 357999999987643
Q ss_pred c-cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000838 774 E-TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKR 852 (1262)
Q Consensus 774 ~-~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr 852 (1262)
. ..++.++|++|++.+++.+|+.||+.+....+. .+....++.++++++.+|+.+..+..+ ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 1 234679999999999888999999987654331 223334456788999999988777653 5799999999
Q ss_pred HHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 853 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 853 l~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
++|||||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|+++
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~ 202 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIA 202 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 99999999999999999999999999999999999998765 899999999984 4667788753
No 258
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-33 Score=312.19 Aligned_cols=205 Identities=23% Similarity=0.284 Sum_probs=168.0
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~ 70 (265)
T PRK10253 6 ARLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEH 70 (265)
T ss_pred cEEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEE
Confidence 3678899988773 3469999999999999999999999999999999999876 458999999987
Q ss_pred CCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 771 KKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLA-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
... ...++.++|++|++.+++.+|+.||+.+....... .....+..++.++++++.+|+.+..++. +..||
T Consensus 71 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 145 (265)
T PRK10253 71 IQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLS 145 (265)
T ss_pred hhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCC
Confidence 532 23345799999999988889999999864211100 0001123345678899999998776665 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|+++
T Consensus 146 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~ 215 (265)
T PRK10253 146 GGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLI 215 (265)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999764 899999999985 5777888753
No 259
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.9e-33 Score=310.71 Aligned_cols=205 Identities=26% Similarity=0.311 Sum_probs=166.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEECCcc
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSIKISGYP 770 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~ 770 (1262)
.+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 467889887763 346999999999999999999999999999999999987643 236999999986
Q ss_pred CCc--------ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000838 771 KKH--------ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLA-----PEVDSETRKMFIEEIMELVELNPLRQSLV 837 (1262)
Q Consensus 771 ~~~--------~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~-----~~~~~~~~~~~~~~~l~~l~l~~~~~~~~ 837 (1262)
... ...++.++|++|++.+++.+|+.||+.+......+ .....++.+++++++++.+|+.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 12345789999999999999999999875321000 01112234456889999999987777654
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 838 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 838 ~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. .+.+..|++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i 223 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERI 223 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 479999999999999999999999999999999999999999999999764 899999999985 355667774
No 260
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-33 Score=311.64 Aligned_cols=202 Identities=25% Similarity=0.312 Sum_probs=166.8
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~ 72 (271)
T PRK13632 6 VMIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGIT 72 (271)
T ss_pred eEEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEe
Confidence 35788999887631 12468999999999999999999999999999999999876 458999999987
Q ss_pred CCc---ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 771 KKH---ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
... ..+++.++|++|++. .++.+|+.||+.+..... ..+.++.++.++++++.+||.+..++.+ +.||
T Consensus 73 i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 144 (271)
T PRK13632 73 ISKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLS 144 (271)
T ss_pred cCcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCC
Confidence 642 234667999999974 567789999998864322 1233444556889999999988777764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|++.. + ...|++
T Consensus 145 ~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v 212 (271)
T PRK13632 145 GGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKV 212 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEE
Confidence 99999999999999999999999999999999999999999999766 5999999999863 3 457764
No 261
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3e-33 Score=306.76 Aligned_cols=187 Identities=21% Similarity=0.375 Sum_probs=154.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc----cceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP----QRTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++||+.++.....
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~ 104 (222)
T cd03224 28 IVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR 104 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC
Confidence 47999999999999999999999988 9999999988754321 3569999999989999999999988653221
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHh-CCcccccccccCCcccccccccchhhHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVL-GLDNCADILVGDEMIRGISGGQKKRVTT 155 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqkqRvsi 155 (1262)
. .+.+..++++++.+ ++++..+ ..++.||||||||++|
T Consensus 105 ~------------------------------------~~~~~~~~~~l~~~~~l~~~~~-----~~~~~LS~G~~qrv~l 143 (222)
T cd03224 105 R------------------------------------AKRKARLERVYELFPRLKERRK-----QLAGTLSGGEQQMLAI 143 (222)
T ss_pred c------------------------------------hhHHHHHHHHHHHHHhhhhhhh-----CchhhCCHHHHHHHHH
Confidence 0 00112344566666 4666555 4456799999999999
Q ss_pred HHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 156 GEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 156 A~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++.+.||++++|++|++++.|+.+++
T Consensus 144 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (222)
T cd03224 144 ARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAEL 219 (222)
T ss_pred HHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999998753 3 45677789999999999999999999999999987764
No 262
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=6.8e-33 Score=301.34 Aligned_cols=197 Identities=25% Similarity=0.328 Sum_probs=161.6
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ ..++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~---------------~~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 64 (213)
T TIGR01277 2 ALDKVRYEYE---------------HLPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTG 64 (213)
T ss_pred eEEeeeEEeC---------------CcceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEccc
Confidence 4677776652 13579999999999999999999999999999999876 458999999987542
Q ss_pred -ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000838 774 -ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKR 852 (1262)
Q Consensus 774 -~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr 852 (1262)
...++.++|++|++.+++.+|+.||+.+...... ... ...+++++++++.+|+.+..++. +..||||||||
T Consensus 65 ~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr 136 (213)
T TIGR01277 65 LAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGL--KLN-AEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQR 136 (213)
T ss_pred CChhccceEEEeccCccCCCCcHHHHHHhHhhccC--Ccc-HHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHH
Confidence 2345679999999999999999999987532211 111 22344578899999998777665 35799999999
Q ss_pred HHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 853 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 853 l~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
++|||||+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||++||++. ++.+..|+.+
T Consensus 137 l~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~ 200 (213)
T TIGR01277 137 VALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIA 200 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEE
Confidence 99999999999999999999999999999999999998765 899999999975 4556677753
No 263
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.1e-32 Score=309.73 Aligned_cols=210 Identities=24% Similarity=0.303 Sum_probs=165.5
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+......+ ..+++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 56788888774210000 0123579999999999999999999999999999999999876 45899999998754
Q ss_pred cc------cccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000838 773 HE------TFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVN 843 (1262)
Q Consensus 773 ~~------~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~ 843 (1262)
.. ..++.++|++|++ .+.+.+|+.||+.+..... ........+++++++++.+|+. +..+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 21 1356799999996 4667899999998754321 1122333445688999999996 555554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||++. .+.+..|+.+
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~ 222 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVA 222 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEE
Confidence 79999999999999999999999999999999999999999999998865 899999999975 4556778753
No 264
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-34 Score=275.96 Aligned_cols=204 Identities=24% Similarity=0.326 Sum_probs=168.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC----------c------ccceEEeeccccCCCCCCCH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF----------V------PQRTAAYISQHDNHIGEMTV 64 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~----------~------~~~~~~yv~Q~~~~~~~lTv 64 (1262)
++.|+|.|||||||+|+||.-+..|+ .|.|.+||..+.-. + .+.+.++|+|+.+++..+||
T Consensus 34 VisIIGsSGSGKSTfLRCiN~LE~P~---~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtv 110 (256)
T COG4598 34 VISIIGSSGSGKSTFLRCINFLEKPS---AGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTRLGMVFQHFNLWSHMTV 110 (256)
T ss_pred EEEEecCCCCchhHHHHHHHhhcCCC---CceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHHhhHhhhhcchhHHHHH
Confidence 36899999999999999999999998 99999999876311 1 12467999999999999999
Q ss_pred HHHHHHHHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccc
Q 000838 65 RETLAFSARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRG 144 (1262)
Q Consensus 65 ~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~ 144 (1262)
-||+.-+..- ....+..++.++++.+|..+||.+.+| .++..
T Consensus 111 LeNViEaPvh---------------------------------VLg~~k~ea~e~Ae~~L~kVGi~ek~~-----~YP~~ 152 (256)
T COG4598 111 LENVIEAPVH---------------------------------VLGVSKAEAIERAEKYLAKVGIAEKAD-----AYPAH 152 (256)
T ss_pred HHHHHhcchH---------------------------------hhcCCHHHHHHHHHHHHHHhCchhhhh-----cCccc
Confidence 9999764321 011123345566788999999999887 57778
Q ss_pred cccccchhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeE
Q 000838 145 ISGGQKKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQI 224 (1262)
Q Consensus 145 LSGGqkqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i 224 (1262)
|||||+||++|||||+.+|+++++|||||+|||+-.-++++.++++++. |+ +.+.+||.+..+.+...+++.|++|.|
T Consensus 153 LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeE-gr-TMv~VTHEM~FAR~Vss~v~fLh~G~i 230 (256)
T COG4598 153 LSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEE-GR-TMVVVTHEMGFARDVSSHVIFLHQGKI 230 (256)
T ss_pred cCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHh-CC-eEEEEeeehhHHHhhhhheEEeeccee
Confidence 9999999999999999999999999999999999999999999999863 44 455589999999999999999999999
Q ss_pred EEecCcchHHHHHHhCCCCCCCCCChhhHHh
Q 000838 225 VYQGPRELVLEFFESMGFKCPQRKGVADFLQ 255 (1262)
Q Consensus 225 ~~~G~~~~~~~~~~~~g~~~p~~~~~~~~~~ 255 (1262)
-++|+++++. ..|.......|+.
T Consensus 231 EE~G~P~qvf--------~nP~S~RlkqFls 253 (256)
T COG4598 231 EEEGPPEQVF--------GNPQSPRLKQFLS 253 (256)
T ss_pred cccCChHHHh--------cCCCCHHHHHHHH
Confidence 9999999873 3455444444443
No 265
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-33 Score=307.17 Aligned_cols=186 Identities=23% Similarity=0.311 Sum_probs=152.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-------cceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-------QRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|.++|+ +|+|+++|.++..... ++.++|++|++.+++.+|++||+.++..
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 113 (233)
T PRK11629 37 MMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLL 113 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHH
Confidence 47999999999999999999999988 9999999998764321 2469999999888899999999998654
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
..+.. ..+.+++++++++.+||++..+. .+..||||||||+
T Consensus 114 ~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~-----~~~~LSgG~~qrl 154 (233)
T PRK11629 114 IGKKK----------------------------------PAEINSRALEMLAAVGLEHRANH-----RPSELSGGERQRV 154 (233)
T ss_pred hcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhhC-----ChhhCCHHHHHHH
Confidence 32110 00112346778999999876663 4567999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
+||||++.+|+++||||||+|||+.++..+.+.|+++.+. ++++|++++|+.+++.. +|++++|++|++++.|+.
T Consensus 155 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~l~~G~i~~~~~~ 229 (233)
T PRK11629 155 AIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLEMRDGRLTAELSL 229 (233)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEEEECCEEEEEecc
Confidence 9999999999999999999999999999999999986543 34566778899888766 579999999999988764
No 266
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-33 Score=315.06 Aligned_cols=190 Identities=21% Similarity=0.338 Sum_probs=157.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeecccc-CCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHD-NHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~-~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ ..++..||+|||.|+....+
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~ 111 (279)
T PRK13650 35 WLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKG 111 (279)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhCC
Confidence 47999999999999999999999998 999999999885432 245799999996 36778899999998654321
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. .++..++++++++.+||++..+ +.+..||||||||++||
T Consensus 112 ~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~-----~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 112 IP----------------------------------HEEMKERVNEALELVGMQDFKE-----REPARLSGGQKQRVAIA 152 (279)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHCCCHhHhh-----CCcccCCHHHHHHHHHH
Confidence 10 0112334678899999987766 44567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||+.+|++|+|||||+|||+.++..+++.|+++++. .+++|++++|+.+++ ..||++++|++|+++..|+++++.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tilivtH~~~~~-~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDD-YQMTVISITHDLDEV-ALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999987543 345667788998888 589999999999999999988764
No 267
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=6e-33 Score=321.07 Aligned_cols=189 Identities=22% Similarity=0.303 Sum_probs=162.1
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc----cCCc---c---c-ccceEEEec
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGY----PKKH---E---T-FARISGYCE 784 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~----~~~~---~---~-~~~~~~~v~ 784 (1262)
+...+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|. +... . . .++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 45679999999999999999999999999999999999876 45899999995 2211 1 1 125799999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000838 785 QNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPS 864 (1262)
Q Consensus 785 q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~ 864 (1262)
|++.++|.+||.||+.++...+ ..+.++++++++++++.+||.+..+..+ .+||||||||++|||||+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999876443 2334555667899999999998877764 4799999999999999999999
Q ss_pred CcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 865 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 865 illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||||||+|||+.++..+++.|+++.++ |+|||++|||++ ++.+..|++
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI 235 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRI 235 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 99999999999999999999999999765 899999999976 567788885
No 268
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.8e-33 Score=326.51 Aligned_cols=194 Identities=23% Similarity=0.409 Sum_probs=161.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++||+|++.+++.+||+||+.++.....
T Consensus 31 iv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~- 106 (402)
T PRK09536 31 LVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHR- 106 (402)
T ss_pred EEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhc-
Confidence 47999999999999999999999998 999999999876533 24679999999988889999999998642110
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
..+.. ...+.+++++++++.+||.+..+ +.++.||||||||++|||
T Consensus 107 -~~~~~----------------------------~~~~~~~~v~~~le~vgl~~~~~-----~~~~~LSgGerQRv~IAr 152 (402)
T PRK09536 107 -SRFDT----------------------------WTETDRAAVERAMERTGVAQFAD-----RPVTSLSGGERQRVLLAR 152 (402)
T ss_pred -ccccC----------------------------CCHHHHHHHHHHHHHcCCchhhc-----CChhhCCHHHHHHHHHHH
Confidence 00000 00112345788899999988776 445689999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
||+++|++|+|||||+|||+.++.++++.|+++++ . +++|++++|+.+++.++|||+++|++|++++.|+++++.
T Consensus 153 AL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 153 ALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999999864 3 456777999999999999999999999999999988764
No 269
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-33 Score=313.13 Aligned_cols=204 Identities=25% Similarity=0.312 Sum_probs=163.4
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 66888888774210 001359999999999999999999999999999999999876 45899999998753
Q ss_pred c-------ccccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000838 773 H-------ETFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGV 842 (1262)
Q Consensus 773 ~-------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~ 842 (1262)
. ..+++.++|++|++ .+++ .|++||+.+..... ..+.++.++.++++++.++|.+ ..++. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23456799999996 3444 69999998764332 1233444556788999999973 44554 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
..||||||||++||+||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||++. ++.+..|+++
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~ 216 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVY 216 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEE
Confidence 579999999999999999999999999999999999999999999999877899999999975 4556678753
No 270
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=8.1e-33 Score=309.53 Aligned_cols=203 Identities=29% Similarity=0.403 Sum_probs=165.3
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 45778887663 3469999999999999999999999999999999999876 45899999998753
Q ss_pred c---ccccceEEEecCCCCCCCCCCHHHHHHHHHH-hhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 773 H---ETFARISGYCEQNDIHSPFVTVHESLAFSAW-LRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 773 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
. ...++.++|++|++.+++.+|+.||+.+... .+........+..+++.++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 2 2334568999999877788999999987531 110000111223446788999999987777654 479999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.+|+++
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~ 208 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVV 208 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999999877899999999986 5667788753
No 271
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.5e-33 Score=305.58 Aligned_cols=196 Identities=26% Similarity=0.286 Sum_probs=159.1
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCC
Confidence 4677877663 2469999999999999999999999999999999999876 458999999987532
Q ss_pred c----cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHH
Q 000838 774 E----TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVE-LNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 774 ~----~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-l~~~~~~~~~~~~~~~lSgG 848 (1262)
. ..++.++|++|++.+++.+|+.||+.+....+. .. .++..+++++.++ +.+..++. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHH
Confidence 1 124579999999999999999999988654321 11 1223566777776 45555554 4579999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+..|+++
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~ 203 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYY 203 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999998864 899999999975 4555677753
No 272
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=306.22 Aligned_cols=206 Identities=22% Similarity=0.302 Sum_probs=162.6
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCC---CCCeeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~---~~~~~~G~i~~~g 768 (1262)
.+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467888887763 246999999999999999999999999999999999952 2212479999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 843 (1262)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+..++.++++++.+++.+..+.... ..+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLK-ESAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcc
Confidence 87632 234567999999988887 6999999876543311 1223344567889999998643211111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|+++
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~ 216 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTA 216 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEE
Confidence 799999999999999999999999999999999999999999999985 4799999999986 4667788854
No 273
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.7e-33 Score=311.53 Aligned_cols=198 Identities=25% Similarity=0.339 Sum_probs=157.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 106 (243)
T TIGR02315 30 FVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLG 106 (243)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccc
Confidence 47999999999999999999999988 999999998875421 245799999999889999999999875321
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.. ..+. .. .. ....+.+++++++++.+||.+..+ +.+..|||||||||+
T Consensus 107 ~~--~~~~---~~------~~---------------~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgG~~qrv~ 155 (243)
T TIGR02315 107 YK--PTWR---SL------LG---------------RFSEEDKERALSALERVGLADKAY-----QRADQLSGGQQQRVA 155 (243)
T ss_pred cc--cchh---hh------hc---------------cccHHHHHHHHHHHHHcCcHhhhc-----CCcccCCHHHHHHHH
Confidence 00 0000 00 00 000112335677899999987666 445679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.++||++++|++|++++.|+++++
T Consensus 156 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 156 IARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 999999999999999999999999999999999987543 345677789999999999999999999999999987764
No 274
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=6e-33 Score=304.99 Aligned_cols=185 Identities=25% Similarity=0.376 Sum_probs=154.4
Q ss_pred eeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEecCCCCCCCCCCHHHHHH
Q 000838 721 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHETFARISGYCEQNDIHSPFVTVHESLA 800 (1262)
Q Consensus 721 l~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~ 800 (1262)
|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+|+.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999876 45899999998764321 12489999999999999999998
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHH
Q 000838 801 FSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 880 (1262)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~ 880 (1262)
+...... ...+.++.++.++++++.+|+.+..++.+ .+||||||||++|||+|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVL-PDLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 7632111 12233444556789999999987777653 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 881 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 881 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
..+.+.|++++++ |+|||++||++. ++.+..|+++
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~ 186 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVV 186 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 9999999998765 899999999975 4666788753
No 275
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1e-32 Score=304.39 Aligned_cols=190 Identities=29% Similarity=0.369 Sum_probs=158.2
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEec-CCCCCCCC
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH--ETFARISGYCE-QNDIHSPF 792 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~-q~~~~~~~ 792 (1262)
+.+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 34679999999999999999999999999999999999876 458999999976422 23456789997 55677788
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCC
Q 000838 793 VTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 872 (1262)
Q Consensus 793 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPt 872 (1262)
+|++|++.+....+. ...++.++.++++++.+|+.+..++.+ ..||||||||++||+||+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 999999988654432 223344456788999999988777764 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 873 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 873 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+|||+.++..+.+.|++++++ |+|||++||++. ++.+..|+.+
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~ 225 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVL 225 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEE
Confidence 999999999999999998765 899999999975 4556677643
No 276
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.1e-32 Score=309.40 Aligned_cols=179 Identities=21% Similarity=0.228 Sum_probs=133.8
Q ss_pred CcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc
Q 000838 690 PHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGY 769 (1262)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 769 (1262)
+..+.+.++++.+... .-.++.+++..++.-+..+++|+||+||||++|++.|... +..|.+.+.+
T Consensus 360 ~p~l~i~~V~f~y~p~-----------~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~- 425 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPS-----------EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP- 425 (582)
T ss_pred CCeeEEEeeeccCCCc-----------chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc-
Confidence 4567788887665421 1157899999999999999999999999999999999665 3456665543
Q ss_pred cCCcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHH
Q 000838 770 PKKHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-RQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 770 ~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgG 848 (1262)
+.+++|-.|..+-+-.+.|.+- .+....+ ++..+ +.+++-+..+||... +... +.+||||
T Consensus 426 -------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~--pG~~~----ee~r~hl~~~Gl~g~la~~s-----i~~LSGG 486 (582)
T KOG0062|consen 426 -------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSF--PGKTE----EEIRRHLGSFGLSGELALQS-----IASLSGG 486 (582)
T ss_pred -------cceecchhHhhhhHHHHHhHHH-HHHHHhC--CCCCH----HHHHHHHHhcCCCchhhhcc-----ccccCCc
Confidence 4568898887655444444432 2222222 22222 236778889999753 2222 4579999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCC
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 904 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~ 904 (1262)
||-||++|.....+|.+|+|||||+.||..+-..+.+.|+.. +..||++|||.
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~ 539 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDE 539 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcH
Confidence 999999999999999999999999999999999999888775 45799999984
No 277
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-32 Score=293.52 Aligned_cols=178 Identities=58% Similarity=0.912 Sum_probs=150.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++... .++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVKG---------GKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCCC---------CceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 467889988774210 12469999999999999999999999999999999999743224689999999876
Q ss_pred CcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000838 772 KHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRK 851 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 851 (1262)
. ...++.++|++|++.+++.+|++||+.+...+ + .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~-------------------~------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALL-------------------R------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHH-------------------h------------------cCCHHHhH
Confidence 4 34456799999999899999999999874210 0 49999999
Q ss_pred HHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 852 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 852 rl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|+|++||+++.++.+.+|+.+
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~ 180 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLL 180 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEE
Confidence 99999999999999999999999999999999999999887799999999998755677788753
No 278
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.6e-33 Score=313.24 Aligned_cols=192 Identities=20% Similarity=0.335 Sum_probs=158.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||.||+.++...
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~ 111 (269)
T PRK11831 35 ITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLRE 111 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHH
Confidence 47999999999999999999999988 999999998875422 235699999998888999999999886431
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
... ++ ..+.+..+.++++.+||.+..+. .+..||||||||++
T Consensus 112 ~~~---~~------------------------------~~~~~~~~~~~l~~~gl~~~~~~-----~~~~LSgGq~qrv~ 153 (269)
T PRK11831 112 HTQ---LP------------------------------APLLHSTVMMKLEAVGLRGAAKL-----MPSELSGGMARRAA 153 (269)
T ss_pred ccC---CC------------------------------HHHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHHHHHH
Confidence 100 00 00112345678999999887764 45679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999987543 3456777899999999999999999999999999987653
No 279
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-32 Score=314.45 Aligned_cols=207 Identities=17% Similarity=0.221 Sum_probs=166.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC-C-eeEEEEEECCc
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGSIKISGY 769 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~-~-~~~G~i~~~g~ 769 (1262)
.+.++|+++.+... .+...+|+||||++++||++||+|+||||||||+++|+|...+ + +.+|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~ 73 (326)
T PRK11022 3 LLNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQ 73 (326)
T ss_pred eEEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCE
Confidence 36788998877421 1125699999999999999999999999999999999997652 1 36899999998
Q ss_pred cCCc---cc----ccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc---ccccc
Q 000838 770 PKKH---ET----FARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL---RQSLV 837 (1262)
Q Consensus 770 ~~~~---~~----~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~---~~~~~ 837 (1262)
++.. .. +++.++|++|++ .+.|.+|+.+++........ ....++.++++.++++.+||.+. .+..
T Consensus 74 ~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~- 150 (326)
T PRK11022 74 DLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY- 150 (326)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC-
Confidence 7632 11 224699999998 47888999998876543321 22445556778999999999753 3333
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhh
Q 000838 838 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 838 ~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+.+|||||||||+|||||+.+|++|++||||+|||+.++.++++.|+++.+ .|.|+|++|||.+ .+.+..|++
T Consensus 151 ----p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri 224 (326)
T PRK11022 151 ----PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKI 224 (326)
T ss_pred ----chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 468999999999999999999999999999999999999999999999976 4899999999976 355677874
No 280
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=310.63 Aligned_cols=201 Identities=29% Similarity=0.350 Sum_probs=165.0
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+. +.+.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 46788887763 12358999999999999999999999999999999999876 45899999998763
Q ss_pred c-----ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 773 H-----ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~-----~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
. ...++.++|++|++. .+...||.||+.+..... ....++.++++.++++.++|.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 124567999999963 333479999998764321 2233444566889999999988777764 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|+++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~ 208 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVY 208 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999877999999999975 4556778753
No 281
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-33 Score=324.42 Aligned_cols=186 Identities=26% Similarity=0.407 Sum_probs=152.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
.++|+|+||||||||+++|+|+.+|+ +|+|.+||.+..+.. ++++++||+|++.+++ -|+||||.++....
T Consensus 349 ~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~~~~-- 422 (559)
T COG4988 349 LTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLARPDA-- 422 (559)
T ss_pred EEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccCCcC--
Confidence 37999999999999999999999998 999999999876654 5689999999997664 69999999854210
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCC------cccccccccCCcccccccccch
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGL------DNCADILVGDEMIRGISGGQKK 151 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL------~~~~~t~vg~~~~~~LSGGqkq 151 (1262)
. ++.+.++++..|| ++..||.+|+ ..++|||||+|
T Consensus 423 --s------------------------------------~e~i~~al~~a~l~~~v~~p~GLdt~ige-~G~~LSgGQ~Q 463 (559)
T COG4988 423 --S------------------------------------DEEIIAALDQAGLLEFVPKPDGLDTVIGE-GGAGLSGGQAQ 463 (559)
T ss_pred --C------------------------------------HHHHHHHHHHhcHHHhhcCCCcccchhcc-CCCCCCHHHHH
Confidence 0 1112233333333 4567899985 56789999999
Q ss_pred hhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 152 RVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 152 RvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
||++||||+.+++++++||||++||.++.+.|.+.|.++++ + +++++++|. .+....+|+|++|++|++++.|.++
T Consensus 464 RlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~-ktvl~itHr-l~~~~~~D~I~vld~G~l~~~g~~~ 539 (559)
T COG4988 464 RLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--Q-KTVLVITHR-LEDAADADRIVVLDNGRLVEQGTHE 539 (559)
T ss_pred HHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--C-CeEEEEEcC-hHHHhcCCEEEEecCCceeccCCHH
Confidence 99999999999999999999999999999999999998754 3 455557775 4566789999999999999999999
Q ss_pred hHHH
Q 000838 232 LVLE 235 (1262)
Q Consensus 232 ~~~~ 235 (1262)
++.+
T Consensus 540 ~L~~ 543 (559)
T COG4988 540 ELSE 543 (559)
T ss_pred HHhh
Confidence 8853
No 282
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-32 Score=314.43 Aligned_cols=211 Identities=24% Similarity=0.251 Sum_probs=169.5
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+....... ...+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 578899998875321000 00123579999999999999999999999999999999999876 3589999999876
Q ss_pred Cc------ccccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000838 772 KH------ETFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-LRQSLVGLPGV 842 (1262)
Q Consensus 772 ~~------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~ 842 (1262)
.. ..+++.++||+|++ .+.|.+|+.+++........ .....+.++++.++++.+||.+ ..++. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 32 13456799999997 57888999999987544321 2344455667899999999963 44554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
.+||||||||++|||||+.+|++|++||||++||..++..+++.|+++.++ |.|+|++|||.+ .+.+..|++
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv 225 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEV 225 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEE
Confidence 579999999999999999999999999999999999999999999999765 999999999975 345567774
No 283
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-32 Score=307.92 Aligned_cols=202 Identities=23% Similarity=0.248 Sum_probs=163.4
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~~~g 768 (1262)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 688999998773 24699999999999999999999999999999999997653 13689999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL----RQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~----~~~~~~~ 839 (1262)
.+... ..+++.++|++|++.+++. |+.||+.+....+.. .......+++++++++.+++.+. .++.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87532 2345679999999888874 999999986543321 11223334567889999999642 2332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+..|+.
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v 232 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRT 232 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEE
Confidence 457999999999999999999999999999999999999999999999865 789999999975 455666775
No 284
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-33 Score=302.60 Aligned_cols=185 Identities=23% Similarity=0.353 Sum_probs=153.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++......
T Consensus 26 ~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-- 100 (211)
T cd03298 26 ITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGLK-- 100 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhcccccccC--
Confidence 47999999999999999999999988 999999999875432 245799999999889999999999875421100
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
. ..+.+++++++++.+||++..++ .+..||||||||++|||||
T Consensus 101 ~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~ia~al 143 (211)
T cd03298 101 L--------------------------------TAEDRQAIEVALARVGLAGLEKR-----LPGELSGGERQRVALARVL 143 (211)
T ss_pred c--------------------------------cHHHHHHHHHHHHHcCCHHHHhC-----CcccCCHHHHHHHHHHHHH
Confidence 0 00112346778999999877664 4567999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
+.+|++++|||||+|||+.++..+.+.|+++.+. .+.+|++++|+..++.+.||++++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAE-TKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999987543 2456677899999999999999999999998654
No 285
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=306.92 Aligned_cols=211 Identities=22% Similarity=0.256 Sum_probs=168.0
Q ss_pred CCCCcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEE
Q 000838 687 PFEPHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGS 763 (1262)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~---~~~~G~ 763 (1262)
|.....+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 34455789999998773 24699999999999999999999999999999999997643 146899
Q ss_pred EEECCccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccccccccc
Q 000838 764 IKISGYPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVG 838 (1262)
Q Consensus 764 i~~~g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~ 838 (1262)
|.++|.+... ...++.++|++|++.+++ .|+.||+.+..... .....+..++++.++++.+++.+..+....
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987632 134567999999988887 69999998864322 111233445567889999998642211111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 839 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 839 ~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
..+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||++. ++.+.+|++.
T Consensus 159 -~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~ 233 (267)
T PRK14237 159 -KSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTA 233 (267)
T ss_pred -CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEE
Confidence 1246899999999999999999999999999999999999999999999985 4799999999986 5677788753
No 286
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.6e-32 Score=293.17 Aligned_cols=179 Identities=50% Similarity=0.819 Sum_probs=152.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCC--CCCeeEEEEEECCc
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGSIKISGY 769 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~--~~~~~~G~i~~~g~ 769 (1262)
.+.++|+++.++... ....+.+++|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 477899988874210 001246999999999999999999999999999999999987 5 46899999998
Q ss_pred cCCcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000838 770 PKKHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 770 ~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGq 849 (1262)
+......++.++|++|++.+++.+|+.||+.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8654445678999999999889999999997642100 499999
Q ss_pred HHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 850 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 850 rqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++|+|+|+++|++..++.+.+|+++
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~ 183 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLL 183 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEE
Confidence 9999999999999999999999999999999999999999877799999999999767777888753
No 287
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.5e-33 Score=306.03 Aligned_cols=191 Identities=23% Similarity=0.349 Sum_probs=156.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc--ccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV--PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~--~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... ..+.++|++|++.+++.+|++||+.+....++..
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~ 105 (236)
T TIGR03864 29 FVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALHGLS 105 (236)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhcCCC
Confidence 47999999999999999999999988 999999998875432 1247999999988888999999998765432110
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
..+..+.++++++.+||++..++ .+..||||||||++||||
T Consensus 106 ----------------------------------~~~~~~~~~~~l~~~gl~~~~~~-----~~~~LS~G~~qrl~lara 146 (236)
T TIGR03864 106 ----------------------------------RAEARERIAALLARLGLAERADD-----KVRELNGGHRRRVEIARA 146 (236)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCChhhhcC-----ChhhCCHHHHHHHHHHHH
Confidence 00112345678899999877664 445799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|+.+|++++|||||+|||+.++..+.+.|+++++.. +.++++++|+.+++.. ||++++|++|++++.|+++++.+
T Consensus 147 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 147 LLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQ-GLSVLWATHLVDEIEA-DDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecChhhHhh-CCEEEEEeCCeEEEeCCHHHHHH
Confidence 999999999999999999999999999999875433 4567778899888864 99999999999999998876643
No 288
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-33 Score=316.34 Aligned_cols=190 Identities=19% Similarity=0.283 Sum_probs=156.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-------cccceEEeecccc--CCCCCCCHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-------VPQRTAAYISQHD--NHIGEMTVRETLAFS 71 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~--~~~~~lTv~e~l~f~ 71 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+|||+|++ .+++ .||.||+.|+
T Consensus 35 ~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~ 110 (286)
T PRK13646 35 YYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFG 110 (286)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhh
Confidence 47999999999999999999999998 99999999987532 1246799999985 3444 5999999986
Q ss_pred HhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-ccccccccCCcccccccccc
Q 000838 72 ARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVGDEMIRGISGGQK 150 (1262)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqk 150 (1262)
....+.. ..+..++++++++.+||. +..+ ..+..||||||
T Consensus 111 ~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~~LSgGq~ 151 (286)
T PRK13646 111 PKNFKMN----------------------------------LDEVKNYAHRLLMDLGFSRDVMS-----QSPFQMSGGQM 151 (286)
T ss_pred HHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhh-----CCcccCCHHHH
Confidence 5422110 011233467789999996 5555 45668999999
Q ss_pred hhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 151 KRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 151 qRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
||++|||||+.+|++++|||||+|||+.++.++.+.|+++.+. .+++|++++|+.+++.+.|||+++|++|++++.|++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987543 356777799999999999999999999999999998
Q ss_pred chHH
Q 000838 231 ELVL 234 (1262)
Q Consensus 231 ~~~~ 234 (1262)
+++.
T Consensus 231 ~~~~ 234 (286)
T PRK13646 231 KELF 234 (286)
T ss_pred HHHH
Confidence 8764
No 289
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.7e-32 Score=302.93 Aligned_cols=198 Identities=28% Similarity=0.400 Sum_probs=165.5
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ .+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 4677777663 2469999999999999999999999999999999999876 458999999987643
Q ss_pred c-cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000838 774 E-TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKR 852 (1262)
Q Consensus 774 ~-~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr 852 (1262)
. ..++.++|++|++.+++.+|+.||+.+....+. .......+.++++++.+++.+..++.. ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 234679999999999999999999987654321 222333456788999999987777653 4799999999
Q ss_pred HHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 853 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 853 l~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+..|++
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i 201 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRI 201 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEE
Confidence 99999999999999999999999999999999999998765 899999999975 456677875
No 290
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-32 Score=338.52 Aligned_cols=206 Identities=22% Similarity=0.275 Sum_probs=170.0
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..++++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 477889988763 3469999999999999999999999999999999999876433589999999876
Q ss_pred Ccc----cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 772 KHE----TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~~----~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
... ..++.+||++|++.+++.+||+||+.+....+.....+.+..+++++++++.+++.+..++.+ .+|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 421 234669999999989999999999988643321111123344556889999999987777664 47999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||++|||||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||++. .+.+..|+++
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~ 214 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTIC 214 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEE
Confidence 9999999999999999999999999999999999999999999877999999999975 4556677743
No 291
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=5.7e-33 Score=305.15 Aligned_cols=189 Identities=24% Similarity=0.288 Sum_probs=154.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+.++.......
T Consensus 13 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-- 85 (230)
T TIGR01184 13 FISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENIALAVDRVLPD-- 85 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHHHHHHHhcccC--
Confidence 47999999999999999999999988 9999999998764322 2489999998999999999998863210000
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
. ...+.+++++++++.+||++..++ .+..||||||||++|||||+
T Consensus 86 ~------------------------------~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrv~la~al~ 130 (230)
T TIGR01184 86 L------------------------------SKSERRAIVEEHIALVGLTEAADK-----RPGQLSGGMKQRVAIARALS 130 (230)
T ss_pred C------------------------------CHHHHHHHHHHHHHHcCCHHHHcC-----ChhhCCHHHHHHHHHHHHHH
Confidence 0 000112346778999999877664 45679999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcch
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPREL 232 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~ 232 (1262)
.+|++++|||||+|||+.++..+.+.|+++++. .+.+|++++|+.+++.+.||++++|++|+++..|+..+
T Consensus 131 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 201 (230)
T TIGR01184 131 IRPKVLLLDEPFGALDALTRGNLQEELMQIWEE-HRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILE 201 (230)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCcee
Confidence 999999999999999999999999999987543 34567778999999999999999999999998886554
No 292
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=305.27 Aligned_cols=196 Identities=28% Similarity=0.375 Sum_probs=161.6
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 467888887763 2469999999999999999999999999999999999876 4589999999875
Q ss_pred Cc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000838 772 KH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSg 847 (1262)
.. ...++.++|++|++.+++ .|+.||+.+....+ . . .+.+++++++.+++. +..++. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~-~---~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G-E---KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C-c---HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999988876 69999998753321 1 1 123477899999996 455554 457999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+..|+++
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~ 203 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTA 203 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEE
Confidence 9999999999999999999999999999999999999999998764 899999999975 4566778753
No 293
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-32 Score=304.71 Aligned_cols=207 Identities=21% Similarity=0.261 Sum_probs=164.9
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--CC-eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~~~g 768 (1262)
.+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 577899988763 2469999999999999999999999999999999999864 21 2579999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 843 (1262)
.++.. ...++.++|++|++.+++.+|+.||+.+...... ..+..+.+++++++++.+++.+....... ..+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcC
Confidence 87532 2346779999999999999999999987643321 11223334567889999998642111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||++. ++.+.+|+++
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~ 218 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTA 218 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEE
Confidence 7999999999999999999999999999999999999999999999975 689999999975 4567788753
No 294
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-33 Score=301.49 Aligned_cols=183 Identities=27% Similarity=0.417 Sum_probs=152.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-------cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-------VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|++||+.+...
T Consensus 25 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~ 101 (214)
T cd03297 25 VTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNVRENLAFGLK 101 (214)
T ss_pred eEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCHHHHHHHHHh
Confidence 47999999999999999999999988 99999999886421 124579999999988889999999987642
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
... + ...+++++++++.+||++..+ +.+..||||||||+
T Consensus 102 ~~~-----~-------------------------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv 140 (214)
T cd03297 102 RKR-----N-------------------------------REDRISVDELLDLLGLDHLLN-----RYPAQLSGGEKQRV 140 (214)
T ss_pred hCC-----H-------------------------------HHHHHHHHHHHHHcCCHhHhh-----cCcccCCHHHHHHH
Confidence 110 0 001224567899999987665 44567999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|++++|+.+++...||++++|++|++++.|
T Consensus 141 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 141 ALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNL-NIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999876432 456777899999999999999999999998765
No 295
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-32 Score=304.54 Aligned_cols=205 Identities=20% Similarity=0.259 Sum_probs=161.4
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC-CeeEEEEEECCccC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGSIKISGYPK 771 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~-~~~~G~i~~~g~~~ 771 (1262)
+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 45778887763 24699999999999999999999999999999999997532 24689999999876
Q ss_pred Cc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 772 KH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
.. ...++.++|++|++.+++ .|++||+.+....+.... .....+++++++++.+++.+...... ...+..||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKL-KQNALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHh-cCCcccCCHH
Confidence 42 234567999999998887 699999988654332111 12233455788999999953211111 1124579999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ |+|+|++||+++ ++.+..|+.
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i 211 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYT 211 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEE
Confidence 99999999999999999999999999999999999999999864 899999999975 455667764
No 296
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-33 Score=347.86 Aligned_cols=192 Identities=24% Similarity=0.420 Sum_probs=158.6
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc---cceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 2 TLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 2 ~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+||||||||||||.+.+|-+.++|+ +|.|.+||.|+++.+. |+++|.|.|||.+| +.|+||||.||.+ + .
T Consensus 1019 vALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF-~~TIrENI~YG~~-~-v- 1091 (1228)
T KOG0055|consen 1019 VALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLF-NGTIRENIAYGSE-E-V- 1091 (1228)
T ss_pred EEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccCchhh-cccHHHHHhccCC-C-C-
Confidence 7999999999999999999999998 9999999999988765 57899999999887 5699999999821 1 1
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
..+.+.++++ .++.-=-..+|++.+||.||++.. +||||||||++||||
T Consensus 1092 -s~~eIi~Aak-----------------------------~ANaH~FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARA 1140 (1228)
T KOG0055|consen 1092 -SEEEIIEAAK-----------------------------LANAHNFISSLPQGYDTRVGERGV-QLSGGQKQRIAIARA 1140 (1228)
T ss_pred -CHHHHHHHHH-----------------------------HhhhHHHHhcCcCcccCccCcccC-cCCchHHHHHHHHHH
Confidence 1111222211 122223356799999999997655 799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
++.||+||||||.||+||+++.+-|.+.|.+.. .++|+|+ +.| +....+.||.|+|+++|+|+++|+++++.+
T Consensus 1141 ilRnPkILLLDEATSALDseSErvVQeALd~a~--~gRT~Iv-IAH-RLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1141 ILRNPKILLLDEATSALDSESERVVQEALDRAM--EGRTTIV-IAH-RLSTIQNADVIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred HHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh--cCCcEEE-Eec-chhhhhcCCEEEEEECCEEEecccHHHHHh
Confidence 999999999999999999999999999998853 4667666 445 455778999999999999999999999875
No 297
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-33 Score=317.66 Aligned_cols=192 Identities=17% Similarity=0.194 Sum_probs=160.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeecccc--CCCCCCCHHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHD--NHIGEMTVRETLAFSA 72 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1262)
+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.... .++.++||+|++ .+.|.+||.+++.+..
T Consensus 43 ~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~ 119 (327)
T PRK11308 43 TLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPL 119 (327)
T ss_pred EEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHH
Confidence 47999999999999999999999987 999999999876432 245799999997 5888999999998765
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcc-cccccccCCcccccccccch
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDN-CADILVGDEMIRGISGGQKK 151 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqkq 151 (1262)
..... . ...+.++++.++++.+||.+ .++ ++++.|||||||
T Consensus 120 ~~~~~-~--------------------------------~~~~~~~~~~~~l~~~gL~~~~~~-----~~p~~LSgGq~Q 161 (327)
T PRK11308 120 LINTS-L--------------------------------SAAERREKALAMMAKVGLRPEHYD-----RYPHMFSGGQRQ 161 (327)
T ss_pred HHccC-C--------------------------------CHHHHHHHHHHHHHHCCCChHHhc-----CCCccCCHHHHH
Confidence 43210 0 00112345778899999963 455 566789999999
Q ss_pred hhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 152 RVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 152 RvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
||+|||||+.+|++|++||||+|||..++.++++.|+++.+. .+++++++||+...+.+.||+|++|++|++++.|+.+
T Consensus 162 Rv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~ 240 (327)
T PRK11308 162 RIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKE 240 (327)
T ss_pred HHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999987543 3567778999999999999999999999999999988
Q ss_pred hHH
Q 000838 232 LVL 234 (1262)
Q Consensus 232 ~~~ 234 (1262)
++.
T Consensus 241 ~~~ 243 (327)
T PRK11308 241 QIF 243 (327)
T ss_pred HHh
Confidence 775
No 298
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=7.4e-33 Score=318.15 Aligned_cols=199 Identities=21% Similarity=0.221 Sum_probs=162.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-------cceEEeecccc--CCCCCCCHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-------QRTAAYISQHD--NHIGEMTVRETLAFS 71 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~--~~~~~lTv~e~l~f~ 71 (1262)
+++|+|+||||||||+++|+|+++|+...+|+|.++|.++..... ++.++||+|++ .+.|.+|+.+++.+.
T Consensus 44 ~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~ 123 (330)
T PRK09473 44 TLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEV 123 (330)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHH
Confidence 479999999999999999999998742238999999998865321 24799999997 688999999999876
Q ss_pred HhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccch
Q 000838 72 ARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKK 151 (1262)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkq 151 (1262)
...+.. . ...+..+++.++++.+||++..+. . ++++++|||||||
T Consensus 124 ~~~~~~-~--------------------------------~~~~~~~~~~~~L~~vgL~~~~~~-~-~~~p~~LSgG~~Q 168 (330)
T PRK09473 124 LMLHKG-M--------------------------------SKAEAFEESVRMLDAVKMPEARKR-M-KMYPHEFSGGMRQ 168 (330)
T ss_pred HHHhcC-C--------------------------------CHHHHHHHHHHHHHHcCCCChHHH-h-cCCcccCCHHHHH
Confidence 533210 0 001123456778999999764332 2 3678899999999
Q ss_pred hhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 152 RVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 152 RvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
||+|||||+.+|+++++||||+|||+.++.++++.|+++.+. .++++++++|+...+.+++|+|++|++|++++.|+++
T Consensus 169 Rv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~ 247 (330)
T PRK09473 169 RVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNAR 247 (330)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999987653 3567788999999999999999999999999999998
Q ss_pred hHHH
Q 000838 232 LVLE 235 (1262)
Q Consensus 232 ~~~~ 235 (1262)
++.+
T Consensus 248 ~i~~ 251 (330)
T PRK09473 248 DVFY 251 (330)
T ss_pred HHHh
Confidence 8753
No 299
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-32 Score=307.53 Aligned_cols=201 Identities=23% Similarity=0.261 Sum_probs=162.4
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEC
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSIKIS 767 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~~~ 767 (1262)
..+.++|+++.++ .+.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 4688999988773 24699999999999999999999999999999999997542 1358999999
Q ss_pred CccCC-----cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000838 768 GYPKK-----HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVG 838 (1262)
Q Consensus 768 g~~~~-----~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~ 838 (1262)
|.+.. ...+++.++|++|++.+++ .||+||+.+....+. ... ..++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 98753 1234567999999998887 499999988654331 111 23345677888888743 23332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 839 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 839 ~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+.+|+.+
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~ 224 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTA 224 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEE
Confidence 457999999999999999999999999999999999999999999999854 789999999975 5667788753
No 300
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.9e-32 Score=313.25 Aligned_cols=210 Identities=20% Similarity=0.281 Sum_probs=168.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEECCcc
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSIKISGYP 770 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~ 770 (1262)
.+.++|++..+... .+...+++||||+|++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 57899998877421 12356999999999999999999999999999999999987631 138999999987
Q ss_pred CCc---cc---c-cceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000838 771 KKH---ET---F-ARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPG 841 (1262)
Q Consensus 771 ~~~---~~---~-~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 841 (1262)
+.. .. + ++.++||+|++ .+.|.+|+.+++........ ..+.++..+++.++++.+||.+..+.. . ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 632 11 2 24799999998 67889999999987654432 234455556788999999997533221 1 23
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 842 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 842 ~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+.+||||||||++|||||+.+|++|++||||+|||+.++..+++.|+++.++ |.|+|++|||+. .+.+..|++
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri 232 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKV 232 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEE
Confidence 5689999999999999999999999999999999999999999999999765 899999999986 455677874
No 301
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-32 Score=308.01 Aligned_cols=205 Identities=25% Similarity=0.341 Sum_probs=163.6
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC------eeEEEEEE
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGSIKI 766 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~------~~~G~i~~ 766 (1262)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 46788887663 346999999999999999999999999999999999986532 12799999
Q ss_pred CCccCCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000838 767 SGYPKKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLA-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGV 842 (1262)
Q Consensus 767 ~g~~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 842 (1262)
+|.+... ..+++.++|++|++..++.+|+.||+.+....... ......+.++.++++++.+|+.+..++. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987532 23455689999998766679999999875321110 0111123345678899999998776655 3
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHh
Q 000838 843 NGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESF 912 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~---------~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~f 912 (1262)
..||||||||++|||||+ .+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999999776 899999999975 466678
Q ss_pred hhhc
Q 000838 913 DEAI 916 (1262)
Q Consensus 913 d~~~ 916 (1262)
|+.+
T Consensus 223 d~i~ 226 (272)
T PRK13547 223 DRIA 226 (272)
T ss_pred CEEE
Confidence 8753
No 302
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=7.4e-33 Score=309.19 Aligned_cols=190 Identities=22% Similarity=0.330 Sum_probs=157.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-----------cccceEEeeccccCCCCCCCHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-----------VPQRTAAYISQHDNHIGEMTVRETLA 69 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-----------~~~~~~~yv~Q~~~~~~~lTv~e~l~ 69 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~ 107 (250)
T PRK11264 31 VVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENII 107 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHH
Confidence 47999999999999999999999988 99999999887532 12457999999998888899999998
Q ss_pred HHHhc-cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccc
Q 000838 70 FSARC-QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGG 148 (1262)
Q Consensus 70 f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGG 148 (1262)
++... ++. . .++..+.+.++++.+||++..| ..+++||||
T Consensus 108 ~~~~~~~~~--~--------------------------------~~~~~~~~~~~l~~~gl~~~~~-----~~~~~LS~G 148 (250)
T PRK11264 108 EGPVIVKGE--P--------------------------------KEEATARARELLAKVGLAGKET-----SYPRRLSGG 148 (250)
T ss_pred HHHHHhcCC--C--------------------------------HHHHHHHHHHHHHHcCCcchhh-----CChhhCChH
Confidence 85421 110 0 0012234667889999987665 445689999
Q ss_pred cchhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 149 QKKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 149 qkqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
|||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++.++||++++|++|++++.|
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 226 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDVADRAIFMDQGRIVEQG 226 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999998753 3 456677899999999999999999999999999
Q ss_pred CcchHH
Q 000838 229 PRELVL 234 (1262)
Q Consensus 229 ~~~~~~ 234 (1262)
+++++.
T Consensus 227 ~~~~~~ 232 (250)
T PRK11264 227 PAKALF 232 (250)
T ss_pred CHHHHh
Confidence 987653
No 303
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7e-33 Score=307.27 Aligned_cols=190 Identities=19% Similarity=0.335 Sum_probs=157.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHhc-
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSARC- 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~- 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++...
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~ 105 (240)
T PRK09493 29 VVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRV 105 (240)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHh
Confidence 47999999999999999999999988 99999999987542 1245799999999888899999999885421
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.+.. ..+..+.+.++++.+||++..+ +.++.||||||||++
T Consensus 106 ~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~-----~~~~~LS~G~~qrv~ 146 (240)
T PRK09493 106 RGAS----------------------------------KEEAEKQARELLAKVGLAERAH-----HYPSELSGGQQQRVA 146 (240)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCChHHHh-----cChhhcCHHHHHHHH
Confidence 1100 0011234677899999987666 445679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++...||++++|++|++++.|+.+++.
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 147 IARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-E-GMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLI 224 (240)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHh
Confidence 99999999999999999999999999999999998643 3 456777899999999999999999999999999887653
No 304
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.9e-32 Score=319.04 Aligned_cols=180 Identities=24% Similarity=0.356 Sum_probs=155.1
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEecCCCCCCCCCCH
Q 000838 723 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH-------ETFARISGYCEQNDIHSPFVTV 795 (1262)
Q Consensus 723 ~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~~lTv 795 (1262)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999876 458999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCC
Q 000838 796 HESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 875 (1262)
Q Consensus 796 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgL 875 (1262)
+||+.|+.... ...+.+++++++++.+||.+..++.+ .+||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 12234456889999999988777764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 876 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 876 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|+.++..+.+.|++++++ |+|||++||++. ++....|++
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i 202 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRV 202 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEE
Confidence 999999999999999865 899999999985 566778874
No 305
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=310.85 Aligned_cols=190 Identities=25% Similarity=0.356 Sum_probs=157.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeecccc-CCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHD-NHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~-~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++ ..++..||.||+.++....+
T Consensus 35 ~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~ 111 (279)
T PRK13635 35 WVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENIG 111 (279)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhCC
Confidence 47999999999999999999999998 999999999886432 245799999997 36777899999998654321
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. ..+.+++++++++.+||++..++ .+..|||||||||+||
T Consensus 112 ~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~LS~G~~qrv~la 152 (279)
T PRK13635 112 VP----------------------------------REEMVERVDQALRQVGMEDFLNR-----EPHRLSGGQKQRVAIA 152 (279)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHcCChhhhhC-----CcccCCHHHHHHHHHH
Confidence 10 01123346788999999887764 4557999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||+.+|++++|||||+|||+.++..+++.|+++++ ..+++|++++|+.+++. .||++++|++|++++.|+.+++.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~~~~tilivsH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKE-QKGITVLSITHDLDEAA-QADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCCEEEEEecCHHHHH-cCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999998754 33566777889988886 59999999999999999987764
No 306
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-32 Score=306.98 Aligned_cols=186 Identities=25% Similarity=0.354 Sum_probs=154.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++... .+.++|++|++.+++.+||+||+.++...++..
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~-- 101 (255)
T PRK11248 29 LLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQDNVAFGLQLAGVE-- 101 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHHHHHHhHHHHcCCC--
Confidence 47999999999999999999999988 99999999987542 245899999998888899999998865322110
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
..+..++++++++.+||.+..+ +.+..||||||||++|||||+
T Consensus 102 --------------------------------~~~~~~~~~~~l~~~gl~~~~~-----~~~~~LSgGq~qrl~laral~ 144 (255)
T PRK11248 102 --------------------------------KMQRLEIAHQMLKKVGLEGAEK-----RYIWQLSGGQRQRVGIARALA 144 (255)
T ss_pred --------------------------------HHHHHHHHHHHHHHcCChhHhh-----CChhhCCHHHHHHHHHHHHHh
Confidence 0011234677899999987665 345679999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEec--CCeEEEecCcc
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLS--DGQIVYQGPRE 231 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~--~G~i~~~G~~~ 231 (1262)
.+|++++|||||+|||+.++..+.+.|+++.+.. +++|++++|+.+++...||++++|+ +|+++..++.+
T Consensus 145 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 145 ANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 9999999999999999999999999999864433 4566778999999999999999998 59999887754
No 307
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.1e-32 Score=299.73 Aligned_cols=196 Identities=23% Similarity=0.337 Sum_probs=160.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 578899987763 2469999999999999999999999999999999999866 4589999999865
Q ss_pred Cc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000838 772 KH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSg 847 (1262)
.. ..+++.++|++|++.+++ .|+.||+.+....+.. .. .++.++++++.+++. ...++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 234567899999988887 5999999875443221 11 123467899999996 345554 457999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++ |.|||++||++.. + +..|+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i 207 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKV 207 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEE
Confidence 9999999999999999999999999999999999999999998764 8999999999863 3 456664
No 308
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=7.5e-33 Score=301.79 Aligned_cols=180 Identities=24% Similarity=0.367 Sum_probs=149.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~ 105 (214)
T cd03292 29 FVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEV 105 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999988 999999999875432 245799999999899999999999986543
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
++.. .++.+++++++++.+||++..++ .+.+||||||||++
T Consensus 106 ~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~ 146 (214)
T cd03292 106 TGVP----------------------------------PREIRKRVPAALELVGLSHKHRA-----LPAELSGGEQQRVA 146 (214)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhC-----ChhhcCHHHHHHHH
Confidence 2110 00112345678999999876664 45679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeE
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQI 224 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i 224 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++.+.||++++|++|++
T Consensus 147 laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 147 IARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999998643 3 45677789999999999999999999974
No 309
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-32 Score=300.83 Aligned_cols=186 Identities=27% Similarity=0.377 Sum_probs=158.0
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEecCCCCCCCCCCHHHH
Q 000838 720 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH-ETFARISGYCEQNDIHSPFVTVHES 798 (1262)
Q Consensus 720 il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~lTv~e~ 798 (1262)
+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999876 458999999987643 1234679999999999999999999
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHH
Q 000838 799 LAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 878 (1262)
Q Consensus 799 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~ 878 (1262)
+.+..... .....+.++.+.++++.+||.+..++.+ ..||||||||++|||||+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223344456788999999988777664 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 879 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 879 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
++..+.+.|++++++ |+|+|++||++. ++.+.+|+.+
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~ 201 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVA 201 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEE
Confidence 999999999998765 899999999975 4566778753
No 310
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-32 Score=318.00 Aligned_cols=176 Identities=23% Similarity=0.353 Sum_probs=153.4
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEecCCCCCCCCCCH
Q 000838 723 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH-------ETFARISGYCEQNDIHSPFVTV 795 (1262)
Q Consensus 723 ~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~~lTv 795 (1262)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|+..++|.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 458999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCC
Q 000838 796 HESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 875 (1262)
Q Consensus 796 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgL 875 (1262)
+||+.|... ...+++++++++.+||.+..++.+ .+||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988532 112345789999999988777764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 876 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 876 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|+.++..+.+.|+++.++ |+|+|++||++. ++....|++
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i 199 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRV 199 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEE
Confidence 999999999999999765 899999999985 677788874
No 311
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-33 Score=318.42 Aligned_cols=191 Identities=23% Similarity=0.363 Sum_probs=155.3
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 2 TLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 2 ~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
+||+|+|||||||+||+|.++.+ . +|+|.+||.++.+.. .|+.||||||+..+| +.||.+||.+|..-
T Consensus 381 VaIvG~nGsGKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~s---- 451 (591)
T KOG0057|consen 381 VAIVGSNGSGKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGNPS---- 451 (591)
T ss_pred EEEECCCCCCHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCCCC----
Confidence 79999999999999999999998 4 899999999986554 367899999988666 56999999997532
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
..++.+.+.|++... .+ -...+++.++|.||+++ ..|||||||||+||||
T Consensus 452 as~eeV~e~~k~a~~---------------------------hd--~i~~l~~GY~T~VGerG-~~LSGGekQrvslaRa 501 (591)
T KOG0057|consen 452 ASDEEVVEACKRAGL---------------------------HD--VISRLPDGYQTLVGERG-LMLSGGEKQRVSLARA 501 (591)
T ss_pred cCHHHHHHHHHHcCc---------------------------HH--HHHhccccchhhHhhcc-cccccchHHHHHHHHH
Confidence 234444444443211 11 13458899999999754 4699999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
++.||+|+++|||||+||+++.+++++.+.+. ..++|+| ++-|+. .....||+|++|++|++.+.|++++++.
T Consensus 502 ~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI-~IvH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 502 FLKDAPILLLDEATSALDSETEREILDMIMDV--MSGRTVI-MIVHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred HhcCCCeEEecCcccccchhhHHHHHHHHHHh--cCCCeEE-EEEecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999999999999873 3445554 566654 4667899999999999999999999875
No 312
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-32 Score=313.56 Aligned_cols=209 Identities=17% Similarity=0.193 Sum_probs=164.9
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--CeeEEEEEECCc
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGSIKISGY 769 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~--~~~~G~i~~~g~ 769 (1262)
.+.++|+++.+... .+...+|+||||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 36788998887431 1235699999999999999999999999999999999997642 246899999998
Q ss_pred cCCc---cc----ccceEEEecCCCC--CCCCCCHHHHHHHHHHhhcCCC---CCHHHHHHHHHHHHHHcCCccc---cc
Q 000838 770 PKKH---ET----FARISGYCEQNDI--HSPFVTVHESLAFSAWLRLAPE---VDSETRKMFIEEIMELVELNPL---RQ 834 (1262)
Q Consensus 770 ~~~~---~~----~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~---~~ 834 (1262)
++.. .. +++.++||+|++. +.|.+||.+++........... ....+.++++.++++.+||.+. .+
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 7532 11 2357999999975 5788999999976432111000 1112345568899999999753 23
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhh
Q 000838 835 SLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFD 913 (1262)
Q Consensus 835 ~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd 913 (1262)
.. +.+|||||||||+|||||+.+|++|++||||+|||+.++..+.+.|+++.++ |.|||++|||.+ .+.+..|
T Consensus 154 ~~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~d 227 (330)
T PRK15093 154 SF-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWAD 227 (330)
T ss_pred CC-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCC
Confidence 33 4589999999999999999999999999999999999999999999999875 999999999975 4556778
Q ss_pred hh
Q 000838 914 EA 915 (1262)
Q Consensus 914 ~~ 915 (1262)
++
T Consensus 228 ri 229 (330)
T PRK15093 228 KI 229 (330)
T ss_pred EE
Confidence 74
No 313
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-32 Score=297.50 Aligned_cols=179 Identities=25% Similarity=0.355 Sum_probs=151.1
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEecCCCCCCCCCCH
Q 000838 723 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH-------ETFARISGYCEQNDIHSPFVTV 795 (1262)
Q Consensus 723 ~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~~lTv 795 (1262)
|+|+++++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999876 458999999976531 1235679999999999989999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCC
Q 000838 796 HESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 875 (1262)
Q Consensus 796 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgL 875 (1262)
.||+.+..... .....+++++++++.+|+.+..+.. +..||||||||++||+||+.+|++++|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 2233445678899999998766665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 876 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 876 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|+.+++.+.+.|++++++ |+|||++||++. ++.+..|++
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i 202 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRI 202 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEE
Confidence 999999999999999765 899999999975 355566764
No 314
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-32 Score=311.11 Aligned_cols=206 Identities=21% Similarity=0.304 Sum_probs=164.0
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++... .....+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 578999998774210 001358999999999999999999999999999999999876 4589999999875
Q ss_pred C--------cccccceEEEecCCCCC-CCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000838 772 K--------HETFARISGYCEQNDIH-SPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPG 841 (1262)
Q Consensus 772 ~--------~~~~~~~~~~v~q~~~~-~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~ 841 (1262)
. ...+++.++|++|++.. +...|++||+.+..... ....+...+.++++++.++|. +..++.
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 2 12345679999999742 22369999998864321 123334445678899999994 555654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 842 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 842 ~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||++. ++.+.+|+++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~ 222 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVI 222 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEE
Confidence 3579999999999999999999999999999999999999999999998764 899999999975 5667788753
No 315
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-32 Score=306.66 Aligned_cols=180 Identities=21% Similarity=0.298 Sum_probs=152.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+||+.++.. . .
T Consensus 40 ~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~enl~~~~~--~---~ 109 (257)
T PRK11247 40 FVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVIDNVGLGLK--G---Q 109 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHHHHHhccc--c---h
Confidence 47999999999999999999999988 9999999977642 24579999999988888999999987421 0 0
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
.+.+++++++.+||.+..+ +.+..||||||||++|||+|+
T Consensus 110 -----------------------------------~~~~~~~~l~~~gl~~~~~-----~~~~~LSgGqkqrl~laraL~ 149 (257)
T PRK11247 110 -----------------------------------WRDAALQALAAVGLADRAN-----EWPAALSGGQKQRVALARALI 149 (257)
T ss_pred -----------------------------------HHHHHHHHHHHcCChhHhc-----CChhhCCHHHHHHHHHHHHHh
Confidence 0123566789999987665 445689999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
.+|+++||||||+|||+.++..+.+.|+++.+.. +.+|++++|+.+++.+.||++++|++|++++.|+.+
T Consensus 150 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 150 HRPGLLLLDEPLGALDALTRIEMQDLIESLWQQH-GFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999999999865433 456677899999999999999999999999988754
No 316
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-32 Score=306.53 Aligned_cols=202 Identities=25% Similarity=0.298 Sum_probs=166.3
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.+.. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~ 72 (269)
T PRK13648 6 SIIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQA 72 (269)
T ss_pred ceEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 35788999887631 12358999999999999999999999999999999999876 458999999987
Q ss_pred CCc---ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 771 KKH---ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
... ...++.++|++|++. +++..|+.+|+.+..... ....+..++.++++++.+++.+..+.. +..||
T Consensus 73 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 144 (269)
T PRK13648 73 ITDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALS 144 (269)
T ss_pred CCcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCC
Confidence 532 234567999999974 677789999998864322 123344455678899999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+|||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||++.. +. ..|++
T Consensus 145 ~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~-~~-~~d~i 212 (269)
T PRK13648 145 GGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSE-AM-EADHV 212 (269)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchH-Hh-cCCEE
Confidence 99999999999999999999999999999999999999999998765 8999999999863 43 37774
No 317
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=4.5e-32 Score=297.60 Aligned_cols=207 Identities=23% Similarity=0.268 Sum_probs=161.7
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECC--c-
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISG--Y- 769 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g--~- 769 (1262)
+.++|+++.+..... ....+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++| .
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCc
Confidence 457888877742100 0012469999999999999999999999999999999999876 3579999984 2
Q ss_pred -cCCc---cc----ccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCC
Q 000838 770 -PKKH---ET----FARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-RQSLVGLP 840 (1262)
Q Consensus 770 -~~~~---~~----~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~ 840 (1262)
+... .. .++.++|++|++.+++.+|+.|++.+..... ....+..++.+.++++.+|+.+. .+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 3211 11 2356899999999999999999998754322 12333344567889999999753 3443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+.+||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||++. .+....|+.+
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~ 220 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVM 220 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeE
Confidence 4579999999999999999999999999999999999999999999999877999999999953 3445666543
No 318
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.5e-32 Score=306.96 Aligned_cols=211 Identities=20% Similarity=0.248 Sum_probs=166.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++++..+.. ....+.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 77 (267)
T PRK15112 4 LLEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPL 77 (267)
T ss_pred eEEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 3678999987742110 000012469999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEecCCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCC
Q 000838 772 KH---ETFARISGYCEQNDI--HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVNGL 845 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~l 845 (1262)
.. ...++.++|++|++. +.+.+|+.|++.+...... .......++.++++++.+|+. +..+.. +..|
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~L 150 (267)
T PRK15112 78 HFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHML 150 (267)
T ss_pred CCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhc
Confidence 42 123456999999975 5677899999987654321 123334445688999999994 455544 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 846 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 846 SgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++...+|+++
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~ 221 (267)
T PRK15112 151 APGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVL 221 (267)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEE
Confidence 999999999999999999999999999999999999999999999765 899999999975 5666778753
No 319
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=311.60 Aligned_cols=191 Identities=24% Similarity=0.333 Sum_probs=157.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCC--C---cccceEEeeccccC-CCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGE--F---VPQRTAAYISQHDN-HIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~--~---~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++. .+...||+||+.++...
T Consensus 34 ~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 110 (283)
T PRK13636 34 VTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVN 110 (283)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHH
Confidence 47999999999999999999999988 9999999998741 1 12457999999863 34567999999886532
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.+.. ..+..++++++++.+||.+..+ +.++.||||||||++
T Consensus 111 ~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~-----~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 111 LKLP----------------------------------EDEVRKRVDNALKRTGIEHLKD-----KPTHCLSFGQKKRVA 151 (283)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHCCChhhhh-----CCcccCCHHHHHHHH
Confidence 2110 0111234677899999988766 456679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++...|||+++|++|++++.|+++++.
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999987643 2456777899999999999999999999999999988765
No 320
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1e-32 Score=302.21 Aligned_cols=181 Identities=22% Similarity=0.339 Sum_probs=147.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-------cceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-------QRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.+...
T Consensus 33 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~ 109 (221)
T TIGR02211 33 IVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLL 109 (221)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999988 9999999998754321 2469999999888889999999998653
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.+... ..+..+.+.++++.+||++..+ +.+..|||||||||
T Consensus 110 ~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv 150 (221)
T TIGR02211 110 IGKKS----------------------------------VKEAKERAYEMLEKVGLEHRIN-----HRPSELSGGERQRV 150 (221)
T ss_pred hcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhh-----CChhhCCHHHHHHH
Confidence 22100 0011234567899999987666 44567999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEE
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIV 225 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~ 225 (1262)
+|||+|+.+|++++|||||+|||+.++..+.+.|+++++.. +.+|++++|+.+++. .+|++++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~-~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNREL-NTSFLVVTHDLELAK-KLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHh-hcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999875432 456677888888775 47999999999975
No 321
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1e-32 Score=300.61 Aligned_cols=179 Identities=26% Similarity=0.383 Sum_probs=149.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (214)
T TIGR02673 30 FLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEV 106 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999988 999999999876432 245799999999888899999999986543
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
++.. .++.++.++++++.+||++..++ .+..||||||||++
T Consensus 107 ~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~ 147 (214)
T TIGR02673 107 RGKK----------------------------------EREIQRRVGAALRQVGLEHKADA-----FPEQLSGGEQQRVA 147 (214)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHHHHHH
Confidence 2110 00112346778999999876653 44679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCe
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQ 223 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~ 223 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++..+||++++|++|+
T Consensus 148 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 148 IARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-R-GTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999998643 3 4567778999999999999999999985
No 322
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-32 Score=301.46 Aligned_cols=198 Identities=23% Similarity=0.287 Sum_probs=162.2
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++. + ..|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 467888887731 1 238999999999999999999999999999999876 45899999998754
Q ss_pred cc-cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000838 773 HE-TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRK 851 (1262)
Q Consensus 773 ~~-~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 851 (1262)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..+++++++++.+|+.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 21 22457999999999999999999998753211 111 1233456889999999988777764 479999999
Q ss_pred HHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 852 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 852 rl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|++||||++.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+.+
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~ 201 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSL 201 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999998764 899999999985 4556677753
No 323
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-32 Score=276.11 Aligned_cols=202 Identities=26% Similarity=0.390 Sum_probs=164.9
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
++.+|++|+.. ++.+|++||++++|||++||+||||||||||||.|+|...+ .+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 45678888874 46799999999999999999999999999999999998763 4899999999864
Q ss_pred c---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000838 773 H---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 773 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGq 849 (1262)
. ....+..+.+||+..+-...||+|-+.++..-... .....+..+.++++|...++.+.+... ...|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRD-----YRTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCchH
Confidence 3 34456678899998887678999999987533211 112223444578899999999887765 34799999
Q ss_pred HHHHHHHHHHhh------CCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 850 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 850 rqrl~ia~al~~------~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||.+||.|++ ++++|+||||||.||..-+..++++.|+++++|..|+++.||.+. .....|+.+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDriv 212 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIV 212 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheee
Confidence 999999999975 345889999999999999999999999999999999999999974 334566643
No 324
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-32 Score=308.40 Aligned_cols=206 Identities=22% Similarity=0.288 Sum_probs=167.1
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|++++++.... ...+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~~-------~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNEE-------STEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCCC-------CCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 4778999988742100 012469999999999999999999999999999999999876 4589999999876
Q ss_pred Cc----ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 772 KH----ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 772 ~~----~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
.. ...++.+||++|++. .+...|+.|++.|..... .....+.+++++++++.+||.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 42 234677999999974 233469999998865432 2233445566889999999988877764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||+++. +. ..|+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~~-~~d~v~ 215 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-AV-EADRII 215 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-Hh-cCCEEE
Confidence 99999999999999999999999999999999999999999999764 9999999999874 33 478753
No 325
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-32 Score=312.94 Aligned_cols=190 Identities=22% Similarity=0.339 Sum_probs=155.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-------cccceEEeeccccC-CCCCCCHHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-------VPQRTAAYISQHDN-HIGEMTVRETLAFSA 72 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~ 72 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .+..+||+||+.++.
T Consensus 35 ~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~ 111 (287)
T PRK13641 35 FVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGP 111 (287)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHH
Confidence 47999999999999999999999998 99999999987432 12357999999862 334689999999865
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-ccccccccCCcccccccccch
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVGDEMIRGISGGQKK 151 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkq 151 (1262)
...+.. .++..++++++++.+||. +..+ +.++.|||||||
T Consensus 112 ~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~~LSgGq~q 152 (287)
T PRK13641 112 KNFGFS----------------------------------EDEAKEKALKWLKKVGLSEDLIS-----KSPFELSGGQMR 152 (287)
T ss_pred HHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhHhh-----CCcccCCHHHHH
Confidence 422110 011223467789999996 5555 445679999999
Q ss_pred hhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 152 RVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 152 RvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
|++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++.+.||++++|++|++++.|+++
T Consensus 153 rl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 153 RVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-A-GHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998643 3 566777999999999999999999999999999988
Q ss_pred hHH
Q 000838 232 LVL 234 (1262)
Q Consensus 232 ~~~ 234 (1262)
++.
T Consensus 231 ~~~ 233 (287)
T PRK13641 231 EIF 233 (287)
T ss_pred HHh
Confidence 754
No 326
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-32 Score=303.23 Aligned_cols=191 Identities=20% Similarity=0.374 Sum_probs=158.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|+.||+.++.... .
T Consensus 27 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~-~-- 100 (232)
T PRK10771 27 RVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG-L-- 100 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhcccccc-c--
Confidence 47999999999999999999999988 999999999875432 2357999999998999999999998753210 0
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
.. ..+.+++++++++.+||++..+. .++.||||||||++||||+
T Consensus 101 ~~-------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~laral 144 (232)
T PRK10771 101 KL-------------------------------NAAQREKLHAIARQMGIEDLLAR-----LPGQLSGGQRQRVALARCL 144 (232)
T ss_pred CC-------------------------------CHHHHHHHHHHHHHcCcHHHHhC-----CcccCCHHHHHHHHHHHHH
Confidence 00 00112346778999999877764 4557999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
+.+|++++|||||+|||+.++..+.+.|+++.+.. ++++++++|+.+++.+.||++++|++|++++.|+.+++.
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~ 218 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELL 218 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999875432 456677899999999999999999999999999987664
No 327
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-32 Score=308.56 Aligned_cols=204 Identities=25% Similarity=0.279 Sum_probs=167.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCe-eEEEEEECCcc
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGSIKISGYP 770 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~-~~G~i~~~g~~ 770 (1262)
.+.++|+++.++. ..+.+++|+|+++++||+++|+||||||||||+++|+|..++.. .+|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 5778999887631 12358999999999999999999999999999999999876321 13999999987
Q ss_pred CCc---ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 771 KKH---ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
... ...++.+||++|++. .++..||.||+.|....+ ..+.++.+++++++++.+||.+..++. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 643 234567999999974 567799999998764322 234445556688999999998877765 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++.. + +.+|+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~ 214 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVL 214 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEE
Confidence 99999999999999999999999999999999999999999999765 8999999999864 3 5678753
No 328
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.9e-33 Score=320.22 Aligned_cols=199 Identities=26% Similarity=0.422 Sum_probs=165.6
Q ss_pred CcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc
Q 000838 690 PHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGY 769 (1262)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 769 (1262)
+..+..+|+++.++. ++++++|+|+++++|+.++|+|+||||||||+++|+|..+ +.+|+|.+||.
T Consensus 318 ~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng~ 383 (559)
T COG4988 318 PIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNGI 383 (559)
T ss_pred CceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCc
Confidence 445667799988752 2379999999999999999999999999999999999887 46899999998
Q ss_pred cCC---cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccc------cccCC
Q 000838 770 PKK---HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQS------LVGLP 840 (1262)
Q Consensus 770 ~~~---~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~------~~~~~ 840 (1262)
+.. ...+++.++||+|++.+++ -|++||+.++. .+.+ ++.+.++++..|+.+..+. .+|.
T Consensus 384 ~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige- 452 (559)
T COG4988 384 DLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE- 452 (559)
T ss_pred cccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc-
Confidence 754 4568899999999998876 69999998752 2222 2347788888888765544 3443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+.++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++|++++||++. .....|+++
T Consensus 453 ~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~ 525 (559)
T COG4988 453 GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIV 525 (559)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEE
Confidence 4678999999999999999999999999999999999999999999999986 599999999874 455666643
No 329
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.9e-32 Score=290.18 Aligned_cols=183 Identities=20% Similarity=0.275 Sum_probs=152.9
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++++. ++.+++ +|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~l~~-vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (195)
T PRK13541 2 LSLHQLQFNIE-------------QKNLFD-LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQ--PSSGNIYYKNCNIN 65 (195)
T ss_pred eEEEEeeEEEC-------------CcEEEE-EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCcccC
Confidence 46788887763 234555 999999999999999999999999999999876 45899999998764
Q ss_pred cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000838 773 HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKR 852 (1262)
Q Consensus 773 ~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr 852 (1262)
... ++.++|++|++..++.+|+.||+.+...... ..+.++++++.+++.+..++. ++.||||||||
T Consensus 66 ~~~-~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~--------~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~~r 131 (195)
T PRK13541 66 NIA-KPYCTYIGHNLGLKLEMTVFENLKFWSEIYN--------SAETLYAAIHYFKLHDLLDEK-----CYSLSSGMQKI 131 (195)
T ss_pred hhh-hhhEEeccCCcCCCccCCHHHHHHHHHHhcc--------cHHHHHHHHHHcCCHhhhccC-----hhhCCHHHHHH
Confidence 322 3458999999888888999999987543221 123467888999998776665 34799999999
Q ss_pred HHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000838 853 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 905 (1262)
Q Consensus 853 l~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 905 (1262)
++||||++.+|++++|||||+|||+.++..+.+.|++..++|+|+|+++|++.
T Consensus 132 l~la~al~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 184 (195)
T PRK13541 132 VAIARLIACQSDLWLLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLES 184 (195)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 99999999999999999999999999999999999877667899999999975
No 330
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-32 Score=315.65 Aligned_cols=198 Identities=20% Similarity=0.217 Sum_probs=159.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCC-ceeEEEEECCccCCCCcc-------cceEEeecccc--CCCCCCCHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSL-KVSGRVTYNGHNMGEFVP-------QRTAAYISQHD--NHIGEMTVRETLAF 70 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~-~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~--~~~~~lTv~e~l~f 70 (1262)
+++|+||||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++ .+.|.+||.+++..
T Consensus 35 ~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~ 114 (326)
T PRK11022 35 VVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIME 114 (326)
T ss_pred EEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHH
Confidence 479999999999999999999997421 138999999998764321 23699999997 47889999999877
Q ss_pred HHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccc
Q 000838 71 SARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQK 150 (1262)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqk 150 (1262)
....... . ...+.++++.++++.+||.+..+ .-++++++||||||
T Consensus 115 ~l~~~~~-~--------------------------------~~~~~~~~~~~~L~~~gL~~~~~--~l~~~p~~LSgGq~ 159 (326)
T PRK11022 115 AIKVHQG-G--------------------------------NKKTRRQRAIDLLNQVGIPDPAS--RLDVYPHQLSGGMS 159 (326)
T ss_pred HHHHhcC-C--------------------------------CHHHHHHHHHHHHHHCCCCChHH--HHhCCchhCCHHHH
Confidence 5432110 0 00122345778899999975321 11256788999999
Q ss_pred hhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 151 KRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 151 qRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
|||+|||||+.+|++|++||||+|||+.++.++++.|+++.+. .+.+++++||+...+.+.+|||++|++|++++.|++
T Consensus 160 QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~ 238 (326)
T PRK11022 160 QRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHKIIVMYAGQVVETGKA 238 (326)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987643 345677899999999999999999999999999999
Q ss_pred chHH
Q 000838 231 ELVL 234 (1262)
Q Consensus 231 ~~~~ 234 (1262)
+++.
T Consensus 239 ~~~~ 242 (326)
T PRK11022 239 HDIF 242 (326)
T ss_pred HHHh
Confidence 8875
No 331
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.2e-33 Score=269.45 Aligned_cols=188 Identities=23% Similarity=0.343 Sum_probs=160.9
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEecCCCCCCCC
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH---ETFARISGYCEQNDIHSPF 792 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ 792 (1262)
++..+|+++|+.+++||..+|.||||||||||+|+++.... +++|.+++.|++.+. +.+|+.++||.|.+.+++
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lis--p~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg- 90 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFG- 90 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccC--CCCceEEEcCccccccChHHHHHHHHHHHcCccccc-
Confidence 45679999999999999999999999999999999999887 468999999998643 567889999999999998
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCC
Q 000838 793 VTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 872 (1262)
Q Consensus 793 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPt 872 (1262)
-||++|+.|.-.+|... .+ +......++.+++.+..-++ .+.+||||||||++|+|.|..-|+||+|||||
T Consensus 91 ~tVeDNlifP~~~r~rr-~d----r~aa~~llar~~l~~~~L~k----~it~lSGGE~QriAliR~Lq~~P~ILLLDE~T 161 (223)
T COG4619 91 DTVEDNLIFPWQIRNRR-PD----RAAALDLLARFALPDSILTK----NITELSGGEKQRIALIRNLQFMPKILLLDEIT 161 (223)
T ss_pred cchhhccccchHHhccC-CC----hHHHHHHHHHcCCchhhhcc----hhhhccchHHHHHHHHHHhhcCCceEEecCch
Confidence 59999999998777533 22 23356788899987653222 24579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 873 SGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 873 sgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|.||+.+++.|-++|.++. ++.+.++.+|||+.. -...+|+.+
T Consensus 162 sALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dq-a~rha~k~i 205 (223)
T COG4619 162 SALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQ-AIRHADKVI 205 (223)
T ss_pred hhcChhhHHHHHHHHHHHhhhhceEEEEEecChHH-HhhhhheEE
Confidence 9999999999999999987 568999999999874 456888865
No 332
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.9e-32 Score=297.85 Aligned_cols=186 Identities=20% Similarity=0.339 Sum_probs=154.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-cccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|+.||+.+....... .
T Consensus 26 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~~-~ 101 (213)
T TIGR01277 26 IVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGLK-L 101 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHHHHhHhhccCC-c
Confidence 47999999999999999999999998 99999999987532 2346799999999899999999999875421100 0
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..+.+++++++++.+||++..+ +.++.||||||||++|||||
T Consensus 102 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrl~laral 143 (213)
T TIGR01277 102 ---------------------------------NAEQQEKVVDAAQQVGIADYLD-----RLPEQLSGGQRQRVALARCL 143 (213)
T ss_pred ---------------------------------cHHHHHHHHHHHHHcCcHHHhh-----CCcccCCHHHHHHHHHHHHH
Confidence 0001234567899999987666 44567999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecC
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 229 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~ 229 (1262)
+.+|++++|||||+|||+.++..+.+.|+++.+ +++++|++++|+.+++.+.||++++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCS-ERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998754 334667778999999999999999999999998874
No 333
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7.5e-33 Score=283.49 Aligned_cols=192 Identities=22% Similarity=0.343 Sum_probs=170.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
|.+++|||||||||.+++|.|+++|+ +|+|.++|.+++... +.+|||.|.+.-+++.+||.|.|.|-+++++..
T Consensus 30 i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~tv~dql~yla~LkGm~-- 103 (300)
T COG4152 30 IFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMTVEDQLKYLAELKGMP-- 103 (300)
T ss_pred EEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccCccCcHHHHHHHHHHhcCCc--
Confidence 57899999999999999999999998 999999999986543 346999999999999999999999999998752
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
.+++++.++.+|+.+++..... +.+++||.|++|++.+-.+++
T Consensus 104 --------------------------------~~e~~~~~~~wLer~~i~~~~~-----~kIk~LSKGnqQKIQfisavi 146 (300)
T COG4152 104 --------------------------------KAEIQKKLQAWLERLEIVGKKT-----KKIKELSKGNQQKIQFISAVI 146 (300)
T ss_pred --------------------------------HHHHHHHHHHHHHhcccccccc-----chHHHhhhhhhHHHHHHHHHh
Confidence 2234556788999999988765 566789999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHHHH
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFF 237 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~~~ 237 (1262)
.+|++++||||+|||||.+.+.+-+.+.++. ..+.+|+..+|.++.+.++||++++|++|+.|.+|+.+++++.|
T Consensus 147 HePeLlILDEPFSGLDPVN~elLk~~I~~lk--~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 147 HEPELLILDEPFSGLDPVNVELLKDAIFELK--EEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred cCCCEEEecCCccCCChhhHHHHHHHHHHHH--hcCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhc
Confidence 9999999999999999999999999998864 34567778999999999999999999999999999999998754
No 334
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=305.50 Aligned_cols=191 Identities=18% Similarity=0.331 Sum_probs=157.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc----ccceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV----PQRTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+......
T Consensus 31 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 107 (241)
T PRK10895 31 IVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD 107 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc
Confidence 47999999999999999999999988 999999999875432 23579999999988888999999987543211
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
. . ..++.+..++++++.+||.+..+ ..++.||||||||++||
T Consensus 108 ~-~--------------------------------~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 108 D-L--------------------------------SAEQREDRANELMEEFHIEHLRD-----SMGQSLSGGERRRVEIA 149 (241)
T ss_pred c-c--------------------------------CHHHHHHHHHHHHHHcCCHHHhh-----cchhhCCHHHHHHHHHH
Confidence 0 0 00012234677899999987655 44568999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||+.+|++++|||||+|||+.++..+.+.++++.+ . +.+|++++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHh
Confidence 999999999999999999999999999999988643 3 456677889999999999999999999999999887653
No 335
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.6e-32 Score=302.01 Aligned_cols=191 Identities=22% Similarity=0.276 Sum_probs=155.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCC----CCceeEEEEECCccCCCCcc-cceEEeeccccC--CCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDS----SLKVSGRVTYNGHNMGEFVP-QRTAAYISQHDN--HIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~----~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~--~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+.+|+.||+.+...
T Consensus 14 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~ 90 (230)
T TIGR02770 14 VLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFTMGNHAIETLR 90 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCcccCHHHHHHHHHH
Confidence 4799999999999999999999988 6 9999999998764333 257999999974 5567899999987543
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcc---cccccccCCcccccccccc
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDN---CADILVGDEMIRGISGGQK 150 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~---~~~t~vg~~~~~~LSGGqk 150 (1262)
..+. . ..+.+++++++++.+||++ ..+ +.+..||||||
T Consensus 91 ~~~~--~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~~~LS~G~~ 131 (230)
T TIGR02770 91 SLGK--L--------------------------------SKQARALILEALEAVGLPDPEEVLK-----KYPFQLSGGML 131 (230)
T ss_pred HcCc--c--------------------------------HHHHHHHHHHHHHHcCCCchHHHHh-----CChhhcCHHHH
Confidence 2110 0 0011234677899999973 333 45667999999
Q ss_pred hhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 151 KRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 151 qRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
|||+|||||+.+|+|++|||||+|||+.++..+.+.|+++.+ +.+++|++++|+.+++...+|++++|++|+++..|++
T Consensus 132 qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 210 (230)
T TIGR02770 132 QRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQ-LFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTV 210 (230)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999998754 2345677789999999999999999999999999998
Q ss_pred chHH
Q 000838 231 ELVL 234 (1262)
Q Consensus 231 ~~~~ 234 (1262)
+++.
T Consensus 211 ~~~~ 214 (230)
T TIGR02770 211 KEIF 214 (230)
T ss_pred HHHH
Confidence 7764
No 336
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-33 Score=277.29 Aligned_cols=192 Identities=29% Similarity=0.423 Sum_probs=160.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCccc---ceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQ---RTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~---~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
|++|+|||||||||||+.|+|++.|+ +|+|.+||.++++.... +.-+..+|+..+-+..||+|-+.++..-.+.
T Consensus 29 v~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~ 105 (259)
T COG4559 29 VLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS 105 (259)
T ss_pred EEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc
Confidence 58999999999999999999999998 99999999998765432 4568899997777778999999998753321
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
+. +..+..+++++.|...++.+.+. +....|||||||||.+||
T Consensus 106 g~--------------------------------~~~e~~~i~~~ala~~d~~~la~-----R~y~~LSGGEqQRVqlAR 148 (259)
T COG4559 106 GR--------------------------------EPEEDERIAAQALAATDLSGLAG-----RDYRTLSGGEQQRVQLAR 148 (259)
T ss_pred CC--------------------------------CchhhHHHHHHHHHHcChhhhhc-----cchhhcCchHHHHHHHHH
Confidence 10 01123445778888889988765 556789999999999999
Q ss_pred HHhc------CCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 158 MMVG------PALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 158 al~~------~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
.|++ ++++||||||||+||...+..++++.+++++. + ..|+.+.||...+..+||||++|++|+++..|+++
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~ 226 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQ 226 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhheeeeeeCCeEeecCCHH
Confidence 9975 44589999999999999999999999999874 3 45666889999999999999999999999999998
Q ss_pred hHH
Q 000838 232 LVL 234 (1262)
Q Consensus 232 ~~~ 234 (1262)
+++
T Consensus 227 ~vl 229 (259)
T COG4559 227 DVL 229 (259)
T ss_pred Hhc
Confidence 875
No 337
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=7.5e-33 Score=342.97 Aligned_cols=188 Identities=27% Similarity=0.413 Sum_probs=158.0
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..++++|++++|+. ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 333 ~~I~~~~vsf~Y~~------------~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~--p~~G~I~i~g~~ 398 (529)
T TIGR02868 333 PTLELRDLSFGYPG------------SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLD--PLQGEVTLDGVS 398 (529)
T ss_pred ceEEEEEEEEecCC------------CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEE
Confidence 46999999999852 1348999999999999999999999999999999999877 458999999987
Q ss_pred CC--cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000838 771 KK--HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLPG 841 (1262)
Q Consensus 771 ~~--~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 841 (1262)
++ ...+++.++||+|++.+++ -|++||+.++. ++.++ ++++++++..++++. .|+.+|..
T Consensus 399 i~~~~~~lr~~i~~V~Q~~~lF~-~TI~eNI~~g~-----~~~~~----e~i~~al~~a~l~~~i~~lp~GldT~ige~- 467 (529)
T TIGR02868 399 VSSLQDELRRRISVFAQDAHLFD-TTVRDNLRLGR-----PDATD----EELWAALERVGLADWLRSLPDGLDTVLGEG- 467 (529)
T ss_pred hhhHHHHHHhheEEEccCccccc-ccHHHHHhccC-----CCCCH----HHHHHHHHHcCCHHHHHhCcccccchhccc-
Confidence 54 3456788999999999886 59999998752 22222 336778887777643 46667653
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCC
Q 000838 842 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 904 (1262)
Q Consensus 842 ~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~ 904 (1262)
..+||||||||++||||++++|+||+||||||+||+.++..+++.|+++. +++|+|+++|++
T Consensus 468 G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~-~~~TvIiItHrl 529 (529)
T TIGR02868 468 GARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL-SGKTVVVITHHL 529 (529)
T ss_pred cCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEecCC
Confidence 45799999999999999999999999999999999999999999999864 579999999985
No 338
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-32 Score=294.46 Aligned_cols=210 Identities=22% Similarity=0.299 Sum_probs=169.2
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC-C--CeeEEEEEECCc
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G--GYITGSIKISGY 769 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~-~--~~~~G~i~~~g~ 769 (1262)
+.++|++.++.... +...+++||||++++||++||+|.|||||||+.++|.|..+ + ...+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~~---------g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTDA---------GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecCC---------ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 45788887775431 24579999999999999999999999999999999999765 2 246789999998
Q ss_pred cCC---cc----cccceEEEecCCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000838 770 PKK---HE----TFARISGYCEQNDI--HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLP 840 (1262)
Q Consensus 770 ~~~---~~----~~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~ 840 (1262)
++- .+ .+.+.+++++|++. +.|.+|+.+.+.-....+.... ..++.++++.++|+.+|+.+-.... +.
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~--~~ 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRL--KS 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHH--hh
Confidence 642 21 13467999999964 6788999988876655432211 3455677789999999998643221 12
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhh
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
.+.+|||||||||.||.||+.+|++|+.||||++||...+.+|+++|+++.+ .|.++|++|||.. -+.+..|++
T Consensus 150 YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri 224 (316)
T COG0444 150 YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRV 224 (316)
T ss_pred CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceE
Confidence 3678999999999999999999999999999999999999999999999986 5999999999986 377788874
No 339
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-32 Score=285.74 Aligned_cols=162 Identities=29% Similarity=0.416 Sum_probs=140.8
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEccc
Confidence 4677777653 2358999999999999999999999999999999999876 358999999987542
Q ss_pred --ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000838 774 --ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRK 851 (1262)
Q Consensus 774 --~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 851 (1262)
..+++.++|++|++.+++.+|+.||+. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998888899998863 8999999
Q ss_pred HHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 852 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 852 rl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|++|||||+.+|++++|||||+|||+.++..+.+.|++++++|.|+|++||++. ++.+..|+.
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i 165 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRV 165 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEE
Confidence 999999999999999999999999999999999999999877899999999975 455566764
No 340
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-32 Score=301.97 Aligned_cols=202 Identities=21% Similarity=0.234 Sum_probs=163.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
-+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 467888887763 246999999999999999999999999999999999976431 2579999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 839 (1262)
.+... ...++.++|++|++.+++ .|+.||+.+....... ....+.+++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 133567999999998887 8999999886543211 122334456788999998853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||+|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||++||++. ++.+.+|+.+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~ 217 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTA 217 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEE
Confidence 457999999999999999999999999999999999999999999999876 689999999975 5667788753
No 341
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-32 Score=302.79 Aligned_cols=201 Identities=21% Similarity=0.284 Sum_probs=162.8
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-e--eEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~-~--~~G~i~~~g 768 (1262)
.+.++|+++.+. .+.+|+|+|+++++||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 577899988763 246999999999999999999999999999999999976532 2 479999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 839 (1262)
.+... ...++.++|++|++.+++ .|+.||+.+....+. ..+..+.++.++++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 234567999999998887 899999987654332 1122333455778899888843 33332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+..|+.
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i 219 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFT 219 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeE
Confidence 457999999999999999999999999999999999999999999999865 699999999975 566677774
No 342
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-32 Score=301.59 Aligned_cols=201 Identities=21% Similarity=0.279 Sum_probs=161.6
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
.+.++|+++.+. ++.+++|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 467889988763 235999999999999999999999999999999999965321 2579999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 839 (1262)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+..++.++++++.+++.+ ..++.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87542 134567999999988887 8999999986543211 122334556788888888753 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||++. ++.+..|++
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~v 215 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDKT 215 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCEE
Confidence 457999999999999999999999999999999999999999999999854 799999999974 466677775
No 343
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.6e-32 Score=302.33 Aligned_cols=187 Identities=22% Similarity=0.317 Sum_probs=149.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeecccc--CCCCCCCHHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHD--NHIGEMTVRETLAFSA 72 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+++.+||+||+.+..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~ 109 (228)
T cd03257 33 TLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPL 109 (228)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHH
Confidence 47999999999999999999999988 999999999875432 245799999997 4667899999998865
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-ccccccccCCcccccccccch
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVGDEMIRGISGGQKK 151 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkq 151 (1262)
...+.... .+..+..++++++.++|. +..+ ..+..|||||||
T Consensus 110 ~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~~LS~G~~q 152 (228)
T cd03257 110 RIHGKLSK--------------------------------KEARKEAVLLLLVGVGLPEEVLN-----RYPHELSGGQRQ 152 (228)
T ss_pred HhccCCcH--------------------------------HHHHHHHHHHHHHHCCCChhHhh-----CCchhcCHHHHH
Confidence 43211000 000011124678889985 4455 445679999999
Q ss_pred hhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 152 RVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 152 RvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
|++|||||+.+|++++|||||+|||+.++..+.+.|+++++ +.+++|++++|+.+++...||++++|++|+++..|
T Consensus 153 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 153 RVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQE-ELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999998754 22456777899999999999999999999998764
No 344
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.6e-32 Score=300.50 Aligned_cols=181 Identities=22% Similarity=0.314 Sum_probs=150.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.+....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (222)
T PRK10908 30 MAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLII 106 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHh
Confidence 47999999999999999999999988 999999998875432 245799999998888899999999986543
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.+.. .++..+.++++++.+||.+..+ +.+..||||||||++
T Consensus 107 ~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv~ 147 (222)
T PRK10908 107 AGAS----------------------------------GDDIRRRVSAALDKVGLLDKAK-----NFPIQLSGGEQQRVG 147 (222)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCChhhhh-----CCchhCCHHHHHHHH
Confidence 2110 0011224567889999987665 445679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEE
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIV 225 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~ 225 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . ++++++++|+.+++...||++++|++|+++
T Consensus 148 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 148 IARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999999999999999998643 3 456777999999999999999999999985
No 345
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.1e-32 Score=334.08 Aligned_cols=204 Identities=26% Similarity=0.327 Sum_probs=168.8
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++++. ++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 68 (501)
T PRK10762 4 LLQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEV 68 (501)
T ss_pred eEEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEC
Confidence 367889988763 3469999999999999999999999999999999999876 3589999999875
Q ss_pred Ccc----cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000838 772 KHE----TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLA-PEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLS 846 (1262)
Q Consensus 772 ~~~----~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 846 (1262)
... ..++.++|++|++.+++.+||+||+.++...+.. ...+..+.+++++++++.+|+.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 143 (501)
T PRK10762 69 TFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELS 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCC
Confidence 321 1245799999999899999999999886432211 11223334456889999999988777664 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||++||+||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++|||+. ++.+.+|+++
T Consensus 144 gG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~ 212 (501)
T PRK10762 144 IGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVT 212 (501)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999877999999999975 4666778753
No 346
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-32 Score=302.13 Aligned_cols=202 Identities=27% Similarity=0.296 Sum_probs=162.0
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--CC-eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~~~g 768 (1262)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 477899988763 2469999999999999999999999999999999999732 21 2479999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 839 (1262)
.+... ..+++.++|++|++.+++ .|+.||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87531 234567999999988887 899999988643321 1122333456778899988753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||++. ++.+.+|+++
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~ 218 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTG 218 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999975 5667788753
No 347
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-32 Score=302.56 Aligned_cols=202 Identities=21% Similarity=0.263 Sum_probs=162.9
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--C-eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~--~-~~~G~i~~~g 768 (1262)
.+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ . +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 578999988763 24699999999999999999999999999999999997642 1 1479999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL----RQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~----~~~~~~~ 839 (1262)
.+... ...++.++|++|++.+++. |+.||+.+....+. ....++.+++++++++.+++.+. .+..
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--- 152 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--- 152 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhCC---
Confidence 87531 2345679999999888875 99999987643321 11233344557888999988542 2332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+.+||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|++||++. ++.+..|+.+
T Consensus 153 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~ 225 (259)
T PRK14274 153 --ALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTA 225 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999975 5666778753
No 348
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-32 Score=306.34 Aligned_cols=204 Identities=23% Similarity=0.382 Sum_probs=161.6
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 578899988763 12469999999999999999999999999999999999876 4589999999876
Q ss_pred CcccccceEEEecCCCCCC--CCCCHHHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 772 KHETFARISGYCEQNDIHS--PFVTVHESLAFSAWLRL-APEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~~~~--~~lTv~e~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
.....++.++|++|++.+. ...+++|++.+...... .........++.++++++.+|+.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234699999997652 23478888865321000 001111223445778999999988777764 479999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+..|+.
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v 212 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYT 212 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEE
Confidence 999999999999999999999999999999999999999999877999999999975 456667764
No 349
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.1e-32 Score=337.13 Aligned_cols=203 Identities=31% Similarity=0.445 Sum_probs=168.2
Q ss_pred CCCCcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEE
Q 000838 687 PFEPHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKI 766 (1262)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~ 766 (1262)
|.-...+.++|+++.+... +..+|+|+|++|+|||.+||+|+||||||||+|+|.|... +.+|+|++
T Consensus 466 ~~~~g~I~~~nvsf~y~~~-----------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~ 532 (709)
T COG2274 466 PKLQGEIEFENVSFRYGPD-----------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILL 532 (709)
T ss_pred cccCceEEEEEEEEEeCCC-----------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEE
Confidence 4445689999999998642 2369999999999999999999999999999999999887 46899999
Q ss_pred CCccCC---cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-------cccccc
Q 000838 767 SGYPKK---HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-------PLRQSL 836 (1262)
Q Consensus 767 ~g~~~~---~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-------~~~~~~ 836 (1262)
||.+.+ ...+|+.+|||+|++.++. -|++||+.++. ++.+.++ +.++++..|.. .-.++.
T Consensus 533 dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e~----i~~A~~~ag~~~fI~~lP~gy~t~ 602 (709)
T COG2274 533 DGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDEE----IIEAAQLAGAHEFIENLPMGYDTP 602 (709)
T ss_pred CCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHHH----HHHHHHHhCcHHHHHhcccccccc
Confidence 999864 3568899999999998875 69999998752 2333222 44455554443 344666
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 837 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 837 ~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+|. +..+||||||||++|||||+++|+||+||||||+||+.+++.|.+.|+++. +|+|+|+++|+++ ....+|+.+
T Consensus 603 v~E-~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIi 678 (709)
T COG2274 603 VGE-GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRII 678 (709)
T ss_pred ccc-CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEE
Confidence 664 456899999999999999999999999999999999999999999999986 4799999999886 788899864
No 350
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-32 Score=301.80 Aligned_cols=205 Identities=19% Similarity=0.240 Sum_probs=160.7
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--CC-eeEEEEEECCcc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGSIKISGYP 770 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~~~g~~ 770 (1262)
.++|+++.+. .+.+|+|+||++++||+++|+||||||||||+++|+|... +. +.+|+|.++|.+
T Consensus 7 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~ 73 (251)
T PRK14244 7 SVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGID 73 (251)
T ss_pred EeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEe
Confidence 4677777653 2469999999999999999999999999999999999754 21 358999999987
Q ss_pred CCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000838 771 KKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGL 845 (1262)
Q Consensus 771 ~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 845 (1262)
... ...++.++|++|++.+++. |+.||+.+....+.. ....+..++.++++++.+|+.+....... ..+.+|
T Consensus 74 i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~L 150 (251)
T PRK14244 74 VYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLK-DSAFEL 150 (251)
T ss_pred hHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhh-cChhhC
Confidence 532 1245679999999888875 999999876433211 11223344567889999998652211111 124579
Q ss_pred CHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 846 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 846 SgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||++||++. ++.+.+|+++
T Consensus 151 S~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~ 219 (251)
T PRK14244 151 SGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVA 219 (251)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEE
Confidence 9999999999999999999999999999999999999999999985 4899999999975 4566778753
No 351
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-32 Score=301.47 Aligned_cols=206 Identities=22% Similarity=0.264 Sum_probs=162.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
.+.++|+++.+. ++.+++|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g 69 (250)
T PRK14262 3 IIEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKG 69 (250)
T ss_pred eEEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 367888887763 246899999999999999999999999999999999975421 2589999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 843 (1262)
.+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+..+... ...+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~ 145 (250)
T PRK14262 70 QDIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSEL-NKPGT 145 (250)
T ss_pred EEcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHH-hCChh
Confidence 87532 134567999999998887 899999988653321 1122334455788899988864211111 11245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+..|+++
T Consensus 146 ~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~ 216 (250)
T PRK14262 146 RLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIA 216 (250)
T ss_pred hcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEE
Confidence 7999999999999999999999999999999999999999999999865 789999999975 4666778753
No 352
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-33 Score=293.11 Aligned_cols=186 Identities=26% Similarity=0.295 Sum_probs=166.1
Q ss_pred eEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEecCCCCCC
Q 000838 718 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH-------ETFARISGYCEQNDIHS 790 (1262)
Q Consensus 718 ~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~ 790 (1262)
..-++|+|++++.||+..|||=||||||||+++|.+... ++.|+|+++|.++.. .-+++.++.|+|...++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 456899999999999999999999999999999999887 568999999987532 12457899999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeC
Q 000838 791 PFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 870 (1262)
Q Consensus 791 ~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDE 870 (1262)
|+.||.||..|+..++ ..+++++++++.++++.+||..+.+++ +++||||+||||.|||||+.+|+||||||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~y-----p~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKY-----PNELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcC-----cccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999998776 456788899999999999999999887 45899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000838 871 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 914 (1262)
Q Consensus 871 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 914 (1262)
|+|.|||--+.++++.|.++.++ ++|||++|||.. |.+..-|+
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~r 234 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDR 234 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccce
Confidence 99999999999999999998765 899999999975 45556666
No 353
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.1e-32 Score=304.67 Aligned_cols=192 Identities=23% Similarity=0.400 Sum_probs=156.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSS--LKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|.++|+ ...+|+|.++|.++... ..++.++|++|++.+++ .|++||+.++..
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~ 107 (247)
T TIGR00972 29 VTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPR 107 (247)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHH
Confidence 47999999999999999999999763 12379999999987532 12467999999988888 999999998654
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc----ccccccccCCccccccccc
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD----NCADILVGDEMIRGISGGQ 149 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~----~~~~t~vg~~~~~~LSGGq 149 (1262)
.++... ..+..+.++++++.+||. +..+ +.++.|||||
T Consensus 108 ~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~~~~LSgG~ 149 (247)
T TIGR00972 108 LHGIKD---------------------------------KKELDEIVEESLKKAALWDEVKDRLH-----DSALGLSGGQ 149 (247)
T ss_pred hcCCCC---------------------------------HHHHHHHHHHHHHHcCCCcchhhHhh-----CCcccCCHHH
Confidence 321000 001123467789999997 4444 4556899999
Q ss_pred chhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecC
Q 000838 150 KKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 229 (1262)
Q Consensus 150 kqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~ 229 (1262)
|||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+++.+.||++++|++|++++.|+
T Consensus 150 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (247)
T TIGR00972 150 QQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDRTAFFYDGELVEYGP 226 (247)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998643 3 567778999999999999999999999999999
Q ss_pred cchHH
Q 000838 230 RELVL 234 (1262)
Q Consensus 230 ~~~~~ 234 (1262)
++++.
T Consensus 227 ~~~~~ 231 (247)
T TIGR00972 227 TEQIF 231 (247)
T ss_pred HHHHH
Confidence 87653
No 354
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-32 Score=303.55 Aligned_cols=188 Identities=23% Similarity=0.380 Sum_probs=153.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc----ccceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV----PQRTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 109 (237)
T PRK11614 33 IVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAE 109 (237)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhccC
Confidence 47999999999999999999999988 999999999875432 23579999999989998999999988542110
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHh-CCcccccccccCCcccccccccchhhHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVL-GLDNCADILVGDEMIRGISGGQKKRVTT 155 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqkqRvsi 155 (1262)
. + +....++++++.+ ++.+..+ ..+..||||||||++|
T Consensus 110 ---~-~--------------------------------~~~~~~~~~l~~~~~l~~~~~-----~~~~~LS~G~~qrl~l 148 (237)
T PRK11614 110 ---R-D--------------------------------QFQERIKWVYELFPRLHERRI-----QRAGTMSGGEQQMLAI 148 (237)
T ss_pred ---h-h--------------------------------HHHHHHHHHHHHHHHHHHHHh-----CchhhCCHHHHHHHHH
Confidence 0 0 0011234456666 4655444 3456799999999999
Q ss_pred HHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 156 GEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 156 A~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
||||+.+|+|++|||||+|||+.++..+.+.|+++.+ + +++|++++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 149 a~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 149 GRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-Q-GMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred HHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHh
Confidence 9999999999999999999999999999999998653 3 455666899999999999999999999999999987763
No 355
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-32 Score=261.79 Aligned_cols=188 Identities=24% Similarity=0.334 Sum_probs=157.7
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCC--CC-------cccceEEeeccccCCCCCCCHHHHHHHHH
Q 000838 2 TLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMG--EF-------VPQRTAAYISQHDNHIGEMTVRETLAFSA 72 (1262)
Q Consensus 2 ~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~--~~-------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~ 72 (1262)
+.++||||+|||||++.|.=+..|. +|+..+.|...+ .. ..|+.+|+|+|+-.++|.+||.||+.-+.
T Consensus 31 lvllgpsgagkssllr~lnlle~p~---sg~l~ia~~~fd~s~~~~~k~i~~lr~~vgmvfqqy~lwphltv~enlieap 107 (242)
T COG4161 31 LVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQENLIEAP 107 (242)
T ss_pred EEEECCCCCchHHHHHHHHHHhCCC---CCeEEecccccccccCccHHHHHHHHHhhhhhhhhhccCchhHHHHHHHhhh
Confidence 5789999999999999999887777 999999876542 11 12468999999999999999999997632
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchh
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKR 152 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 152 (1262)
++- ...+.++++.++.++|+.+.|.+.+| +.+-.|||||+||
T Consensus 108 -~kv--------------------------------~gl~~~qa~~~a~ellkrlrl~~~ad-----r~plhlsggqqqr 149 (242)
T COG4161 108 -CRV--------------------------------LGLSKDQALARAEKLLKRLRLKPYAD-----RYPLHLSGGQQQR 149 (242)
T ss_pred -HHH--------------------------------hCCCHHHHHHHHHHHHHHhccccccc-----cCceecccchhhh
Confidence 110 01123345566788999999999998 6777899999999
Q ss_pred hHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcch
Q 000838 153 VTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPREL 232 (1262)
Q Consensus 153 vsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~ 232 (1262)
|+|||||+..|+||++||||++|||+-..++++.+++++. .+.+-++++|..+.+.+.+.+++.|.+|+|++.|+.+.
T Consensus 150 vaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~--tgitqvivthev~va~k~as~vvyme~g~ive~g~a~~ 227 (242)
T COG4161 150 VAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAE--TGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASC 227 (242)
T ss_pred HHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHh--cCceEEEEEeehhHHHhhhhheEeeecCeeEeecchhh
Confidence 9999999999999999999999999999999999999864 34555668999999999999999999999999998764
No 356
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-32 Score=305.81 Aligned_cols=202 Identities=24% Similarity=0.293 Sum_probs=166.6
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+... ..+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 47789998877411 12358999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEecCCCC-CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 772 KH---ETFARISGYCEQNDI-HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~-~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
.. ...++.+||++|++. .++..||.||+.+..... ....++..++++++++.+||.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 42 234677999999974 567789999998764322 123334445688999999998777665 357999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++.. + ...|++
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i 210 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRI 210 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEE
Confidence 9999999999999999999999999999999999999999999875 9999999999864 3 357775
No 357
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.2e-32 Score=301.40 Aligned_cols=187 Identities=22% Similarity=0.310 Sum_probs=153.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc----ccceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV----PQRTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++....+
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (230)
T TIGR03410 28 VTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP 104 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC
Confidence 47999999999999999999999988 999999998875432 13569999999989999999999988654221
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhC-CcccccccccCCcccccccccchhhHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLG-LDNCADILVGDEMIRGISGGQKKRVTT 155 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg-L~~~~~t~vg~~~~~~LSGGqkqRvsi 155 (1262)
.. ..+..+++++.++ +.+..+ +.++.||||||||++|
T Consensus 105 ~~-------------------------------------~~~~~~~~l~~~~~l~~~~~-----~~~~~LS~G~~qrv~l 142 (230)
T TIGR03410 105 RR-------------------------------------SRKIPDEIYELFPVLKEMLG-----RRGGDLSGGQQQQLAI 142 (230)
T ss_pred cc-------------------------------------hHHHHHHHHHHHHhHHHHhh-----CChhhCCHHHHHHHHH
Confidence 00 0112344566665 455444 4566899999999999
Q ss_pred HHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 156 GEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 156 A~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
||||+.+|++++|||||+|||+.++.++.+.|++..+. .+++|++++|+.+++...||++++|++|++++.|+.+++
T Consensus 143 a~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 143 ARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999999999999986542 345677789999999999999999999999999988765
No 358
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3.4e-32 Score=298.74 Aligned_cols=187 Identities=32% Similarity=0.520 Sum_probs=150.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC---CCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD---SSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~---~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+||||||||||+++|+|.++ |+ +|+|.++|.++.....++.++|++|++.+++.+||+||+.++......
T Consensus 35 ~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~ 111 (226)
T cd03234 35 VMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLP 111 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcc
Confidence 479999999999999999999998 76 999999998876444466799999999999999999999987543211
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHH-HHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDY-YLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
... . .......++. .++.+++.+..+ +.++.||||||||++||
T Consensus 112 ~~~---~----------------------------~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrl~la 155 (226)
T cd03234 112 RKS---S----------------------------DAIRKKRVEDVLLRDLALTRIGG-----NLVKGISGGERRRVSIA 155 (226)
T ss_pred ccc---c----------------------------hHHHHHHHHHHHHHhhcchhhhc-----ccccCcCHHHHHHHHHH
Confidence 000 0 0001112333 788888877655 45567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCC-hhHHHhccceEEecCCeEEEec
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPA-PETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~-~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
|+|+.+|++++|||||+|||+.++..+.+.|++..+ .+ .++++++|+. .++.+.||++++|++|++++.|
T Consensus 156 ral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~-~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 156 VQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RN-RIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999998653 34 4556677776 6899999999999999998865
No 359
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=5.1e-31 Score=344.69 Aligned_cols=120 Identities=22% Similarity=0.275 Sum_probs=94.2
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000838 789 HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-RQSLVGLPGVNGLSTEQRKRLTIAVELV---ANPS 864 (1262)
Q Consensus 789 ~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGqrqrl~ia~al~---~~p~ 864 (1262)
.+...||.|+|.+...-......+.++..+.+ ++++.+||.+. .++. ...||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44568999999887542211111223344455 47889999875 5655 3479999999999999998 6999
Q ss_pred CcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 865 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 865 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+++|||||+|||+.+...+++.|+++.++|.|||+++|++. .+ ...|+++
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi 882 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVL 882 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEE
Confidence 99999999999999999999999999888999999999986 33 7788753
No 360
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-32 Score=308.80 Aligned_cols=191 Identities=24% Similarity=0.337 Sum_probs=157.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccC-CCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDN-HIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+...||.||+.++....+
T Consensus 32 ~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~ 108 (277)
T PRK13652 32 RIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINLG 108 (277)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHcC
Confidence 47999999999999999999999998 999999999875422 2357999999863 3446799999987653221
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. .++..++++++++.+||.+..++ .++.||||||||++||
T Consensus 109 ~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~Gq~qrl~la 149 (277)
T PRK13652 109 LD----------------------------------EETVAHRVSSALHMLGLEELRDR-----VPHHLSGGEKKRVAIA 149 (277)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHCCChhHhcC-----CcccCCHHHHHHHHHH
Confidence 10 01122346778999999877764 4567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.+.|||+++|++|++++.|+++++.
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 226 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIF 226 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHh
Confidence 9999999999999999999999999999999987543 3466777899999999999999999999999999988764
No 361
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=2.6e-32 Score=305.69 Aligned_cols=205 Identities=21% Similarity=0.294 Sum_probs=158.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc----cceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP----QRTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++..... +..++|++|++.+++.+||+||+.++.....
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 109 (255)
T PRK11300 33 IVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQL 109 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccc
Confidence 47999999999999999999999998 9999999998754321 2358999999999999999999998653210
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. +...... +. +. . .....+....++++++.+||.+..+ +.++.||||||||++||
T Consensus 110 ~~---~~~~~~~------~~-~~--~-------~~~~~~~~~~~~~~l~~~gl~~~~~-----~~~~~LS~G~~qrv~la 165 (255)
T PRK11300 110 KT---GLFSGLL------KT-PA--F-------RRAESEALDRAATWLERVGLLEHAN-----RQAGNLAYGQQRRLEIA 165 (255)
T ss_pred cc---hhhhhhc------cc-cc--c-------ccchhHHHHHHHHHHHhCChhhhhh-----CChhhCCHHHHHHHHHH
Confidence 00 0000000 00 00 0 0000112234677899999987666 44567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
|||+.+|++++|||||+|||+.++..+.+.|+++.+ +.+++|++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 166 ~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 241 (255)
T PRK11300 166 RCMVTQPEILMLDEPAAGLNPKETKELDELIAELRN-EHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEI 241 (255)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHh-hcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHHH
Confidence 999999999999999999999999999999998754 3245677789999999999999999999999999987765
No 362
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.2e-31 Score=307.74 Aligned_cols=209 Identities=20% Similarity=0.228 Sum_probs=166.0
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEC
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSIKIS 767 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~~~ 767 (1262)
..+.++|+++.+.. +.+.+|+|+||+|++||++||+||||||||||+++|+|.... .+.+|+|.+|
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 46889999988742 124699999999999999999999999999999999997542 2457999999
Q ss_pred CccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000838 768 GYPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGV 842 (1262)
Q Consensus 768 g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 842 (1262)
|.++.. ...++.++|+||++.+++ .|++||+.|...... ..+.+..++.++++++.++|.+..+..++. .+
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~--~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~ 223 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNG--INDRKILEKIVEKSLKSAALWDEVKDDLDK-AG 223 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcC--CChHHHHHHHHHHHHHHcCCcchhhhhhhC-Cc
Confidence 998642 235678999999998875 799999998643221 111222334567888988875433333332 35
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||++. .+.+.+|+++
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Drii 295 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETV 295 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEE
Confidence 67999999999999999999999999999999999999999999999875 699999999975 4556688854
No 363
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.98 E-value=3.6e-32 Score=299.16 Aligned_cols=188 Identities=24% Similarity=0.294 Sum_probs=153.6
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC--eeEEEEEECCccCCcccc-cceEEEecCCCC--CCCCCC
Q 000838 720 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGSIKISGYPKKHETF-ARISGYCEQNDI--HSPFVT 794 (1262)
Q Consensus 720 il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~--~~~G~i~~~g~~~~~~~~-~~~~~~v~q~~~--~~~~lT 794 (1262)
+++|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 479999999999999999999999999999999987631 158999999987643222 357999999984 556789
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCC
Q 000838 795 VHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN---PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 871 (1262)
Q Consensus 795 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~---~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEP 871 (1262)
+.|++.+....... ..+..+++++++++.+++. +..++. +..||||||||++|||||+.+|++|+||||
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGK---LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCc---cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999775433211 1233445688999999997 344444 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 872 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 872 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++....|+++
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~ 197 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVA 197 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 9999999999999999998764 899999999976 5666788753
No 364
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=8.6e-32 Score=300.27 Aligned_cols=205 Identities=23% Similarity=0.249 Sum_probs=161.5
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 466788887763 246999999999999999999999999999999999976532 3589999999
Q ss_pred ccCC----cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000838 769 YPKK----HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNG 844 (1262)
Q Consensus 769 ~~~~----~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 844 (1262)
.+.. ....++.++|++|++.+++ .|+.||+.+...... ....+..++++.++++.+++.+....... ..+.+
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLK-SHAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhh-cCccc
Confidence 8753 1234567999999998887 899999987643221 11223334557788888887542211111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 845 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 845 lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+.+|+.
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i 214 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRT 214 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEE
Confidence 999999999999999999999999999999999999999999999875 589999999975 566677875
No 365
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.98 E-value=2.7e-32 Score=304.73 Aligned_cols=191 Identities=23% Similarity=0.321 Sum_probs=158.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC----------------cccceEEeeccccCCCCCCCH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF----------------VPQRTAAYISQHDNHIGEMTV 64 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~----------------~~~~~~~yv~Q~~~~~~~lTv 64 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++..|+
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 104 (252)
T TIGR03005 28 KVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTV 104 (252)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeEEEecCcccCCCCcH
Confidence 47999999999999999999999988 99999999887432 124579999999989999999
Q ss_pred HHHHHHHHhc-cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCccc
Q 000838 65 RETLAFSARC-QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIR 143 (1262)
Q Consensus 65 ~e~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~ 143 (1262)
.||+.++... ++.. ..+..+.++++++.+|+.+..+ +.+.
T Consensus 105 ~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~-----~~~~ 145 (252)
T TIGR03005 105 LDNVTEAPVLVLGMA----------------------------------RAEAEKRAMELLDMVGLADKAD-----HMPA 145 (252)
T ss_pred HHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCChhHhh-----cChh
Confidence 9999885321 1000 0011234567899999987665 4556
Q ss_pred ccccccchhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCe
Q 000838 144 GISGGQKKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQ 223 (1262)
Q Consensus 144 ~LSGGqkqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~ 223 (1262)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++..+. .++++++++|+.+++.+++|++++|++|+
T Consensus 146 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 224 (252)
T TIGR03005 146 QLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGFAREFADRVCFFDKGR 224 (252)
T ss_pred hcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999987543 34677778999999999999999999999
Q ss_pred EEEecCcchHH
Q 000838 224 IVYQGPRELVL 234 (1262)
Q Consensus 224 i~~~G~~~~~~ 234 (1262)
+++.|+.+++.
T Consensus 225 i~~~g~~~~~~ 235 (252)
T TIGR03005 225 IVEQGKPDEIF 235 (252)
T ss_pred EEEeCCHHHHh
Confidence 99999877653
No 366
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.3e-31 Score=301.87 Aligned_cols=204 Identities=22% Similarity=0.238 Sum_probs=164.2
Q ss_pred CcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEE
Q 000838 690 PHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSIKI 766 (1262)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~~ 766 (1262)
...+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|...+ .+.+|+|.+
T Consensus 23 ~~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i 89 (272)
T PRK14236 23 QTALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRL 89 (272)
T ss_pred CcEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEE
Confidence 34688999998773 24699999999999999999999999999999999998652 135899999
Q ss_pred CCccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccc
Q 000838 767 SGYPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLV 837 (1262)
Q Consensus 767 ~g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~ 837 (1262)
+|.+... ...++.++|++|++.+++. |+.||+.+....... ...+..++.++++++.+++.+ ..+..
T Consensus 90 ~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~- 165 (272)
T PRK14236 90 DGQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGI--NNRRVLDEAVERSLRGAALWDEVKDRLHEN- 165 (272)
T ss_pred CCEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCChhHHHHhhCC-
Confidence 9987532 2346789999999988885 999999876433211 122233455788899888864 22332
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 838 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 838 ~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ +.|||++||++. ++.+.+|+++
T Consensus 166 ----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~ 238 (272)
T PRK14236 166 ----AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTA 238 (272)
T ss_pred ----cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEE
Confidence 457999999999999999999999999999999999999999999999975 789999999975 4566778753
No 367
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=2.5e-32 Score=307.62 Aligned_cols=190 Identities=25% Similarity=0.362 Sum_probs=155.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccC-CCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDN-HIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++. .++.+||+||+.++....+
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~ 113 (271)
T PRK13632 37 YVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENKK 113 (271)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHcC
Confidence 47999999999999999999999988 999999999875432 2467999999963 5778899999988653211
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. .++.+.+++++++.+||.+..++ .++.||||||||++||
T Consensus 114 ~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~la 154 (271)
T PRK13632 114 VP----------------------------------PKKMKDIIDDLAKKVGMEDYLDK-----EPQNLSGGQKQRVAIA 154 (271)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHcCCHHHhhC-----CcccCCHHHHHHHHHH
Confidence 00 01122346778999999887764 4567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||+.+|++++|||||+|||+.++..+++.|+++++ +++++|++++|+.+++. .||++++|++|+++..|+.+++.
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~ 230 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRK-TRKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGKPKEIL 230 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEEechhHHh-hCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999998754 33456777888888875 79999999999999999877653
No 368
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=99.98 E-value=3.8e-31 Score=334.25 Aligned_cols=109 Identities=19% Similarity=0.263 Sum_probs=91.3
Q ss_pred hhhhHHHHHHHhCCccc-ccccccCCcccccccccchhhHHHHHHhcCC--eEEEEeCCCccccHHHHHHHHHHHHHHhh
Q 000838 116 ANVITDYYLKVLGLDNC-ADILVGDEMIRGISGGQKKRVTTGEMMVGPA--LAMFMDEISTGLDSSTTFQIVNCLRQNIH 192 (1262)
Q Consensus 116 ~~~~v~~~l~~lgL~~~-~~t~vg~~~~~~LSGGqkqRvsiA~al~~~p--~illlDEPtsgLD~~~~~~i~~~l~~~~~ 192 (1262)
...+++ .++.+||.+. .| +.+.+|||||||||.||++|..+| ++++|||||+|||+..+.++++.|+++.+
T Consensus 466 i~~rl~-~L~~vGL~~l~l~-----r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~ 539 (943)
T PRK00349 466 IRERLK-FLVDVGLDYLTLS-----RSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRD 539 (943)
T ss_pred HHHHHH-HhhccccCCCCCC-----CchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHh
Confidence 344554 6889999864 55 455689999999999999999997 99999999999999999999999998743
Q ss_pred hcCCEEEEEecCCChhHHHhccceEEe------cCCeEEEecCcchH
Q 000838 193 INSETAVISLLQPAPETYNLFDDIILL------SDGQIVYQGPRELV 233 (1262)
Q Consensus 193 ~~~~~~ii~~~~~~~~~~~~~D~i~vl------~~G~i~~~G~~~~~ 233 (1262)
. +.+|++++|+.+++. .||+|++| ++|++++.|+++++
T Consensus 540 -~-G~TVIvVeH~~~~i~-~aD~vi~LgpgaG~~~G~iv~~g~~~e~ 583 (943)
T PRK00349 540 -L-GNTLIVVEHDEDTIR-AADYIVDIGPGAGVHGGEVVASGTPEEI 583 (943)
T ss_pred -C-CCEEEEEeCCHHHHH-hCCEEEEeccccCCCCCEEeeccCHHHH
Confidence 3 456677899988775 69999999 89999998886654
No 369
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=99.98 E-value=9.6e-32 Score=301.23 Aligned_cols=201 Identities=24% Similarity=0.239 Sum_probs=161.0
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc-
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP- 770 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~- 770 (1262)
.+.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 477889988763 2469999999999999999999999999999999999876 458999999986
Q ss_pred ----CCcc---c----ccceEEEecCCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000838 771 ----KKHE---T----FARISGYCEQNDI--HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-LRQSL 836 (1262)
Q Consensus 771 ----~~~~---~----~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~ 836 (1262)
+... . .++.++|++|++. +.+.+|+.||+.+...... .....+.++.+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2456999999974 5677899999876432211 1122234456788999999964 45554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 837 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 837 ~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||++. .+.+..|+.
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998765 899999999975 344566764
No 370
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=99.98 E-value=3.2e-32 Score=304.92 Aligned_cols=190 Identities=23% Similarity=0.330 Sum_probs=156.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC----------------cccceEEeeccccCCCCCCCH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF----------------VPQRTAAYISQHDNHIGEMTV 64 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~----------------~~~~~~~yv~Q~~~~~~~lTv 64 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 33 ~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv 109 (257)
T PRK10619 33 VISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTV 109 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceEEEecCcccCCCCcH
Confidence 47999999999999999999999988 99999999876421 124579999999999999999
Q ss_pred HHHHHHHHh-ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccc-cccccCCcc
Q 000838 65 RETLAFSAR-CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCA-DILVGDEMI 142 (1262)
Q Consensus 65 ~e~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~-~t~vg~~~~ 142 (1262)
+||+.++.. .... ...+.++++.++++.+||.+.. + +.+
T Consensus 110 ~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~~l~~~gl~~~~~~-----~~~ 150 (257)
T PRK10619 110 LENVMEAPIQVLGL----------------------------------SKQEARERAVKYLAKVGIDERAQG-----KYP 150 (257)
T ss_pred HHHHHHHHHHhCCC----------------------------------CHHHHHHHHHHHHHHcCCChhhhh-----CCc
Confidence 999987542 1100 0001223466789999997653 4 456
Q ss_pred cccccccchhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCC
Q 000838 143 RGISGGQKKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDG 222 (1262)
Q Consensus 143 ~~LSGGqkqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G 222 (1262)
..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++..+|||+++|++|
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~~~~~~~d~i~~l~~G 228 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMGFARHVSSHVIFLHQG 228 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 68999999999999999999999999999999999999999999998753 3 456677899999999999999999999
Q ss_pred eEEEecCcchHH
Q 000838 223 QIVYQGPRELVL 234 (1262)
Q Consensus 223 ~i~~~G~~~~~~ 234 (1262)
++++.|+++++.
T Consensus 229 ~i~~~~~~~~~~ 240 (257)
T PRK10619 229 KIEEEGAPEQLF 240 (257)
T ss_pred EEEEeCCHHHhh
Confidence 999999887653
No 371
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.98 E-value=2.2e-32 Score=297.31 Aligned_cols=179 Identities=27% Similarity=0.420 Sum_probs=146.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccC-CCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDN-HIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.+|++||+.++....+
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~t~~~~l~~~~~~~~ 105 (211)
T cd03225 29 FVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGPTVEEEVAFGLENLG 105 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCCCcHHHHHHHHHHHcC
Confidence 47999999999999999999999988 999999998875432 2457999999864 4667899999988653221
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. ..+.++.++++++.+||.+..+ +.+..|||||||||+||
T Consensus 106 ~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgG~~qrv~la 146 (211)
T cd03225 106 LP----------------------------------EEEIEERVEEALELVGLEGLRD-----RSPFTLSGGQKQRVAIA 146 (211)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHcCcHhhhc-----CCcccCCHHHHHHHHHH
Confidence 00 0011234567889999987665 44567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCe
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQ 223 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~ 223 (1262)
|||+.+|++++|||||+|||+.++..+.+.|+++++ + +++|++++|+.+++...||++++|++|+
T Consensus 147 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 147 GVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999998754 3 4567778999999999999999999985
No 372
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.98 E-value=3.5e-32 Score=305.56 Aligned_cols=192 Identities=23% Similarity=0.298 Sum_probs=156.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeecccc--CCCCCCCHHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHD--NHIGEMTVRETLAFSA 72 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+.+.+||+||+.+..
T Consensus 39 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 115 (265)
T TIGR02769 39 TVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPL 115 (265)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999998 999999999875432 235699999986 4667899999998754
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-ccccccccCCcccccccccch
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVGDEMIRGISGGQKK 151 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkq 151 (1262)
..... . ...+.+++++++++.+||. +..+ ..+..|||||||
T Consensus 116 ~~~~~-----~----------------------------~~~~~~~~~~~~l~~~gl~~~~~~-----~~~~~LSgGe~q 157 (265)
T TIGR02769 116 RHLTS-----L----------------------------DESEQKARIAELLDMVGLRSEDAD-----KLPRQLSGGQLQ 157 (265)
T ss_pred HHhcC-----C----------------------------CHHHHHHHHHHHHHHcCCChhhhh-----CChhhCCHHHHH
Confidence 31100 0 0001123467789999996 5555 455679999999
Q ss_pred hhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 152 RVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 152 RvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
|++|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+.+..+||++++|++|++++.|+++
T Consensus 158 rv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (265)
T TIGR02769 158 RINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQA-FGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVA 236 (265)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHH
Confidence 999999999999999999999999999999999999987543 2456777899999999999999999999999999988
Q ss_pred hHH
Q 000838 232 LVL 234 (1262)
Q Consensus 232 ~~~ 234 (1262)
++.
T Consensus 237 ~~~ 239 (265)
T TIGR02769 237 QLL 239 (265)
T ss_pred HHc
Confidence 763
No 373
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=99.98 E-value=3.7e-32 Score=299.16 Aligned_cols=183 Identities=25% Similarity=0.309 Sum_probs=149.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-------cceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-------QRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|+.||+.++..
T Consensus 38 ~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~ 114 (228)
T PRK10584 38 TIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPAL 114 (228)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHH
Confidence 47999999999999999999999988 9999999998754321 2469999999988899999999988653
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.++.. ..+.+++++++++.+||.+..+. .+..||||||||+
T Consensus 115 ~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~Ge~qrl 155 (228)
T PRK10584 115 LRGES----------------------------------SRQSRNGAKALLEQLGLGKRLDH-----LPAQLSGGEQQRV 155 (228)
T ss_pred hcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhhC-----ChhhCCHHHHHHH
Confidence 22100 00112346778999999876663 4567999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEe
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQ 227 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~ 227 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++ ..+|++++|++|++++.
T Consensus 156 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~-~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 156 ALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNRE-HGTTLILVTHDLQLA-ARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999987543 245666788888877 45999999999998753
No 374
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=5e-32 Score=305.05 Aligned_cols=190 Identities=21% Similarity=0.303 Sum_probs=155.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccC-CCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDN-HIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++. +++..|+++|+.+.....+
T Consensus 37 ~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~ 113 (269)
T PRK13648 37 WTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENHA 113 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhcC
Confidence 47999999999999999999999988 999999999875432 2457999999974 6778899999988654221
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. .++..+.++++++.+|+.+..+ ..++.||||||||++||
T Consensus 114 ~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 114 VP----------------------------------YDEMHRRVSEALKQVDMLERAD-----YEPNALSGGQKQRVAIA 154 (269)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHcCCchhhh-----CCcccCCHHHHHHHHHH
Confidence 10 0011234567899999987666 44567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
||++.+|++++|||||+|||+.++..+.+.|+++.+ ..+++|++++|+.+++.. ||++++|++|++++.|+++++.
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~ 230 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKS-EHNITIISITHDLSEAME-ADHVIVMNKGTVYKEGTPTEIF 230 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCchHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999998654 334566778888888875 9999999999999999987764
No 375
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=99.98 E-value=4.6e-32 Score=297.22 Aligned_cols=182 Identities=24% Similarity=0.343 Sum_probs=154.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCCCCCCHHHHHHHHHhccCCCcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTR 80 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .+.++|++|++.+++.+|++||+.+.....+.
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~~--- 100 (223)
T TIGR03740 28 VYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARENLKVHTTLLGL--- 100 (223)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHHHHHHHHHHHcCC---
Confidence 47999999999999999999999988 999999998875432 25799999999888889999999876532210
Q ss_pred hhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHHh
Q 000838 81 YDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMMV 160 (1262)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al~ 160 (1262)
.+..+.++++.+||++..| ..+..||||||||++||||++
T Consensus 101 -----------------------------------~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~~rv~laral~ 140 (223)
T TIGR03740 101 -----------------------------------PDSRIDEVLNIVDLTNTGK-----KKAKQFSLGMKQRLGIAIALL 140 (223)
T ss_pred -----------------------------------CHHHHHHHHHHcCCcHHHh-----hhHhhCCHHHHHHHHHHHHHh
Confidence 0123566789999987666 345679999999999999999
Q ss_pred cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 161 GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 161 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++.+.||++++|++|++++.|++.
T Consensus 141 ~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 209 (223)
T TIGR03740 141 NHPKLLILDEPTNGLDPIGIQELRELIRSFPE-Q-GITVILSSHILSEVQQLADHIGIISEGVLGYQGKIN 209 (223)
T ss_pred cCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChh
Confidence 99999999999999999999999999998643 3 456777899999999999999999999999998864
No 376
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.4e-31 Score=299.36 Aligned_cols=203 Identities=24% Similarity=0.256 Sum_probs=161.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCe---eEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~---~~G~i~~~g 768 (1262)
.+.++|+++.+. ++.+++|+||++++||+++|+||||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 466788887763 2469999999999999999999999999999999999865322 379999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 839 (1262)
.+... ..+++.++|++|++.+++.+|+.||+.+...... ....+...+.++++++.+++.+ ..++.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87532 1345679999999999999999999987643221 1122333455667777776642 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||++. .+.+.+|+++
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~ 218 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTS 218 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999975 4556678753
No 377
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=99.98 E-value=5.1e-32 Score=333.17 Aligned_cols=204 Identities=25% Similarity=0.270 Sum_probs=167.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 477889988763 3469999999999999999999999999999999999876 4589999999876
Q ss_pred Ccc----cccceEEEecCCCCCCCCCCHHHHHHHHHHhh----cCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000838 772 KHE----TFARISGYCEQNDIHSPFVTVHESLAFSAWLR----LAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 772 ~~~----~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 843 (1262)
... ..++.++|++|++.+++.+||+||+.++.... .....+.++.+++++++++.+|+.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 421 12356999999999999999999998753211 0000122334456889999999988777764 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. .+.+..|+++
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~ 216 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYT 216 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEE
Confidence 79999999999999999999999999999999999999999999999877999999999974 4556677753
No 378
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.98 E-value=3.8e-32 Score=301.91 Aligned_cols=196 Identities=19% Similarity=0.306 Sum_probs=157.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc----ccceEEeeccccCCCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV----PQRTAAYISQHDNHIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~ 106 (242)
T TIGR03411 30 LRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDK 106 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhccc
Confidence 47999999999999999999999988 999999998875432 13469999999999999999999998643110
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
..+.. ... ...++.+.+++++++.+|+++..+. .++.|||||||||+||
T Consensus 107 --~~~~~------------~~~------------~~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~Ge~qrv~la 155 (242)
T TIGR03411 107 --SVFAS------------LFF------------RLSAEEKDRIEEVLETIGLADEADR-----LAGLLSHGQKQWLEIG 155 (242)
T ss_pred --ccccc------------ccc------------ccHHHHHHHHHHHHHHcCCchhhcC-----ChhhCCHHHHHHHHHH
Confidence 00000 000 0000123356788999999876664 4567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
|||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+++.+.||++++|++|++++.|+.+++
T Consensus 156 ral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 156 MLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQV 229 (242)
T ss_pred HHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHH
Confidence 999999999999999999999999999999998643 3 5677789999999999999999999999999987765
No 379
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=2e-31 Score=301.44 Aligned_cols=200 Identities=23% Similarity=0.260 Sum_probs=162.5
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEC
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSIKIS 767 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~~~ 767 (1262)
..+.++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|...+ .+.+|+|.++
T Consensus 38 ~~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~ 104 (285)
T PRK14254 38 TVIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFR 104 (285)
T ss_pred ceEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEEC
Confidence 3578999988763 24699999999999999999999999999999999998642 1358999999
Q ss_pred CccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000838 768 GYPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVG 838 (1262)
Q Consensus 768 g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~ 838 (1262)
|.+... ...++.++|++|++.+++. |+.||+.+....+. ... ..+++++++++.+++.+ ..+..
T Consensus 105 G~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~-- 177 (285)
T PRK14254 105 GKNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS-- 177 (285)
T ss_pred CEEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC--
Confidence 987531 2346789999999888875 99999988654332 122 23455888999999853 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 839 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 839 ~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+..||||||||++|||||+.+|+||||||||+|||+.++..+.+.|+++++ ++|||+++|++. .+....|+.
T Consensus 178 ---~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri 249 (285)
T PRK14254 178 ---GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKT 249 (285)
T ss_pred ---cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEE
Confidence 457999999999999999999999999999999999999999999999976 489999999975 455667773
No 380
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=4.6e-32 Score=299.16 Aligned_cols=191 Identities=24% Similarity=0.388 Sum_probs=158.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|+.||+.++....+..
T Consensus 27 ~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~- 102 (235)
T cd03299 27 YFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKRKVD- 102 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHHHHHHHHHcCCC-
Confidence 47999999999999999999999998 999999999875432 2457999999998998999999998864322100
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..+..+.+.++++.+||.+..++ .++.||||||||++||||+
T Consensus 103 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~laral 144 (235)
T cd03299 103 ---------------------------------KKEIERKVLEIAEMLGIDHLLNR-----KPETLSGGEQQRVAIARAL 144 (235)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCChhHHhc-----CcccCCHHHHHHHHHHHHH
Confidence 00112245678899999877764 4567999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
+.+|++++|||||+|||+.++..+++.|++++... ++++++++|+.+++.+.||++++|++|++++.|+.++..
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 218 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEF-GVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVF 218 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 99999999999999999999999999999875432 456777889999999999999999999999999877653
No 381
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=99.98 E-value=1.2e-31 Score=299.52 Aligned_cols=200 Identities=22% Similarity=0.267 Sum_probs=160.5
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC--eeEEEEEECC
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGSIKISG 768 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~--~~~G~i~~~g 768 (1262)
..+.++|+++.++ +.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 3578899987761 24899999999999999999999999999999999987631 1689999999
Q ss_pred ccCCccc-ccceEEEecCCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCC
Q 000838 769 YPKKHET-FARISGYCEQNDI--HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP---LRQSLVGLPGV 842 (1262)
Q Consensus 769 ~~~~~~~-~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---~~~~~~~~~~~ 842 (1262)
.++.... .++.++|++|++. +.+..|+.+++.+...... ... .++.++++++.+++.+ ..++. +
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 8764322 2357999999974 4466899998876433221 111 2245788999999976 23443 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|++
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v 211 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDV 211 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEE
Confidence 579999999999999999999999999999999999999999999998764 899999999975 355567774
No 382
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=2.4e-32 Score=309.16 Aligned_cols=193 Identities=24% Similarity=0.334 Sum_probs=156.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccC-CCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDN-HIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++. .++..||+||+.|+....+
T Consensus 35 ~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~ 114 (282)
T PRK13640 35 WTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRA 114 (282)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCC
Confidence 47999999999999999999999886111299999999875432 2457999999974 6778999999988643221
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
. ..++..++++++++.+||++..+ ..++.||||||||++||
T Consensus 115 ~----------------------------------~~~~~~~~~~~~l~~~~L~~~~~-----~~~~~LS~G~~qrv~la 155 (282)
T PRK13640 115 V----------------------------------PRPEMIKIVRDVLADVGMLDYID-----SEPANLSGGQKQRVAIA 155 (282)
T ss_pred C----------------------------------CHHHHHHHHHHHHHHCCChhHhc-----CCcccCCHHHHHHHHHH
Confidence 1 00112345677899999987666 45678999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++ ..||++++|++|++++.|+++++.
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~-~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKK-NNLTVISITHDIDEA-NMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999987543 245667788888887 579999999999999999988764
No 383
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.5e-32 Score=307.65 Aligned_cols=190 Identities=24% Similarity=0.330 Sum_probs=156.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC----cccceEEeeccccC-CCCCCCHHHHHHHHHhcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF----VPQRTAAYISQHDN-HIGEMTVRETLAFSARCQ 75 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~----~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~ 75 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .+...||.||+.|+....
T Consensus 38 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~ 114 (280)
T PRK13633 38 FLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL 114 (280)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc
Confidence 47999999999999999999999998 99999999987542 22467999999863 233569999999865432
Q ss_pred CCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHH
Q 000838 76 GVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTT 155 (1262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsi 155 (1262)
+.. ..+.+++++++++.+||++..++ .+..||||||||++|
T Consensus 115 ~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~LS~G~~qrv~l 155 (280)
T PRK13633 115 GIP----------------------------------PEEIRERVDESLKKVGMYEYRRH-----APHLLSGGQKQRVAI 155 (280)
T ss_pred CCC----------------------------------HHHHHHHHHHHHHHCCCHhHhhC-----CcccCCHHHHHHHHH
Confidence 110 01123346788999999887774 446799999999999
Q ss_pred HHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 156 GEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 156 A~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
||+|+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.. ||++++|++|++++.|+++++.
T Consensus 156 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 156 AGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999999987543 34566778999888875 9999999999999999988765
No 384
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.98 E-value=4.6e-32 Score=303.19 Aligned_cols=191 Identities=29% Similarity=0.441 Sum_probs=156.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++....+.
T Consensus 30 ~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 106 (258)
T PRK13548 30 VVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHGL 106 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccCC
Confidence 47999999999999999999999988 999999998875422 235699999998887889999999885432110
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
. .++.++.++++++.+||.+..++ .+..|||||||||+|||
T Consensus 107 --~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgGe~qrv~la~ 147 (258)
T PRK13548 107 --S--------------------------------RAEDDALVAAALAQVDLAHLAGR-----DYPQLSGGEQQRVQLAR 147 (258)
T ss_pred --C--------------------------------cHHHHHHHHHHHHHcCCHhHhcC-----CcccCCHHHHHHHHHHH
Confidence 0 00112345678999999876664 45679999999999999
Q ss_pred HHh------cCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 158 MMV------GPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 158 al~------~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
||+ .+|++++|||||+|||+.++..+.+.|+++++.. +++|++++|+.+++..+||++++|++|++++.|+++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 226 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPA 226 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHH
Confidence 999 5999999999999999999999999999875333 456777899999999999999999999999999877
Q ss_pred hHH
Q 000838 232 LVL 234 (1262)
Q Consensus 232 ~~~ 234 (1262)
++.
T Consensus 227 ~~~ 229 (258)
T PRK13548 227 EVL 229 (258)
T ss_pred HHh
Confidence 653
No 385
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.4e-31 Score=301.56 Aligned_cols=206 Identities=23% Similarity=0.268 Sum_probs=164.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
.+.++|+++.++ .+.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 578899998874 356999999999999999999999999999999999986531 3589999999
Q ss_pred ccCCc----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000838 769 YPKKH----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNG 844 (1262)
Q Consensus 769 ~~~~~----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 844 (1262)
.+... ...++.++|++|++.+++ .|+.||+.+...... ..+.++.++.+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87532 234567999999998887 899999987643221 12333444456788899998653221111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 845 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 845 lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
||||||||++|||+|+.+|++++|||||+|||+.+++.+.+.|+++.+ ++|||+++|++. ++.+..|+.+
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~ 233 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAA 233 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEE
Confidence 999999999999999999999999999999999999999999999876 589999999975 5666778753
No 386
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.4e-31 Score=298.73 Aligned_cols=205 Identities=20% Similarity=0.242 Sum_probs=160.4
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
.+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 467888887763 245999999999999999999999999999999999986532 1369999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 843 (1262)
.+... ...++.++|++|++.+++. |+.||+.+....+.. ...+..++.++++++.+++.+...... ...+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNL-HKSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHh-hCCcc
Confidence 87532 2346789999999988875 999999986543311 112223445777888888753211111 11245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+..|+.
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i 216 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWT 216 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEE
Confidence 799999999999999999999999999999999999999999999985 5899999999875 345566775
No 387
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=99.98 E-value=2.3e-32 Score=297.56 Aligned_cols=185 Identities=24% Similarity=0.360 Sum_probs=147.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCC--CCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHI--GEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~--~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++. ..++.++|++|++.+. +.+||+||+.++......
T Consensus 27 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv~e~l~~~~~~~~~- 100 (213)
T cd03235 27 FLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISVRDVVLMGLYGHKG- 100 (213)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCcHHHHHHhccccccc-
Confidence 47999999999999999999999988 999999998764 2345799999997653 347999999885431100
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
.+.. ..++.+++++++++.+||++..+. .+..||||||||++||||
T Consensus 101 -~~~~----------------------------~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrv~la~a 146 (213)
T cd03235 101 -LFRR----------------------------LSKADKAKVDEALERVGLSELADR-----QIGELSGGQQQRVLLARA 146 (213)
T ss_pred -cccC----------------------------CCHHHHHHHHHHHHHcCCHHHHhC-----CcccCCHHHHHHHHHHHH
Confidence 0000 000112346778999999876664 455799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
|+.+|++++|||||+|||+.++..+.+.|++.++ . ++++++++|+.+++.+.||++++|++| +++.|
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 147 LVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999998754 3 456777899999999999999999886 55544
No 388
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.2e-32 Score=306.78 Aligned_cols=189 Identities=24% Similarity=0.361 Sum_probs=155.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc----ccceEEeeccccC-CCCCCCHHHHHHHHHhcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV----PQRTAAYISQHDN-HIGEMTVRETLAFSARCQ 75 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~ 75 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++..|++||+.++....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~ 106 (274)
T PRK13644 30 YIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL 106 (274)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc
Confidence 47999999999999999999999988 999999999875432 2457999999864 466789999998865322
Q ss_pred CCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHH
Q 000838 76 GVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTT 155 (1262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsi 155 (1262)
+.. ..+..+.++++++.+||++..++ .+..||||||||++|
T Consensus 107 ~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~-----~~~~LS~G~~qrv~l 147 (274)
T PRK13644 107 CLP----------------------------------PIEIRKRVDRALAEIGLEKYRHR-----SPKTLSGGQGQCVAL 147 (274)
T ss_pred CCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcC-----CcccCCHHHHHHHHH
Confidence 100 01112346778999999887764 456799999999999
Q ss_pred HHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 156 GEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 156 A~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
||||+.+|+++||||||+|||+.++..+++.|+++.+ . +++|++++|+.+++ ..||++++|++|++++.|+++++.
T Consensus 148 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l~~G~i~~~g~~~~~~ 223 (274)
T PRK13644 148 AGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVMDRGKIVLEGEPENVL 223 (274)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999999998653 3 45677789999888 569999999999999999987753
No 389
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.7e-31 Score=299.38 Aligned_cols=207 Identities=21% Similarity=0.246 Sum_probs=164.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
.+.++|+++.+. .+.+|+|+||++++||+++|+|+||||||||+++|+|..++. ..+|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 578899988773 235899999999999999999999999999999999986532 1369999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 843 (1262)
.+... ...++.++|++|++.+++ .|+.||+.+....... .+..+.++.+.++++.+++.+..+.... ..+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIH-KSAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhc-CCcc
Confidence 87521 234567999999988887 8999999876432211 1222334567889999988542211111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.||||||||++|||+|+++|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||++. ++.+.+|+++
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~ 222 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTA 222 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEE
Confidence 7999999999999999999999999999999999999999999999865 4899999999985 5677788853
No 390
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.9e-31 Score=302.13 Aligned_cols=202 Identities=21% Similarity=0.280 Sum_probs=161.4
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~~~g 768 (1262)
.+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578899988763 2459999999999999999999999999999999999642 1 12589999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN----PLRQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~ 839 (1262)
.++.. ..+++.++|++|++.+++. |+.||+.+....+.. .+....++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1345679999999988874 999999986543211 12223345577888888874 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|+++
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~ 252 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTM 252 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999975 4556778753
No 391
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.4e-31 Score=299.12 Aligned_cols=201 Identities=25% Similarity=0.258 Sum_probs=161.5
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
.+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 477889988763 246999999999999999999999999999999999975421 2479999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL----RQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~----~~~~~~~ 839 (1262)
.+... ...++.++|++|++.+++. ||+||+.+....+.. ......++.+.++++.+++.+. .++.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87532 2345679999999988874 999999987544321 1223334557788888887532 2332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+..|+.
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v 218 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYT 218 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEE
Confidence 457999999999999999999999999999999999999999999999875 689999999975 355677875
No 392
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.7e-32 Score=306.46 Aligned_cols=190 Identities=27% Similarity=0.363 Sum_probs=155.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-----cccceEEeeccccC-CCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDN-HIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .++..|+.||+.+....
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~ 105 (271)
T PRK13638 29 VTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRN 105 (271)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHH
Confidence 47999999999999999999999998 99999999987421 12357999999864 24556899999886432
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.+.. ..+..+.++++++.+||.+..++ .+..||||||||++
T Consensus 106 ~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrl~ 146 (271)
T PRK13638 106 LGVP----------------------------------EAEITRRVDEALTLVDAQHFRHQ-----PIQCLSHGQKKRVA 146 (271)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhcC-----CchhCCHHHHHHHH
Confidence 2110 00112345678999999877664 45679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|+++||||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 147 laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 147 IAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-Q-GNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVF 224 (271)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999998753 3 456777899999999999999999999999999987654
No 393
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.5e-31 Score=298.76 Aligned_cols=202 Identities=25% Similarity=0.298 Sum_probs=161.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--C-eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~--~-~~~G~i~~~g 768 (1262)
.+.++|+++.+. .+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 467899988763 24699999999999999999999999999999999997641 1 2589999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 839 (1262)
.+... ...++.++|++|++.+++ .|++||+.+....+. ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 134567999999988876 799999987643321 1122333455788899999852 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+.+||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||++||++. ++.+..|+++
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~ 217 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTA 217 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEE
Confidence 457999999999999999999999999999999999999999999999854 789999999975 4566678753
No 394
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=5.4e-32 Score=306.84 Aligned_cols=190 Identities=21% Similarity=0.320 Sum_probs=153.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-------cccceEEeeccccC-CCCCCCHHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-------VPQRTAAYISQHDN-HIGEMTVRETLAFSA 72 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~ 72 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .+...||+||+.++.
T Consensus 35 ~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~ 111 (280)
T PRK13649 35 YTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQLFEETVLKDVAFGP 111 (280)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhhhccccHHHHHHHHH
Confidence 47999999999999999999999998 99999999887532 12457999999862 233479999998865
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcc-cccccccCCcccccccccch
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDN-CADILVGDEMIRGISGGQKK 151 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqkq 151 (1262)
...+.. .++..+.++++++.+||.+ ..+ +.+..|||||||
T Consensus 112 ~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~~LSgG~~q 152 (280)
T PRK13649 112 QNFGVS----------------------------------QEEAEALAREKLALVGISESLFE-----KNPFELSGGQMR 152 (280)
T ss_pred HHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhh-----CCcccCCHHHHH
Confidence 322110 0011234567888999963 444 455679999999
Q ss_pred hhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 152 RVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 152 RvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
|++|||||+.+|+++||||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++.+.||++++|++|++++.|+++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPK 230 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998753 3 456777899999999999999999999999999987
Q ss_pred hHH
Q 000838 232 LVL 234 (1262)
Q Consensus 232 ~~~ 234 (1262)
++.
T Consensus 231 ~~~ 233 (280)
T PRK13649 231 DIF 233 (280)
T ss_pred HHh
Confidence 763
No 395
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=5e-32 Score=285.49 Aligned_cols=164 Identities=31% Similarity=0.409 Sum_probs=141.4
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ ++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 4677776653 2469999999999999999999999999999999999876 458999999987532
Q ss_pred -----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000838 774 -----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTE 848 (1262)
Q Consensus 774 -----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 848 (1262)
..+++.++|++|++.+++.+|++|++.+. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23457899999999888889999887531 8999
Q ss_pred HHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 849 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 849 qrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||||++||+||+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+..|+.
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i 171 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRV 171 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 999999999999999999999999999999999999999999877 899999999974 344456654
No 396
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=4.5e-32 Score=303.68 Aligned_cols=195 Identities=18% Similarity=0.308 Sum_probs=153.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCC--ceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSL--KVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~--~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|..+|.. ..+|+|.++|.++... ..++.++|++|++.+++ +|++||+.++..
T Consensus 40 ~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~ 118 (258)
T PRK14268 40 VTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPR 118 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHH
Confidence 479999999999999999999987410 1289999999887432 12457999999988777 899999998654
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
..+.. ..+.++.++++++.+|+.+...... ++.+..|||||||||
T Consensus 119 ~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgG~~qrv 163 (258)
T PRK14268 119 IHGAN----------------------------------KKDLDGVVENALRSAALWDETSDRL-KSPALSLSGGQQQRL 163 (258)
T ss_pred HcCCC----------------------------------HHHHHHHHHHHHHHcCCCcchhhhh-cCChhhCCHHHHHHH
Confidence 32110 0011224567788888842211111 245568999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++. ++ ++|++++|+.+++.++||++++|++|++++.|+++++
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~--~~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK--KD-YTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--hC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999863 23 5677789999999999999999999999999998776
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 241 ~ 241 (258)
T PRK14268 241 F 241 (258)
T ss_pred h
Confidence 3
No 397
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.98 E-value=2.3e-32 Score=342.93 Aligned_cols=192 Identities=24% Similarity=0.371 Sum_probs=150.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
.+||+||||||||||+++|+|++ |+ +|+|.+||.++.+.. .++.++||+|++.+| +.|++|||.++...
T Consensus 378 ~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF-~~TI~eNI~~g~~~--- 449 (588)
T PRK11174 378 RIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLP-HGTLRDNVLLGNPD--- 449 (588)
T ss_pred EEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCC-CcCHHHHhhcCCCC---
Confidence 37999999999999999999999 77 899999999987654 357899999999776 46999999986310
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
...+...+++ +. ...++.+ -.|++..||.||++ ..+||||||||++|||
T Consensus 450 -~~~eei~~al---------------------~~------a~l~~~i--~~lp~G~dT~vge~-G~~LSGGQrQRialAR 498 (588)
T PRK11174 450 -ASDEQLQQAL---------------------EN------AWVSEFL--PLLPQGLDTPIGDQ-AAGLSVGQAQRLALAR 498 (588)
T ss_pred -CCHHHHHHHH---------------------HH------hCHHHHH--HhcccccccccccC-CCCCCHHHHHHHHHHH
Confidence 0011111111 00 0011222 24677889999965 5679999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|++++|+|++||||||+||+.++..+.+.|++.. +++|+ ++++|+. +..+.||+|++|++|++++.|+++++.+
T Consensus 499 All~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~Tv-IiItHrl-~~i~~aD~Iivl~~G~i~e~G~~~eL~~ 572 (588)
T PRK11174 499 ALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTT-LMVTHQL-EDLAQWDQIWVMQDGQIVQQGDYAELSQ 572 (588)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEE-EEEecCh-HHHHhCCEEEEEeCCeEeecCCHHHHHh
Confidence 9999999999999999999999999999998753 34455 4566665 4556799999999999999999998864
No 398
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=99.98 E-value=1e-31 Score=329.93 Aligned_cols=205 Identities=23% Similarity=0.313 Sum_probs=166.3
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 45788887763 34699999999999999999999999999999999998754235899999998764
Q ss_pred cc----cccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCC
Q 000838 773 HE----TFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAP-EVDSETRKMFIEEIMELVELNPLR-QSLVGLPGVNGLS 846 (1262)
Q Consensus 773 ~~----~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~lS 846 (1262)
.. ..++.+||++|++.+++.+||.||+.+....+... ....++.+++++++++.+++.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 21 12456999999998899999999998864322111 122333455688999999997654 343 34799
Q ss_pred HHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 847 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 847 gGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|+++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~ 212 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTIC 212 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999878999999999975 4556678753
No 399
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=4e-32 Score=300.84 Aligned_cols=186 Identities=21% Similarity=0.370 Sum_probs=153.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC---cccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF---VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++... ..++.++|++|++.+++ .||+||+.++...++
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~- 105 (241)
T PRK14250 31 IYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLKG- 105 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhcC-
Confidence 47999999999999999999999988 99999999887532 22457999999987776 699999987432110
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-ccccccccCCcccccccccchhhHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
..+.++.++++.+||+ +..+ +.+..||||||||++||
T Consensus 106 -------------------------------------~~~~~~~~~l~~~~l~~~~~~-----~~~~~LS~G~~qrl~la 143 (241)
T PRK14250 106 -------------------------------------EKNVDVEYYLSIVGLNKEYAT-----RDVKNLSGGEAQRVSIA 143 (241)
T ss_pred -------------------------------------cHHHHHHHHHHHcCCCHHHhh-----CCcccCCHHHHHHHHHH
Confidence 0012355678889996 4444 45668999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++|++++|+.+++.+.||++++|++|+++..|+++++.
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (241)
T PRK14250 144 RTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKM-NLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFF 220 (241)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhC-CCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999865422 456777899999999999999999999999999887753
No 400
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=99.98 E-value=9.1e-32 Score=329.90 Aligned_cols=204 Identities=29% Similarity=0.345 Sum_probs=168.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 467889988763 2469999999999999999999999999999999999876 4589999999875
Q ss_pred Cc----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 772 KH----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
.. ..+++.++|++|++.+++.+||.||+.+....+.....+..+.+++++++++.+|+.+..+..+ ..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCH
Confidence 32 1235679999999989999999999988532111111223344556889999999987666653 47999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++....|+++
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~ 211 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAIT 211 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEE
Confidence 9999999999999999999999999999999999999999999877999999999975 4556677753
No 401
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.6e-32 Score=301.98 Aligned_cols=189 Identities=24% Similarity=0.318 Sum_probs=154.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCC------C---cccceEEeeccccCCCCCCCHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGE------F---VPQRTAAYISQHDNHIGEMTVRETLAFS 71 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~------~---~~~~~~~yv~Q~~~~~~~lTv~e~l~f~ 71 (1262)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.. . ..++.++|++|++.+++.+||.||+.+.
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~ 106 (242)
T PRK11124 30 TLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEA 106 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHH
Confidence 47999999999999999999999988 9999999987631 1 1245799999999899999999999753
Q ss_pred H-hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccc
Q 000838 72 A-RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQK 150 (1262)
Q Consensus 72 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqk 150 (1262)
. ...+.. ..+....++++++.+||++..+. .+..||||||
T Consensus 107 ~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~-----~~~~LS~G~~ 147 (242)
T PRK11124 107 PCRVLGLS----------------------------------KDQALARAEKLLERLRLKPYADR-----FPLHLSGGQQ 147 (242)
T ss_pred HHHHcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHH
Confidence 2 111100 00112346778999999876664 4567999999
Q ss_pred hhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 151 KRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 151 qRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . ++++++++|+..++.+.+|++++|.+|++++.|++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~ 225 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVARKTASRVVYMENGHIVEQGDA 225 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999998643 3 45677789999999999999999999999999987
Q ss_pred chH
Q 000838 231 ELV 233 (1262)
Q Consensus 231 ~~~ 233 (1262)
++.
T Consensus 226 ~~~ 228 (242)
T PRK11124 226 SCF 228 (242)
T ss_pred HHh
Confidence 653
No 402
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.98 E-value=1e-32 Score=268.45 Aligned_cols=180 Identities=24% Similarity=0.316 Sum_probs=154.5
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----------------ccccce
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH----------------ETFARI 779 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----------------~~~~~~ 779 (1262)
+...+|++||+..+.|+.+.|+|.|||||||+|+||.-... +..|.|.+||..+.. ...|..
T Consensus 17 G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~ 94 (256)
T COG4598 17 GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTR 94 (256)
T ss_pred ccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHH
Confidence 45679999999999999999999999999999999987655 458999999975421 112345
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHH
Q 000838 780 SGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVEL 859 (1262)
Q Consensus 780 ~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al 859 (1262)
.|+|+|+.++++.+||.||+.-+..-- ...++.+..++++..|..+|+.+.++.+ +..|||||+||++|||||
T Consensus 95 L~mVFQ~FNLWsHmtvLeNViEaPvhV--Lg~~k~ea~e~Ae~~L~kVGi~ek~~~Y-----P~~LSGGQQQR~aIARaL 167 (256)
T COG4598 95 LGMVFQHFNLWSHMTVLENVIEAPVHV--LGVSKAEAIERAEKYLAKVGIAEKADAY-----PAHLSGGQQQRVAIARAL 167 (256)
T ss_pred hhHhhhhcchhHHHHHHHHHHhcchHh--hcCCHHHHHHHHHHHHHHhCchhhhhcC-----ccccCchHHHHHHHHHHH
Confidence 799999999999999999987543211 1345566677789999999999988876 457999999999999999
Q ss_pred hhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCC
Q 000838 860 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 904 (1262)
Q Consensus 860 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~ 904 (1262)
+.+|+++++|||||.|||+-.-++.+.+++++++|+|.+++||..
T Consensus 168 ameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM 212 (256)
T COG4598 168 AMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEM 212 (256)
T ss_pred hcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeeh
Confidence 999999999999999999999999999999999999999999975
No 403
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=2.1e-31 Score=297.90 Aligned_cols=204 Identities=18% Similarity=0.179 Sum_probs=162.7
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEC
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKIS 767 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~ 767 (1262)
..+..+++++.+ +++.+|+|+||++++||+++|+|+||||||||+++|+|...+. +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFY-------------GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEe-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 456667776655 2357999999999999999999999999999999999986531 258999999
Q ss_pred CccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000838 768 GYPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGV 842 (1262)
Q Consensus 768 g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 842 (1262)
|.+... ..+++.++|++|++.++ .+|+.||+.+....+. . ....++.++++++.+++.+..+.... ...
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCc
Confidence 987532 23456799999998877 5999999998754332 1 12234568889999998653322211 134
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+.||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|+|+++|++. ++.+..|++
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v 218 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTT 218 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEE
Confidence 6799999999999999999999999999999999999999999999985 4799999999975 466777875
No 404
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=99.98 E-value=1.4e-31 Score=292.61 Aligned_cols=180 Identities=27% Similarity=0.338 Sum_probs=147.4
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEecCCCCCCCCCCH
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKHETFARISGYCEQNDIHSPFVTV 795 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv 795 (1262)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 45679999999999999999999999999999999999876 458999999976421 1112234567999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCC
Q 000838 796 HESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 875 (1262)
Q Consensus 796 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgL 875 (1262)
+||+.+....+. .+....++.++++++.+++.+..++.+ .+||||||||++|||+|+.+|++++|||||+||
T Consensus 102 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999988654321 223344456788999999988777654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 876 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 876 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|+.++..+.+.|++++++|+|||++||++. ++.+..|+.
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i 212 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRA 212 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEE
Confidence 999999999999998777899999999974 344556654
No 405
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=9.3e-32 Score=303.39 Aligned_cols=190 Identities=27% Similarity=0.372 Sum_probs=156.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-----cccceEEeeccccC-CCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDN-HIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .+...||.||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~ 106 (275)
T PRK13639 30 MVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLN 106 (275)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHH
Confidence 47999999999999999999999988 99999999987421 12457999999863 33457999999876432
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.+. . ..+..+++.++++.+||++..++ .++.||||||||++
T Consensus 107 ~~~--~--------------------------------~~~~~~~~~~~l~~~~L~~~~~~-----~~~~LS~Gq~qrv~ 147 (275)
T PRK13639 107 LGL--S--------------------------------KEEVEKRVKEALKAVGMEGFENK-----PPHHLSGGQKKRVA 147 (275)
T ss_pred cCC--C--------------------------------HHHHHHHHHHHHHHCCCchhhcC-----ChhhCCHHHHHHHH
Confidence 110 0 00112346678999999887764 45579999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 148 laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 148 IAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVF 225 (275)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999998753 3 466777999999999999999999999999999988764
No 406
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.7e-31 Score=300.86 Aligned_cols=202 Identities=21% Similarity=0.246 Sum_probs=161.1
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~~~g 768 (1262)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 578999998773 2469999999999999999999999999999999999642 1 13589999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 839 (1262)
.+... ...++.++|++|++.+++. |+.||+.+...... .......++.++++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87532 1345679999999988874 99999987643221 1112223445777888888852 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||++. ++.+.+|+++
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~ 234 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTA 234 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999975 4666778753
No 407
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=6.1e-32 Score=310.04 Aligned_cols=196 Identities=20% Similarity=0.294 Sum_probs=156.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSS--LKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+|||||||||||++|+|+.++. ...+|+|.++|.++... ..++.++||+|++.++ ..|++||+.|+..
T Consensus 110 ~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~-~~ti~eNi~~~~~ 188 (329)
T PRK14257 110 VTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPF-EMSIFDNVAYGPR 188 (329)
T ss_pred EEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccC-CCcHHHHHHhHHH
Confidence 47999999999999999999998631 01289999999998531 2356799999998777 5799999998653
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
..+... .+..++.++.+++.++|.+..++.++ +.+.+||||||||+
T Consensus 189 ~~~~~~---------------------------------~~~~~~~~~~~l~~~~L~~~l~~~~~-~~~~~LSgGqkqRl 234 (329)
T PRK14257 189 NNGIND---------------------------------RKILEKIVEKSLKSAALWDEVKDDLD-KAGNALSGGQQQRL 234 (329)
T ss_pred hcCCCh---------------------------------HHHHHHHHHHHHHHcCCcchhhhhhh-CCcccCCHHHHHHH
Confidence 321100 00012234566788887654445554 56778999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|+|++|||||+|||+.+...+.+.|+++.+ + .++++++|+...+.+.||||++|++|++++.|+++++
T Consensus 235 ~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l 311 (329)
T PRK14257 235 CIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTI 311 (329)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999988642 3 5677799999999999999999999999999999987
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 312 ~ 312 (329)
T PRK14257 312 F 312 (329)
T ss_pred h
Confidence 4
No 408
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=99.98 E-value=7.1e-32 Score=297.69 Aligned_cols=185 Identities=23% Similarity=0.287 Sum_probs=151.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC--cccceEEeec-cccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF--VPQRTAAYIS-QHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~-Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++ |++.+++.+|++||+.+....++.
T Consensus 49 ~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~ 125 (236)
T cd03267 49 IVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDL 125 (236)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999988 99999999875321 2345799997 556777899999999886543221
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
. .++..+.++.+++.+||++..|+. +..||||||||++||+
T Consensus 126 ~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrl~la~ 166 (236)
T cd03267 126 P----------------------------------PARFKKRLDELSELLDLEELLDTP-----VRQLSLGQRMRAEIAA 166 (236)
T ss_pred C----------------------------------HHHHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHHHHHHHH
Confidence 0 001123456788899998877754 4579999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
||+.+|++++|||||+|||+.++..+.+.|+++++. ++.+|++++|+.+++.+.||++++|++|++++.|
T Consensus 167 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 167 ALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRE-RGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999987543 3456777899999999999999999999998765
No 409
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=99.98 E-value=1e-31 Score=329.50 Aligned_cols=197 Identities=21% Similarity=0.302 Sum_probs=166.5
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++ ++.+|+|+||++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478899998773 2469999999999999999999999999999999999876 4589999999875
Q ss_pred Ccc---c-ccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 772 KHE---T-FARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 772 ~~~---~-~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
... . .++.+||++|++.+++.+||.||+.+... . ....+++++++++.+++.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 321 1 23468999999999999999999987531 1 1223456788999999987777664 47999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. .+.+.+|+++
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~ 211 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRIS 211 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEE
Confidence 9999999999999999999999999999999999999999999878999999999975 4556778753
No 410
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=4.1e-32 Score=308.86 Aligned_cols=191 Identities=20% Similarity=0.297 Sum_probs=153.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCC--------CcccceEEeeccccC-CCCCCCHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGE--------FVPQRTAAYISQHDN-HIGEMTVRETLAFS 71 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~--------~~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~ 71 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. ...++.++|++|++. .+...|++||+.++
T Consensus 39 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~ 115 (289)
T PRK13645 39 VTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFG 115 (289)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHH
Confidence 47999999999999999999999988 9999999988642 112457999999863 23346999999986
Q ss_pred HhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-ccccccccCCcccccccccc
Q 000838 72 ARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVGDEMIRGISGGQK 150 (1262)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqk 150 (1262)
....+. . .++..+.++++++.++|+ +..+ +.+..||||||
T Consensus 116 ~~~~~~--~--------------------------------~~~~~~~~~~ll~~~~L~~~~~~-----~~~~~LS~Gq~ 156 (289)
T PRK13645 116 PVNLGE--N--------------------------------KQEAYKKVPELLKLVQLPEDYVK-----RSPFELSGGQK 156 (289)
T ss_pred HHHcCC--C--------------------------------HHHHHHHHHHHHHHcCCChhHhc-----CChhhCCHHHH
Confidence 532210 0 001123456788899995 4555 44567999999
Q ss_pred hhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 151 KRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 151 qRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.+.||++++|++|++++.|+.
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSP 235 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999987543 345677789999999999999999999999999998
Q ss_pred chHH
Q 000838 231 ELVL 234 (1262)
Q Consensus 231 ~~~~ 234 (1262)
+++.
T Consensus 236 ~~~~ 239 (289)
T PRK13645 236 FEIF 239 (289)
T ss_pred HHHh
Confidence 7653
No 411
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.98 E-value=8.6e-33 Score=273.83 Aligned_cols=194 Identities=24% Similarity=0.375 Sum_probs=168.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc---cceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+|+++|||||||||||.+++++++.+ +|+|+++|.++..... .+.++..-|+...-..+||+|-+.||.--...
T Consensus 29 iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~rlTV~dLv~FGRfPYSq 105 (252)
T COG4604 29 ITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILKQENHINSRLTVRDLVGFGRFPYSQ 105 (252)
T ss_pred eeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHHhhchhhheeEHHHHhhcCCCcccC
Confidence 58999999999999999999999988 9999999999876543 25678899998888899999999997532111
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
+ + ...|.+..+++.++.++|++..| ++..+||||||||.-||.
T Consensus 106 G----------------------R----------lt~eD~~~I~~aieyl~L~~l~d-----ryLd~LSGGQrQRAfIAM 148 (252)
T COG4604 106 G----------------------R----------LTKEDRRIINEAIEYLHLEDLSD-----RYLDELSGGQRQRAFIAM 148 (252)
T ss_pred C----------------------C----------CchHHHHHHHHHHHHhcccchHH-----HhHHhcccchhhhhhhhe
Confidence 1 0 12234567899999999999887 677889999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
.++++.+.++||||.+.||...+.++++.|++++++-++|+|+ +.||...+..++|+|+-|++|+++.+|+++++.+
T Consensus 149 VlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Ktivi-VlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii~ 225 (252)
T COG4604 149 VLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVV-VLHDINFASCYSDHIVALKNGKVVKQGSPDEIIQ 225 (252)
T ss_pred eeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEE-EEecccHHHhhhhheeeecCCEEEecCCHHHhcC
Confidence 9999999999999999999999999999999999877766555 6799999999999999999999999999998763
No 412
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=99.98 E-value=5.9e-32 Score=314.97 Aligned_cols=193 Identities=27% Similarity=0.354 Sum_probs=162.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccC--CCC---cccceEEeecccc--CCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNM--GEF---VPQRTAAYISQHD--NHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~--~~~---~~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+|+||||||||.++|+|+.+|+ +|+|.++|.+. +.. ..++.+-+|+|++ .+.|.+||+++|.....
T Consensus 319 ~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~ 395 (539)
T COG1123 319 TLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLR 395 (539)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHh
Confidence 47999999999999999999999998 99999999872 111 1235677888874 68899999999998765
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.++.. ...+.+++++++++..||+.. ..++++++||||||||+
T Consensus 396 ~~~~~---------------------------------~~~~~~~rv~~ll~~VgL~~~----~l~ryP~elSGGQrQRv 438 (539)
T COG1123 396 IHGGG---------------------------------SGAERRARVAELLELVGLPPE----FLDRYPHELSGGQRQRV 438 (539)
T ss_pred hhccc---------------------------------chHHHHHHHHHHHHHcCCCHH----HHhcCchhcCcchhHHH
Confidence 44211 012234568899999999852 23488999999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|+++++|||||+||+.++.++.++|+++.++ -+.+.+.|+||...+...||||+||++|++++.|+.+++
T Consensus 439 aIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e-~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v 517 (539)
T COG1123 439 AIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEE-LGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKV 517 (539)
T ss_pred HHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHH-hCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999998654 456778899999999999999999999999999988877
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 518 ~ 518 (539)
T COG1123 518 F 518 (539)
T ss_pred h
Confidence 4
No 413
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=5.6e-32 Score=302.54 Aligned_cols=192 Identities=23% Similarity=0.322 Sum_probs=152.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCC--ceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSL--KVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~--~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.+++ +||+||+.++..
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~ 113 (254)
T PRK14273 35 ITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPK 113 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHH
Confidence 479999999999999999999998620 1289999999886421 22467999999987774 899999998654
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc----ccccccccCCccccccccc
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD----NCADILVGDEMIRGISGGQ 149 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~----~~~~t~vg~~~~~~LSGGq 149 (1262)
..+. ++ ..+.++.++++++.+++. +..+ ..++.|||||
T Consensus 114 ~~~~---~~------------------------------~~~~~~~~~~~l~~~~l~~~l~~~~~-----~~~~~LSgG~ 155 (254)
T PRK14273 114 IHGT---KD------------------------------KKKLDEIVEQSLKKSALWNEVKDKLN-----TNALSLSGGQ 155 (254)
T ss_pred hcCC---CC------------------------------HHHHHHHHHHHHHHhCCchhhHHHHh-----CCcccCCHHH
Confidence 3210 00 001123456677788873 3344 3456899999
Q ss_pred chhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecC
Q 000838 150 KKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 229 (1262)
Q Consensus 150 kqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~ 229 (1262)
|||++|||||+.+|++++|||||+|||+.++..+.+.|+++. ++ ++|++++|+.+++.+.|||+++|++|+++..|+
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 232 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--ES-YTIIIVTHNMQQAGRISDRTAFFLNGCIEEESS 232 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999873 23 567778999999999999999999999999999
Q ss_pred cchHH
Q 000838 230 RELVL 234 (1262)
Q Consensus 230 ~~~~~ 234 (1262)
++++.
T Consensus 233 ~~~~~ 237 (254)
T PRK14273 233 TDELF 237 (254)
T ss_pred HHHHH
Confidence 88764
No 414
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=1e-31 Score=296.02 Aligned_cols=191 Identities=24% Similarity=0.315 Sum_probs=158.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc-ccceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV-PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+||||||||||+++|+|.++|+ +|+|+++|.++.... .++.++|++|++.+++.+|++||+.++...++..
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~~~- 103 (232)
T cd03300 28 FFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKKLP- 103 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcHHHHHHHHHHhcCCC-
Confidence 47999999999999999999999998 999999999875432 2457999999998888899999998865432110
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
.......++.+++.+||.+..++ .+..||||||||++|||||
T Consensus 104 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~lS~G~~qrl~laral 145 (232)
T cd03300 104 ---------------------------------KAEIKERVAEALDLVQLEGYANR-----KPSQLSGGQQQRVAIARAL 145 (232)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCchhhcC-----ChhhCCHHHHHHHHHHHHH
Confidence 00012245678899999877764 4467999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
+.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|++++|+..++.+.||++++|++|++++.|+.++..
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~-~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~ 219 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKEL-GITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIY 219 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHH
Confidence 99999999999999999999999999999875422 456666889989999999999999999999999876653
No 415
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=7.4e-32 Score=289.93 Aligned_cols=163 Identities=42% Similarity=0.741 Sum_probs=139.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC---CCCceeEEEEECCccCCCC--cccceEEeeccccCCCCCCCHHHHHHHHHhcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD---SSLKVSGRVTYNGHNMGEF--VPQRTAAYISQHDNHIGEMTVRETLAFSARCQ 75 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~---~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~ 75 (1262)
+++|+||||||||||+++|+|+++ |+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++....
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~ 111 (202)
T cd03233 35 MVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK 111 (202)
T ss_pred EEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc
Confidence 479999999999999999999998 66 99999999987543 23467999999998999999999998753210
Q ss_pred CCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHH
Q 000838 76 GVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTT 155 (1262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsi 155 (1262)
.++.+..||||||||++|
T Consensus 112 --------------------------------------------------------------~~~~~~~LS~Ge~qrl~l 129 (202)
T cd03233 112 --------------------------------------------------------------GNEFVRGISGGERKRVSI 129 (202)
T ss_pred --------------------------------------------------------------cccchhhCCHHHHHHHHH
Confidence 113445799999999999
Q ss_pred HHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEec
Q 000838 156 GEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQG 228 (1262)
Q Consensus 156 A~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G 228 (1262)
||||+.+|++++|||||+|||+.++..+.+.|+++.+..+.++++++||+.+++.+.||++++|++|++++.|
T Consensus 130 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 130 AEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred HHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999999999999999999999998755334566777788788999999999999999998765
No 416
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=8e-32 Score=300.71 Aligned_cols=198 Identities=22% Similarity=0.293 Sum_probs=156.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCCC---cccceEEeeccccCCCCCCCHHHHHHHHHhcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSS--LKVSGRVTYNGHNMGEF---VPQRTAAYISQHDNHIGEMTVRETLAFSARCQ 75 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~--~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~ 75 (1262)
+++|+||||||||||+++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+++.+||+||+.++....
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~ 110 (250)
T PRK14247 31 ITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLN 110 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhc
Confidence 47999999999999999999998741 01389999999987542 22467999999988888999999999865422
Q ss_pred CCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHH
Q 000838 76 GVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTT 155 (1262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsi 155 (1262)
+.... ..+..+.++++++.+||.+..+.. -+..+.+||||||||++|
T Consensus 111 ~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~LSgG~~qrv~l 157 (250)
T PRK14247 111 RLVKS--------------------------------KKELQERVRWALEKAQLWDEVKDR-LDAPAGKLSGGQQQRLCI 157 (250)
T ss_pred cccCC--------------------------------HHHHHHHHHHHHHHcCCCcchhhh-hcCCcccCCHHHHHHHHH
Confidence 10000 001123466788999986421111 124566899999999999
Q ss_pred HHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 156 GEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 156 A~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
||||+.+|++++|||||+|||+.++..+.+.|+++. . ++++++++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 158 aral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 158 ARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--K-DMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999999999999999863 2 356777899999999999999999999999999987763
No 417
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=2.9e-31 Score=296.53 Aligned_cols=201 Identities=23% Similarity=0.298 Sum_probs=159.8
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--CC-eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~~~g 768 (1262)
.+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 467889988763 2469999999999999999999999999999999999743 21 2479999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 839 (1262)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87531 234567999999998887 6999999886543221 112222344667788887642 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||++. .+.+..|++
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i 217 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKT 217 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEE
Confidence 457999999999999999999999999999999999999999999999865 589999999975 466677875
No 418
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=6.8e-32 Score=311.26 Aligned_cols=202 Identities=17% Similarity=0.191 Sum_probs=157.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCC-ceeEEEEECCccCCCCcc-------cceEEeeccccC--CCCCCCHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSL-KVSGRVTYNGHNMGEFVP-------QRTAAYISQHDN--HIGEMTVRETLAF 70 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~-~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~--~~~~lTv~e~l~f 70 (1262)
+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++. +.|.+||.+++.+
T Consensus 35 ~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~ 114 (330)
T PRK15093 35 IRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQ 114 (330)
T ss_pred EEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHH
Confidence 479999999999999999999986310 138999999998754321 246999999975 6788999999986
Q ss_pred HHhccCC-CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCccccccccc
Q 000838 71 SARCQGV-GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQ 149 (1262)
Q Consensus 71 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1262)
....... +..+. ...+.++++.++++.+||.+..+ .-++++..|||||
T Consensus 115 ~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~L~~~gL~~~~~--~~~~~p~~LSgG~ 163 (330)
T PRK15093 115 NIPGWTYKGRWWQ-----------------------------RFGWRKRRAIELLHRVGIKDHKD--AMRSFPYELTEGE 163 (330)
T ss_pred HHHhhhccccccc-----------------------------cHHHHHHHHHHHHHHCCCCChHH--HHhCCchhCCHHH
Confidence 4321100 00000 00012345678899999975322 1135677899999
Q ss_pred chhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecC
Q 000838 150 KKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 229 (1262)
Q Consensus 150 kqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~ 229 (1262)
||||+|||||+.+|++|++||||+|||+.++.++++.|+++.+ +.+.+|++++|+...+.++||+|++|++|++++.|+
T Consensus 164 ~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~tii~itHdl~~v~~~~dri~vm~~G~ive~g~ 242 (330)
T PRK15093 164 CQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQ-NNNTTILLISHDLQMLSQWADKINVLYCGQTVETAP 242 (330)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999999999998754 335677889999999999999999999999999999
Q ss_pred cchHH
Q 000838 230 RELVL 234 (1262)
Q Consensus 230 ~~~~~ 234 (1262)
.+++.
T Consensus 243 ~~~i~ 247 (330)
T PRK15093 243 SKELV 247 (330)
T ss_pred HHHHH
Confidence 88764
No 419
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=99.98 E-value=2e-31 Score=299.49 Aligned_cols=210 Identities=24% Similarity=0.303 Sum_probs=164.5
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+.... ..+ ...++.+++|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 66788887764100 000 0013569999999999999999999999999999999999876 45899999998653
Q ss_pred c------ccccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000838 773 H------ETFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVN 843 (1262)
Q Consensus 773 ~------~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~ 843 (1262)
. ...++.++|++|++ .+.+..|+.|++.+..... ...........++++++.+|+. +..+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 2 12456799999997 3567799999987643211 1123334455688999999996 455554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.||||||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++ |+|+|++||++. ++.+..|+.+
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~ 223 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVM 223 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEE
Confidence 79999999999999999999999999999999999999999999998765 899999999975 4555677743
No 420
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.9e-31 Score=298.95 Aligned_cols=201 Identities=19% Similarity=0.202 Sum_probs=160.6
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEC
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKIS 767 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~ 767 (1262)
..+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 4688999998763 246999999999999999999999999999999999975421 247999999
Q ss_pred CccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000838 768 GYPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVG 838 (1262)
Q Consensus 768 g~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~ 838 (1262)
|.+... ..+++.++|++|++.+++. |+.||+.+....+. .. ...++.+++.++.+++.+ ..++.
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 158 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK-- 158 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC--
Confidence 987531 2345689999999888874 99999987643321 11 122344667788888742 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 839 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 839 ~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+..|+.+
T Consensus 159 ---~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~ 231 (274)
T PRK14265 159 ---GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTA 231 (274)
T ss_pred ---cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999865 789999999985 4667778753
No 421
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=99.97 E-value=4.5e-32 Score=295.42 Aligned_cols=180 Identities=22% Similarity=0.352 Sum_probs=148.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh-c
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR-C 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~-~ 74 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|++||+.++.. .
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~ 104 (213)
T cd03262 28 VVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKV 104 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHh
Confidence 47999999999999999999999988 99999999887421 124679999999988888999999988642 1
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
++. . .++..+.++++++.+||++..+ +.+..||||||||++
T Consensus 105 ~~~--~--------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv~ 145 (213)
T cd03262 105 KGM--S--------------------------------KAEAEERALELLEKVGLADKAD-----AYPAQLSGGQQQRVA 145 (213)
T ss_pred cCC--C--------------------------------HHHHHHHHHHHHHHcCCHhHhh-----hCccccCHHHHHHHH
Confidence 110 0 0011234567889999987666 345679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeE
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQI 224 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i 224 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|++++|+.+++.+.||++++|++|++
T Consensus 146 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 146 IARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999998754 3 45567789999999999999999999974
No 422
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=8.1e-32 Score=301.25 Aligned_cols=198 Identities=21% Similarity=0.317 Sum_probs=155.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCC--C---cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSS--LKVSGRVTYNGHNMGE--F---VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~--~~~~G~v~~~g~~~~~--~---~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|.++|+ ...+|+|.++|.++.. . ..++.++|++|++.+++.+||.||+.++..
T Consensus 32 ~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~ 111 (253)
T PRK14267 32 VFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVK 111 (253)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999762 0138999999998752 1 224579999999989999999999998654
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.++.... .++....++++++.+||.+...... ++.+..||||||||+
T Consensus 112 ~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv 158 (253)
T PRK14267 112 LNGLVKS--------------------------------KKELDERVEWALKKAALWDEVKDRL-NDYPSNLSGGQRQRL 158 (253)
T ss_pred hcCccCC--------------------------------HHHHHHHHHHHHHHcCCccchhhhh-ccChhhCCHHHHHHH
Confidence 3211000 0011223566788888753211111 245678999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+++...||++++|++|++++.|+++++
T Consensus 159 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (253)
T PRK14267 159 VIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKV 235 (253)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998642 3 5677789999999999999999999999999998765
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 236 ~ 236 (253)
T PRK14267 236 F 236 (253)
T ss_pred H
Confidence 3
No 423
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=99.97 E-value=6.5e-32 Score=295.65 Aligned_cols=197 Identities=26% Similarity=0.401 Sum_probs=156.9
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.+.. ..+.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 567888876531 12458999999999999999999999999999999999876 45899999998653
Q ss_pred c---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCC
Q 000838 773 H---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVG------LPGVN 843 (1262)
Q Consensus 773 ~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~------~~~~~ 843 (1262)
. ...++.++|++|++.+++ .|+.||+.+... ... ++.+.++++.+++.+..+..+. .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 234567999999998776 699999976321 111 1235677888888776655321 11245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ +|||++||++.. .+..|+.
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~--~~~~d~v 208 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPSL--LDLVDRI 208 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHHH--HHhCCEE
Confidence 79999999999999999999999999999999999999999999998764 899999999863 3677764
No 424
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.97 E-value=1.1e-31 Score=336.86 Aligned_cols=197 Identities=25% Similarity=0.370 Sum_probs=163.2
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.+. +++.+|+|+|++++|||.+||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3689999986542 1246999999999999999999999999999999999987 4 47999999987
Q ss_pred CC---cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000838 771 KK---HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-------LRQSLVGLP 840 (1262)
Q Consensus 771 ~~---~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~ 840 (1262)
++ ...+++.++||+|++.++. -|++||+.++. ++.+++ +++++++..++.+ -.|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~e----ei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASDE----QLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCHH----HHHHHHHHhCHHHHHHhcccccccccccC
Confidence 64 3467789999999999886 59999998752 223333 3566677666654 346667654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
..+||||||||++|||||+++|+||+||||||+||+.+++.+.+.|+++. +++|+|++||+++ ....+|+++
T Consensus 483 -G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Ii 554 (588)
T PRK11174 483 -AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIW 554 (588)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEE
Confidence 45799999999999999999999999999999999999999999999885 5899999999984 667888864
No 425
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.3e-31 Score=298.58 Aligned_cols=204 Identities=19% Similarity=0.225 Sum_probs=159.9
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~g 768 (1262)
.+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 477899988763 246999999999999999999999999999999999975311 2579999999
Q ss_pred ccCC-----cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000838 769 YPKK-----HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 769 ~~~~-----~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 843 (1262)
.+.. ....++.++|++|++.+++ .|+.||+.+....+. .. ...++.++++++.+++.+..+... ...+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKL-KQSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHh-cCCcc
Confidence 8752 1234567999999988887 599999988653321 11 122344667788888753211111 11245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+.+|++.
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~ 221 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTA 221 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEE
Confidence 7999999999999999999999999999999999999999999999875 589999999975 5677778753
No 426
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=99.97 E-value=8.6e-32 Score=302.56 Aligned_cols=192 Identities=21% Similarity=0.241 Sum_probs=155.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccC--CCCCCCHHHHHHHHHhcc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDN--HIGEMTVRETLAFSARCQ 75 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~--~~~~lTv~e~l~f~~~~~ 75 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++.+|+.|++.+.....
T Consensus 41 ~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~ 117 (267)
T PRK15112 41 TLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLN 117 (267)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhc
Confidence 47999999999999999999999998 999999998875321 1346999999864 567889999998865432
Q ss_pred CCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-ccccccccCCcccccccccchhhH
Q 000838 76 GVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
.. . ...+..+.++++++.+||. +..+ ..+..|||||||||+
T Consensus 118 ~~---~------------------------------~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~~LS~G~~qrv~ 159 (267)
T PRK15112 118 TD---L------------------------------EPEQREKQIIETLRQVGLLPDHAS-----YYPHMLAPGQKQRLG 159 (267)
T ss_pred cC---C------------------------------CHHHHHHHHHHHHHHcCCChHHHh-----cCchhcCHHHHHHHH
Confidence 10 0 0001123467789999994 5555 345679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|+|++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++..+||++++|++|++++.|+++++.
T Consensus 160 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 160 LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEK-QGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADVL 238 (267)
T ss_pred HHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHh
Confidence 999999999999999999999999999999999987543 3456777899999999999999999999999999877653
No 427
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.5e-31 Score=299.32 Aligned_cols=201 Identities=21% Similarity=0.224 Sum_probs=159.5
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~~~g 768 (1262)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 578999998763 2358999999999999999999999999999999999754 1 13589999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELN----PLRQSLVGL 839 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~ 839 (1262)
.+... ..+++.++|++|++.+++ .|+.||+.+....+. ..+.+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87531 234567999999988887 599999988653321 112222334467777777543 223332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. .+.+..|+.
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i 236 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKT 236 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEE
Confidence 457999999999999999999999999999999999999999999999865 799999999975 455667774
No 428
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=6.8e-32 Score=303.28 Aligned_cols=194 Identities=22% Similarity=0.322 Sum_probs=156.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|+.||+.++.....
T Consensus 39 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~- 114 (265)
T PRK10575 39 VTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWH- 114 (265)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCccccc-
Confidence 47999999999999999999999988 999999998864322 23579999999888889999999987531100
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
. .... ...+.+++++.+++.+||++..++ .+..|||||||||+|||
T Consensus 115 ~-~~~~----------------------------~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrv~lar 160 (265)
T PRK10575 115 G-ALGR----------------------------FGAADREKVEEAISLVGLKPLAHR-----LVDSLSGGERQRAWIAM 160 (265)
T ss_pred c-cccC----------------------------CCHHHHHHHHHHHHHcCCHHHhcC-----CcccCCHHHHHHHHHHH
Confidence 0 0000 000112346778999999876664 44579999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
||+.+|+|+||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+.||++++|++|++++.|+.+++
T Consensus 161 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~-~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~ 235 (265)
T PRK10575 161 LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQE-RGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEL 235 (265)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHh
Confidence 999999999999999999999999999999987543 245677789999999999999999999999999987765
No 429
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.7e-32 Score=302.83 Aligned_cols=195 Identities=22% Similarity=0.359 Sum_probs=157.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++..|++||+.++..-..
T Consensus 35 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~- 110 (265)
T PRK10253 35 FTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQ- 110 (265)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCccccc-
Confidence 47999999999999999999999988 999999998875432 23569999999988888999999987421000
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
.... . ..+.....++++++.+||.+..+ +.+..||||||||++|||
T Consensus 111 -~~~~----------------~------------~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~Gq~qrv~lar 156 (265)
T PRK10253 111 -PLFT----------------R------------WRKEDEEAVTKAMQATGITHLAD-----QSVDTLSGGQRQRAWIAM 156 (265)
T ss_pred -cccc----------------C------------CCHHHHHHHHHHHHHcCCHHHhc-----CCcccCChHHHHHHHHHH
Confidence 0000 0 00011234677899999987666 455689999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+..++.+.||++++|++|++++.|+++++.
T Consensus 157 al~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~-~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 157 VLAQETAIMLLDEPTTWLDISHQIDLLELLSELNRE-KGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999987542 2456777899999999999999999999999999987653
No 430
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=99.97 E-value=8.1e-32 Score=302.55 Aligned_cols=201 Identities=22% Similarity=0.319 Sum_probs=158.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCC--------cccceEEeeccccCCCCCCCHHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEF--------VPQRTAAYISQHDNHIGEMTVRETLAFSA 72 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~--------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~ 72 (1262)
+++|+||||||||||+++|+|.++|+...+|+|.++|.++... ..++.++|++|++.+++.+||+||+.++.
T Consensus 32 ~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~ 111 (262)
T PRK09984 32 MVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGA 111 (262)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhh
Confidence 4799999999999999999999987522359999999887432 11356999999998899999999998754
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchh
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKR 152 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 152 (1262)
..... .... ..+. ..++.+++++++++.+||++..|. .+..||||||||
T Consensus 112 ~~~~~---------~~~~--~~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qr 160 (262)
T PRK09984 112 LGSTP---------FWRT--CFSW---------------FTREQKQRALQALTRVGMVHFAHQ-----RVSTLSGGQQQR 160 (262)
T ss_pred ccccc---------chhh--hccc---------------ccHHHHHHHHHHHHHcCCHHHHhC-----CccccCHHHHHH
Confidence 21000 0000 0000 001123456788999999876664 455799999999
Q ss_pred hHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcch
Q 000838 153 VTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPREL 232 (1262)
Q Consensus 153 vsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~ 232 (1262)
|+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. ++++|++++|+.+++.+.||++++|++|++++.|++++
T Consensus 161 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~~ 239 (262)
T PRK09984 161 VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQ 239 (262)
T ss_pred HHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987543 34667778999999999999999999999999998765
Q ss_pred H
Q 000838 233 V 233 (1262)
Q Consensus 233 ~ 233 (1262)
.
T Consensus 240 ~ 240 (262)
T PRK09984 240 F 240 (262)
T ss_pred h
Confidence 3
No 431
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=8.7e-32 Score=301.00 Aligned_cols=192 Identities=23% Similarity=0.320 Sum_probs=152.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC-----CCCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD-----SSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAF 70 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~-----~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f 70 (1262)
+++|+|||||||||||++|+|..+ |+ +|+|.++|+++... ..++.++|++|++.+++ .||+||+.+
T Consensus 34 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~ 109 (253)
T PRK14242 34 VTALIGPSGCGKSTFLRCLNRMNDLIPGARV---EGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAY 109 (253)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccCCCCCC---ceEEEECCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHH
Confidence 479999999999999999999864 34 89999999887531 12457999999988877 599999998
Q ss_pred HHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccc
Q 000838 71 SARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQK 150 (1262)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqk 150 (1262)
+...++... .++.+++++++++.+||.+...... ++.++.||||||
T Consensus 110 ~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgGq~ 155 (253)
T PRK14242 110 GLRVNGVKD---------------------------------KAYLAERVERSLRHAALWDEVKDRL-HESALGLSGGQQ 155 (253)
T ss_pred HHHHcCCCC---------------------------------HHHHHHHHHHHHHHcCCchhhhHHh-hCCcccCCHHHH
Confidence 754321100 0001234566788888854221111 245678999999
Q ss_pred hhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 151 KRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 151 qRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
|||+|||||+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|++++|+.+++.+.||++++|++|++++.|++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~ 232 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--AR-YTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPT 232 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999863 23 5677789999999999999999999999999988
Q ss_pred chH
Q 000838 231 ELV 233 (1262)
Q Consensus 231 ~~~ 233 (1262)
+++
T Consensus 233 ~~~ 235 (253)
T PRK14242 233 EQI 235 (253)
T ss_pred HHH
Confidence 765
No 432
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.3e-31 Score=328.02 Aligned_cols=190 Identities=26% Similarity=0.312 Sum_probs=158.2
Q ss_pred eEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEecCCCCCCCCC
Q 000838 718 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH----ETFARISGYCEQNDIHSPFV 793 (1262)
Q Consensus 718 ~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~~~~~~l 793 (1262)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 569999999999999999999999999999999999876 458999999987532 12346799999999888999
Q ss_pred CHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCC
Q 000838 794 TVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 873 (1262)
Q Consensus 794 Tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPts 873 (1262)
||.||+.+..........+.++..++++++++.+++.+..++.+ .+|||||||||+||+||+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532111111123334456889999999987776654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 874 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 874 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||+.++..+.+.|++++++|+|||++||++. ++.+.+|++
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i 204 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEI 204 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEE
Confidence 99999999999999999878999999999975 455667774
No 433
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=99.97 E-value=1.2e-31 Score=296.14 Aligned_cols=191 Identities=25% Similarity=0.395 Sum_probs=158.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc-cceEEeeccccCCCCCCCHHHHHHHHHhccCCCc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP-QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 79 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|+.||+.+....++..
T Consensus 28 ~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~- 103 (237)
T TIGR00968 28 LVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRKHP- 103 (237)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHHHHHHhHHHhcCCC-
Confidence 47899999999999999999999988 9999999998754322 457999999998888899999998865432110
Q ss_pred chhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHHH
Q 000838 80 RYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEMM 159 (1262)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~al 159 (1262)
..+..+.++++++.+++.+..+. .+..||||||||++|||+|
T Consensus 104 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~lS~G~~qrl~laral 145 (237)
T TIGR00968 104 ---------------------------------KAKIKARVEELLELVQLEGLGDR-----YPNQLSGGQRQRVALARAL 145 (237)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCHhHhhC-----ChhhCCHHHHHHHHHHHHH
Confidence 00012235678899999876664 4457999999999999999
Q ss_pred hcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 160 VGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 160 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
+.+|++++|||||+|||+.++..+.+.|++..+ +.+.+|++++|+.+++.+.||++++|++|++++.|+.+++.
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 219 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVY 219 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999998644 32456677889989999999999999999999999987764
No 434
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=3e-32 Score=309.36 Aligned_cols=198 Identities=25% Similarity=0.370 Sum_probs=166.9
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.++++|++++++.+ +.++|+|+|+++++||.+||+|+||||||||++.|+|... +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 78999999999753 3469999999999999999999999999999999999766 4589999999886
Q ss_pred Cc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCC
Q 000838 772 KH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQS-------LVGLPG 841 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-------~~~~~~ 841 (1262)
.. ..+++.+++++|...++. -|+++||.++. ++.++ +.+.++++.+||++.... .+|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~AsD----Eel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDASD----EELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCCCH----HHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 43 346778899999887765 69999998752 23333 337889999999875443 4453 4
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 842 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 842 ~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.+.||||||||++|||+|++|.++++|||||.|||+.|.+++++.|.+.++ |+|+|++||+.. -.+.||+++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIi 543 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRII 543 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEE
Confidence 678999999999999999999999999999999999999999999988764 899999999876 567899854
No 435
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=99.97 E-value=5.2e-31 Score=294.67 Aligned_cols=206 Identities=24% Similarity=0.298 Sum_probs=160.5
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 478889987763 2469999999999999999999999999999999999631124689999999875
Q ss_pred Cc---ccccc-eEEEecCCCCCCCCCCHHHHHHHHHHhhcC----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000838 772 KH---ETFAR-ISGYCEQNDIHSPFVTVHESLAFSAWLRLA----PEVDSETRKMFIEEIMELVELN-PLRQSLVGLPGV 842 (1262)
Q Consensus 772 ~~---~~~~~-~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 842 (1262)
.. ...++ .++|++|++.+++.+|+.+++.+....... .+....+..++++++++.+++. +..++.++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 32 12222 478999999999999999998875432110 1112223345678899999997 34555432
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH-hhhh
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFES-FDEA 915 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-fd~~ 915 (1262)
.+||||||||++||+||+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||++.. +... .|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i 222 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYV 222 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEE
Confidence 2499999999999999999999999999999999999999999999998779999999999753 2223 4654
No 436
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=99.97 E-value=1.7e-31 Score=282.61 Aligned_cols=153 Identities=25% Similarity=0.431 Sum_probs=134.1
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEecCCC---CCCCC
Q 000838 720 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH----ETFARISGYCEQND---IHSPF 792 (1262)
Q Consensus 720 il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~~~ 792 (1262)
+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 7999999999999999999999999999999999876 458999999987542 12456799999984 57788
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCC
Q 000838 793 VTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 872 (1262)
Q Consensus 793 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPt 872 (1262)
+|++||+.+... ||+|||||++|||||+.+|++++|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999876310 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 873 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 873 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+|||+.++..+.+.|+++.++|+|+|+++|+++ ++.+..|+.
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v 174 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRI 174 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEE
Confidence 999999999999999999777899999999974 555666764
No 437
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1e-32 Score=273.24 Aligned_cols=182 Identities=26% Similarity=0.427 Sum_probs=158.9
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEecCCCCCCCC
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH---ETFARISGYCEQNDIHSPF 792 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ 792 (1262)
+.+.+|+|+|.++++|.+++++|||||||||||.++++... ..+|+|+++|.+... ....+.++..-|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 46789999999999999999999999999999999998776 458999999998643 4566778888999888889
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCC
Q 000838 793 VTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 872 (1262)
Q Consensus 793 lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPt 872 (1262)
+||+|-+.|+......... .++.+..++++++.++|.+..|+.. .+||||||||.-||+.++++.+.++||||.
T Consensus 90 lTV~dLv~FGRfPYSqGRl-t~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEPL 163 (252)
T COG4604 90 LTVRDLVGFGRFPYSQGRL-TKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDEPL 163 (252)
T ss_pred eEHHHHhhcCCCcccCCCC-chHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecCcc
Confidence 9999999997433222222 3445567999999999999998874 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCC
Q 000838 873 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPS 905 (1262)
Q Consensus 873 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~ 905 (1262)
++||.....++|+.||+++++ |+||+++.||.+
T Consensus 164 NNLDmkHsv~iMk~Lrrla~el~KtiviVlHDIN 197 (252)
T COG4604 164 NNLDMKHSVQIMKILRRLADELGKTIVVVLHDIN 197 (252)
T ss_pred cccchHHHHHHHHHHHHHHHHhCCeEEEEEeccc
Confidence 999999999999999999977 999999999986
No 438
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=99.97 E-value=3.2e-31 Score=296.40 Aligned_cols=201 Identities=25% Similarity=0.273 Sum_probs=158.9
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc-
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP- 770 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~- 770 (1262)
.+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccc
Confidence 467888887763 2358999999999999999999999999999999999876 458999999875
Q ss_pred ----CCc---c----cccceEEEecCCCC--CCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000838 771 ----KKH---E----TFARISGYCEQNDI--HSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-LRQSL 836 (1262)
Q Consensus 771 ----~~~---~----~~~~~~~~v~q~~~--~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~ 836 (1262)
... . ..++.++|++|++. +.+.+|+.||+.+..... .. ......++.++++++.+++.+ ..++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 321 1 12356899999974 345679999987542211 11 111233456788999999963 55554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhh
Q 000838 837 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 837 ~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. .+.+..|+.
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998764 899999999975 455567774
No 439
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=99.97 E-value=5.2e-32 Score=299.86 Aligned_cols=195 Identities=25% Similarity=0.384 Sum_probs=148.8
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHh
Confidence 46777776531 12458999999999999999999999999999999999876 458999999987532
Q ss_pred ---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHH-----HHHHHHHHc--CCcccccccccCCCCC
Q 000838 774 ---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKM-----FIEEIMELV--ELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 774 ---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~l--~l~~~~~~~~~~~~~~ 843 (1262)
..+++.++|++|++.+++ .||.||+.+... ........+ ..+++++.+ ++.+..+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CC
Confidence 234567999999987765 699999976421 111111110 112333333 333333332 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
+||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++ +|+|||++||++.. + +.+|+.
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~~-~-~~~d~v 206 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLST-V-KNADRI 206 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-HhCCEE
Confidence 799999999999999999999999999999999999999999999986 48999999999863 3 457764
No 440
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=99.97 E-value=2.4e-31 Score=295.16 Aligned_cols=186 Identities=26% Similarity=0.362 Sum_probs=154.7
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~~~-- 66 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVA--PDEGVIKRNGK-- 66 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCc--
Confidence 467888888763 2469999999999999999999999999999999999876 45899999872
Q ss_pred CcccccceEEEecCCCCCCCC--CCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000838 772 KHETFARISGYCEQNDIHSPF--VTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 772 ~~~~~~~~~~~v~q~~~~~~~--lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGq 849 (1262)
+.++|++|++.+++. .|+.+++.+. .... ++.+.++++.+|+.+..++.+ ..|||||
T Consensus 67 ------~~i~~v~q~~~~~~~l~~~~~~~~~~~------~~~~----~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq 125 (251)
T PRK09544 67 ------LRIGYVPQKLYLDTTLPLTVNRFLRLR------PGTK----KEDILPALKRVQAGHLIDAPM-----QKLSGGE 125 (251)
T ss_pred ------cCEEEeccccccccccChhHHHHHhcc------cccc----HHHHHHHHHHcCChHHHhCCh-----hhCCHHH
Confidence 358999999877765 3777776431 1111 234678999999988777653 4799999
Q ss_pred HHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhhc
Q 000838 850 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 850 rqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||++||+||+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||++||++. ++.+..|+++
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~ 192 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVL 192 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEE
Confidence 99999999999999999999999999999999999999998765 899999999975 5566778753
No 441
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=1.4e-30 Score=283.48 Aligned_cols=177 Identities=20% Similarity=0.302 Sum_probs=137.1
Q ss_pred CcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc
Q 000838 690 PHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGY 769 (1262)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 769 (1262)
|..+-++|+++.++ +.++++++++|-|.-...++|+||||.||||||++|.|...+ ..|+..-|
T Consensus 584 PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn-- 647 (807)
T KOG0066|consen 584 PPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN-- 647 (807)
T ss_pred CCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc--
Confidence 44566778887764 356789999999999999999999999999999999998774 35654322
Q ss_pred cCCcccccceEEEecCCC--CCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000838 770 PKKHETFARISGYCEQND--IHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLST 847 (1262)
Q Consensus 770 ~~~~~~~~~~~~~v~q~~--~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 847 (1262)
.+-.+|+..|.. .+-..-|+-|.|.-.. +.+.++ +...|-.+||...+++.- +..|||
T Consensus 648 ------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~F------Nlpyq~----ARK~LG~fGL~sHAHTik----ikdLSG 707 (807)
T KOG0066|consen 648 ------HRLRIGWFDQHANEALNGEETPVEYLQRKF------NLPYQE----ARKQLGTFGLASHAHTIK----IKDLSG 707 (807)
T ss_pred ------ceeeeechhhhhHHhhccccCHHHHHHHhc------CCChHH----HHHHhhhhhhhhccceEe----eeecCC
Confidence 233578877753 2334557777664221 122222 456788899998888763 568999
Q ss_pred HHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000838 848 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 905 (1262)
Q Consensus 848 Gqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 905 (1262)
|||-||++|.--++.|+||||||||++||..+...+.+.|++. ...||+++||.+
T Consensus 708 GQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeR 762 (807)
T KOG0066|consen 708 GQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDER 762 (807)
T ss_pred cchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccc
Confidence 9999999999999999999999999999999999998888775 457999999864
No 442
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.3e-31 Score=301.13 Aligned_cols=197 Identities=21% Similarity=0.340 Sum_probs=154.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSS--LKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+|||||||||||++|+|..+|. ...+|+|+++|.++... ..++.++|++|++.+++. ||.||+.++..
T Consensus 47 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~ 125 (267)
T PRK14235 47 VTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPR 125 (267)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHH
Confidence 47999999999999999999998741 01289999999887531 124579999999887774 99999998754
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.++.... ..+...+++++++.+||.+...... ++.+..||||||||+
T Consensus 126 ~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgGq~qrv 172 (267)
T PRK14235 126 IHGLARS--------------------------------KAELDEIVETSLRKAGLWEEVKDRL-HEPGTGLSGGQQQRL 172 (267)
T ss_pred hcccccc--------------------------------hHHHHHHHHHHHHHcCCchhhhHHh-hCCcccCCHHHHHHH
Confidence 3221000 0011234567888999964211111 245668999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+++...||++++|++|+++..|+.+++
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14235 173 CIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEKM 249 (267)
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998642 3 5677789999999999999999999999999988765
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 250 ~ 250 (267)
T PRK14235 250 F 250 (267)
T ss_pred H
Confidence 3
No 443
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=99.97 E-value=6.5e-32 Score=296.81 Aligned_cols=204 Identities=24% Similarity=0.335 Sum_probs=157.8
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.++.. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 10 ~~l~~~~l~~~~~~~----------~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~ 77 (226)
T cd03248 10 GIVKFQNVTFAYPTR----------PDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQ--PQGGQVLLDGKP 77 (226)
T ss_pred ceEEEEEEEEEeCCC----------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCcEEEECCCc
Confidence 357889999887421 12358999999999999999999999999999999999876 458999999986
Q ss_pred CCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHc--CCcccccccccCCCCCCC
Q 000838 771 KKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELV--ELNPLRQSLVGLPGVNGL 845 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l--~l~~~~~~~~~~~~~~~l 845 (1262)
... ...++.++|++|++.+++ .|+.||+.+...............+..++++++.+ |+.+..+.. +..|
T Consensus 78 ~~~~~~~~~~~~i~~~~q~~~l~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~-----~~~L 151 (226)
T cd03248 78 ISQYEHKYLHSKVSLVGQEPVLFA-RSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEK-----GSQL 151 (226)
T ss_pred hHHcCHHHHHhhEEEEecccHHHh-hhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcC-----CCcC
Confidence 532 234567999999988776 69999998643210000000011112256777777 676655554 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 846 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 846 SgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|+|++||+++. + +..|++
T Consensus 152 SgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~-~-~~~d~i 218 (226)
T cd03248 152 SGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPE-RRTVLVIAHRLST-V-ERADQI 218 (226)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEECCHHH-H-HhCCEE
Confidence 99999999999999999999999999999999999999999999865 6899999999863 3 447764
No 444
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.6e-31 Score=299.49 Aligned_cols=197 Identities=21% Similarity=0.318 Sum_probs=154.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCC--ceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSL--KVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~--~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+|||||||||||++|+|..+|.. ..+|+|.++|.++... ..++.++|++|++.+++.+||+||+.++..
T Consensus 32 ~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~ 111 (258)
T PRK14241 32 VTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLK 111 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHH
Confidence 479999999999999999999986410 1289999999887421 224579999999889999999999988654
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.++... .++.+++++++++.+||.+...... +..+.+|||||||||
T Consensus 112 ~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv 157 (258)
T PRK14241 112 LNGVRN---------------------------------KKDLDELVEKSLRGANLWNEVKDRL-DKPGGGLSGGQQQRL 157 (258)
T ss_pred hcCCCC---------------------------------HHHHHHHHHHHHHHcCCchhhhhHh-hCCcccCCHHHHHHH
Confidence 321000 0011234567788888842111111 245668999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEec------CCeEEEe
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLS------DGQIVYQ 227 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~------~G~i~~~ 227 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|++++ ++ ++|++++|+.+++.+.||++++|+ +|++++.
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 158 CIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELK--QD-YTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 99999999999999999999999999999999999874 23 567778999999999999999996 8999999
Q ss_pred cCcchHH
Q 000838 228 GPRELVL 234 (1262)
Q Consensus 228 G~~~~~~ 234 (1262)
|+++++.
T Consensus 235 ~~~~~~~ 241 (258)
T PRK14241 235 DDTEKIF 241 (258)
T ss_pred CCHHHHH
Confidence 9987763
No 445
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.3e-31 Score=294.13 Aligned_cols=205 Identities=22% Similarity=0.271 Sum_probs=160.1
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~~~g 768 (1262)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.+||
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 367888887763 2469999999999999999999999999999999999643 1 12589999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 843 (1262)
.+... ...++.++|++|++.+++. |+.||+.+...... ..+.+..++++.++++.+++.+....... ..+.
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLD-KSAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcc
Confidence 87532 2345679999999988875 99999987643221 11233345567888999988542211111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
.||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+..|+.
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i 215 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYT 215 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEE
Confidence 7999999999999999999999999999999999999999999999864 899999999975 455555553
No 446
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.5e-31 Score=298.36 Aligned_cols=195 Identities=18% Similarity=0.290 Sum_probs=153.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCC---CCCCCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGK---LDSSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSA 72 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~---~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~ 72 (1262)
+++|+||||||||||+++|+|. .++. ..+|+|.++|.++... ..++.++|++|++.+++ .|+.||+.++.
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~ 108 (250)
T PRK14245 31 VVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGL 108 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHH
Confidence 4799999999999999999997 3431 1289999999987532 12457999999987776 69999999865
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchh
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKR 152 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 152 (1262)
..++... .++.++.++++++.+||.+...... ++.+..||||||||
T Consensus 109 ~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qr 154 (250)
T PRK14245 109 RVNGVKD---------------------------------NAFIRQRVEETLKGAALWDEVKDKL-KESAFALSGGQQQR 154 (250)
T ss_pred HHcCCCc---------------------------------HHHHHHHHHHHHHHcCCCcchhhhh-hCCcccCCHHHHHH
Confidence 4321100 0001234567888899865322111 24567899999999
Q ss_pred hHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcch
Q 000838 153 VTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPREL 232 (1262)
Q Consensus 153 vsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~ 232 (1262)
++|||||+.+|++++|||||+|||+.++..+.+.|+++. ++ ++|++++|+.+++.+.||++++|++|++++.|++++
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~ 231 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--KD-YTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKK 231 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999863 33 567778999999999999999999999999999887
Q ss_pred HH
Q 000838 233 VL 234 (1262)
Q Consensus 233 ~~ 234 (1262)
+.
T Consensus 232 ~~ 233 (250)
T PRK14245 232 IF 233 (250)
T ss_pred Hh
Confidence 64
No 447
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.8e-31 Score=293.66 Aligned_cols=203 Identities=22% Similarity=0.264 Sum_probs=160.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC----eeEEEEEEC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG----YITGSIKIS 767 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~----~~~G~i~~~ 767 (1262)
.+.++++++++. ++.+|+|+||++++||+++|+||||||||||+++|+|...+. ...|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 467888887763 356999999999999999999999999999999999986532 122555555
Q ss_pred CccCC---cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000838 768 GYPKK---HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSLVGLP 840 (1262)
Q Consensus 768 g~~~~---~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 840 (1262)
|.+.. ....++.++|++|++.+++.+|+.||+.+...... ....++.++.++++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 55532 12345679999999999999999999988643321 1123334456888999999864 23332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+..||+|||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||++||++. .+.+.+|+.+
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~ 223 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVA 223 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999864 699999999975 4556777753
No 448
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.9e-31 Score=296.65 Aligned_cols=194 Identities=18% Similarity=0.272 Sum_probs=154.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC---CCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD---SSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~---~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.... .++.++|++|++.+++ .||+||+.++...
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~ 105 (246)
T PRK14269 30 ITALIGASGCGKSTFLRCFNRMNDKIAKI---DGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKL 105 (246)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCCCCC---ceEEEECCEecccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhh
Confidence 479999999999999999999975 45 899999999876432 2457999999988876 6999999986533
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
++.... ..+.+.+++++++.++|.+...... ++.++.||||||||++
T Consensus 106 ~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 106 HGMIKN--------------------------------KDEEEALVVDCLQKVGLFEEVKDKL-KQNALALSGGQQQRLC 152 (246)
T ss_pred cCcccC--------------------------------hHHHHHHHHHHHHHcCCChhhhHHh-cCCcccCCHHHHHHHH
Confidence 210000 0011234567889999953211111 2456789999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++. . ++++++++|+.+++.+.+|++++|++|++++.|+.+++.
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--H-NLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFF 229 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--C-CCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999998863 2 456777899999999999999999999999999987753
No 449
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.3e-31 Score=299.71 Aligned_cols=193 Identities=24% Similarity=0.356 Sum_probs=156.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|+.||+.++..-..
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~- 105 (255)
T PRK11231 30 ITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWL- 105 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhh-
Confidence 47999999999999999999999988 999999998764322 23569999999888888999999988531000
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
..+.. ...+..+.++++++.+||++..++ .+..||||||||++|||
T Consensus 106 -~~~~~----------------------------~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~lar 151 (255)
T PRK11231 106 -SLWGR----------------------------LSAEDNARVNQAMEQTRINHLADR-----RLTDLSGGQRQRAFLAM 151 (255)
T ss_pred -hhccC----------------------------CCHHHHHHHHHHHHHcCCHHHHcC-----CcccCCHHHHHHHHHHH
Confidence 00000 000112345678899999877664 45679999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
|++.+|++++|||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++.+.||++++|++|+++..|+.+++
T Consensus 152 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~-~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 225 (255)
T PRK11231 152 VLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-Q-GKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEV 225 (255)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHh
Confidence 99999999999999999999999999999988643 3 45677789999999999999999999999999987765
No 450
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=99.97 E-value=6.3e-31 Score=293.40 Aligned_cols=205 Identities=27% Similarity=0.305 Sum_probs=155.9
Q ss_pred EEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 000838 693 LIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK 772 (1262)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 772 (1262)
+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 45788887763 24699999999999999999999999999999999998421146899999998753
Q ss_pred c---cc-ccceEEEecCCCCCCCCCCHHHHHHHHHH-hhcC-C--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000838 773 H---ET-FARISGYCEQNDIHSPFVTVHESLAFSAW-LRLA-P--EVDSETRKMFIEEIMELVELN-PLRQSLVGLPGVN 843 (1262)
Q Consensus 773 ~---~~-~~~~~~~v~q~~~~~~~lTv~e~l~~~~~-~~~~-~--~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~ 843 (1262)
. .. .++.++|++|++.+++.+|+.+++.+... ++.. . .......++.++++++.+++. +..+..+ .+
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 2 11 23568999999988888887776653211 1100 0 011122345677889999985 3444432 13
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH-hhhh
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFES-FDEA 915 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-fd~~ 915 (1262)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++.. +... .|++
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~-~~~~~~d~i 216 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI-LDYIKPDYV 216 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHhhhCCEE
Confidence 699999999999999999999999999999999999999999999998778999999999752 2222 4654
No 451
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=99.97 E-value=2.6e-31 Score=295.71 Aligned_cols=196 Identities=22% Similarity=0.306 Sum_probs=154.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCC--CCCCceeEEEEECCccCCCCcc----cceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKL--DSSLKVSGRVTYNGHNMGEFVP----QRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~--~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|.. +|+ +|+|.++|.++..... +..++|++|++.+++.+|++||+.+....
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~ 104 (243)
T TIGR01978 28 IHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNA 104 (243)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHH
Confidence 47999999999999999999995 566 9999999998754321 23489999999999999999999886532
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcc-cccccccCCccc-ccccccchh
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDN-CADILVGDEMIR-GISGGQKKR 152 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~-~~~t~vg~~~~~-~LSGGqkqR 152 (1262)
..... .... ....+..++++++++.+||++ ..+. .+. +||||||||
T Consensus 105 ~~~~~------------------~~~~---------~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~~~LS~G~~qr 152 (243)
T TIGR01978 105 RRSAR------------------GEEP---------LDLLDFLKLLKAKLALLGMDEEFLNR-----SVNEGFSGGEKKR 152 (243)
T ss_pred hhccc------------------cccc---------ccHHHHHHHHHHHHHHcCCchhhccc-----ccccCcCHHHHHH
Confidence 11000 0000 000112235678899999974 4553 333 499999999
Q ss_pred hHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHh-ccceEEecCCeEEEecCcc
Q 000838 153 VTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNL-FDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 153 vsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~-~D~i~vl~~G~i~~~G~~~ 231 (1262)
++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++... ||++++|++|++++.|+++
T Consensus 153 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 153 NEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-P-DRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 9999999999999999999999999999999999998743 3 45677789999999888 8999999999999999887
Q ss_pred hH
Q 000838 232 LV 233 (1262)
Q Consensus 232 ~~ 233 (1262)
++
T Consensus 231 ~~ 232 (243)
T TIGR01978 231 LA 232 (243)
T ss_pred Hh
Confidence 54
No 452
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=99.97 E-value=1.8e-31 Score=298.71 Aligned_cols=193 Identities=25% Similarity=0.396 Sum_probs=156.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 29 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~- 104 (256)
T TIGR03873 29 LTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHR- 104 (256)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhh-
Confidence 47999999999999999999999988 999999998875432 23469999999877888999999988531000
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
..+ . ....+..+++.++++.+||.+..++ .+..||||||||++|||
T Consensus 105 -~~~-------------~---------------~~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~la~ 150 (256)
T TIGR03873 105 -SLW-------------A---------------GDSPHDAAVVDRALARTELSHLADR-----DMSTLSGGERQRVHVAR 150 (256)
T ss_pred -hhc-------------c---------------CCCHHHHHHHHHHHHHcCcHhhhcC-----CcccCCHHHHHHHHHHH
Confidence 000 0 0000112346778999999876664 45679999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
||+.+|++++|||||+|||+.++..+.+.|+++.+ + +++|++++|+.+++.+.||++++|++|++++.|+.++.
T Consensus 151 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 224 (256)
T TIGR03873 151 ALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREV 224 (256)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHh
Confidence 99999999999999999999999999999998643 3 45677789999999999999999999999999987765
No 453
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=8.1e-31 Score=299.54 Aligned_cols=207 Identities=24% Similarity=0.312 Sum_probs=162.2
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEECC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGSIKISG 768 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~~~g 768 (1262)
.+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 578999998763 24699999999999999999999999999999999997642 14589999999
Q ss_pred ccCCc-----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCC---------CCC-HHHHHHHHHHHHHHcCCcccc
Q 000838 769 YPKKH-----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAP---------EVD-SETRKMFIEEIMELVELNPLR 833 (1262)
Q Consensus 769 ~~~~~-----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~---------~~~-~~~~~~~~~~~l~~l~l~~~~ 833 (1262)
.++.. ...++.++|++|++.+++ .|++||+.+....+... ... .+..++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 134567999999988877 59999999864322100 011 122345678899999885322
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhh
Q 000838 834 QSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFD 913 (1262)
Q Consensus 834 ~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd 913 (1262)
+.... ..+.+||||||||++||+||+++|+||||||||+|||+.++..+.+.|+++++ +.|||++||++. .+.+..|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 11111 12467999999999999999999999999999999999999999999999876 589999999975 4566778
Q ss_pred hh
Q 000838 914 EA 915 (1262)
Q Consensus 914 ~~ 915 (1262)
+.
T Consensus 268 ~i 269 (305)
T PRK14264 268 QT 269 (305)
T ss_pred EE
Confidence 74
No 454
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1e-30 Score=293.85 Aligned_cols=203 Identities=21% Similarity=0.214 Sum_probs=161.6
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEEC
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGSIKIS 767 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~~~ 767 (1262)
..+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 4688999998773 246999999999999999999999999999999999976531 258999999
Q ss_pred CccCC-------cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc----ccccc
Q 000838 768 GYPKK-------HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP----LRQSL 836 (1262)
Q Consensus 768 g~~~~-------~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~ 836 (1262)
|.+.. ...+++.++|++|++.+++. |+.||+.+....... ......++.++++++.+++.+ ..+..
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 158 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGV--KRRSILEERVENALRNAALWDEVKDRLGDL 158 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCC--ChHHHHHHHHHHHHHHcCCchhhhHHHhCC
Confidence 87642 12345679999999988885 999999876433211 111222345777888887742 22332
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 837 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 837 ~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
...||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+..|+++
T Consensus 159 -----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~ 231 (265)
T PRK14252 159 -----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTA 231 (265)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999974 4666778753
No 455
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.6e-31 Score=296.67 Aligned_cols=195 Identities=22% Similarity=0.349 Sum_probs=153.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSS--LKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|..+|. ...+|+|.++|.++... ..++.++|++|++.+++ .|++||+.|+..
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~ 110 (251)
T PRK14270 32 ITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPR 110 (251)
T ss_pred EEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHH
Confidence 47999999999999999999998751 01389999999987532 12457999999988877 899999998654
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCccc-ccccccCCcccccccccchh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNC-ADILVGDEMIRGISGGQKKR 152 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~-~~t~vg~~~~~~LSGGqkqR 152 (1262)
..+... ..+.+++++++++.+||.+. .+ .. +..+..||||||||
T Consensus 111 ~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~-~~-~~~~~~LS~G~~qr 155 (251)
T PRK14270 111 IHGIKD---------------------------------KKELDKIVEWALKKAALWDEVKD-DL-KKSALKLSGGQQQR 155 (251)
T ss_pred hcCCCc---------------------------------HHHHHHHHHHHHHHcCCchhhhh-Hh-hCCcccCCHHHHHH
Confidence 321100 00112345667888887431 11 11 24567899999999
Q ss_pred hHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcch
Q 000838 153 VTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPREL 232 (1262)
Q Consensus 153 vsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~ 232 (1262)
++||||++.+|+|++|||||+|||+.++.++.+.|++..+ + ++|++++|+.+++.+.|||+++|++|++++.|++++
T Consensus 156 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 232 (251)
T PRK14270 156 LCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEK 232 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHH
Confidence 9999999999999999999999999999999999998643 3 567778899999999999999999999999999887
Q ss_pred HH
Q 000838 233 VL 234 (1262)
Q Consensus 233 ~~ 234 (1262)
+.
T Consensus 233 ~~ 234 (251)
T PRK14270 233 IF 234 (251)
T ss_pred Hh
Confidence 63
No 456
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=99.97 E-value=3.3e-31 Score=294.45 Aligned_cols=184 Identities=26% Similarity=0.352 Sum_probs=154.1
Q ss_pred EeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEecCCCCCCCCCCHH
Q 000838 720 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH---ETFARISGYCEQNDIHSPFVTVH 796 (1262)
Q Consensus 720 il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lTv~ 796 (1262)
+|+|+||++++||+++|+||||||||||+++|+|..+ . +|+|.++|.+... ..+++.++|++|++.+++.+|+.
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~--~-~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP--G-SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--C-CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999764 2 7999999987532 23345689999998888889999
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCCccee
Q 000838 797 ESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVA-------NPSIIFMD 869 (1262)
Q Consensus 797 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~-------~p~illlD 869 (1262)
||+.+.... ....+..++.++++++.+++.+..++.+ ..||||||||++||+||+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 1122333456789999999987766653 4799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 870 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 870 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||+|||+.++..+.+.|++++++|+|||++||++. ++.+..|+++
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~ 204 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVW 204 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEE
Confidence 999999999999999999999877999999999975 4666777753
No 457
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=9.8e-32 Score=296.14 Aligned_cols=197 Identities=24% Similarity=0.348 Sum_probs=152.0
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.+.. .+.+++|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYDE------------KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecCC------------CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeH
Confidence 4678888877631 2358999999999999999999999999999999999876 4589999999765
Q ss_pred Cc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccc------cCCCC
Q 000838 772 KH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLV------GLPGV 842 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~------~~~~~ 842 (1262)
.. ..+++.++|++|++.+++. |+.||+.+... .... ..+++.++.+++.+..+... ....+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NATD----EEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 2345679999999887775 99999976421 1111 12344445444443322211 01124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
..||||||||++||++|+.+|++++|||||+|||+.++..+++.|+++. +|+|||++||++.. + +..|+.
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~i 207 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLST-I-KNADKI 207 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHH-H-hhCCEE
Confidence 6899999999999999999999999999999999999999999999985 58999999999853 3 457764
No 458
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.6e-31 Score=300.10 Aligned_cols=190 Identities=21% Similarity=0.289 Sum_probs=156.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccC-CCCCCCHHHHHHHHHhccC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDN-HIGEMTVRETLAFSARCQG 76 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++..||.||+.++....+
T Consensus 35 ~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~ 111 (277)
T PRK13642 35 WVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQG 111 (277)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHcC
Confidence 47999999999999999999999998 999999999875422 2467999999964 5778899999988653221
Q ss_pred CCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHH
Q 000838 77 VGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTG 156 (1262)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA 156 (1262)
.. .++..++++.+++.+||.+..++ .+..||||||||++||
T Consensus 112 ~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 112 IP----------------------------------REEMIKRVDEALLAVNMLDFKTR-----EPARLSGGQKQRVAVA 152 (277)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHCCCHhHhhC-----CcccCCHHHHHHHHHH
Confidence 10 00112346778899999876664 4567999999999999
Q ss_pred HHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 157 EMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 157 ~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||+.+|+++||||||+|||+.++..+.+.|+++.+ ..+++|++++|+.+++. .||++++|++|++++.|+++++.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~ 228 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKE-KYQLTVLSITHDLDEAA-SSDRILVMKAGEIIKEAAPSELF 228 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999998754 32456677899998886 69999999999999999987764
No 459
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=99.97 E-value=2.9e-31 Score=297.31 Aligned_cols=192 Identities=22% Similarity=0.336 Sum_probs=154.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCcc-----CCCCc-------ccceEEeeccccC--CCCCCCHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHN-----MGEFV-------PQRTAAYISQHDN--HIGEMTVRE 66 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~-----~~~~~-------~~~~~~yv~Q~~~--~~~~lTv~e 66 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.+ +.... .++.++|++|++. +.+.+|+.|
T Consensus 34 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~ 110 (258)
T PRK11701 34 VLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGG 110 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHH
Confidence 47999999999999999999999998 9999999987 54322 1346999999963 567789999
Q ss_pred HHHHHHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcc-cccccccCCccccc
Q 000838 67 TLAFSARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDN-CADILVGDEMIRGI 145 (1262)
Q Consensus 67 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~-~~~t~vg~~~~~~L 145 (1262)
|+.+.....+. .. ..+.++.++++++.+++.+ ..+ +.+..|
T Consensus 111 ~i~~~~~~~~~-~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~~L 152 (258)
T PRK11701 111 NIGERLMAVGA-RH--------------------------------YGDIRATAGDWLERVEIDAARID-----DLPTTF 152 (258)
T ss_pred HHHHHHHHhcc-Cc--------------------------------HHHHHHHHHHHHHHcCCChhHHh-----CCCccC
Confidence 99764321100 00 0011234677899999964 444 445679
Q ss_pred ccccchhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEE
Q 000838 146 SGGQKKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIV 225 (1262)
Q Consensus 146 SGGqkqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~ 225 (1262)
|||||||++|||||+.+|+|++|||||+|||+.++..+.+.|+++.+ ..+.+|++++|+.+++.+.||++++|++|+++
T Consensus 153 S~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~ 231 (258)
T PRK11701 153 SGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVR-ELGLAVVIVTHDLAVARLLAHRLLVMKQGRVV 231 (258)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998654 33567778999999999999999999999999
Q ss_pred EecCcchHH
Q 000838 226 YQGPRELVL 234 (1262)
Q Consensus 226 ~~G~~~~~~ 234 (1262)
+.|+++++.
T Consensus 232 ~~~~~~~~~ 240 (258)
T PRK11701 232 ESGLTDQVL 240 (258)
T ss_pred EeCCHHHHh
Confidence 999987753
No 460
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=99.97 E-value=2.2e-31 Score=279.17 Aligned_cols=161 Identities=28% Similarity=0.435 Sum_probs=137.6
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++. ..+.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 68 (173)
T cd03246 2 EVENVSFRYPG-----------AEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLR--PTSGRVRLDGADISQ 68 (173)
T ss_pred EEEEEEEEcCC-----------CCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCeEEECCEEccc
Confidence 46777776531 12358999999999999999999999999999999999876 458999999987532
Q ss_pred ---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000838 774 ---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQR 850 (1262)
Q Consensus 774 ---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 850 (1262)
..+++.++|++|++.+++ .|++||+ ||||||
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~~l---------------------------------------------LS~G~~ 102 (173)
T cd03246 69 WDPNELGDHVGYLPQDDELFS-GSIAENI---------------------------------------------LSGGQR 102 (173)
T ss_pred CCHHHHHhheEEECCCCcccc-CcHHHHC---------------------------------------------cCHHHH
Confidence 234567999999988776 4888876 899999
Q ss_pred HHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 851 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 851 qrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. .+ +..|+.
T Consensus 103 qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~-~~~d~v 165 (173)
T cd03246 103 QRLGLARALYGNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPE-TL-ASADRI 165 (173)
T ss_pred HHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhCCEE
Confidence 9999999999999999999999999999999999999999877999999999975 33 566664
No 461
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.3e-31 Score=298.35 Aligned_cols=196 Identities=19% Similarity=0.316 Sum_probs=153.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCC--CCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDS--SLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~--~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|.++| ....+|+|.++|.++... ..++.++|++|++.+++. ||+||+.++..
T Consensus 40 ~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~ 118 (259)
T PRK14274 40 VTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPR 118 (259)
T ss_pred EEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHH
Confidence 4799999999999999999999863 111389999999987421 224579999999888875 99999988653
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
..+... .++..++++++++.+|+.+...... +..+.+||||||||+
T Consensus 119 ~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~l-~~~~~~LS~Gq~qrv 164 (259)
T PRK14274 119 IHGTKN---------------------------------KKKLQEIVEKSLKDVALWDEVKDRL-HTQALSLSGGQQQRL 164 (259)
T ss_pred hcCCCC---------------------------------HHHHHHHHHHHHHHcCCchhhhhhh-hCCcccCCHHHHHHH
Confidence 321000 0011233566788888854211111 245668999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||+|+.+|++++|||||+|||+.++..+.+.|+++. ++ .++++++|+.+++.+.||++++|++|+++..|+++++
T Consensus 165 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 165 CIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK--EK-YTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999863 23 5677789999999999999999999999999998876
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 242 ~ 242 (259)
T PRK14274 242 F 242 (259)
T ss_pred h
Confidence 4
No 462
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.3e-31 Score=298.31 Aligned_cols=196 Identities=17% Similarity=0.250 Sum_probs=152.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC--CCCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD--SSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|++.+++ .||+||+.++..
T Consensus 41 ~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~ 119 (260)
T PRK10744 41 VTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVR 119 (260)
T ss_pred EEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHh
Confidence 479999999999999999999986 2101289999999887421 12457999999987777 899999988653
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.... .. .++.+++++++++.+++.+...... ++.+..||||||||+
T Consensus 120 ~~~~-~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qrv 165 (260)
T PRK10744 120 LFEK-LS--------------------------------RAEMDERVEWALTKAALWNEVKDKL-HQSGYSLSGGQQQRL 165 (260)
T ss_pred hcCC-CC--------------------------------HHHHHHHHHHHHHHcCCChhhHHHH-hcCCCCCCHHHHHHH
Confidence 2110 00 0011234667888888743211111 245568999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|++++|+.+++.+.+|++++|++|+++..|+.+++
T Consensus 166 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (260)
T PRK10744 166 CIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK--QD-YTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTI 242 (260)
T ss_pred HHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999863 23 5677789999999999999999999999999998776
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 243 ~ 243 (260)
T PRK10744 243 F 243 (260)
T ss_pred H
Confidence 3
No 463
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4.2e-31 Score=306.05 Aligned_cols=204 Identities=27% Similarity=0.374 Sum_probs=175.9
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
.-+.++|++.++. ..++|+||||++++||++||+|.||||||||+|+|+|..+ +.+|+|.+||++
T Consensus 7 ~ll~~~~i~K~Fg-------------gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~ 71 (500)
T COG1129 7 PLLELRGISKSFG-------------GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKP 71 (500)
T ss_pred ceeeeecceEEcC-------------CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEE
Confidence 3566888887763 4579999999999999999999999999999999999876 468999999987
Q ss_pred CCc----ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000838 771 KKH----ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRL-APEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGL 845 (1262)
Q Consensus 771 ~~~----~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 845 (1262)
... +....-++.|.|+..+.|++||.||+.++...+. ..-.+.+..++++.++|+.+++....++.++ +|
T Consensus 72 ~~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~L 146 (500)
T COG1129 72 VAFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DL 146 (500)
T ss_pred ccCCCHHHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hC
Confidence 642 2234568999999999999999999987755443 2335667777889999999999644666654 69
Q ss_pred CHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 846 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 846 SgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
|.||||.|.|||||..+++||+|||||+.|+......+.+.+++++++|.+||++||... |+++..|++
T Consensus 147 siaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~Dri 215 (500)
T COG1129 147 SIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRI 215 (500)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEE
Confidence 999999999999999999999999999999999999999999999999999999999875 899999984
No 464
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.8e-31 Score=296.59 Aligned_cols=197 Identities=20% Similarity=0.298 Sum_probs=154.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC--CCCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD--SSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|+++ |....+|+|.++|.++... ..++.++|++|++.+++.+|++||+.++..
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~ 111 (252)
T PRK14256 32 VTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYK 111 (252)
T ss_pred EEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHH
Confidence 479999999999999999999985 3111289999999887431 224679999999989998999999987653
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
..+. .+ ..+.+++++++++.+|+.+...... +..+..||||||||+
T Consensus 112 ~~~~---~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrl 157 (252)
T PRK14256 112 LNGR---VN------------------------------RSEADEIVESSLKRVALWDEVKDRL-KSNAMELSGGQQQRL 157 (252)
T ss_pred hcCC---CC------------------------------HHHHHHHHHHHHHHcCCchhhhHHh-hCCcCcCCHHHHHHH
Confidence 2210 00 0011234567788888854211111 135668999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 158 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14256 158 CIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKI 234 (252)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998742 3 5677789999999999999999999999999998775
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 235 ~ 235 (252)
T PRK14256 235 F 235 (252)
T ss_pred H
Confidence 3
No 465
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.1e-31 Score=296.81 Aligned_cols=196 Identities=27% Similarity=0.344 Sum_probs=151.3
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++. .++.+++|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhh
Confidence 46777776631 11358999999999999999999999999999999999876 458999999976532
Q ss_pred ---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHH-----HHHHHHHHc--CCcccccccccCCCCC
Q 000838 774 ---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKM-----FIEEIMELV--ELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 774 ---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~l--~l~~~~~~~~~~~~~~ 843 (1262)
...++.++|++|++.+++ .|++||+.+... ........+ .+++.++.+ ++.+..+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRP-----GATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 234567999999988876 699999977431 111111111 133444444 444444433 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++. +|+|||++||++. ++ +..|+++
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~ 207 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIV 207 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEE
Confidence 799999999999999999999999999999999999999999999986 4899999999985 34 4477753
No 466
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=99.97 E-value=1.5e-31 Score=340.75 Aligned_cols=196 Identities=30% Similarity=0.357 Sum_probs=164.4
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|++++++. .++.+|+|+|++++|||.+||+||||||||||+|+|+|..+ +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 46899999999852 12469999999999999999999999999999999999877 458999999988
Q ss_pred CC---cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000838 771 KK---HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 840 (1262)
Q Consensus 771 ~~---~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 840 (1262)
++ ...+++.+|||+|++.+++ -|++||+.++. + .+. ++++++++..++.+. .|+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~-----~-~~~----e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA-----P-LTL----DEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC-----C-CCH----HHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 64 3467889999999999886 59999998742 1 222 236778888887654 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
..+||||||||++|||||+++|+||+||||||+||+.+++.+.+.|+++ ++|+|++||+++ ..+.+|+++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Ii 655 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIY 655 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEE
Confidence 4679999999999999999999999999999999999999999999876 589999999974 667889864
No 467
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=99.97 E-value=4.2e-31 Score=295.16 Aligned_cols=189 Identities=23% Similarity=0.269 Sum_probs=153.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCC----CCceeEEEEECCccCCCCcc-cceEEeeccccC--CCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDS----SLKVSGRVTYNGHNMGEFVP-QRTAAYISQHDN--HIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~----~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~--~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|..+| + +|+|.++|.++..... ++.++||+|++. +.+..|+.+++.+.+.
T Consensus 31 ~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~---~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~ 107 (254)
T PRK10418 31 VLALVGGSGSGKSLTCAAALGILPAGVRQT---AGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCL 107 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCCCc---CCEEEECCeeccccccccceEEEEecCCccccCccccHHHHHHHHHH
Confidence 4799999999999999999999988 6 8999999998753322 357999999974 4466799999876442
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcc---cccccccCCcccccccccc
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDN---CADILVGDEMIRGISGGQK 150 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~---~~~t~vg~~~~~~LSGGqk 150 (1262)
..+.. ...+++.++++.+||.+ ..+ +.+..||||||
T Consensus 108 ~~~~~------------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~~~~LS~Gq~ 146 (254)
T PRK10418 108 ALGKP------------------------------------ADDATLTAALEAVGLENAARVLK-----LYPFEMSGGML 146 (254)
T ss_pred HcCCC------------------------------------hHHHHHHHHHHHcCCCChhhhhh-----cCCcccCHHHH
Confidence 21100 00134567889999976 233 45568999999
Q ss_pred hhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 151 KRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 151 qRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
|||+|||||+.+|++|||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+.+|++++|++|++++.|+.
T Consensus 147 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~ 225 (254)
T PRK10418 147 QRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDV 225 (254)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCH
Confidence 9999999999999999999999999999999999999987543 345677789999999999999999999999999998
Q ss_pred chHH
Q 000838 231 ELVL 234 (1262)
Q Consensus 231 ~~~~ 234 (1262)
+++.
T Consensus 226 ~~~~ 229 (254)
T PRK10418 226 ETLF 229 (254)
T ss_pred HHHh
Confidence 7763
No 468
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=99.97 E-value=2.4e-31 Score=290.88 Aligned_cols=191 Identities=24% Similarity=0.348 Sum_probs=152.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcccceEEeeccccCCC--CCCCHHHHHHHHHhccCCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVPQRTAAYISQHDNHI--GEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~--~~lTv~e~l~f~~~~~~~~ 78 (1262)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++.. .++.++|++|++.++ ..+|++||+.++.... .+
T Consensus 8 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~-~~ 81 (223)
T TIGR03771 8 LLGLLGPNGAGKTTLLRAILGLIPPA---KGTVKVAGASPGK--GWRHIGYVPQRHEFAWDFPISVAHTVMSGRTGH-IG 81 (223)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccchH--hhCcEEEecccccccCCCCccHHHHHHhccccc-cc
Confidence 47999999999999999999999988 9999999987643 245799999997653 3479999998753210 00
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
.... ...+.++.++++++.+|+++..++ .+.+||||||||++||||
T Consensus 82 -~~~~----------------------------~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~lara 127 (223)
T TIGR03771 82 -WLRR----------------------------PCVADFAAVRDALRRVGLTELADR-----PVGELSGGQRQRVLVARA 127 (223)
T ss_pred -cccC----------------------------CcHHHHHHHHHHHHHhCCchhhcC-----ChhhCCHHHHHHHHHHHH
Confidence 0000 000112346778999999876664 445799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++++++++|+.+++.+.||+++++ +|++++.|+.+++.
T Consensus 128 l~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~ 200 (223)
T TIGR03771 128 LATRPSVLLLDEPFTGLDMPTQELLTELFIELAG-A-GTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQ 200 (223)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhc
Confidence 9999999999999999999999999999998643 3 456677899999999999999999 89999999887653
No 469
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=99.97 E-value=1.1e-31 Score=297.32 Aligned_cols=197 Identities=28% Similarity=0.405 Sum_probs=148.4
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.+... +++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~~----------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPSR----------PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCCC----------CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhh
Confidence 467777665310 12458999999999999999999999999999999999876 458999999977532
Q ss_pred ---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCCCC
Q 000838 774 ---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQS-------LVGLPGVN 843 (1262)
Q Consensus 774 ---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-------~~~~~~~~ 843 (1262)
...++.++|++|++.+++ .|++||+.+.... ...+. .++.++..++.+..+. ... ..+.
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 138 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPD-----ATDEE----VEEAAKKANIHDFIMSLPDGYDTLVG-ERGS 138 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCC-----CCHHH----HHHHHHHcChHHHHHhhccccceeec-cCCc
Confidence 233467999999988776 6999999874211 11111 2222333333221111 111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||++||++.. + +.+|+++
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~-~-~~~d~v~ 208 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLST-I-RNADLIA 208 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-hhCCEEE
Confidence 799999999999999999999999999999999999999999999987 78999999999763 3 4677753
No 470
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=1.8e-31 Score=254.87 Aligned_cols=180 Identities=26% Similarity=0.357 Sum_probs=154.5
Q ss_pred CceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC------c---ccccceEEEecCC
Q 000838 716 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKK------H---ETFARISGYCEQN 786 (1262)
Q Consensus 716 ~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~------~---~~~~~~~~~v~q~ 786 (1262)
+...+|.||+++.+.||.+.++||||||||||++.|.-... +.+|+..|.|...+ . ...|+.+|.|+|+
T Consensus 13 g~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~--p~sg~l~ia~~~fd~s~~~~~k~i~~lr~~vgmvfqq 90 (242)
T COG4161 13 GAHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFDFSKTPSDKAIRDLRRNVGMVFQQ 90 (242)
T ss_pred ccchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhC--CCCCeEEecccccccccCccHHHHHHHHHhhhhhhhh
Confidence 34568999999999999999999999999999999975444 45798888775321 1 2467889999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000838 787 DIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSII 866 (1262)
Q Consensus 787 ~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~il 866 (1262)
-.++|.+||.|||.-+. ++. .+.++++.+.+..++++.+.|.+.+|.. +-.|||||+|||+|||||+.+|++|
T Consensus 91 y~lwphltv~enlieap-~kv-~gl~~~qa~~~a~ellkrlrl~~~adr~-----plhlsggqqqrvaiaralmmkpqvl 163 (242)
T COG4161 91 YNLWPHLTVQENLIEAP-CRV-LGLSKDQALARAEKLLKRLRLKPYADRY-----PLHLSGGQQQRVAIARALMMEPQVL 163 (242)
T ss_pred hccCchhHHHHHHHhhh-HHH-hCCCHHHHHHHHHHHHHHhccccccccC-----ceecccchhhhHHHHHHHhcCCcEE
Confidence 99999999999987543 221 2355667777889999999999999986 3479999999999999999999999
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCC
Q 000838 867 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 904 (1262)
Q Consensus 867 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~ 904 (1262)
++||||+.|||+-..++.++|++++..|.|-+++||..
T Consensus 164 lfdeptaaldpeitaqvv~iikel~~tgitqvivthev 201 (242)
T COG4161 164 LFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEV 201 (242)
T ss_pred eecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeeh
Confidence 99999999999999999999999999999999999964
No 471
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=99.97 E-value=3.2e-31 Score=294.51 Aligned_cols=187 Identities=25% Similarity=0.367 Sum_probs=153.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc---cceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
+++|+||||||||||+++|+|..+ . +|+|.++|.++..... ++.++|++|++.+++.+|++||+.+......
T Consensus 24 i~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~- 98 (248)
T PRK03695 24 ILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVFQYLTLHQPDKT- 98 (248)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHHHHHHhcCccCC-
Confidence 479999999999999999999985 3 7999999998754322 3468999999888888999999987532100
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
. ..+..++++++++.+||.+..+. .++.||||||||++|||
T Consensus 99 --~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~la~ 139 (248)
T PRK03695 99 --R--------------------------------TEAVASALNEVAEALGLDDKLGR-----SVNQLSGGEWQRVRLAA 139 (248)
T ss_pred --C--------------------------------cHHHHHHHHHHHHHcCCHhHhcC-----CcccCCHHHHHHHHHHH
Confidence 0 00112346778999999876663 45679999999999999
Q ss_pred HHhc-------CCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 158 MMVG-------PALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 158 al~~-------~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
||+. +|++++|||||+|||+.++..+.+.|+++.+ + +++|++++|+.+++.++||++++|++|++++.|+.
T Consensus 140 al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 217 (248)
T PRK03695 140 VVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ-Q-GIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRR 217 (248)
T ss_pred HHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9997 6799999999999999999999999998753 3 45677789999999999999999999999999987
Q ss_pred chH
Q 000838 231 ELV 233 (1262)
Q Consensus 231 ~~~ 233 (1262)
+++
T Consensus 218 ~~~ 220 (248)
T PRK03695 218 DEV 220 (248)
T ss_pred HHH
Confidence 765
No 472
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=99.97 E-value=1.7e-31 Score=333.07 Aligned_cols=193 Identities=25% Similarity=0.400 Sum_probs=154.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
.+||+||||||||||+++|+|+++|+ +|+|.+||.++.+.. .++.++||+|++.+|. .||+|||.++..-.
T Consensus 357 ~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~~a-- 430 (567)
T COG1132 357 KVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRPDA-- 430 (567)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCCCC--
Confidence 37999999999999999999999998 999999999987654 3578999999987776 89999999975310
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHH
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGE 157 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~ 157 (1262)
..+...++++.. ...+.++ .+++.+||.|| +.+..||||||||++|||
T Consensus 431 --t~eei~~a~k~a---------------------------~~~d~I~--~lp~g~dt~vg-e~G~~LSgGQrQrlaiAR 478 (567)
T COG1132 431 --TDEEIEEALKLA---------------------------NAHEFIA--NLPDGYDTIVG-ERGVNLSGGQRQRLAIAR 478 (567)
T ss_pred --CHHHHHHHHHHh---------------------------ChHHHHH--hCcccccceec-CCCccCCHHHHHHHHHHH
Confidence 001111111100 1122233 45788999999 456679999999999999
Q ss_pred HHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 158 MMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 158 al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|++.+|+|++||||||+||+.+...+.+.++++. +++|+++ ++|..+.+.+ ||+|+||++|++++.|+++++.+
T Consensus 479 all~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti~~-aD~IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 479 ALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTIKN-ADRIIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred HHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHHHh-CCEEEEEECCEEEEecCHHHHHH
Confidence 9999999999999999999999999999998654 3456666 7777665555 99999999999999999999875
No 473
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=99.97 E-value=3.5e-31 Score=296.03 Aligned_cols=196 Identities=20% Similarity=0.290 Sum_probs=159.1
Q ss_pred EEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 000838 692 SLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPK 771 (1262)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 771 (1262)
.+.++|+++.++. +...+|+|+|++|++||+++|+||||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4678999988742 12358999999999999999999999999999999999875 369999999876
Q ss_pred Cc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000838 772 KH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGL------PGV 842 (1262)
Q Consensus 772 ~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~------~~~ 842 (1262)
.. ..+++.++|++|++.+++ .|++||+.... .... +.+.++++.+||.+..+..++. +..
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~~----~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWSD----EEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCCH----HHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 32 345678999999999887 59999996321 1121 2367788889998766554321 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 843 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 843 ~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
..||||||||++|||||+.+|+||+|||||++||+.+...+.+.|+++. +++|||+++|++. .+ ...|++
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri 206 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRF 206 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEE
Confidence 5699999999999999999999999999999999999999999999875 4899999999984 34 457875
No 474
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=99.97 E-value=1.7e-31 Score=340.34 Aligned_cols=189 Identities=23% Similarity=0.334 Sum_probs=149.4
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 2 TLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 2 ~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
++|+||||||||||+++|+|+++|+ +|+|.+||.++.+.. .++.++||+|++.+|+ .|++|||.++.. .
T Consensus 482 vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~~-~--- 553 (686)
T TIGR03797 482 VAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGAP-L--- 553 (686)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCCC-C---
Confidence 7999999999999999999999998 999999999987654 3578999999997764 699999998532 0
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
..+ +.....+..+ .++.+ -.+++..||.+|+. ..+||||||||++||||
T Consensus 554 -~~e---~i~~al~~a~------------------------l~~~i--~~lp~G~dt~ige~-G~~LSGGQrQRialARA 602 (686)
T TIGR03797 554 -TLD---EAWEAARMAG------------------------LAEDI--RAMPMGMHTVISEG-GGTLSGGQRQRLLIARA 602 (686)
T ss_pred -CHH---HHHHHHHHcC------------------------cHHHH--HhccccccccccCC-CCCCCHHHHHHHHHHHH
Confidence 001 0110000000 11111 13567889999864 56899999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|+++|+|++||||||+||+.++.++.+.|++. ++ |+++++|+.+ ..+.||+|++|++|+++++|+++++.+
T Consensus 603 ll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~-T~IiItHr~~-~i~~~D~Iivl~~G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 603 LVRKPRILLFDEATSALDNRTQAIVSESLERL----KV-TRIVIAHRLS-TIRNADRIYVLDAGRVVQQGTYDELMA 673 (686)
T ss_pred HhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CC-eEEEEecChH-HHHcCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999863 34 4555777654 456799999999999999999998754
No 475
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=99.97 E-value=8e-31 Score=323.37 Aligned_cols=201 Identities=24% Similarity=0.256 Sum_probs=162.0
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECC-----
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISG----- 768 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g----- 768 (1262)
.++|+++++. ++.+|+|+||++++||+++|+|||||||||||++|+|.....+.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~ 68 (520)
T TIGR03269 2 EVKNLTKKFD-------------GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEK 68 (520)
T ss_pred EEEEEEEEEC-------------CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccc
Confidence 4678887762 3469999999999999999999999999999999999752114589999972
Q ss_pred ------------------ccC----------Cc---ccccceEEEecCC-CCCCCCCCHHHHHHHHHHhhcCCCCCHHHH
Q 000838 769 ------------------YPK----------KH---ETFARISGYCEQN-DIHSPFVTVHESLAFSAWLRLAPEVDSETR 816 (1262)
Q Consensus 769 ------------------~~~----------~~---~~~~~~~~~v~q~-~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~ 816 (1262)
.+. .. ...++.++|++|+ +.+++.+|+.|++.+...... .+.++.
T Consensus 69 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~---~~~~~~ 145 (520)
T TIGR03269 69 CGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIG---YEGKEA 145 (520)
T ss_pred ccccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcC---CCHHHH
Confidence 111 00 1234578999997 678888999999988654321 233444
Q ss_pred HHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CC
Q 000838 817 KMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GR 895 (1262)
Q Consensus 817 ~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~ 895 (1262)
++++.++++.+||.+..++.+ .+|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|++++++ |+
T Consensus 146 ~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~ 220 (520)
T TIGR03269 146 VGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGI 220 (520)
T ss_pred HHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCc
Confidence 567889999999987776653 579999999999999999999999999999999999999999999999654 89
Q ss_pred EEEEEecCCCHHHHHHhhhhc
Q 000838 896 TVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 896 tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
|||++|||+. .+.+.+|+++
T Consensus 221 tviivtHd~~-~~~~~~d~i~ 240 (520)
T TIGR03269 221 SMVLTSHWPE-VIEDLSDKAI 240 (520)
T ss_pred EEEEEeCCHH-HHHHhcCEEE
Confidence 9999999975 3556778754
No 476
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.7e-31 Score=295.85 Aligned_cols=196 Identities=21% Similarity=0.338 Sum_probs=152.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC--CCCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD--SSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|..+ |+...+|+|.++|.++... ..++.++|++|++.+++ .||+||+.++..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~ 111 (252)
T PRK14239 33 ITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLR 111 (252)
T ss_pred EEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHH
Confidence 479999999999999999999853 4211389999999887421 22457999999987776 899999998654
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
..+... .+...+.++++++.+++.+...... ++.+..||||||||+
T Consensus 112 ~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv 157 (252)
T PRK14239 112 LKGIKD---------------------------------KQVLDEAVEKSLKGASIWDEVKDRL-HDSALGLSGGQQQRV 157 (252)
T ss_pred HcCCCc---------------------------------HHHHHHHHHHHHHHcCCchhHHHHH-hcCcccCCHHHHHHH
Confidence 321100 0001223556778888743211111 245678999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|++.. .+ ++|++++|+.+++.+.||++++|++|++++.|+.+++
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 158 CIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLK--DD-YTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHh--hC-CeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999864 23 5677789999999999999999999999999998876
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 235 ~ 235 (252)
T PRK14239 235 F 235 (252)
T ss_pred H
Confidence 3
No 477
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.97 E-value=2.3e-31 Score=331.11 Aligned_cols=199 Identities=26% Similarity=0.416 Sum_probs=166.1
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.++. +++.+|+|+|++++|||+++|+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46999999998842 12358999999999999999999999999999999999876 458999999987
Q ss_pred CCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccc------cccccCCC
Q 000838 771 KKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLR------QSLVGLPG 841 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~------~~~~~~~~ 841 (1262)
.+. ..+++.++||+|++.+++ .|++||+.++. ++.+ ++.++++++.+++.+.. |+.+|. .
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~-----~~~~----~~~i~~al~~~~l~~~i~~p~GldT~vge-~ 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA-----PNAS----DEALIEVLQQVGLEKLLEDDKGLNAWLGE-G 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC-----CccC----HHHHHHHHHHcCCHHHHcCccccCchhcC-C
Confidence 643 456788999999998886 59999998752 1222 23477888888887653 455554 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 842 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 842 ~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
...||||||||++||||++++|++|+|||||++||+.++..+.+.|+++. +++|+|+++|+++ ....+|+.+
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~ 544 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRIC 544 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEE
Confidence 56799999999999999999999999999999999999999999999885 4899999999985 456788854
No 478
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.2e-31 Score=295.94 Aligned_cols=197 Identities=20% Similarity=0.332 Sum_probs=153.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC--CCCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD--SSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|..+ |....+|+|.++|.++... ..++.++|++|++.+++. ||+||+.++..
T Consensus 33 ~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~ 111 (251)
T PRK14244 33 VTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPK 111 (251)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHH
Confidence 479999999999999999999985 2101289999999886432 124679999999888875 99999988643
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.++.... ..+.++.++++++.+||.+...+.. +..+.+||||||||+
T Consensus 112 ~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qrv 158 (251)
T PRK14244 112 LHGLAKN--------------------------------KKKLDEIVEKSLTSVGLWEELGDRL-KDSAFELSGGQQQRL 158 (251)
T ss_pred hcCCCCC--------------------------------HHHHHHHHHHHHHHcCCCchhhhHh-hcChhhCCHHHHHHH
Confidence 2211000 0011223567789999865322222 245678999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++. + +.+|++++|+..++.+.||++++|++|++++.|+++++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 159 CIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--K-NFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999863 3 45677789999999999999999999999999988765
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 236 ~ 236 (251)
T PRK14244 236 F 236 (251)
T ss_pred h
Confidence 3
No 479
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=99.97 E-value=3.1e-31 Score=332.66 Aligned_cols=200 Identities=24% Similarity=0.298 Sum_probs=165.6
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..++++|++++++. ..+.+|+|+|+++++||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEE
Confidence 46999999998842 12469999999999999999999999999999999999877 458999999988
Q ss_pred CCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000838 771 KKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNP-------LRQSLVGLP 840 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~ 840 (1262)
.+. ..+++.++|+||++.+++ -|++||+.++. +...++ ++++++++..++.+ -.|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~----~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSR----EQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCH----HHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 643 456788999999999886 69999998641 111232 23667777777554 346666653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
..+||||||||++|||||+++|+||+||||||+||+.++..+.+.|+++. +++|+|++||+++ ..+.+|+++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii 549 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEIL 549 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEE
Confidence 46799999999999999999999999999999999999999999999875 4799999999984 678899864
No 480
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.1e-31 Score=295.02 Aligned_cols=196 Identities=20% Similarity=0.344 Sum_probs=153.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSS--LKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|..+|. ...+|+|.++|.++... ..++.++|++|++.+++ .|++||+.++..
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~ 109 (250)
T PRK14262 31 ITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPR 109 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHH
Confidence 47999999999999999999998741 01289999999887531 22457999999988877 899999998653
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
..+... .++.++.++++++.+|+.+..+.. .++.+.+||||||||+
T Consensus 110 ~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~LS~Gq~qr~ 155 (250)
T PRK14262 110 IHGVKS---------------------------------KHKLDRIVEESLKKAALWDEVKSE-LNKPGTRLSGGQQQRL 155 (250)
T ss_pred HcCCCc---------------------------------HHHHHHHHHHHHHHcCCCchhHHH-HhCChhhcCHHHHHHH
Confidence 221100 001122355677888875421111 2356678999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|++.. ++ +++++++|+.+++.+.+|++++|++|+++..|+++++
T Consensus 156 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 156 CIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELS--EN-YTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHh--cC-cEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999999999999864 23 5677789999999999999999999999999998776
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 233 ~ 233 (250)
T PRK14262 233 V 233 (250)
T ss_pred H
Confidence 4
No 481
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=99.97 E-value=1.4e-29 Score=319.54 Aligned_cols=103 Identities=22% Similarity=0.315 Sum_probs=86.4
Q ss_pred HHHHhCCccc-ccccccCCcccccccccchhhHHHHHHhcCC--eEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEE
Q 000838 123 YLKVLGLDNC-ADILVGDEMIRGISGGQKKRVTTGEMMVGPA--LAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAV 199 (1262)
Q Consensus 123 ~l~~lgL~~~-~~t~vg~~~~~~LSGGqkqRvsiA~al~~~p--~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~i 199 (1262)
.+..+||... .+ +.+.+|||||+|||.||++|..+| ++++|||||+|||+.....+++.|+++.+ . +.+|
T Consensus 470 ~L~~vgL~~l~l~-----r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~-~-G~TV 542 (924)
T TIGR00630 470 FLIDVGLDYLTLS-----RAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRD-L-GNTV 542 (924)
T ss_pred hHhhccccccccC-----CCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHh-C-CCEE
Confidence 3778888653 34 556789999999999999999986 89999999999999999999999998753 3 4456
Q ss_pred EEecCCChhHHHhccceEEe------cCCeEEEecCcchH
Q 000838 200 ISLLQPAPETYNLFDDIILL------SDGQIVYQGPRELV 233 (1262)
Q Consensus 200 i~~~~~~~~~~~~~D~i~vl------~~G~i~~~G~~~~~ 233 (1262)
++++|+.+++. .||+|++| ++|++++.|+++++
T Consensus 543 IvVeHd~~~i~-~aD~vi~LgpgaG~~~G~Iv~~g~~~el 581 (924)
T TIGR00630 543 IVVEHDEETIR-AADYVIDIGPGAGIHGGEVVASGTPEEI 581 (924)
T ss_pred EEEECCHHHHh-hCCEEEEecccccCCCCEEeeccCHHHH
Confidence 66888877764 89999999 89999988876553
No 482
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.8e-31 Score=296.51 Aligned_cols=196 Identities=20% Similarity=0.301 Sum_probs=154.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSS--LKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+++ .||+||+.++..
T Consensus 48 ~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~ 126 (267)
T PRK14237 48 ITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALE 126 (267)
T ss_pred EEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHH
Confidence 47999999999999999999998631 01289999999987431 12457999999987776 699999998653
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
..+.. ..++.+..+.++++.++|.+..+... ++.++.||||||||+
T Consensus 127 ~~~~~---------------------------------~~~~~~~~~~~~l~~~~l~~~i~~~~-~~~~~~LS~G~~qrl 172 (267)
T PRK14237 127 RAGVK---------------------------------DKKVLDEIVETSLKQAALWDQVKDDL-HKSALTLSGGQQQRL 172 (267)
T ss_pred hcCCC---------------------------------CHHHHHHHHHHHHHHcCCCchhhhhh-cCCcccCCHHHHHHH
Confidence 22100 00011234567788888864322222 256678999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++. ++ ++|++++|+.+++.++||++++|++|++++.|+++++
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 173 CIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK--KN-YTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999863 23 5677789999999999999999999999999998876
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 250 ~ 250 (267)
T PRK14237 250 F 250 (267)
T ss_pred h
Confidence 3
No 483
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.97 E-value=3.8e-31 Score=331.97 Aligned_cols=197 Identities=22% Similarity=0.341 Sum_probs=165.7
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|+++.++. ++.+|+|+|+++++||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYP--LTEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEE
Confidence 46899999998841 2358999999999999999999999999999999999877 458999999987
Q ss_pred CC---cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000838 771 KK---HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 840 (1262)
Q Consensus 771 ~~---~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 840 (1262)
++ ...+++.++||+|++.+++. |++||+.++. +.+ +++++++++.+|+.+. .|+.+|.
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e- 472 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGE- 472 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccC-
Confidence 64 34678899999999999885 9999998752 122 2336778888887653 3455554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
...+||||||||++|||||+++|+||+||||||+||+.+++.+.+.|+++.+ ++|+|++||++ +....+|+++
T Consensus 473 ~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~--~~l~~~D~ii 545 (592)
T PRK10790 473 QGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRL--STIVEADTIL 545 (592)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecch--HHHHhCCEEE
Confidence 3457999999999999999999999999999999999999999999998864 69999999998 4677889864
No 484
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.7e-31 Score=296.66 Aligned_cols=196 Identities=24% Similarity=0.347 Sum_probs=154.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCCC----cccceEEeeccccCCCCCCCHHHHHHHHHhc
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSS--LKVSGRVTYNGHNMGEF----VPQRTAAYISQHDNHIGEMTVRETLAFSARC 74 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~--~~~~G~v~~~g~~~~~~----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1262)
+++|+||||||||||+++|+|+++|. ...+|+|.++|.++... ..++.++|++|++.+++ .|++||+.++...
T Consensus 49 ~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~ 127 (276)
T PRK14271 49 VTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRA 127 (276)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHh
Confidence 47999999999999999999998751 01289999999887532 22467999999988887 8999999886432
Q ss_pred cCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhH
Q 000838 75 QGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVT 154 (1262)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvs 154 (1262)
... .. ..+.+..+.++++.+||.+..++.. ++.+..||||||||++
T Consensus 128 ~~~-~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~l-~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 128 HKL-VP--------------------------------RKEFRGVAQARLTEVGLWDAVKDRL-SDSPFRLSGGQQQLLC 173 (276)
T ss_pred ccC-CC--------------------------------HHHHHHHHHHHHHHcCCCchhhhHh-hCCcccCCHHHHHHHH
Confidence 110 00 0011223456788888875332222 2456789999999999
Q ss_pred HHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHH
Q 000838 155 TGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 234 (1262)
Q Consensus 155 iA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~ 234 (1262)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999998642 3 57777899999999999999999999999999988764
No 485
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.6e-31 Score=330.91 Aligned_cols=192 Identities=25% Similarity=0.301 Sum_probs=160.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc------ccceEEeecccc--CCCCCCCHHHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV------PQRTAAYISQHD--NHIGEMTVRETLAFSA 72 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1262)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ .+++.+||.||+.+..
T Consensus 352 ~~~lvG~nGsGKSTLlk~i~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~ 428 (623)
T PRK10261 352 TLSLVGESGSGKSTTGRALLRLVESQ---GGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPL 428 (623)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---CcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999988 999999999875432 245799999986 5888999999998865
Q ss_pred hccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc-ccccccccCCcccccccccch
Q 000838 73 RCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD-NCADILVGDEMIRGISGGQKK 151 (1262)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkq 151 (1262)
..++... ..+.+++++++++.+||+ +..+ ++++.|||||||
T Consensus 429 ~~~~~~~---------------------------------~~~~~~~~~~~L~~~gL~~~~~~-----~~~~~LSgGqrQ 470 (623)
T PRK10261 429 RVHGLLP---------------------------------GKAAAARVAWLLERVGLLPEHAW-----RYPHEFSGGQRQ 470 (623)
T ss_pred HHcCCCC---------------------------------HHHHHHHHHHHHHHcCCCHHHhh-----CCcccCCHHHHH
Confidence 4321100 001234567889999996 4555 456789999999
Q ss_pred hhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcc
Q 000838 152 RVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRE 231 (1262)
Q Consensus 152 RvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~ 231 (1262)
||+|||||+.+|++|||||||+|||+.++.++++.|+++.+. .+.+|+++||+.+++..+||+|++|++|++++.|+++
T Consensus 471 Rv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~-~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~ 549 (623)
T PRK10261 471 RICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRD-FGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRR 549 (623)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHH
Confidence 999999999999999999999999999999999999987643 3456777999999999999999999999999999988
Q ss_pred hHH
Q 000838 232 LVL 234 (1262)
Q Consensus 232 ~~~ 234 (1262)
++.
T Consensus 550 ~i~ 552 (623)
T PRK10261 550 AVF 552 (623)
T ss_pred HHh
Confidence 864
No 486
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.8e-31 Score=297.43 Aligned_cols=191 Identities=21% Similarity=0.316 Sum_probs=150.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC-----CCCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD-----SSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAF 70 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~-----~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f 70 (1262)
+++|+|||||||||||++|+|.++ |+ +|+|.++|.++... ..++.++|++|++.+++ .||+||+.+
T Consensus 41 ~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~---~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~ 116 (269)
T PRK14259 41 VTALIGPSGCGKSTVLRSLNRMNDLIEGCSL---KGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAF 116 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhccccccCCCCC---ceEEEECCEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhh
Confidence 479999999999999999999987 35 89999999886421 22457999999988887 599999998
Q ss_pred HHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccc
Q 000838 71 SARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQK 150 (1262)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqk 150 (1262)
++..++.. + +.+++++++++.+++....+.. -++.+..||||||
T Consensus 117 ~~~~~~~~---~--------------------------------~~~~~~~~~l~~~~l~~~l~~~-~~~~~~~LS~G~~ 160 (269)
T PRK14259 117 GARINGYT---G--------------------------------DMDELVERSLRKAAVWDECKDK-LNESGYSLSGGQQ 160 (269)
T ss_pred hhhhcCCc---H--------------------------------HHHHHHHHHHHHhCCcchhhhh-hCCCcccCCHHHH
Confidence 65432110 0 0112345567777764211111 1245678999999
Q ss_pred hhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecC---------
Q 000838 151 KRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSD--------- 221 (1262)
Q Consensus 151 qRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~--------- 221 (1262)
||++|||||+.+|++++|||||+|||+.++..+.+.|+++. ++ .+|++++|+.+++...||++++|++
T Consensus 161 qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g 237 (269)
T PRK14259 161 QRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK--KN-FTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGG 237 (269)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEEEEEecccccccccc
Confidence 99999999999999999999999999999999999999863 23 5677789999999999999999996
Q ss_pred --CeEEEecCcchHH
Q 000838 222 --GQIVYQGPRELVL 234 (1262)
Q Consensus 222 --G~i~~~G~~~~~~ 234 (1262)
|++++.|+++++.
T Consensus 238 ~~g~~~~~~~~~~~~ 252 (269)
T PRK14259 238 KVGYLVEFNETKKIF 252 (269)
T ss_pred ccceEEEeCCHHHHH
Confidence 6789999988774
No 487
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=99.97 E-value=4.4e-31 Score=287.45 Aligned_cols=191 Identities=25% Similarity=0.350 Sum_probs=165.5
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCcc------cceEEeecccc--CCCCCCCHHHHHHHHHh
Q 000838 2 TLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFVP------QRTAAYISQHD--NHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 2 ~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~~------~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~ 73 (1262)
++|+|+||||||||=.+|.+++++ +|+|.++|+++..... ++.+-.|+||| .+-|.+||.+-|.-+..
T Consensus 316 lGlVGESGSGKsTlG~allrL~~s----~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~ 391 (534)
T COG4172 316 LGLVGESGSGKSTLGLALLRLIPS----QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLR 391 (534)
T ss_pred EEEEecCCCCcchHHHHHHhhcCc----CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhh
Confidence 689999999999999999999976 6999999999875432 46789999996 57799999999998887
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcc-cccccccCCcccccccccchh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDN-CADILVGDEMIRGISGGQKKR 152 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqkqR 152 (1262)
.+.+. .+..|+.+++.+.|+..||+. .. +++++..|||||||
T Consensus 392 vh~~~--------------------------------ls~~eR~~rv~~aL~EVGLDp~~r-----~RYPhEFSGGQRQR 434 (534)
T COG4172 392 VHEPK--------------------------------LSAAERDQRVIEALEEVGLDPATR-----NRYPHEFSGGQRQR 434 (534)
T ss_pred hcCCC--------------------------------CCHHHHHHHHHHHHHHcCCChhHh-----hcCCcccCcchhhH
Confidence 65321 122345667888999999975 44 38899999999999
Q ss_pred hHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcch
Q 000838 153 VTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPREL 232 (1262)
Q Consensus 153 vsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~ 232 (1262)
++||||++-+|++++||||||+||-..+.+|+++|+++.++ .+-.-+.|+||...+..+||+++||++|+|+++|+.++
T Consensus 435 IAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k-~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~ 513 (534)
T COG4172 435 IAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQK-HGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEA 513 (534)
T ss_pred HHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHH-hCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHH
Confidence 99999999999999999999999999999999999998664 45666779999999999999999999999999999998
Q ss_pred HH
Q 000838 233 VL 234 (1262)
Q Consensus 233 ~~ 234 (1262)
+.
T Consensus 514 if 515 (534)
T COG4172 514 VF 515 (534)
T ss_pred Hh
Confidence 74
No 488
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=99.97 E-value=2.1e-31 Score=334.26 Aligned_cols=193 Identities=22% Similarity=0.376 Sum_probs=150.4
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCCC
Q 000838 2 TLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVG 78 (1262)
Q Consensus 2 ~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1262)
++|+||||||||||+++|+|+++|+ +|+|.+||.++.+.. .++.++||+|++.+|+ .|++|||.++..-.
T Consensus 372 ~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~~~~--- 444 (582)
T PRK11176 372 VALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYARTEQ--- 444 (582)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-chHHHHHhcCCCCC---
Confidence 7999999999999999999999998 999999999987654 3578999999987775 69999998853100
Q ss_pred cchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhhHHHHH
Q 000838 79 TRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRVTTGEM 158 (1262)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsiA~a 158 (1262)
...+... ++... ...++.++ .|++..||.+|+. ...||||||||++||||
T Consensus 445 ~~~~~i~---------------------~al~~------~~l~~~i~--~lp~Gldt~ig~~-g~~LSGGqrQRi~LARa 494 (582)
T PRK11176 445 YSREQIE---------------------EAARM------AYAMDFIN--KMDNGLDTVIGEN-GVLLSGGQRQRIAIARA 494 (582)
T ss_pred CCHHHHH---------------------HHHHH------hCcHHHHH--hcccccCceeCCC-CCcCCHHHHHHHHHHHH
Confidence 0000000 00000 00111222 2677889999965 56799999999999999
Q ss_pred HhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchHHH
Q 000838 159 MVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 235 (1262)
Q Consensus 159 l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~~~ 235 (1262)
|+++|+|++||||||+||+.++..+.+.|++.. .+ .++++++|+. +..+.||+|++|++|++++.|+++++.+
T Consensus 495 ll~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~-~tvI~VtHr~-~~~~~~D~Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 495 LLRDSPILILDEATSALDTESERAIQAALDELQ--KN-RTSLVIAHRL-STIEKADEILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred HHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CC-CEEEEEecch-HHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999998752 33 4455567765 4567899999999999999999998764
No 489
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.3e-31 Score=294.11 Aligned_cols=196 Identities=22% Similarity=0.361 Sum_probs=151.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCC--CCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDS--SLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~--~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|..++ ....+|+|.++|.++... ..++.++|++|++.+++ .|++||+.++..
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~ 109 (250)
T PRK14240 31 VTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPR 109 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHH
Confidence 4799999999999999999998753 111389999999987531 12457999999988777 899999998654
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
..+... ..+.++.++++++.+++.+...... ++.+..||||||||+
T Consensus 110 ~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~~LS~G~~qrv 155 (250)
T PRK14240 110 THGIKD---------------------------------KKKLDEIVEKSLKGAALWDEVKDRL-KKSALGLSGGQQQRL 155 (250)
T ss_pred hcCCCC---------------------------------HHHHHHHHHHHHHHcCCchhhHHHH-hcCCCCCCHHHHHHH
Confidence 322100 0011233556677777643211111 245668999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++. ++ ++|++++|+.+++.+.||++++|++|+++..|+++++
T Consensus 156 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 156 CIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--KD-YTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999863 23 5677789999999999999999999999999988765
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 233 ~ 233 (250)
T PRK14240 233 F 233 (250)
T ss_pred H
Confidence 3
No 490
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=99.97 E-value=1.9e-31 Score=332.64 Aligned_cols=199 Identities=31% Similarity=0.458 Sum_probs=165.2
Q ss_pred CcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc
Q 000838 690 PHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGY 769 (1262)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 769 (1262)
...++|+|+++.++. ++.+|+|+|++++|||.+||+||||||||||++.|.|..+ +.+|+|.+||.
T Consensus 326 ~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~ 391 (567)
T COG1132 326 IGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGI 391 (567)
T ss_pred CCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCE
Confidence 346999999999852 3569999999999999999999999999999999999877 45899999998
Q ss_pred cCCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCC-------cccccccccC
Q 000838 770 PKKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVEL-------NPLRQSLVGL 839 (1262)
Q Consensus 770 ~~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l-------~~~~~~~~~~ 839 (1262)
+++. ..+++.++||+|++.++. -|++||+.++. ++.++++ ++++++..++ .+..|+.+|.
T Consensus 392 dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vge 461 (567)
T COG1132 392 DIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDEE----IEEALKLANAHEFIANLPDGYDTIVGE 461 (567)
T ss_pred ehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHHH----HHHHHHHhChHHHHHhCcccccceecC
Confidence 8653 567889999999999988 89999999862 2233333 4444444433 3346888883
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 840 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 840 ~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
+...||||||||++||||++++|+||+||||||+||+.+...+++.++++. +++|+++++|+++ .....|+.+
T Consensus 462 -~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~Ii 534 (567)
T COG1132 462 -RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRII 534 (567)
T ss_pred -CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEE
Confidence 456799999999999999999999999999999999999999999999876 5789999999985 445588854
No 491
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.5e-31 Score=293.92 Aligned_cols=194 Identities=20% Similarity=0.262 Sum_probs=154.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCC--ceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSL--KVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~--~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|+++|.. ..+|+|+++|.++... ..++.++|++|++.++ .+|++||+.++..
T Consensus 36 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~ 114 (261)
T PRK14263 36 ITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLR 114 (261)
T ss_pred EEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHh
Confidence 479999999999999999999997610 1389999999987431 2245799999998776 5999999998754
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
..+.. .+.+..++++++.++|.+..+... +..++.||||||||+
T Consensus 115 ~~~~~-----------------------------------~~~~~~~~~~l~~~~l~~~i~~~~-~~~~~~LS~G~~qrv 158 (261)
T PRK14263 115 LNRYK-----------------------------------GDLGDRVKHALQGAALWDEVKDKL-KVSGLSLSGGQQQRL 158 (261)
T ss_pred hcCch-----------------------------------HHHHHHHHHHHHHcCCchhhhhhh-hCCcccCCHHHHHHH
Confidence 32100 001223566788888854332222 245678999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEec--------CCeEE
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLS--------DGQIV 225 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~--------~G~i~ 225 (1262)
+|||||+.+|++++|||||+|||+.++.++.+.|+++. ++ +++++++|+.+++.+.||++++|+ +|+++
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~--~~-~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~ 235 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK--KD-YTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLV 235 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEE
Confidence 99999999999999999999999999999999999863 23 567778999999999999999995 89999
Q ss_pred EecCcchHH
Q 000838 226 YQGPRELVL 234 (1262)
Q Consensus 226 ~~G~~~~~~ 234 (1262)
+.|+.+++.
T Consensus 236 ~~g~~~~~~ 244 (261)
T PRK14263 236 EMGPTAQIF 244 (261)
T ss_pred EeCCHHHHH
Confidence 999988764
No 492
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=99.97 E-value=3.2e-30 Score=287.50 Aligned_cols=204 Identities=20% Similarity=0.249 Sum_probs=160.7
Q ss_pred cEEEEeeeEEEEecch----hhhh--ccc-cCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEE
Q 000838 691 HSLIFDEVTYSVDMPQ----EMKL--QGV-LEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGS 763 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~----~~~~--~~~-~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~ 763 (1262)
+.+.++|++..++... ..+. .+. ....+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~ 80 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGK 80 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceE
Confidence 3567788766655421 1111 011 2245679999999999999999999999999999999999876 45899
Q ss_pred EEECCccCCcccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000838 764 IKISGYPKKHETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVN 843 (1262)
Q Consensus 764 i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 843 (1262)
|.++|. +++++|+..+.+.+|+.||+.+..... ..+.++..+.++++++.+++.+..+.. ++
T Consensus 81 I~~~g~----------~~~~~~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (264)
T PRK13546 81 VDRNGE----------VSVIAISAGLSGQLTGIENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQP-----VK 142 (264)
T ss_pred EEECCE----------EeEEecccCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----cc
Confidence 999984 345677776777899999998754332 123344455577888989998777665 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+..|++
T Consensus 143 ~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i 213 (264)
T PRK13546 143 KYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKI 213 (264)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEE
Confidence 79999999999999999999999999999999999999999999999777999999999964 455667775
No 493
>COG4136 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=4.6e-31 Score=249.39 Aligned_cols=179 Identities=26% Similarity=0.318 Sum_probs=155.3
Q ss_pred ceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEECCccCCc-ccccceEEEecCCCCCCCCCC
Q 000838 717 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGSIKISGYPKKH-ETFARISGYCEQNDIHSPFVT 794 (1262)
Q Consensus 717 ~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~lT 794 (1262)
+..+|.++|++|.+||++-||||||||||||+..+.|...+. ..+|++++|++.++. ..-+|.+|..+||+.++|.++
T Consensus 14 g~cLLa~~n~Tia~GeivtlMGPSGcGKSTLls~~~G~La~~F~~~G~~~l~~~~l~~lPa~qRq~GiLFQD~lLFphls 93 (213)
T COG4136 14 GSCLLANVNFTIAKGEIVTLMGPSGCGKSTLLSWMIGALAGQFSCTGELWLNEQRLDMLPAAQRQIGILFQDALLFPHLS 93 (213)
T ss_pred CceEEEeeeEEecCCcEEEEECCCCccHHHHHHHHHhhcccCcceeeEEEECCeeccccchhhhheeeeecccccccccc
Confidence 457999999999999999999999999999999999965542 578999999988754 245688999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCC
Q 000838 795 VHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 874 (1262)
Q Consensus 795 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsg 874 (1262)
|.+|+.|+. +.....+.+++.+...++..||....++. +..||||||-||++-|+|+..|+.++||||+|.
T Consensus 94 Vg~Nl~fAl----p~~~KG~aRr~~a~aAL~~~gL~g~f~~d-----P~tlSGGQrARvaL~R~Lla~Pk~lLLDEPFS~ 164 (213)
T COG4136 94 VGQNLLFAL----PATLKGNARRNAANAALERSGLDGAFHQD-----PATLSGGQRARVALLRALLAQPKALLLDEPFSR 164 (213)
T ss_pred cccceEEec----CcccccHHHHhhHHHHHHHhccchhhhcC-----hhhcCcchHHHHHHHHHHHhCcceeeeCCchhH
Confidence 999999863 34445567777889999999999887764 457999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHH-hCCCEEEEEecCC
Q 000838 875 LDARAAAIVMRTVRNTV-DTGRTVVCTIHQP 904 (1262)
Q Consensus 875 LD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~ 904 (1262)
||..-+.+..+.+-... ..|..+|.+|||.
T Consensus 165 LD~ALR~qfR~wVFs~~r~agiPtv~VTHD~ 195 (213)
T COG4136 165 LDVALRDQFRQWVFSEVRAAGIPTVQVTHDL 195 (213)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEeccc
Confidence 99999988888775544 4599999999985
No 494
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.7e-31 Score=293.30 Aligned_cols=196 Identities=19% Similarity=0.258 Sum_probs=152.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCC--ceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHHHHh
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSL--KVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSAR 73 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~--~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1262)
+++|+||||||||||+++|+|+++|+. ..+|+|.++|.++... ..++.++|++|++.+++. |++||+.++..
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~ 110 (251)
T PRK14249 32 ITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPR 110 (251)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHH
Confidence 479999999999999999999998741 1259999999887431 224679999999888874 99999998654
Q ss_pred ccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCcccccccccCCcccccccccchhh
Q 000838 74 CQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLDNCADILVGDEMIRGISGGQKKRV 153 (1262)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 153 (1262)
.++... .++.++.+++.++.++|.+..... -++.+..||||||||+
T Consensus 111 ~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~l~~~-~~~~~~~LS~Gq~qrv 156 (251)
T PRK14249 111 MLGTTA---------------------------------QSRLDEVVEKSLRQAALWDEVKDN-LHKSGLALSGGQQQRL 156 (251)
T ss_pred hcCCCh---------------------------------hhHHHHHHHHHHHHhCCchhhhhH-hhCCcccCCHHHHHHH
Confidence 321100 000112345566777764321111 1245678999999999
Q ss_pred HHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCcchH
Q 000838 154 TTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELV 233 (1262)
Q Consensus 154 siA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~~~~ 233 (1262)
+|||||+.+|++++|||||+|||+.++..+.+.|+++ + + +.+|++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~-~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 157 CIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQEL-K-Q-NYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-h-c-CCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999886 2 3 35677789999999999999999999999999998876
Q ss_pred H
Q 000838 234 L 234 (1262)
Q Consensus 234 ~ 234 (1262)
.
T Consensus 234 ~ 234 (251)
T PRK14249 234 F 234 (251)
T ss_pred H
Confidence 3
No 495
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.97 E-value=4.1e-31 Score=331.70 Aligned_cols=185 Identities=21% Similarity=0.278 Sum_probs=150.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCCc---ccceEEeeccccCCCCCCCHHHHHHHHHhccCC
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLDSSLKVSGRVTYNGHNMGEFV---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGV 77 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1262)
.++|+|+||||||||+++|+|+++|+ +|+|.+||.++.+.. .++.++||+|++.+|+ .|++|||.++...
T Consensus 369 ~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~-~Ti~~NI~~~~~~--- 441 (592)
T PRK10790 369 FVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLA-DTFLANVTLGRDI--- 441 (592)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCcccc-chHHHHHHhCCCC---
Confidence 37999999999999999999999998 999999999987553 3578999999998876 4999999985310
Q ss_pred CcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhC-------CcccccccccCCcccccccccc
Q 000838 78 GTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLG-------LDNCADILVGDEMIRGISGGQK 150 (1262)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg-------L~~~~~t~vg~~~~~~LSGGqk 150 (1262)
..+ +++++++..| |++..||.+|+ ....||||||
T Consensus 442 --~d~------------------------------------~i~~a~~~~gl~~~i~~lp~Gldt~i~e-~g~~LSGGqr 482 (592)
T PRK10790 442 --SEE------------------------------------QVWQALETVQLAELARSLPDGLYTPLGE-QGNNLSVGQK 482 (592)
T ss_pred --CHH------------------------------------HHHHHHHHcCcHHHHHhccccccccccC-CCCCCCHHHH
Confidence 000 1122233333 56678999986 4567999999
Q ss_pred hhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEEecCc
Q 000838 151 KRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVYQGPR 230 (1262)
Q Consensus 151 qRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~~G~~ 230 (1262)
||++|||||+.+|+|++||||||+||+.++..+.+.|++.. .++| +++++|+. +....||+|++|++|++++.|++
T Consensus 483 QRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~t-vIivtHr~-~~l~~~D~ii~l~~G~i~~~G~~ 558 (592)
T PRK10790 483 QLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTT-LVVIAHRL-STIVEADTILVLHRGQAVEQGTH 558 (592)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCE-EEEEecch-HHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999999999998753 3345 44566765 45667999999999999999999
Q ss_pred chHHH
Q 000838 231 ELVLE 235 (1262)
Q Consensus 231 ~~~~~ 235 (1262)
+++.+
T Consensus 559 ~~L~~ 563 (592)
T PRK10790 559 QQLLA 563 (592)
T ss_pred HHHHh
Confidence 98864
No 496
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.7e-31 Score=297.64 Aligned_cols=189 Identities=20% Similarity=0.378 Sum_probs=150.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC-----CCCceeEEEEECCccCCCC-----cccceEEeeccccCCCCCCCHHHHHHH
Q 000838 1 MTLLLGPPASGKTTFLLALAGKLD-----SSLKVSGRVTYNGHNMGEF-----VPQRTAAYISQHDNHIGEMTVRETLAF 70 (1262)
Q Consensus 1 ~~~i~G~sGsGKSTLL~~l~g~~~-----~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f 70 (1262)
+++|+||||||||||+++|+|+.+ |+ +|+|.++|.++... ..++.++|++|++.+++. ||.||+.+
T Consensus 67 ~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~ 142 (286)
T PRK14275 67 VTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAY 142 (286)
T ss_pred EEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHh
Confidence 479999999999999999999854 35 99999999886431 124579999999888774 99999998
Q ss_pred HHhccCCCcchhhhHHHHHHHHhcCCCCCCchhHHHHHhhhcccchhhhHHHHHHHhCCc----ccccccccCCcccccc
Q 000838 71 SARCQGVGTRYDMLMELARREKAAGIKPDPDIDVYMKAVATEGQEANVITDYYLKVLGLD----NCADILVGDEMIRGIS 146 (1262)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~----~~~~t~vg~~~~~~LS 146 (1262)
+...++... ....++.+.++++.+|+. +..+ +.+..||
T Consensus 143 ~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~l~~~~~-----~~~~~LS 184 (286)
T PRK14275 143 GPRLHGIND---------------------------------KKQLEEIVEKSLRKAALWDEVSDRLD-----KNALGLS 184 (286)
T ss_pred HHHhcCCCc---------------------------------HHHHHHHHHHHHHHhCCccchhhHhh-----CChhhCC
Confidence 654321100 000122345667777774 2233 4567899
Q ss_pred cccchhhHHHHHHhcCCeEEEEeCCCccccHHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHHhccceEEecCCeEEE
Q 000838 147 GGQKKRVTTGEMMVGPALAMFMDEISTGLDSSTTFQIVNCLRQNIHINSETAVISLLQPAPETYNLFDDIILLSDGQIVY 226 (1262)
Q Consensus 147 GGqkqRvsiA~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~i~vl~~G~i~~ 226 (1262)
|||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|++++|+.+++.++||++++|++|+++.
T Consensus 185 gGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~--~~-~tvIivsH~~~~~~~~~d~i~~L~~G~i~~ 261 (286)
T PRK14275 185 GGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELR--GS-YTIMIVTHNMQQASRVSDYTMFFYEGVLVE 261 (286)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999864 23 567779999999999999999999999999
Q ss_pred ecCcchHH
Q 000838 227 QGPRELVL 234 (1262)
Q Consensus 227 ~G~~~~~~ 234 (1262)
.|+++++.
T Consensus 262 ~g~~~~~~ 269 (286)
T PRK14275 262 HAPTAQLF 269 (286)
T ss_pred eCCHHHHH
Confidence 99987763
No 497
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=3.1e-31 Score=293.55 Aligned_cols=195 Identities=27% Similarity=0.389 Sum_probs=149.3
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.+. +.+.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~v~~~g~~~~~ 67 (236)
T cd03253 2 EFENVTFAYD------------PGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYD--VSSGSILIDGQDIRE 67 (236)
T ss_pred EEEEEEEEeC------------CCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCEEEECCEEhhh
Confidence 4677776652 12358999999999999999999999999999999999876 458999999976532
Q ss_pred ---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCCCC
Q 000838 774 ---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSL-------VGLPGVN 843 (1262)
Q Consensus 774 ---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~-------~~~~~~~ 843 (1262)
..+++.++|++|++.+++ .|+.||+.+... ...... +.+.++..++.+..+.. .. ..+.
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~----~~~~~~~~~l~~~~~~l~~~~~~~~~-~~~~ 136 (236)
T cd03253 68 VTLDSLRRAIGVVPQDTVLFN-DTIGYNIRYGRP-----DATDEE----VIEAAKAAQIHDKIMRFPDGYDTIVG-ERGL 136 (236)
T ss_pred CCHHHHHhhEEEECCCChhhc-chHHHHHhhcCC-----CCCHHH----HHHHHHHcCcHHHHHhccccccchhh-cCCC
Confidence 234567999999988775 699999987421 111111 23334444443222111 11 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhhc
Q 000838 844 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEAI 916 (1262)
Q Consensus 844 ~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~ 916 (1262)
.||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++.+ |+|||+++|++.. + +..|+.+
T Consensus 137 ~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~~-~-~~~d~~~ 206 (236)
T cd03253 137 KLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLST-I-VNADKII 206 (236)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHHH-H-HhCCEEE
Confidence 7999999999999999999999999999999999999999999999876 9999999999863 3 4477643
No 498
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=99.97 E-value=1e-30 Score=280.82 Aligned_cols=170 Identities=25% Similarity=0.290 Sum_probs=140.0
Q ss_pred EEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc
Q 000838 694 IFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYPKKH 773 (1262)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 773 (1262)
.++|+++.++ ++.+++|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.+||.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~ 68 (200)
T cd03217 2 EIKDLHVSVG-------------GKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITD 68 (200)
T ss_pred eEEEEEEEeC-------------CEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCc
Confidence 4677776653 246999999999999999999999999999999999974212468999999987643
Q ss_pred c---c-ccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000838 774 E---T-FARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPLRQSLVGLPGVNGLSTEQ 849 (1262)
Q Consensus 774 ~---~-~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGq 849 (1262)
. . .++.++|++|++.+++..|+++++. .. ...|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~~~~~~l~----------------------------------~~-----~~~LS~G~ 109 (200)
T cd03217 69 LPPEERARLGIFLAFQYPPEIPGVKNADFLR----------------------------------YV-----NEGFSGGE 109 (200)
T ss_pred CCHHHHhhCcEEEeecChhhccCccHHHHHh----------------------------------hc-----cccCCHHH
Confidence 1 2 2345999999988888888877650 00 13699999
Q ss_pred HHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHH-Hhhhhc
Q 000838 850 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE-SFDEAI 916 (1262)
Q Consensus 850 rqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~-~fd~~~ 916 (1262)
|||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||++. .+.+ .+|+..
T Consensus 110 ~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~-~~~~~~~d~i~ 176 (200)
T cd03217 110 KKRNEILQLLLLEPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQR-LLDYIKPDRVH 176 (200)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhhCCEEE
Confidence 99999999999999999999999999999999999999999877899999999975 3444 577753
No 499
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=99.97 E-value=6.5e-31 Score=295.24 Aligned_cols=213 Identities=29% Similarity=0.402 Sum_probs=174.2
Q ss_pred ccCCCCCCCCCcEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCe
Q 000838 680 KKRGMVLPFEPHSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY 759 (1262)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~ 759 (1262)
....+.+|.+...+.++++++..+. .++.+|+|+||.+++||.+||+||||||||||.++|.|... +
T Consensus 322 ~~~~m~LP~P~g~L~Ve~l~~~PPg-----------~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~--p 388 (580)
T COG4618 322 AAERMPLPAPQGALSVERLTAAPPG-----------QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWP--P 388 (580)
T ss_pred ccCCCCCCCCCceeeEeeeeecCCC-----------CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccc--c
Confidence 3445677888889999999884321 34689999999999999999999999999999999999876 4
Q ss_pred eEEEEEECCccCC---cccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHH-----HHHHHHHHHcCCcc
Q 000838 760 ITGSIKISGYPKK---HETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRK-----MFIEEIMELVELNP 831 (1262)
Q Consensus 760 ~~G~i~~~g~~~~---~~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l~l~~ 831 (1262)
.+|.|.+||.+.+ .+.+-+.+||.||+-.+++ -||.||+. + ...+.+.+..- ..+.+++ +.+.+
T Consensus 389 ~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa---R--f~~~~d~~kIieAA~lAgvHelI--l~lP~ 460 (580)
T COG4618 389 TSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA---R--FGEEADPEKVIEAARLAGVHELI--LRLPQ 460 (580)
T ss_pred CCCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH---h--ccccCCHHHHHHHHHHcChHHHH--HhCcC
Confidence 6899999998864 3456789999999999987 59999995 2 22233332211 1122222 45666
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH
Q 000838 832 LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFES 911 (1262)
Q Consensus 832 ~~~~~~~~~~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~ 911 (1262)
-.|+.+|.. ...||||||||+++||||-.+|.+++||||-|+||......+.+.|.+.+++|.|+|+++|.|+ +...
T Consensus 461 GYdT~iG~~-G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs--~L~~ 537 (580)
T COG4618 461 GYDTRIGEG-GATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPS--ALAS 537 (580)
T ss_pred CccCccCCC-CCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHH--HHhh
Confidence 778888864 5689999999999999999999999999999999999999999999999999999999999986 8888
Q ss_pred hhhhc
Q 000838 912 FDEAI 916 (1262)
Q Consensus 912 fd~~~ 916 (1262)
.|+..
T Consensus 538 ~Dkil 542 (580)
T COG4618 538 VDKIL 542 (580)
T ss_pred cceee
Confidence 99854
No 500
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=99.97 E-value=4.3e-31 Score=327.27 Aligned_cols=198 Identities=30% Similarity=0.448 Sum_probs=163.8
Q ss_pred cEEEEeeeEEEEecchhhhhccccCCceEEeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 000838 691 HSLIFDEVTYSVDMPQEMKLQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGSIKISGYP 770 (1262)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 770 (1262)
..+.++|++++++. .++.+|+|+|++++|||.++|+||||||||||+|+|+|..+ +.+|+|.+||.+
T Consensus 319 ~~i~~~~v~f~y~~-----------~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~--~~~G~I~~~g~~ 385 (529)
T TIGR02857 319 PSLEFSGLSVAYPG-----------RRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVD--PTEGSIAVNGVP 385 (529)
T ss_pred CeEEEEEEEEECCC-----------CCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEe
Confidence 36899999999852 12358999999999999999999999999999999999877 458999999988
Q ss_pred CCc---ccccceEEEecCCCCCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000838 771 KKH---ETFARISGYCEQNDIHSPFVTVHESLAFSAWLRLAPEVDSETRKMFIEEIMELVELNPL-------RQSLVGLP 840 (1262)
Q Consensus 771 ~~~---~~~~~~~~~v~q~~~~~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 840 (1262)
... ..+++.++||+|++.+++ .|++||+.++. ++.++ +.++++++..++.+. .|+.+|.
T Consensus 386 i~~~~~~~lr~~i~~v~Q~~~lf~-~ti~~Ni~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~Gldt~v~e- 454 (529)
T TIGR02857 386 LADADADSWRDQIAWVPQHPFLFA-GTIAENIRLAR-----PDASD----AEIRRALERAGLDEFVAALPQGLDTLIGE- 454 (529)
T ss_pred hhhCCHHHHHhheEEEcCCCcccC-cCHHHHHhccC-----CCCCH----HHHHHHHHHcCcHHHHHhCcccccchhcc-
Confidence 643 456788999999999886 69999998742 12222 236677787777653 3555554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcceeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhh
Q 000838 841 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEA 915 (1262)
Q Consensus 841 ~~~~lSgGqrqrl~ia~al~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 915 (1262)
....||||||||++||||++++|++++||||||+||+.+++.+.+.|+++. +++|+|+++|+++ ....+|++
T Consensus 455 ~g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~i 526 (529)
T TIGR02857 455 GGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALA-QGRTVLLVTHRLA--LAERADRI 526 (529)
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhc-CCCEEEEEecCHH--HHHhCCEE
Confidence 345799999999999999999999999999999999999999999999875 5899999999974 45677764
Done!