Query 000845
Match_columns 1255
No_of_seqs 494 out of 5187
Neff 8.5
Searched_HMMs 46136
Date Tue Apr 2 00:22:38 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000845.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000845hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 8E-246 2E-250 2284.5 135.1 1196 47-1250 120-1379(1381)
2 PLN03130 ABC transporter C fam 100.0 7E-196 2E-200 1946.3 150.2 1194 44-1251 221-1479(1622)
3 PLN03232 ABC transporter C fam 100.0 3E-192 7E-197 1915.7 149.7 1196 43-1252 220-1477(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 3E-190 7E-195 1898.7 150.2 1190 48-1247 200-1521(1522)
5 TIGR01271 CFTR_protein cystic 100.0 4E-187 8E-192 1862.5 147.7 1187 48-1252 2-1458(1490)
6 PTZ00243 ABC transporter; Prov 100.0 3E-180 6E-185 1795.0 147.1 1199 46-1251 56-1551(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 3E-150 6E-155 1381.1 108.8 1089 132-1247 33-1226(1228)
8 PTZ00265 multidrug resistance 100.0 1E-131 2E-136 1315.0 135.3 1114 117-1246 50-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 1.4E-94 2.9E-99 843.4 60.5 562 674-1247 135-705 (716)
10 COG2274 SunT ABC-type bacterio 100.0 4E-86 8.7E-91 810.0 66.6 544 692-1246 158-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 1.2E-80 2.5E-85 773.6 68.3 544 692-1248 18-566 (567)
12 PRK11174 cysteine/glutathione 100.0 5.1E-80 1.1E-84 772.6 69.8 558 675-1246 11-584 (588)
13 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.2E-78 2.7E-83 771.3 71.2 555 674-1245 123-684 (686)
14 TIGR00958 3a01208 Conjugate Tr 100.0 6.9E-79 1.5E-83 771.9 66.7 551 676-1243 151-711 (711)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.1E-78 1.3E-82 768.6 68.1 558 674-1243 142-709 (710)
16 KOG0055 Multidrug/pheromone ex 100.0 2.4E-79 5.1E-84 754.4 51.6 513 723-1247 71-589 (1228)
17 PRK10790 putative multidrug tr 100.0 2.4E-77 5.3E-82 748.4 70.6 543 693-1249 28-578 (592)
18 TIGR01193 bacteriocin_ABC ABC- 100.0 1.1E-77 2.3E-82 765.4 67.6 556 674-1244 144-707 (708)
19 COG4987 CydC ABC-type transpor 100.0 1.2E-77 2.6E-82 676.1 59.6 501 731-1244 66-571 (573)
20 PRK11160 cysteine/glutathione 100.0 6.9E-77 1.5E-81 737.7 70.0 556 676-1245 6-573 (574)
21 COG4988 CydD ABC-type transpor 100.0 1.2E-76 2.5E-81 681.9 64.1 512 722-1247 39-556 (559)
22 PRK11176 lipid transporter ATP 100.0 1.1E-76 2.4E-81 742.3 69.6 507 729-1247 71-580 (582)
23 KOG0056 Heavy metal exporter H 100.0 4.2E-79 9E-84 668.4 40.1 534 699-1247 226-775 (790)
24 TIGR03375 type_I_sec_LssB type 100.0 3.1E-76 6.8E-81 750.3 69.4 548 674-1234 135-689 (694)
25 TIGR01846 type_I_sec_HlyB type 100.0 5.1E-75 1.1E-79 738.3 70.1 559 674-1246 127-692 (694)
26 TIGR02203 MsbA_lipidA lipid A 100.0 1.2E-74 2.7E-79 723.3 69.5 542 693-1246 19-568 (571)
27 PRK13657 cyclic beta-1,2-gluca 100.0 8.5E-74 1.8E-78 715.1 71.3 549 692-1251 23-575 (588)
28 KOG0057 Mitochondrial Fe/S clu 100.0 2.6E-74 5.6E-79 649.2 56.5 510 723-1246 74-586 (591)
29 TIGR02868 CydC thiol reductant 100.0 1.9E-73 4.1E-78 704.3 64.2 504 693-1205 18-529 (529)
30 TIGR02204 MsbA_rel ABC transpo 100.0 8.2E-73 1.8E-77 707.1 69.1 559 676-1245 8-574 (576)
31 PRK10789 putative multidrug tr 100.0 6.6E-73 1.4E-77 702.2 66.7 511 726-1248 39-552 (569)
32 TIGR01192 chvA glucan exporter 100.0 2.8E-72 6.1E-77 697.2 70.7 543 692-1246 23-570 (585)
33 COG5265 ATM1 ABC-type transpor 100.0 6.2E-74 1.4E-78 624.7 39.7 489 745-1244 4-496 (497)
34 TIGR02857 CydD thiol reductant 100.0 1.7E-71 3.6E-76 687.0 65.6 514 693-1217 8-529 (529)
35 PTZ00265 multidrug resistance 100.0 3E-70 6.5E-75 727.4 66.5 546 692-1247 64-729 (1466)
36 TIGR01842 type_I_sec_PrtD type 100.0 3.1E-69 6.8E-74 667.1 68.5 524 693-1234 11-543 (544)
37 TIGR01194 cyc_pep_trnsptr cycl 100.0 5.7E-67 1.2E-71 646.4 66.0 533 675-1225 6-551 (555)
38 KOG0058 Peptide exporter, ABC 100.0 3.1E-66 6.8E-71 605.4 58.0 496 121-624 141-706 (716)
39 COG1123 ATPase components of v 100.0 4.3E-67 9.3E-72 606.8 39.6 227 1003-1246 280-532 (539)
40 PLN03232 ABC transporter C fam 100.0 9.4E-64 2E-68 672.8 66.9 474 748-1247 366-841 (1495)
41 PLN03130 ABC transporter C fam 100.0 1.4E-63 3E-68 670.0 67.9 473 748-1247 366-841 (1622)
42 PRK10522 multidrug transporter 100.0 4.1E-63 9E-68 612.4 65.5 475 732-1233 57-539 (547)
43 PRK11174 cysteine/glutathione 100.0 6E-62 1.3E-66 609.6 66.2 499 116-623 11-585 (588)
44 COG2274 SunT ABC-type bacterio 100.0 3.8E-61 8.2E-66 589.9 66.0 503 114-621 141-707 (709)
45 PRK10261 glutathione transport 100.0 3.8E-63 8.3E-68 617.5 43.6 230 1003-1245 313-566 (623)
46 COG4618 ArpD ABC-type protease 100.0 1.1E-61 2.5E-66 540.8 50.2 521 698-1234 33-561 (580)
47 PRK15134 microcin C ABC transp 100.0 3.4E-63 7.4E-68 610.7 39.4 217 1003-1236 275-518 (529)
48 COG4172 ABC-type uncharacteriz 100.0 3.9E-62 8.4E-67 527.7 34.9 224 1003-1243 276-526 (534)
49 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.8E-59 1.3E-63 594.1 67.1 497 117-619 144-709 (710)
50 TIGR03269 met_CoM_red_A2 methy 100.0 1E-61 2.2E-66 597.0 38.2 219 1003-1233 279-517 (520)
51 TIGR00958 3a01208 Conjugate Tr 100.0 1.2E-58 2.5E-63 587.2 66.0 490 123-618 157-710 (711)
52 PRK13549 xylose transporter AT 100.0 1.3E-61 2.8E-66 593.4 37.6 218 1003-1232 259-493 (506)
53 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2E-58 4.3E-63 586.4 67.6 496 115-620 124-683 (686)
54 PRK09700 D-allose transporter 100.0 3.3E-61 7.2E-66 591.0 39.4 212 1003-1230 265-495 (510)
55 TIGR00956 3a01205 Pleiotropic 100.0 7.4E-60 1.6E-64 628.2 54.1 251 964-1230 719-990 (1394)
56 TIGR03375 type_I_sec_LssB type 100.0 3.1E-58 6.6E-63 585.4 66.6 489 115-610 135-688 (694)
57 TIGR00957 MRP_assoc_pro multi 100.0 4.2E-58 9.2E-63 619.0 69.1 527 695-1246 324-862 (1522)
58 PRK15439 autoinducer 2 ABC tra 100.0 7.4E-61 1.6E-65 586.0 37.7 212 1003-1234 268-493 (510)
59 PRK15064 ABC transporter ATP-b 100.0 1.2E-59 2.5E-64 579.4 47.3 201 1002-1234 318-526 (530)
60 TIGR01257 rim_protein retinal- 100.0 3.9E-58 8.4E-63 606.1 62.6 220 1002-1235 1936-2161(2272)
61 TIGR01193 bacteriocin_ABC ABC- 100.0 2.3E-57 5E-62 578.7 67.6 493 118-619 147-706 (708)
62 PRK11288 araG L-arabinose tran 100.0 1.3E-60 2.8E-65 583.9 36.0 212 1003-1232 257-484 (501)
63 PRK10762 D-ribose transporter 100.0 1.3E-60 2.8E-65 583.9 35.9 211 1003-1232 257-483 (501)
64 KOG0054 Multidrug resistance-a 100.0 9.1E-58 2E-62 578.2 62.3 488 736-1247 255-744 (1381)
65 PRK10938 putative molybdenum t 100.0 4E-60 8.7E-65 579.0 38.8 207 1003-1227 260-486 (490)
66 TIGR02633 xylG D-xylose ABC tr 100.0 5.7E-60 1.2E-64 579.2 38.0 217 1003-1231 257-490 (500)
67 PRK11176 lipid transporter ATP 100.0 1.5E-56 3.2E-61 560.7 67.6 498 118-621 16-578 (582)
68 PRK10982 galactose/methyl gala 100.0 1.9E-59 4.1E-64 572.7 38.6 212 1003-1231 250-478 (491)
69 TIGR00954 3a01203 Peroxysomal 100.0 3.1E-57 6.6E-62 566.4 58.6 521 676-1219 81-653 (659)
70 PRK11819 putative ABC transpor 100.0 4.1E-58 8.8E-63 567.1 48.5 202 1002-1234 323-534 (556)
71 TIGR02203 MsbA_lipidA lipid A 100.0 6.2E-56 1.3E-60 554.7 67.3 496 119-620 6-566 (571)
72 PRK10636 putative ABC transpor 100.0 4.4E-58 9.5E-63 572.0 47.0 198 1003-1232 312-516 (638)
73 PRK10790 putative multidrug tr 100.0 1.1E-55 2.3E-60 553.1 68.0 493 120-622 16-575 (592)
74 PLN03073 ABC transporter F fam 100.0 8E-58 1.7E-62 569.2 48.0 199 1002-1231 507-712 (718)
75 PRK10789 putative multidrug tr 100.0 6.5E-56 1.4E-60 550.3 64.8 482 136-622 4-550 (569)
76 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.1E-57 2.4E-62 563.3 48.6 200 1003-1233 322-531 (552)
77 PRK11160 cysteine/glutathione 100.0 1.5E-55 3.2E-60 547.0 67.0 494 121-620 10-572 (574)
78 PRK11147 ABC transporter ATPas 100.0 1.2E-57 2.7E-62 570.0 47.3 199 1003-1232 319-527 (635)
79 COG4988 CydD ABC-type transpor 100.0 2.3E-55 4.9E-60 506.0 62.0 482 132-623 5-556 (559)
80 TIGR02204 MsbA_rel ABC transpo 100.0 1.9E-55 4.1E-60 550.5 66.9 501 117-620 8-573 (576)
81 TIGR01846 type_I_sec_HlyB type 100.0 5.2E-55 1.1E-59 555.2 68.5 501 115-621 127-691 (694)
82 COG1132 MdlB ABC-type multidru 100.0 1.1E-54 2.3E-59 540.8 66.3 487 125-622 13-564 (567)
83 PRK13657 cyclic beta-1,2-gluca 100.0 1.3E-54 2.8E-59 542.3 67.1 491 121-622 13-570 (588)
84 TIGR01842 type_I_sec_PrtD type 100.0 9E-55 2E-59 538.3 62.5 474 124-610 3-542 (544)
85 TIGR01192 chvA glucan exporter 100.0 8.2E-54 1.8E-58 532.0 68.3 491 121-622 13-570 (585)
86 TIGR01271 CFTR_protein cystic 100.0 2.5E-54 5.3E-59 580.5 67.4 516 698-1244 90-646 (1490)
87 TIGR02868 CydC thiol reductant 100.0 8.4E-54 1.8E-58 529.3 62.1 459 120-582 6-529 (529)
88 KOG0057 Mitochondrial Fe/S clu 100.0 5.3E-54 1.1E-58 484.9 53.7 473 139-621 42-585 (591)
89 TIGR02857 CydD thiol reductant 100.0 1.9E-53 4.1E-58 526.1 60.8 462 126-594 2-529 (529)
90 PLN03140 ABC transporter G fam 100.0 2.8E-54 6.1E-59 571.2 54.6 215 1003-1229 867-1106(1470)
91 COG0488 Uup ATPase components 100.0 5.9E-55 1.3E-59 518.9 41.5 203 1001-1234 319-526 (530)
92 PTZ00243 ABC transporter; Prov 100.0 8.6E-53 1.9E-57 565.3 65.7 528 695-1245 251-880 (1560)
93 PRK13409 putative ATPase RIL; 100.0 8E-54 1.7E-58 525.0 36.6 191 1003-1227 340-536 (590)
94 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.3E-54 4.9E-59 481.9 27.3 239 1002-1248 1-239 (275)
95 KOG0056 Heavy metal exporter H 100.0 1.1E-53 2.3E-58 468.8 31.5 482 134-623 222-775 (790)
96 COG4987 CydC ABC-type transpor 100.0 2.8E-50 6E-55 454.7 59.2 498 116-620 6-571 (573)
97 TIGR01194 cyc_pep_trnsptr cycl 100.0 8.2E-50 1.8E-54 493.7 62.1 475 115-602 6-551 (555)
98 PRK10522 multidrug transporter 100.0 2.1E-48 4.6E-53 481.3 61.2 470 117-602 3-530 (547)
99 COG1129 MglA ABC-type sugar tr 100.0 9.1E-50 2E-54 460.0 36.3 213 1003-1230 263-487 (500)
100 COG4618 ArpD ABC-type protease 100.0 1.2E-47 2.6E-52 428.6 49.2 482 115-610 11-560 (580)
101 PRK14257 phosphate ABC transpo 100.0 7.6E-50 1.6E-54 457.2 27.6 233 996-1236 73-316 (329)
102 COG1126 GlnQ ABC-type polar am 100.0 4.8E-49 1.1E-53 397.1 23.5 226 1003-1243 2-236 (240)
103 COG5265 ATM1 ABC-type transpor 100.0 1.3E-47 2.8E-52 418.9 36.2 413 201-619 15-495 (497)
104 COG3845 ABC-type uncharacteriz 100.0 7.6E-47 1.6E-51 424.6 34.2 223 1001-1230 255-489 (501)
105 KOG0927 Predicted transporter 100.0 4.7E-48 1E-52 434.3 24.1 194 1003-1225 389-587 (614)
106 COG1135 AbcC ABC-type metal io 100.0 9.1E-48 2E-52 407.8 21.4 230 1004-1246 2-245 (339)
107 TIGR00954 3a01203 Peroxysomal 100.0 2.1E-43 4.5E-48 441.9 53.3 458 128-596 97-653 (659)
108 cd03288 ABCC_SUR2 The SUR doma 100.0 1.3E-45 2.7E-50 412.1 28.7 240 1000-1245 16-255 (257)
109 COG1117 PstB ABC-type phosphat 100.0 1.3E-46 2.9E-51 376.9 18.5 224 1002-1236 6-240 (253)
110 COG1125 OpuBA ABC-type proline 100.0 1.5E-46 3.3E-51 385.6 19.1 222 1004-1240 2-232 (309)
111 cd03252 ABCC_Hemolysin The ABC 100.0 8.5E-45 1.9E-49 401.5 26.9 234 1004-1244 1-235 (237)
112 cd03244 ABCC_MRP_domain2 Domai 100.0 2.4E-44 5.2E-49 393.7 26.0 221 1002-1228 1-221 (221)
113 cd03251 ABCC_MsbA MsbA is an e 100.0 2.3E-43 4.9E-48 389.6 26.2 232 1004-1242 1-233 (234)
114 COG1124 DppF ABC-type dipeptid 100.0 9.5E-44 2.1E-48 367.3 20.7 226 1003-1245 3-243 (252)
115 COG1127 Ttg2A ABC-type transpo 100.0 2.6E-43 5.7E-48 361.3 21.9 229 1002-1245 7-247 (263)
116 TIGR02314 ABC_MetN D-methionin 100.0 2.3E-43 4.9E-48 403.9 24.0 228 1004-1244 2-242 (343)
117 cd03253 ABCC_ATM1_transporter 100.0 6.6E-43 1.4E-47 386.4 26.8 233 1004-1244 1-234 (236)
118 COG1120 FepC ABC-type cobalami 100.0 1.8E-43 3.9E-48 378.5 21.1 214 1003-1234 2-229 (258)
119 cd03254 ABCC_Glucan_exporter_l 100.0 6.2E-43 1.3E-47 384.7 26.0 226 1002-1234 1-227 (229)
120 KOG0062 ATPase component of AB 100.0 1.8E-42 3.8E-47 387.4 29.5 192 1001-1224 360-559 (582)
121 cd03369 ABCC_NFT1 Domain 2 of 100.0 6.6E-43 1.4E-47 377.9 25.2 207 998-1228 1-207 (207)
122 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.4E-42 3E-47 384.2 26.2 233 1004-1243 1-235 (238)
123 COG3839 MalK ABC-type sugar tr 100.0 5.6E-43 1.2E-47 389.1 22.4 221 1003-1240 3-230 (338)
124 COG2884 FtsE Predicted ATPase 100.0 2.8E-43 6.1E-48 346.6 17.4 211 1004-1228 2-221 (223)
125 COG1122 CbiO ABC-type cobalt t 100.0 5.7E-43 1.2E-47 376.2 20.7 219 1003-1235 3-230 (235)
126 cd03245 ABCC_bacteriocin_expor 100.0 2.5E-42 5.4E-47 377.5 25.4 219 1002-1226 1-220 (220)
127 COG4615 PvdE ABC-type sideroph 100.0 1.3E-39 2.9E-44 351.4 45.4 470 724-1226 49-530 (546)
128 PRK13631 cbiO cobalt transport 100.0 1.9E-42 4.2E-47 395.1 25.1 221 1001-1234 19-266 (320)
129 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.2E-42 2.6E-47 369.8 21.4 209 1003-1234 4-228 (254)
130 COG3638 ABC-type phosphate/pho 100.0 1.6E-42 3.6E-47 354.6 20.2 224 1003-1244 3-245 (258)
131 COG1136 SalX ABC-type antimicr 100.0 4.3E-42 9.4E-47 360.6 23.1 204 1004-1224 2-222 (226)
132 PRK14250 phosphate ABC transpo 100.0 9.9E-42 2.2E-46 377.1 25.9 225 1003-1246 3-234 (241)
133 cd03261 ABC_Org_Solvent_Resist 100.0 3.7E-42 7.9E-47 379.8 22.2 216 1004-1234 1-227 (235)
134 cd03260 ABC_PstB_phosphate_tra 100.0 3.7E-42 8.1E-47 377.8 21.5 211 1004-1231 1-227 (227)
135 COG3842 PotA ABC-type spermidi 100.0 2.6E-42 5.7E-47 385.9 20.3 222 1002-1240 4-233 (352)
136 PRK11650 ugpC glycerol-3-phosp 100.0 1.5E-41 3.3E-46 392.5 25.8 222 1003-1240 3-231 (356)
137 PRK14269 phosphate ABC transpo 100.0 1.6E-41 3.4E-46 377.0 24.9 219 1003-1236 2-233 (246)
138 PRK11432 fbpC ferric transport 100.0 1.6E-41 3.5E-46 391.0 24.8 222 1002-1240 5-233 (351)
139 PRK11153 metN DL-methionine tr 100.0 1.6E-41 3.4E-46 392.4 24.6 224 1004-1240 2-237 (343)
140 COG3840 ThiQ ABC-type thiamine 100.0 1.9E-41 4.1E-46 330.3 21.1 210 1004-1236 2-222 (231)
141 COG4178 ABC-type uncharacteriz 100.0 2E-38 4.3E-43 372.9 50.6 469 724-1219 87-588 (604)
142 PRK13650 cbiO cobalt transport 100.0 1.7E-41 3.7E-46 382.5 23.5 215 1003-1234 4-230 (279)
143 cd03248 ABCC_TAP TAP, the Tran 100.0 2.7E-41 5.9E-46 370.7 23.2 216 1001-1222 9-226 (226)
144 cd03263 ABC_subfamily_A The AB 100.0 2.9E-41 6.4E-46 369.0 22.2 210 1004-1231 1-219 (220)
145 TIGR01186 proV glycine betaine 100.0 2.1E-41 4.6E-46 389.4 21.9 209 1018-1239 6-225 (363)
146 PRK13637 cbiO cobalt transport 100.0 3.6E-41 7.9E-46 381.1 23.4 220 1004-1234 3-235 (287)
147 PRK13647 cbiO cobalt transport 100.0 3.5E-41 7.5E-46 379.0 23.1 212 1003-1232 4-226 (274)
148 TIGR03265 PhnT2 putative 2-ami 100.0 3.6E-41 7.9E-46 388.9 23.5 221 1003-1240 4-231 (353)
149 COG1116 TauB ABC-type nitrate/ 100.0 3.7E-41 8.1E-46 352.4 21.3 223 1003-1246 3-237 (248)
150 cd03296 ABC_CysA_sulfate_impor 100.0 6.3E-41 1.4E-45 370.7 24.4 216 1004-1236 3-229 (239)
151 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.5E-40 5.4E-45 370.5 29.2 219 1001-1243 37-256 (282)
152 PRK10744 pstB phosphate transp 100.0 1E-40 2.2E-45 373.4 25.8 220 1001-1235 11-246 (260)
153 PRK13635 cbiO cobalt transport 100.0 5.7E-41 1.2E-45 378.0 23.7 219 1003-1234 5-230 (279)
154 TIGR00972 3a0107s01c2 phosphat 100.0 6.8E-41 1.5E-45 372.4 24.0 225 1004-1239 2-238 (247)
155 PRK14273 phosphate ABC transpo 100.0 7E-41 1.5E-45 373.9 23.9 222 1003-1239 7-244 (254)
156 TIGR00960 3a0501s02 Type II (G 100.0 3.3E-41 7.2E-46 367.3 20.6 202 1004-1222 2-216 (216)
157 PRK10851 sulfate/thiosulfate t 100.0 8.4E-41 1.8E-45 385.9 25.1 220 1003-1239 2-232 (353)
158 cd03256 ABC_PhnC_transporter A 100.0 4.8E-41 1E-45 373.0 22.2 211 1004-1232 1-233 (241)
159 PRK14242 phosphate transporter 100.0 9.2E-41 2E-45 372.9 24.5 219 1003-1236 6-240 (253)
160 cd03250 ABCC_MRP_domain1 Domai 100.0 8.5E-41 1.8E-45 360.5 23.1 199 1004-1221 1-204 (204)
161 cd03219 ABC_Mj1267_LivG_branch 100.0 5.7E-41 1.2E-45 371.0 22.0 216 1004-1234 1-233 (236)
162 cd03258 ABC_MetN_methionine_tr 100.0 6.7E-41 1.5E-45 369.4 22.3 214 1004-1234 2-231 (233)
163 PRK13643 cbiO cobalt transport 100.0 7.6E-41 1.6E-45 378.7 23.1 218 1004-1234 2-234 (288)
164 TIGR03258 PhnT 2-aminoethylpho 100.0 6.5E-41 1.4E-45 387.0 23.0 223 1001-1240 3-235 (362)
165 cd03295 ABC_OpuCA_Osmoprotecti 100.0 7.3E-41 1.6E-45 371.0 22.4 221 1004-1236 1-228 (242)
166 PRK13646 cbiO cobalt transport 100.0 1.5E-40 3.1E-45 376.4 24.9 219 1003-1234 2-236 (286)
167 PRK14235 phosphate transporter 100.0 1.8E-40 3.8E-45 372.5 25.3 222 1000-1236 16-254 (267)
168 cd03224 ABC_TM1139_LivF_branch 100.0 9E-41 2E-45 365.9 22.4 216 1004-1233 1-221 (222)
169 PRK14259 phosphate ABC transpo 100.0 2.2E-40 4.9E-45 371.8 25.8 222 1000-1236 10-256 (269)
170 TIGR02315 ABC_phnC phosphonate 100.0 8.8E-41 1.9E-45 371.2 22.3 211 1004-1232 2-234 (243)
171 PRK09452 potA putrescine/sperm 100.0 1.8E-40 3.9E-45 384.6 25.6 221 1002-1239 13-240 (375)
172 cd03259 ABC_Carb_Solutes_like 100.0 6.7E-41 1.4E-45 364.1 20.6 202 1004-1226 1-213 (213)
173 PRK13636 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 376.4 23.3 218 1003-1234 5-232 (283)
174 PRK14267 phosphate ABC transpo 100.0 1.4E-40 3E-45 371.5 23.5 226 1003-1239 4-243 (253)
175 PRK11000 maltose/maltodextrin 100.0 1.3E-40 2.8E-45 387.7 23.8 221 1003-1240 3-230 (369)
176 PRK15079 oligopeptide ABC tran 100.0 1.9E-40 4E-45 380.1 24.7 227 1003-1241 8-259 (331)
177 PRK11629 lolD lipoprotein tran 100.0 1.5E-40 3.2E-45 366.3 22.7 208 1003-1227 5-228 (233)
178 PRK14247 phosphate ABC transpo 100.0 2.1E-40 4.6E-45 369.3 24.2 222 1003-1239 3-240 (250)
179 PRK13632 cbiO cobalt transport 100.0 2.1E-40 4.7E-45 372.6 24.3 219 1003-1234 7-232 (271)
180 PRK09536 btuD corrinoid ABC tr 100.0 1.6E-40 3.6E-45 386.6 23.7 213 1003-1234 3-229 (402)
181 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.1E-40 2.4E-45 374.2 21.5 218 1005-1241 26-258 (269)
182 PRK13634 cbiO cobalt transport 100.0 1.5E-40 3.3E-45 376.6 22.6 220 1003-1234 2-236 (290)
183 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4E-40 8.7E-45 363.6 25.2 215 1004-1234 2-222 (236)
184 PRK13537 nodulation ABC transp 100.0 1.6E-40 3.5E-45 378.2 22.5 217 1002-1234 6-228 (306)
185 PRK13642 cbiO cobalt transport 100.0 2.5E-40 5.5E-45 373.0 23.7 219 1003-1234 4-230 (277)
186 cd03247 ABCC_cytochrome_bd The 100.0 2E-40 4.3E-45 349.1 21.3 178 1004-1226 1-178 (178)
187 PRK13651 cobalt transporter AT 100.0 2.3E-40 4.9E-45 376.0 23.3 218 1004-1234 3-255 (305)
188 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.1E-40 2.4E-45 363.9 20.0 202 1004-1222 1-218 (218)
189 PRK11831 putative ABC transpor 100.0 3E-40 6.6E-45 371.0 24.0 227 1003-1244 7-244 (269)
190 cd03266 ABC_NatA_sodium_export 100.0 2E-40 4.4E-45 361.8 21.9 205 1004-1226 2-218 (218)
191 TIGR03005 ectoine_ehuA ectoine 100.0 3.5E-40 7.6E-45 367.8 23.9 214 1004-1236 1-239 (252)
192 PRK14244 phosphate ABC transpo 100.0 1.6E-40 3.5E-45 370.3 21.2 221 1004-1239 6-243 (251)
193 PRK14274 phosphate ABC transpo 100.0 4.6E-40 1E-44 368.2 24.9 225 1003-1238 12-248 (259)
194 PRK14237 phosphate transporter 100.0 5.1E-40 1.1E-44 368.7 25.3 220 1002-1236 19-254 (267)
195 PRK14251 phosphate ABC transpo 100.0 2.7E-40 5.9E-45 368.7 23.0 227 1003-1239 4-241 (251)
196 PRK14245 phosphate ABC transpo 100.0 2.9E-40 6.4E-45 368.0 23.0 220 1003-1237 3-238 (250)
197 PRK14268 phosphate ABC transpo 100.0 3.1E-40 6.8E-45 369.1 23.1 226 1003-1239 12-248 (258)
198 PRK13640 cbiO cobalt transport 100.0 3.7E-40 8.1E-45 372.3 23.9 220 1002-1234 4-233 (282)
199 PRK11308 dppF dipeptide transp 100.0 4.9E-40 1.1E-44 376.5 25.2 228 1003-1242 5-253 (327)
200 cd03265 ABC_DrrA DrrA is the A 100.0 3.1E-40 6.8E-45 360.6 22.5 208 1004-1231 1-219 (220)
201 PRK14239 phosphate transporter 100.0 4.1E-40 8.8E-45 367.7 23.9 223 1003-1236 5-239 (252)
202 cd03264 ABC_drug_resistance_li 100.0 2.2E-40 4.8E-45 359.5 21.0 202 1004-1226 1-211 (211)
203 cd03268 ABC_BcrA_bacitracin_re 100.0 3.3E-40 7.1E-45 357.3 22.1 202 1004-1226 1-208 (208)
204 PRK13652 cbiO cobalt transport 100.0 4.1E-40 8.9E-45 371.3 23.6 218 1003-1234 3-228 (277)
205 cd03226 ABC_cobalt_CbiO_domain 100.0 2.3E-40 4.9E-45 357.5 20.6 198 1005-1223 1-205 (205)
206 PRK14262 phosphate ABC transpo 100.0 4.3E-40 9.2E-45 366.9 23.3 228 1003-1241 3-242 (250)
207 PRK14240 phosphate transporter 100.0 5.9E-40 1.3E-44 365.7 24.5 222 1002-1238 2-239 (250)
208 PRK11607 potG putrescine trans 100.0 4.6E-40 1E-44 382.0 24.1 222 1002-1240 18-246 (377)
209 PRK13644 cbiO cobalt transport 100.0 5.5E-40 1.2E-44 369.3 24.0 217 1004-1234 2-225 (274)
210 PRK10619 histidine/lysine/argi 100.0 5.9E-40 1.3E-44 366.9 24.1 218 1001-1236 3-244 (257)
211 PRK14256 phosphate ABC transpo 100.0 8E-40 1.7E-44 365.0 25.0 227 1001-1238 2-241 (252)
212 PRK14248 phosphate ABC transpo 100.0 7.6E-40 1.6E-44 368.1 25.0 219 1003-1236 21-255 (268)
213 PRK09473 oppD oligopeptide tra 100.0 7E-40 1.5E-44 375.7 24.9 231 1003-1243 12-261 (330)
214 PRK10070 glycine betaine trans 100.0 5.7E-40 1.2E-44 381.8 24.4 204 1019-1239 42-260 (400)
215 PRK11264 putative amino-acid A 100.0 1.3E-39 2.8E-44 363.3 26.1 219 1003-1236 3-236 (250)
216 TIGR02769 nickel_nikE nickel i 100.0 7.1E-40 1.5E-44 367.5 24.2 224 1004-1243 3-250 (265)
217 TIGR03411 urea_trans_UrtD urea 100.0 5.2E-40 1.1E-44 364.5 22.9 212 1003-1233 2-231 (242)
218 PRK14238 phosphate transporter 100.0 1.3E-39 2.7E-44 366.1 26.2 227 1001-1237 22-259 (271)
219 PRK14249 phosphate ABC transpo 100.0 1.1E-39 2.3E-44 363.7 25.3 223 1003-1236 4-238 (251)
220 PRK10575 iron-hydroxamate tran 100.0 4.7E-40 1E-44 368.9 22.5 212 1003-1233 11-237 (265)
221 cd03218 ABC_YhbG The ABC trans 100.0 6.7E-40 1.5E-44 361.4 23.4 215 1004-1233 1-222 (232)
222 TIGR02211 LolD_lipo_ex lipopro 100.0 6.3E-40 1.4E-44 358.8 23.0 203 1004-1223 2-220 (221)
223 PRK13633 cobalt transporter AT 100.0 7.1E-40 1.5E-44 370.0 24.0 215 1003-1234 4-234 (280)
224 PRK13648 cbiO cobalt transport 100.0 4.9E-40 1.1E-44 369.6 22.5 219 1003-1234 7-232 (269)
225 PRK11124 artP arginine transpo 100.0 7E-40 1.5E-44 363.3 23.4 216 1004-1234 3-231 (242)
226 PRK14236 phosphate transporter 100.0 1.2E-39 2.6E-44 366.8 25.5 221 1001-1236 23-259 (272)
227 PRK14243 phosphate transporter 100.0 1.3E-39 2.8E-44 364.9 25.5 219 1003-1236 10-251 (264)
228 PRK14266 phosphate ABC transpo 100.0 9.4E-40 2E-44 364.2 24.3 227 1003-1240 3-241 (250)
229 PRK11022 dppD dipeptide transp 100.0 8.9E-40 1.9E-44 374.7 24.6 227 1003-1243 3-253 (326)
230 PRK14260 phosphate ABC transpo 100.0 9.2E-40 2E-44 365.5 23.9 225 1002-1237 6-247 (259)
231 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.1E-40 9E-45 359.6 20.5 203 1004-1228 1-218 (220)
232 PRK09493 glnQ glutamine ABC tr 100.0 9.9E-40 2.1E-44 361.6 23.7 217 1004-1235 2-227 (240)
233 PRK11231 fecE iron-dicitrate t 100.0 6.9E-40 1.5E-44 365.9 22.5 211 1004-1233 3-227 (255)
234 PRK14254 phosphate ABC transpo 100.0 1.8E-39 4E-44 366.5 26.1 220 1002-1236 38-272 (285)
235 cd03290 ABCC_SUR1_N The SUR do 100.0 9.6E-40 2.1E-44 356.2 23.0 210 1005-1221 2-218 (218)
236 cd03301 ABC_MalK_N The N-termi 100.0 4.5E-40 9.8E-45 357.8 20.4 206 1004-1226 1-213 (213)
237 cd03225 ABC_cobalt_CbiO_domain 100.0 4.2E-40 9E-45 357.5 20.1 204 1005-1221 1-211 (211)
238 TIGR03410 urea_trans_UrtE urea 100.0 6.2E-40 1.3E-44 361.0 21.6 212 1004-1232 1-220 (230)
239 PRK13649 cbiO cobalt transport 100.0 1.5E-39 3.3E-44 368.1 25.2 219 1004-1234 3-235 (280)
240 PRK14252 phosphate ABC transpo 100.0 1.4E-39 3.1E-44 365.2 24.7 222 999-1235 12-251 (265)
241 PRK14270 phosphate ABC transpo 100.0 1.7E-39 3.6E-44 362.2 24.9 222 1003-1235 4-237 (251)
242 PRK14261 phosphate ABC transpo 100.0 1.4E-39 3E-44 363.2 24.3 224 1003-1241 6-245 (253)
243 PRK11614 livF leucine/isoleuci 100.0 1.3E-39 2.9E-44 359.9 23.8 218 1003-1234 5-227 (237)
244 TIGR02673 FtsE cell division A 100.0 4.7E-40 1E-44 357.9 19.8 200 1004-1221 2-214 (214)
245 cd03292 ABC_FtsE_transporter F 100.0 6E-40 1.3E-44 357.2 20.5 201 1004-1222 1-214 (214)
246 PRK14271 phosphate ABC transpo 100.0 2.5E-39 5.4E-44 364.0 26.1 223 1003-1236 21-254 (276)
247 PRK13645 cbiO cobalt transport 100.0 1.1E-39 2.3E-44 370.5 23.2 222 1001-1234 4-241 (289)
248 COG0410 LivF ABC-type branched 100.0 1.3E-39 2.9E-44 334.4 21.5 220 1003-1235 3-228 (237)
249 cd03246 ABCC_Protease_Secretio 100.0 1E-39 2.2E-44 341.9 21.2 172 1004-1222 1-173 (173)
250 cd03300 ABC_PotA_N PotA is an 100.0 7.8E-40 1.7E-44 360.1 21.1 212 1004-1236 1-223 (232)
251 TIGR01288 nodI ATP-binding ABC 100.0 1.1E-39 2.3E-44 372.5 23.0 216 1003-1234 4-225 (303)
252 PRK13548 hmuV hemin importer A 100.0 2.3E-39 5.1E-44 361.5 24.9 213 1003-1234 2-231 (258)
253 PRK13641 cbiO cobalt transport 100.0 1.3E-39 2.9E-44 368.7 23.2 220 1003-1234 2-235 (287)
254 PRK11247 ssuB aliphatic sulfon 100.0 1.8E-39 4E-44 360.1 23.7 203 1003-1229 12-219 (257)
255 PRK10253 iron-enterobactin tra 100.0 1.3E-39 2.8E-44 365.4 22.7 213 1002-1233 6-233 (265)
256 TIGR03415 ABC_choXWV_ATP choli 100.0 1.4E-39 3.1E-44 375.6 23.5 210 1018-1240 37-261 (382)
257 PRK13536 nodulation factor exp 100.0 9.8E-40 2.1E-44 375.1 22.0 216 1003-1234 41-262 (340)
258 PRK14263 phosphate ABC transpo 100.0 2.6E-39 5.5E-44 361.2 24.6 222 1003-1239 8-251 (261)
259 PRK10895 lipopolysaccharide AB 100.0 1.7E-39 3.7E-44 360.0 22.9 217 1003-1234 3-227 (241)
260 TIGR03522 GldA_ABC_ATP gliding 100.0 1.4E-39 3.1E-44 370.8 22.9 215 1004-1234 3-222 (301)
261 TIGR00968 3a0106s01 sulfate AB 100.0 2.4E-39 5.2E-44 357.2 23.8 210 1004-1234 1-221 (237)
262 PRK14265 phosphate ABC transpo 100.0 3.9E-39 8.6E-44 362.4 25.9 220 1002-1236 19-261 (274)
263 PRK14258 phosphate ABC transpo 100.0 2.5E-39 5.5E-44 362.2 24.2 225 1002-1237 6-249 (261)
264 PRK14253 phosphate ABC transpo 100.0 2.7E-39 5.9E-44 360.2 24.3 223 1003-1236 3-236 (249)
265 PRK10584 putative ABC transpor 100.0 2.2E-39 4.7E-44 356.2 23.1 206 1003-1225 6-227 (228)
266 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.9E-39 4E-44 352.2 22.1 200 1004-1226 1-211 (211)
267 PRK14241 phosphate transporter 100.0 2.5E-39 5.4E-44 362.1 23.7 222 1003-1235 4-244 (258)
268 PRK14275 phosphate ABC transpo 100.0 2.8E-39 6E-44 365.6 24.2 227 1002-1239 38-276 (286)
269 PRK13638 cbiO cobalt transport 100.0 1.8E-39 3.9E-44 365.4 22.3 216 1004-1234 2-226 (271)
270 PRK15093 antimicrobial peptide 100.0 3E-39 6.5E-44 371.8 24.4 226 1003-1242 3-257 (330)
271 PRK13639 cbiO cobalt transport 100.0 1.8E-39 3.9E-44 365.7 22.1 217 1004-1234 2-227 (275)
272 cd03235 ABC_Metallic_Cations A 100.0 9.9E-40 2.1E-44 354.9 19.3 197 1005-1226 1-213 (213)
273 PRK14246 phosphate ABC transpo 100.0 2.7E-39 5.9E-44 360.1 23.3 229 1003-1242 10-250 (257)
274 COG1118 CysA ABC-type sulfate/ 100.0 7.1E-40 1.5E-44 346.6 17.5 221 1003-1240 2-234 (345)
275 cd03257 ABC_NikE_OppD_transpor 100.0 1.7E-39 3.7E-44 357.5 21.0 212 1004-1226 2-228 (228)
276 PRK10771 thiQ thiamine transpo 100.0 5.3E-39 1.1E-43 353.7 24.9 208 1004-1234 2-220 (232)
277 PRK14264 phosphate ABC transpo 100.0 5.1E-39 1.1E-43 366.5 25.6 220 1001-1235 43-291 (305)
278 PRK15112 antimicrobial peptide 100.0 3E-39 6.5E-44 362.6 23.3 226 1003-1245 4-252 (267)
279 TIGR03873 F420-0_ABC_ATP propo 100.0 2.6E-39 5.5E-44 361.5 22.6 211 1004-1233 2-226 (256)
280 PRK14272 phosphate ABC transpo 100.0 2.8E-39 6.2E-44 360.9 22.8 227 1003-1240 4-243 (252)
281 PRK10247 putative ABC transpor 100.0 1.9E-39 4.2E-44 355.0 20.9 209 1003-1229 7-223 (225)
282 cd03269 ABC_putative_ATPase Th 100.0 1.6E-39 3.5E-44 352.4 20.1 200 1004-1226 1-210 (210)
283 PRK11701 phnK phosphonate C-P 100.0 8.6E-39 1.9E-43 357.7 26.5 225 1003-1242 6-250 (258)
284 PRK10908 cell division protein 100.0 4.8E-39 1E-43 351.7 23.8 207 1004-1224 2-217 (222)
285 PRK11300 livG leucine/isoleuci 100.0 4.7E-39 1E-43 359.9 23.8 226 1003-1234 5-244 (255)
286 PRK14255 phosphate ABC transpo 100.0 5.1E-39 1.1E-43 358.7 23.7 222 1003-1239 5-242 (252)
287 KOG0065 Pleiotropic drug resis 100.0 4.3E-38 9.3E-43 388.3 33.4 203 1016-1230 802-1018(1391)
288 cd03299 ABC_ModC_like Archeal 100.0 5.4E-39 1.2E-43 353.9 22.9 210 1004-1235 1-221 (235)
289 COG1131 CcmA ABC-type multidru 100.0 2.8E-39 6E-44 364.0 20.7 213 1003-1234 4-227 (293)
290 TIGR01188 drrA daunorubicin re 100.0 3.2E-39 6.9E-44 368.4 21.1 199 1018-1234 6-214 (302)
291 COG4555 NatA ABC-type Na+ tran 100.0 1.1E-39 2.4E-44 323.8 14.7 216 1004-1234 2-223 (245)
292 cd03262 ABC_HisP_GlnQ_permease 100.0 3.2E-39 7E-44 351.2 19.9 204 1004-1222 1-213 (213)
293 TIGR01277 thiQ thiamine ABC tr 100.0 6.1E-39 1.3E-43 348.4 22.0 201 1004-1227 1-212 (213)
294 PRK10418 nikD nickel transport 100.0 9.8E-39 2.1E-43 356.2 24.1 224 1003-1245 4-243 (254)
295 PRK00349 uvrA excinuclease ABC 100.0 3.2E-38 7E-43 397.6 31.4 232 1003-1244 614-938 (943)
296 PRK09984 phosphonate/organopho 100.0 1E-38 2.3E-43 357.9 24.1 223 1003-1247 4-253 (262)
297 PRK13547 hmuV hemin importer A 100.0 9.8E-39 2.1E-43 357.4 23.5 211 1004-1233 2-244 (272)
298 PRK11144 modC molybdate transp 100.0 1E-38 2.2E-43 370.3 23.5 212 1004-1237 2-222 (352)
299 TIGR01978 sufC FeS assembly AT 100.0 7.6E-39 1.6E-43 355.8 21.4 216 1004-1232 1-233 (243)
300 COG1137 YhbG ABC-type (unclass 100.0 7.4E-40 1.6E-44 324.6 11.8 224 1002-1235 3-230 (243)
301 PRK11248 tauB taurine transpor 100.0 1.9E-38 4E-43 353.0 22.5 201 1004-1228 2-215 (255)
302 TIGR02982 heterocyst_DevA ABC 100.0 1.5E-38 3.3E-43 347.0 20.3 206 1004-1222 2-219 (220)
303 PRK10419 nikE nickel transport 100.0 6.2E-38 1.3E-42 351.8 25.7 228 1003-1244 3-251 (268)
304 TIGR03740 galliderm_ABC gallid 100.0 3.4E-38 7.4E-43 345.3 22.5 204 1004-1230 1-210 (223)
305 cd03228 ABCC_MRP_Like The MRP 100.0 3.1E-38 6.8E-43 329.9 20.7 171 1004-1221 1-171 (171)
306 cd03234 ABCG_White The White s 100.0 2E-38 4.3E-43 347.7 19.9 212 1004-1226 4-226 (226)
307 TIGR02142 modC_ABC molybdenum 100.0 2.8E-38 6.1E-43 367.3 22.2 212 1008-1240 4-228 (354)
308 COG0444 DppD ABC-type dipeptid 100.0 3E-38 6.6E-43 342.0 20.1 232 1004-1245 2-255 (316)
309 TIGR02323 CP_lyasePhnK phospho 100.0 1.6E-37 3.5E-42 346.8 26.2 224 1003-1241 3-246 (253)
310 PRK09544 znuC high-affinity zi 100.0 9.8E-38 2.1E-42 345.8 24.2 208 1003-1243 4-217 (251)
311 cd03229 ABC_Class3 This class 100.0 5.8E-38 1.3E-42 330.2 20.9 172 1004-1221 1-178 (178)
312 cd03230 ABC_DR_subfamily_A Thi 100.0 5.4E-38 1.2E-42 328.8 20.5 170 1004-1222 1-173 (173)
313 COG4619 ABC-type uncharacteriz 100.0 1.8E-38 4E-43 304.9 14.8 199 1012-1225 10-215 (223)
314 cd03233 ABC_PDR_domain1 The pl 100.0 8.2E-38 1.8E-42 335.7 20.9 190 1003-1226 3-202 (202)
315 PRK15056 manganese/iron transp 100.0 1.1E-37 2.4E-42 350.8 22.9 209 1003-1233 6-230 (272)
316 cd03217 ABC_FeS_Assembly ABC-t 100.0 1.2E-37 2.6E-42 334.1 22.0 185 1004-1232 1-192 (200)
317 cd03213 ABCG_EPDR ABCG transpo 100.0 1.6E-37 3.4E-42 331.2 22.0 182 1003-1226 3-194 (194)
318 cd03297 ABC_ModC_molybdenum_tr 100.0 9.6E-38 2.1E-42 339.4 20.4 199 1005-1226 3-214 (214)
319 cd03232 ABC_PDR_domain2 The pl 100.0 2.4E-37 5.3E-42 329.4 21.4 181 1003-1226 3-192 (192)
320 COG4175 ProV ABC-type proline/ 100.0 1.7E-37 3.6E-42 328.1 19.6 224 1003-1239 4-260 (386)
321 cd03215 ABC_Carb_Monos_II This 100.0 1.4E-37 3E-42 328.5 19.1 172 1003-1222 4-182 (182)
322 cd03214 ABC_Iron-Siderophores_ 100.0 1.8E-37 3.8E-42 327.2 19.7 177 1005-1226 1-180 (180)
323 COG0411 LivG ABC-type branched 100.0 6E-38 1.3E-42 324.8 15.6 217 1004-1235 5-241 (250)
324 cd03223 ABCD_peroxisomal_ALDP 100.0 2.6E-37 5.6E-42 320.7 20.3 164 1004-1221 1-164 (166)
325 CHL00131 ycf16 sulfate ABC tra 100.0 3.4E-37 7.4E-42 344.2 22.2 215 1003-1231 7-239 (252)
326 TIGR03608 L_ocin_972_ABC putat 100.0 1.6E-37 3.5E-42 336.0 18.2 193 1006-1217 1-206 (206)
327 PRK03695 vitamin B12-transport 100.0 4.7E-37 1E-41 340.8 21.6 209 1005-1233 2-222 (248)
328 COG1123 ATPase components of v 100.0 3.5E-37 7.6E-42 358.0 21.3 231 1003-1244 5-255 (539)
329 TIGR00630 uvra excinuclease AB 100.0 2.3E-36 4.9E-41 380.3 30.0 221 1003-1231 612-923 (924)
330 TIGR02770 nickel_nikD nickel i 100.0 3.4E-37 7.3E-42 338.7 19.8 206 1020-1241 1-223 (230)
331 PRK14257 phosphate ABC transpo 100.0 3.4E-37 7.3E-42 353.0 18.8 222 377-610 23-313 (329)
332 PRK09580 sufC cysteine desulfu 100.0 1.4E-36 3.1E-41 338.5 23.2 215 1004-1231 2-233 (248)
333 PRK00635 excinuclease ABC subu 100.0 1.6E-35 3.4E-40 386.3 35.7 100 1135-1234 797-907 (1809)
334 cd03231 ABC_CcmA_heme_exporter 100.0 1.3E-36 2.9E-41 326.5 21.3 194 1004-1217 1-198 (201)
335 TIGR01184 ntrCD nitrate transp 100.0 7.3E-37 1.6E-41 335.6 19.5 194 1021-1232 1-203 (230)
336 cd03216 ABC_Carb_Monos_I This 100.0 2.2E-36 4.7E-41 312.8 21.7 159 1004-1224 1-162 (163)
337 cd03267 ABC_NatA_like Similar 100.0 8.3E-37 1.8E-41 336.5 19.6 196 1017-1226 33-236 (236)
338 COG4608 AppF ABC-type oligopep 100.0 8.8E-37 1.9E-41 323.9 18.5 197 1003-1245 4-211 (268)
339 PRK15439 autoinducer 2 ABC tra 100.0 2.3E-36 4.9E-41 370.2 24.6 212 1003-1233 11-229 (510)
340 PRK13538 cytochrome c biogenes 100.0 1.8E-36 3.8E-41 326.5 20.5 194 1004-1217 2-202 (204)
341 KOG0060 Long-chain acyl-CoA tr 100.0 5.5E-34 1.2E-38 323.4 41.1 476 726-1219 125-641 (659)
342 PRK13549 xylose transporter AT 100.0 1.7E-36 3.7E-41 371.7 22.2 216 1003-1233 5-232 (506)
343 COG4598 HisP ABC-type histidin 100.0 5E-37 1.1E-41 297.8 13.5 220 1003-1237 6-245 (256)
344 PRK09700 D-allose transporter 100.0 1.7E-36 3.7E-41 372.4 21.3 216 1003-1233 5-234 (510)
345 TIGR01257 rim_protein retinal- 100.0 1.1E-34 2.4E-39 384.5 39.6 220 1002-1235 927-1151(2272)
346 PRK10762 D-ribose transporter 100.0 2.5E-36 5.4E-41 369.8 22.3 216 1003-1233 4-230 (501)
347 COG4559 ABC-type hemin transpo 100.0 4E-36 8.7E-41 300.8 18.7 213 1004-1234 2-231 (259)
348 PRK10261 glutathione transport 100.0 3.3E-36 7.2E-41 375.8 21.6 227 1003-1239 12-264 (623)
349 PRK13543 cytochrome c biogenes 100.0 6.5E-36 1.4E-40 324.5 21.0 195 1003-1219 11-212 (214)
350 PRK13540 cytochrome c biogenes 100.0 5.2E-36 1.1E-40 321.8 19.9 193 1004-1216 2-198 (200)
351 COG1245 Predicted ATPase, RNas 100.0 2.3E-35 5.1E-40 324.5 25.0 163 1027-1219 363-531 (591)
352 PRK10938 putative molybdenum t 100.0 6.6E-36 1.4E-40 365.7 22.8 212 1003-1234 3-225 (490)
353 COG4181 Predicted ABC-type tra 100.0 2.3E-36 5.1E-41 291.4 14.2 209 1003-1225 6-227 (228)
354 KOG0066 eIF2-interacting prote 100.0 1.7E-36 3.6E-41 329.0 14.0 192 1003-1224 586-781 (807)
355 COG1126 GlnQ ABC-type polar am 100.0 6.4E-36 1.4E-40 302.3 17.1 164 444-611 2-226 (240)
356 PRK15134 microcin C ABC transp 100.0 1.4E-35 3.1E-40 365.5 24.1 224 1003-1236 5-249 (529)
357 PRK13539 cytochrome c biogenes 100.0 1.6E-35 3.5E-40 319.6 21.4 193 1004-1219 3-200 (207)
358 PRK11288 araG L-arabinose tran 100.0 2.1E-35 4.5E-40 361.7 24.7 211 1003-1228 4-224 (501)
359 PRK10982 galactose/methyl gala 100.0 1.7E-35 3.7E-40 361.9 23.6 212 1006-1232 1-222 (491)
360 TIGR01189 ccmA heme ABC export 100.0 1.2E-35 2.6E-40 318.7 19.2 192 1004-1216 1-197 (198)
361 TIGR02324 CP_lyasePhnL phospho 100.0 1.8E-35 3.8E-40 324.2 19.5 198 1004-1217 2-222 (224)
362 TIGR02633 xylG D-xylose ABC tr 100.0 2E-35 4.4E-40 362.3 22.0 215 1004-1232 2-229 (500)
363 PRK13546 teichoic acids export 100.0 4.6E-35 9.9E-40 326.0 22.7 216 1003-1244 4-243 (264)
364 PLN03211 ABC transporter G-25; 100.0 3.9E-35 8.4E-40 364.7 24.5 203 1018-1233 81-296 (659)
365 PRK13545 tagH teichoic acids e 100.0 6.5E-35 1.4E-39 340.6 24.5 214 1003-1243 21-241 (549)
366 COG4615 PvdE ABC-type sideroph 100.0 3.9E-32 8.4E-37 293.8 43.4 469 118-602 4-529 (546)
367 PRK10535 macrolide transporter 100.0 5.1E-35 1.1E-39 366.3 24.3 217 1003-1232 4-231 (648)
368 TIGR03771 anch_rpt_ABC anchore 100.0 2E-35 4.3E-40 322.6 17.4 186 1026-1234 1-202 (223)
369 TIGR01166 cbiO cobalt transpor 100.0 2.8E-35 6.1E-40 313.8 16.7 177 1018-1207 5-189 (190)
370 TIGR03269 met_CoM_red_A2 methy 100.0 3.8E-35 8.3E-40 361.3 20.4 216 1004-1234 1-259 (520)
371 PRK13541 cytochrome c biogenes 100.0 6.3E-35 1.4E-39 312.1 19.0 188 1004-1215 2-193 (195)
372 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 7.1E-35 1.5E-39 318.3 19.1 197 1004-1226 23-224 (224)
373 COG1129 MglA ABC-type sugar tr 100.0 1.5E-34 3.2E-39 334.1 22.1 211 1003-1228 8-229 (500)
374 COG4161 ArtP ABC-type arginine 100.0 1.5E-34 3.3E-39 275.4 15.2 226 1003-1243 2-240 (242)
375 TIGR00955 3a01204 The Eye Pigm 100.0 1.1E-34 2.4E-39 361.8 17.6 205 1017-1233 37-256 (617)
376 PRK15064 ABC transporter ATP-b 100.0 4.3E-34 9.2E-39 352.5 22.2 214 1004-1234 2-243 (530)
377 COG1125 OpuBA ABC-type proline 100.0 8.4E-35 1.8E-39 299.3 13.1 164 445-612 2-227 (309)
378 TIGR01187 potA spermidine/putr 100.0 2.8E-34 6E-39 329.9 18.2 189 1036-1239 1-196 (325)
379 cd03221 ABCF_EF-3 ABCF_EF-3 E 100.0 1.4E-33 3.1E-38 284.9 19.2 143 1004-1221 1-144 (144)
380 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.7E-33 3.7E-38 348.1 23.1 209 1003-1234 4-249 (552)
381 cd03237 ABC_RNaseL_inhibitor_d 100.0 9.9E-34 2.2E-38 312.2 18.4 192 1011-1232 1-206 (246)
382 PRK11819 putative ABC transpor 100.0 2E-33 4.3E-38 347.5 23.1 215 1003-1234 6-251 (556)
383 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.3E-33 2.8E-38 315.1 19.1 175 444-621 2-236 (275)
384 PRK00635 excinuclease ABC subu 100.0 2.4E-32 5.2E-37 356.7 33.3 93 1142-1234 1383-1484(1809)
385 COG4604 CeuD ABC-type enteroch 100.0 5.5E-34 1.2E-38 281.7 13.3 221 1004-1244 2-234 (252)
386 COG4525 TauB ABC-type taurine 100.0 1E-33 2.2E-38 279.1 14.6 208 1004-1229 4-220 (259)
387 cd03236 ABC_RNaseL_inhibitor_d 100.0 6.5E-34 1.4E-38 314.7 14.8 202 1007-1230 4-227 (255)
388 COG3845 ABC-type uncharacteriz 100.0 3.6E-33 7.7E-38 314.5 20.2 216 1003-1227 4-223 (501)
389 COG1116 TauB ABC-type nitrate/ 100.0 1.8E-33 4E-38 294.6 16.2 154 444-600 3-212 (248)
390 PRK15177 Vi polysaccharide exp 100.0 3.1E-33 6.7E-38 302.4 18.5 185 1020-1233 2-192 (213)
391 COG1120 FepC ABC-type cobalami 100.0 1.7E-33 3.7E-38 301.8 16.2 163 444-610 2-228 (258)
392 COG4167 SapF ABC-type antimicr 100.0 2.2E-33 4.8E-38 273.1 15.5 213 1018-1246 26-253 (267)
393 COG1135 AbcC ABC-type metal io 100.0 1.6E-33 3.6E-38 299.4 14.6 166 445-611 2-232 (339)
394 COG1124 DppF ABC-type dipeptid 100.0 2.4E-33 5.3E-38 290.2 13.6 167 444-611 3-232 (252)
395 COG1127 Ttg2A ABC-type transpo 100.0 6.7E-33 1.4E-37 284.9 16.0 168 442-613 6-238 (263)
396 COG1101 PhnK ABC-type uncharac 100.0 3.2E-33 7E-38 280.6 13.0 204 1015-1226 16-231 (263)
397 COG4148 ModC ABC-type molybdat 100.0 1.2E-32 2.6E-37 286.3 16.5 208 1009-1235 4-220 (352)
398 COG1117 PstB ABC-type phosphat 100.0 2.6E-33 5.7E-38 281.5 10.8 165 442-610 5-237 (253)
399 COG4172 ABC-type uncharacteriz 100.0 2.5E-32 5.5E-37 296.6 19.0 230 1003-1246 6-260 (534)
400 COG0178 UvrA Excinuclease ATPa 100.0 1.2E-30 2.6E-35 306.6 34.1 107 1139-1245 815-931 (935)
401 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.8E-32 4E-37 292.0 17.1 163 443-610 3-227 (254)
402 cd00267 ABC_ATPase ABC (ATP-bi 100.0 7.6E-32 1.6E-36 278.0 19.7 155 1005-1221 1-157 (157)
403 cd03222 ABC_RNaseL_inhibitor T 100.0 3.9E-32 8.4E-37 281.7 17.3 154 1007-1232 4-162 (177)
404 COG4674 Uncharacterized ABC-ty 100.0 4E-32 8.6E-37 268.2 14.5 220 1003-1236 5-238 (249)
405 COG1136 SalX ABC-type antimicr 100.0 4.6E-32 9.9E-37 285.0 15.6 155 445-600 2-221 (226)
406 COG1119 ModF ABC-type molybden 100.0 2.6E-31 5.7E-36 275.2 20.8 210 1002-1227 30-256 (257)
407 cd03238 ABC_UvrA The excision 100.0 1E-31 2.2E-36 278.2 17.3 160 1018-1226 8-176 (176)
408 COG3842 PotA ABC-type spermidi 100.0 4.2E-32 9.1E-37 304.0 14.6 167 443-612 4-228 (352)
409 PRK10636 putative ABC transpor 100.0 2.3E-31 5E-36 332.3 22.9 210 1004-1233 2-236 (638)
410 COG3638 ABC-type phosphate/pho 100.0 3.6E-32 7.7E-37 278.8 12.4 164 444-609 3-236 (258)
411 COG4152 ABC-type uncharacteriz 100.0 8.5E-32 1.8E-36 275.3 13.3 210 1003-1233 2-219 (300)
412 cd03252 ABCC_Hemolysin The ABC 100.0 3E-31 6.5E-36 293.4 18.5 172 445-618 1-233 (237)
413 COG3840 ThiQ ABC-type thiamine 100.0 7.2E-32 1.6E-36 263.5 11.8 161 445-611 2-220 (231)
414 COG3839 MalK ABC-type sugar tr 100.0 3E-31 6.4E-36 295.6 15.8 164 444-611 3-224 (338)
415 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.8E-30 3.8E-35 291.0 21.8 171 441-616 36-253 (282)
416 COG1118 CysA ABC-type sulfate/ 100.0 3.5E-31 7.6E-36 280.7 13.7 163 445-611 3-228 (345)
417 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.3E-30 2.8E-35 288.6 18.7 167 445-612 1-228 (238)
418 PRK11147 ABC transporter ATPas 100.0 2.6E-30 5.6E-35 324.0 23.8 213 1003-1234 3-244 (635)
419 cd03254 ABCC_Glucan_exporter_l 100.0 1.2E-30 2.5E-35 287.3 18.2 164 444-610 2-226 (229)
420 TIGR02314 ABC_MetN D-methionin 100.0 8.2E-31 1.8E-35 300.4 17.4 166 445-611 2-231 (343)
421 cd03288 ABCC_SUR2 The SUR doma 100.0 2.2E-30 4.8E-35 289.3 20.2 169 441-611 16-244 (257)
422 COG0396 sufC Cysteine desulfur 100.0 4.3E-30 9.3E-35 262.5 19.6 214 1003-1233 3-233 (251)
423 cd03251 ABCC_MsbA MsbA is an e 100.0 2E-30 4.4E-35 286.4 18.0 166 445-612 1-227 (234)
424 COG2884 FtsE Predicted ATPase 100.0 9.7E-31 2.1E-35 258.3 13.6 156 445-603 2-219 (223)
425 COG0488 Uup ATPase components 100.0 3.4E-30 7.3E-35 307.3 20.6 213 1003-1234 3-241 (530)
426 COG1122 CbiO ABC-type cobalt t 100.0 1.1E-30 2.4E-35 281.2 14.6 164 444-610 3-228 (235)
427 cd03253 ABCC_ATM1_transporter 100.0 3.3E-30 7.2E-35 285.0 18.6 168 445-615 1-229 (236)
428 cd03244 ABCC_MRP_domain2 Domai 100.0 4.1E-30 8.8E-35 281.3 17.7 159 444-604 2-220 (221)
429 TIGR00956 3a01205 Pleiotropic 100.0 2.6E-30 5.6E-35 345.6 18.2 205 1019-1232 75-299 (1394)
430 PRK13631 cbiO cobalt transport 100.0 1.2E-29 2.5E-34 290.1 20.5 170 441-611 18-266 (320)
431 PRK13409 putative ATPase RIL; 100.0 1.2E-30 2.6E-35 320.6 13.2 192 1008-1220 78-287 (590)
432 cd03216 ABC_Carb_Monos_I This 100.0 4.8E-30 1E-34 265.4 15.4 152 445-601 1-162 (163)
433 cd03247 ABCC_cytochrome_bd The 100.0 8E-30 1.7E-34 268.5 17.1 157 445-603 1-178 (178)
434 cd03250 ABCC_MRP_domain1 Domai 100.0 6E-30 1.3E-34 276.1 16.1 154 445-598 1-204 (204)
435 PRK11650 ugpC glycerol-3-phosp 100.0 9.2E-30 2E-34 294.5 18.5 165 444-611 3-225 (356)
436 COG4178 ABC-type uncharacteriz 100.0 3.1E-26 6.6E-31 270.3 47.7 401 188-595 106-587 (604)
437 KOG0064 Peroxisomal long-chain 100.0 3.7E-26 8E-31 255.5 45.3 469 726-1217 160-681 (728)
438 COG1134 TagH ABC-type polysacc 100.0 3.2E-29 6.9E-34 260.5 19.4 193 1018-1234 40-237 (249)
439 COG4136 ABC-type uncharacteriz 100.0 1.8E-29 3.8E-34 238.2 15.8 192 1003-1215 2-205 (213)
440 cd03245 ABCC_bacteriocin_expor 100.0 1.5E-29 3.3E-34 276.5 17.5 158 444-603 2-220 (220)
441 PRK11432 fbpC ferric transport 100.0 1.7E-29 3.8E-34 291.3 18.8 164 443-610 5-226 (351)
442 cd03261 ABC_Org_Solvent_Resist 100.0 9.3E-30 2E-34 281.0 15.7 162 445-610 1-226 (235)
443 PRK13650 cbiO cobalt transport 100.0 1.8E-29 3.8E-34 284.9 18.0 167 444-611 4-230 (279)
444 PRK13637 cbiO cobalt transport 100.0 2.3E-29 5.1E-34 284.9 18.6 166 444-610 2-234 (287)
445 PLN03140 ABC transporter G fam 100.0 6.1E-30 1.3E-34 340.0 15.7 212 1018-1232 178-426 (1470)
446 TIGR01186 proV glycine betaine 100.0 1.3E-29 2.8E-34 292.0 16.3 152 460-611 6-220 (363)
447 PRK13643 cbiO cobalt transport 100.0 2.6E-29 5.6E-34 284.6 18.1 165 445-610 2-233 (288)
448 PRK13537 nodulation ABC transp 100.0 2.2E-29 4.8E-34 286.9 17.6 164 443-610 6-227 (306)
449 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.3E-29 5E-34 277.8 16.9 162 445-610 2-221 (236)
450 TIGR03265 PhnT2 putative 2-ami 100.0 2.3E-29 5E-34 290.9 17.5 164 444-611 4-225 (353)
451 PRK11153 metN DL-methionine tr 100.0 1.9E-29 4.1E-34 291.9 16.7 166 445-611 2-231 (343)
452 cd03248 ABCC_TAP TAP, the Tran 100.0 2.7E-29 5.8E-34 275.7 16.6 158 441-599 8-226 (226)
453 TIGR03258 PhnT 2-aminoethylpho 100.0 3.6E-29 7.8E-34 289.5 18.4 165 443-611 4-229 (362)
454 PRK09452 potA putrescine/sperm 100.0 4.2E-29 9.1E-34 289.8 18.8 166 442-611 12-235 (375)
455 cd03246 ABCC_Protease_Secretio 100.0 2.9E-29 6.3E-34 262.8 15.7 151 445-599 1-173 (173)
456 PLN03073 ABC transporter F fam 100.0 4.7E-29 1E-33 311.7 20.3 226 1002-1233 176-431 (718)
457 cd03369 ABCC_NFT1 Domain 2 of 100.0 6.3E-29 1.4E-33 268.7 18.4 161 442-604 4-206 (207)
458 cd03214 ABC_Iron-Siderophores_ 100.0 3.9E-29 8.6E-34 263.6 16.3 154 446-603 1-180 (180)
459 PF00005 ABC_tran: ABC transpo 100.0 9.5E-30 2.1E-34 256.4 11.0 136 1021-1175 1-137 (137)
460 PRK09473 oppD oligopeptide tra 100.0 3.8E-29 8.2E-34 287.1 16.9 169 442-611 10-252 (330)
461 PRK11022 dppD dipeptide transp 100.0 3.4E-29 7.4E-34 287.3 16.5 167 444-611 3-244 (326)
462 PRK13646 cbiO cobalt transport 100.0 6.3E-29 1.4E-33 281.5 18.5 167 444-611 2-236 (286)
463 cd03259 ABC_Carb_Solutes_like 100.0 2.5E-29 5.5E-34 273.3 14.6 155 445-603 1-213 (213)
464 PRK13536 nodulation factor exp 100.0 5E-29 1.1E-33 286.6 17.7 165 442-610 39-261 (340)
465 TIGR01288 nodI ATP-binding ABC 100.0 4.8E-29 1E-33 284.9 17.5 164 443-610 3-224 (303)
466 cd03263 ABC_subfamily_A The AB 100.0 3.5E-29 7.6E-34 273.7 15.6 162 445-608 1-219 (220)
467 cd03258 ABC_MetN_methionine_tr 100.0 4.3E-29 9.2E-34 275.5 16.2 164 445-609 2-229 (233)
468 cd03265 ABC_DrrA DrrA is the A 100.0 3.4E-29 7.3E-34 273.6 15.1 160 445-608 1-219 (220)
469 cd03266 ABC_NatA_sodium_export 100.0 3.9E-29 8.5E-34 272.9 15.3 158 445-603 2-218 (218)
470 cd03219 ABC_Mj1267_LivG_branch 100.0 3.9E-29 8.5E-34 276.4 15.4 161 445-609 1-231 (236)
471 cd03296 ABC_CysA_sulfate_impor 100.0 4.5E-29 9.8E-34 276.1 15.8 162 445-610 3-226 (239)
472 PRK13634 cbiO cobalt transport 100.0 7.8E-29 1.7E-33 281.0 17.9 166 445-611 3-236 (290)
473 PRK13644 cbiO cobalt transport 100.0 7.5E-29 1.6E-33 279.1 17.6 163 445-610 2-224 (274)
474 COG4107 PhnK ABC-type phosphon 100.0 1.5E-28 3.2E-33 237.5 17.0 236 1003-1245 6-253 (258)
475 TIGR03410 urea_trans_UrtE urea 100.0 2.8E-29 6.1E-34 276.3 13.8 160 445-608 1-219 (230)
476 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.8E-29 1E-33 276.5 15.4 163 445-610 1-225 (242)
477 PRK11308 dppF dipeptide transp 100.0 6.9E-29 1.5E-33 284.6 17.0 168 443-611 4-245 (327)
478 cd03224 ABC_TM1139_LivF_branch 100.0 3.4E-29 7.4E-34 274.3 13.7 161 445-609 1-220 (222)
479 PRK11000 maltose/maltodextrin 100.0 8.9E-29 1.9E-33 288.4 18.1 163 444-610 3-223 (369)
480 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.9E-29 8.4E-34 273.0 14.1 154 445-599 1-218 (218)
481 cd03218 ABC_YhbG The ABC trans 100.0 5.6E-29 1.2E-33 274.5 15.5 161 445-609 1-221 (232)
482 TIGR02315 ABC_phnC phosphonate 100.0 1.1E-28 2.4E-33 274.2 17.9 161 445-608 2-233 (243)
483 TIGR00972 3a0107s01c2 phosphat 100.0 8.3E-29 1.8E-33 275.4 16.8 162 445-610 2-232 (247)
484 cd03223 ABCD_peroxisomal_ALDP 100.0 8.3E-29 1.8E-33 257.0 15.7 148 445-597 1-163 (166)
485 PRK13648 cbiO cobalt transport 100.0 1.7E-28 3.7E-33 276.0 19.6 166 444-611 7-232 (269)
486 PRK10851 sulfate/thiosulfate t 100.0 7.5E-29 1.6E-33 286.6 17.0 162 445-610 3-226 (353)
487 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.7E-29 1.2E-33 271.8 15.1 160 445-605 1-218 (220)
488 cd03256 ABC_PhnC_transporter A 100.0 1.2E-28 2.6E-33 273.6 17.7 162 445-609 1-233 (241)
489 COG0410 LivF ABC-type branched 100.0 1.3E-28 2.9E-33 253.4 16.6 165 444-612 3-228 (237)
490 cd03301 ABC_MalK_N The N-termi 100.0 5.6E-29 1.2E-33 270.7 14.7 155 445-603 1-213 (213)
491 TIGR00960 3a0501s02 Type II (G 100.0 5.9E-29 1.3E-33 271.0 14.9 153 445-599 2-216 (216)
492 TIGR02769 nickel_nikE nickel i 100.0 9.2E-29 2E-33 277.5 16.9 166 444-611 2-241 (265)
493 PRK13647 cbiO cobalt transport 100.0 1E-28 2.3E-33 277.9 17.2 162 444-608 4-225 (274)
494 PRK13635 cbiO cobalt transport 100.0 1.8E-28 4E-33 276.4 18.8 167 443-611 4-230 (279)
495 PRK14242 phosphate transporter 100.0 1.2E-28 2.6E-33 275.4 17.1 164 443-610 5-237 (253)
496 PRK14250 phosphate ABC transpo 100.0 1.1E-28 2.3E-33 273.1 16.4 163 444-610 3-221 (241)
497 TIGR02211 LolD_lipo_ex lipopro 100.0 9.6E-29 2.1E-33 270.4 15.7 155 445-600 2-220 (221)
498 PRK09536 btuD corrinoid ABC tr 100.0 7.9E-29 1.7E-33 288.9 15.9 164 444-611 3-229 (402)
499 PRK15079 oligopeptide ABC tran 100.0 1.1E-28 2.3E-33 283.1 16.7 169 442-611 6-252 (331)
500 PRK13642 cbiO cobalt transport 100.0 1.5E-28 3.3E-33 277.3 17.6 167 444-611 4-230 (277)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.5e-246 Score=2284.47 Aligned_cols=1196 Identities=42% Similarity=0.700 Sum_probs=1109.9
Q ss_pred CCCCCCCcCCh--hHHHHHHhHHHHHHhhccCCCCCCCCcCCCccCcHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHH
Q 000845 47 DHVTPFDKAGL--LRKITFWWLDPLMKKGKDKVLEDIDVPQLRLADRATTCYSLFIEELNDWNQKRPSAHPSILRALISC 124 (1255)
Q Consensus 47 ~~~~~e~~a~~--~s~~~f~W~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 124 (1255)
..++|.+.++. +|+++|||++|++++|+|++|+.+|+|+++++|+++.+.++|++.|+++.++. .++|+++++++++
T Consensus 120 ~~~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~-~~~psl~~al~~~ 198 (1381)
T KOG0054|consen 120 VDPNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRS-GKKPSLLRALLRT 198 (1381)
T ss_pred cCCCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccc-cCCcHHHHHHHHH
Confidence 34556666666 99999999999999999999999999999999999999999999999987432 2678999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 125 HWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSLC 204 (1255)
Q Consensus 125 ~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~ 204 (1255)
||+.++..++++.+...+.+++|.+++.++.++++++.+.+.||+|++++|++.++.+++.++|+|...+.|+|+|++++
T Consensus 199 f~~~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~ 278 (1381)
T KOG0054|consen 199 FGRTFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALI 278 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHH
Confidence 99999999999999999999999999999999999866678899999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000845 205 AAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWFHQIWSTSLQLCIAVVVVYYSVGLATIATLIVMILTVLGN 284 (1255)
Q Consensus 205 ~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~~~~~~~~~ 284 (1255)
++||+|+|+++..++++.+.|+|+|+|++|++|+.+++.++|.+|.+|+|+++++++||..+|+++++|++++++++|+|
T Consensus 279 ~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n 358 (1381)
T KOG0054|consen 279 SAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLN 358 (1381)
T ss_pred HHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 285 SPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVLFWSSPILI 364 (1255)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~ 364 (1255)
.+++++++++|++.|+.+|+|+++++|+|++||+|||||||+.|.++|+++|++|++.+|+..++.+++.++++++|+++
T Consensus 359 ~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv 438 (1381)
T KOG0054|consen 359 SFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLV 438 (1381)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-HhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhcccccccCcc
Q 000845 365 GAATLLTCY-FLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRAELEH 443 (1255)
Q Consensus 365 ~~~~f~~~~-~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~ 443 (1255)
++++|++|+ ..++.+||+.+|+++++|++|+.|+..+|..++.+.++.||++|+++||..||.+.....+.+.. +.+.
T Consensus 439 ~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~-~~~~ 517 (1381)
T KOG0054|consen 439 SVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDE-AGEN 517 (1381)
T ss_pred HHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCC-CCCc
Confidence 999999999 67889999999999999999999999999999999999999999999999999877655432222 2566
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC---------------------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG--------------------- 502 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G--------------------- 502 (1255)
.|+++|++|+|+.+.+.|.|+||||+|++|+++||||++||||||||++|+||+++.+|
T Consensus 518 ~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~Q~pWI~ngT 597 (1381)
T KOG0054|consen 518 AIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGT 597 (1381)
T ss_pred eEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEeccccHhhCCc
Confidence 89999999999986566799999999999999999999999999999999999999998
Q ss_pred --------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHH
Q 000845 503 --------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAK 556 (1255)
Q Consensus 503 --------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~ 556 (1255)
+|++.||.||+|+|||||.||||||||||+||||+|+|+||||||||+||||+|
T Consensus 598 vreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDah 677 (1381)
T KOG0054|consen 598 VRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAH 677 (1381)
T ss_pred HHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHh
Confidence 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHHHHHHHHhhhcCCCC-cccccC
Q 000845 557 TAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEFQDLVNAHKETMGPE-TFGEHV 635 (1255)
Q Consensus 557 ~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~~~l~~~~~~~~~~~-~~~~~~ 635 (1255)
|++|||++|+.+++++||+|+|||+++++++||+|++|+||+|.+.|+|+|+++....+.++........... ......
T Consensus 678 vg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 757 (1381)
T KOG0054|consen 678 VGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESEQEEEASEKDLE 757 (1381)
T ss_pred hhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchhhcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999988888887743322111110 000000
Q ss_pred C-Cccch---hhhcc---ccccCCCCCCCcchhhhHHHhhcCCCchhhHHHHHhcccchHHHHHHHHHHHHHHHHHHHHH
Q 000845 636 S-SKEDE---NEVKK---VEDEGHNNTSPADQLIKKEERETGDTGLKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQS 708 (1255)
Q Consensus 636 ~-~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1255)
. ..+.. +.... .+....+......+..++|+++.|.++|++|++|+++.++++.+++.+++.++.+++.++.+
T Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~ 837 (1381)
T KOG0054|consen 758 SGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASN 837 (1381)
T ss_pred ccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000 00000 00011111222455667788899999999999999998888877777888899999999999
Q ss_pred HHHhhhcCCCC------CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchh
Q 000845 709 LWIATYIPSTS------ISRLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRI 782 (1255)
Q Consensus 709 ~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~i 782 (1255)
+|+++|.+... .+..+|+++|.+++++..++..++++.+...+.+++++||++|+++++++|++|||+||+|||
T Consensus 838 ~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRI 917 (1381)
T KOG0054|consen 838 YWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRI 917 (1381)
T ss_pred HHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccch
Confidence 99996665421 356789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000845 783 LSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLA 862 (1255)
Q Consensus 783 l~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~ 862 (1255)
+|||++|++.+|..+|..+..++..++.++++++++++..|+++++++|+.+++++++++|.+++|+++|+++.++||++
T Consensus 918 LNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~ 997 (1381)
T KOG0054|consen 918 LNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIY 997 (1381)
T ss_pred hhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHH
Q 000845 863 SHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALCTTLLHKGHKGAGYTG 942 (1255)
Q Consensus 863 ~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 942 (1255)
+|++|++.|+.|||||+.+++|.+++.+++|.+.+++|.....+||++.|+++++++++.++++++++...+..++|.+|
T Consensus 998 sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vG 1077 (1381)
T KOG0054|consen 998 SHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVG 1077 (1381)
T ss_pred HhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888887765557799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCCCceee
Q 000845 943 MALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLR 1022 (1255)
Q Consensus 943 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~ 1022 (1255)
++++|++++++.++|+++..+++|+.|+|+||+.+|.++|+|++...+...||+.||.+|+|+|+|++++|+|+.|+|||
T Consensus 1078 Lslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~VLk 1157 (1381)
T KOG0054|consen 1078 LSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPNLPLVLK 1157 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCCcchhc
Confidence 99999999999999999999999999999999999999998855555455588999999999999999999999999999
Q ss_pred eeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccC
Q 000845 1023 GITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPL 1102 (1255)
Q Consensus 1023 ~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~ 1102 (1255)
||||+|+||||||||||||||||||+++|+|+.+|.+|+|.|||+||+++++++||+++++|||||+||+||+|+||||+
T Consensus 1158 ~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf 1237 (1381)
T KOG0054|consen 1158 GISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPF 1237 (1381)
T ss_pred CceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHH
Q 000845 1103 SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATD 1182 (1255)
Q Consensus 1103 ~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te 1182 (1255)
++++|+|||+ ||++|+|+++|+++|+|||+.|.|+|.|||.||||++||||||||+++||+||||||++|++||
T Consensus 1238 ~e~sD~~IW~------ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD 1311 (1381)
T KOG0054|consen 1238 DEYSDDEIWE------ALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETD 1311 (1381)
T ss_pred cccCHHHHHH------HHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHH
Confidence 9999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHHHHhh
Q 000845 1183 SILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYWSHA 1250 (1255)
Q Consensus 1183 ~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~~~~ 1250 (1255)
..||++||+.|++||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++.+....+
T Consensus 1312 ~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~~~~ 1379 (1381)
T KOG0054|consen 1312 ALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAALSS 1379 (1381)
T ss_pred HHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999998888876543
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.3e-196 Score=1946.34 Aligned_cols=1194 Identities=33% Similarity=0.585 Sum_probs=1062.1
Q ss_pred CCCCCCCCCCcCChhHHHHHHhHHHHHHhhccCCCCCCCCcCCCccCcHHHHHHHHHHHHHhhhccCCCCChhHHHHHHH
Q 000845 44 DDGDHVTPFDKAGLLRKITFWWLDPLMKKGKDKVLEDIDVPQLRLADRATTCYSLFIEELNDWNQKRPSAHPSILRALIS 123 (1255)
Q Consensus 44 ~~~~~~~~e~~a~~~s~~~f~W~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 123 (1255)
..+++++||+++|+|||++|+|++|++++||+++|+.+|||+++++++++.+.++|++.|+++.+ +++++|++++++
T Consensus 221 ~~~~~~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~---~~~~~l~~~l~~ 297 (1622)
T PLN03130 221 PGGEQICPERHANIFSRIFFGWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEELK---KPKPWLLRALNN 297 (1622)
T ss_pred cccCCCCcccccCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHhc---cCCchHHHHHHH
Confidence 34467899999999999999999999999999999999999999999999999999999987752 345899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 124 CHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSL 203 (1255)
Q Consensus 124 ~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l 203 (1255)
+||+.++.+++++++..++.+++|++++.+++++.+++. .+.+++++++++++.++.+++.++|.+...+++.++|+.+
T Consensus 298 ~~~~~~~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L 376 (1622)
T PLN03130 298 SLGGRFWLGGFFKIGNDLSQFVGPLLLNLLLESMQNGEP-AWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTL 376 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999976432 3567778777777777777888888888999999999999
Q ss_pred HHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000845 204 CAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWFHQIWSTSLQLCIAVVVVYYSVGLATIATLIVMILTVLG 283 (1255)
Q Consensus 204 ~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~~~~~~~~ 283 (1255)
...||+|+++++....++.++|+++|+|++|++++.+.+..+|.+|..|+++++++++||..+|+++++|++++++++|+
T Consensus 377 ~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l 456 (1622)
T PLN03130 377 VAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPI 456 (1622)
T ss_pred HHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 284 NSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVLFWSSPIL 363 (1255)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~ 363 (1255)
+.++++++++.++++++.+|+|++.++|++++||+||+|+||+.|.+++++.|++|++..++..+..++..+++..+|.+
T Consensus 457 ~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~ 536 (1622)
T PLN03130 457 QTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVL 536 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888888887888888
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhcccccccCcc
Q 000845 364 IGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRAELEH 443 (1255)
Q Consensus 364 ~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~ 443 (1255)
+++++|+.|.+.++.+|++.+|+++++|+.+..|+..+|..+..+.++++|++||++||+.+|....... +. .+...
T Consensus 537 v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~--~~-~~~~~ 613 (1622)
T PLN03130 537 VTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPNP--PL-EPGLP 613 (1622)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccCC--cc-cCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999987765322111 00 11234
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCC-C--------------------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQ-G-------------------- 502 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~-G-------------------- 502 (1255)
.|+++|++|+|+.++++++|+|+||++++|++++|+||+|||||||+++|+||+++.+ |
T Consensus 614 ~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~Lfng 693 (1622)
T PLN03130 614 AISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNA 693 (1622)
T ss_pred ceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCC
Confidence 6999999999986555689999999999999999999999999999999999999999 7
Q ss_pred ---------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCH
Q 000845 503 ---------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDA 555 (1255)
Q Consensus 503 ---------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~ 555 (1255)
.|+..||+||+|+|||+|.+|||||||||+||||+|++||||||||||||||+
T Consensus 694 TIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~ 773 (1622)
T PLN03130 694 TVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDA 773 (1622)
T ss_pred CHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCH
Confidence 47899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHHHHHHHHhhhcCCCCccc-cc
Q 000845 556 KTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEFQDLVNAHKETMGPETFG-EH 634 (1255)
Q Consensus 556 ~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~~~l~~~~~~~~~~~~~~-~~ 634 (1255)
+++++|+++|+.+.+++||+|+|||++++++.||+|++|++|+++++|+|+++++..+.+.++........+..... +.
T Consensus 774 ~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~ 853 (1622)
T PLN03130 774 HVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEE 853 (1622)
T ss_pred HHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhcccccccccccccc
Confidence 99999999999888899999999999999999999999999999999999999988788887775432111000000 00
Q ss_pred C-CCccchh-hh---ccccccC--C-CCCCCcchhhhHHHhhcCCCchhhHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Q 000845 635 V-SSKEDEN-EV---KKVEDEG--H-NNTSPADQLIKKEERETGDTGLKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQIL 706 (1255)
Q Consensus 635 ~-~~~~~~~-~~---~~~~~~~--~-~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (1255)
. ....... .. ....... . ..........++|+++.|.++++.|+.|+++.++++++.+++++.++..++.++
T Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~ 933 (1622)
T PLN03130 854 EDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVS 933 (1622)
T ss_pred cccccccccccccccccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000000 00 0000000 0 000011223456778889999999999999877665555556666777888889
Q ss_pred HHHHHhhhcCCC---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhH
Q 000845 707 QSLWIATYIPST---SISRLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRIL 783 (1255)
Q Consensus 707 ~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il 783 (1255)
.++|+++|.+.. ......|+++|++++++..++.+++.+++...+.+++.++|.+++++++++|++||+++|+|+++
T Consensus 934 ~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~Il 1013 (1622)
T PLN03130 934 SSTWLSEWTDQGTPKTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRII 1013 (1622)
T ss_pred HHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHH
Confidence 999999665431 22345678889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 000845 784 SRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLAS 863 (1255)
Q Consensus 784 ~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~ 863 (1255)
|||++|++.+|..++..+..++..++.+++.++++++.+|+.+++++|++++++.++.+|.+++|++++.+..+++|+++
T Consensus 1014 nR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~ 1093 (1622)
T PLN03130 1014 NRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYA 1093 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 99999999999999999999999999999999999999998888888888888888899999999999999999999999
Q ss_pred HHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-----ccH
Q 000845 864 HLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALCTTLLHKGH-----KGA 938 (1255)
Q Consensus 864 ~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~ 938 (1255)
++.|+++|+.|||+|+++++|.+.+.+..+...+..+.....++|+..++++++++++.+.+.+.+.. .+. ..+
T Consensus 1094 ~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~-~~~~~~~~~~~ 1172 (1622)
T PLN03130 1094 QFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQ-NGRAENQAAFA 1172 (1622)
T ss_pred HHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccccchhhh
Confidence 99999999999999999999999999999999999999999999999999988877655544433322 111 126
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCCC
Q 000845 939 GYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAP 1018 (1255)
Q Consensus 939 ~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~ 1018 (1255)
+.+|++++|++.+...+.++.+.+..++..+.|++|+.+|.+.|+|++...+...+++.||..|.|+|+||+|+|+++.+
T Consensus 1173 ~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~ 1252 (1622)
T PLN03130 1173 STMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELP 1252 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCC
Confidence 78899999999999999999999999999999999999999988876543233345567999999999999999987777
Q ss_pred ceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhh
Q 000845 1019 LVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYN 1098 (1255)
Q Consensus 1019 ~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~N 1098 (1255)
+||+|+||+|+||||||||||||||||||+++|+|+|+|++|+|.|||+||++++++++|++|++|||||+||+||||+|
T Consensus 1253 ~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreN 1332 (1622)
T PLN03130 1253 PVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFN 1332 (1622)
T ss_pred ceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCC
Q 000845 1099 LDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASID 1178 (1255)
Q Consensus 1099 l~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD 1178 (1255)
|||+++++|+|+|+ ||++++++++|.++|+||||+|+|+|.||||||||||||||||||+|+|||||||||+||
T Consensus 1333 Ld~~~~~tdeei~~------Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD 1406 (1622)
T PLN03130 1333 LDPFNEHNDADLWE------SLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVD 1406 (1622)
T ss_pred hCcCCCCCHHHHHH------HHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCC
Confidence 99999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHHHHhhh
Q 000845 1179 NATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYWSHAE 1251 (1255)
Q Consensus 1179 ~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~~~~~ 1251 (1255)
.+||+.||++|++.+++||+|+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|++++|..+.
T Consensus 1407 ~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~~~~ 1479 (1622)
T PLN03130 1407 VRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGAANA 1479 (1622)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcChhhh
Confidence 9999999999999999999999999999999999999999999999999999999878999999999886543
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3e-192 Score=1915.69 Aligned_cols=1196 Identities=33% Similarity=0.566 Sum_probs=1059.2
Q ss_pred CCCCCCCCCCCcCChhHHHHHHhHHHHHHhhccCCCCCCCCcCCCccCcHHHHHHHHHHHHHhhhccCCCCChhHHHHHH
Q 000845 43 DDDGDHVTPFDKAGLLRKITFWWLDPLMKKGKDKVLEDIDVPQLRLADRATTCYSLFIEELNDWNQKRPSAHPSILRALI 122 (1255)
Q Consensus 43 ~~~~~~~~~e~~a~~~s~~~f~W~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 122 (1255)
.+.++.++||+++|+|||++|+|++|++++|++++|+.+|||+|+++++++.++++|++.|+++.. .++++|+++++
T Consensus 220 ~~~~~~~~pe~~a~~~s~~~f~w~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~---~~~~~l~~~l~ 296 (1495)
T PLN03232 220 LRGGENICPERYASIFSRIYFSWMTPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEESR---RPKPWLLRALN 296 (1495)
T ss_pred ccccCCCCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhhc---cCCchHHHHHH
Confidence 344567899999999999999999999999999999999999999999999999999999987652 34689999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 123 SCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSS 202 (1255)
Q Consensus 123 ~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 202 (1255)
++|++.++.+++++++..++.+++|++++++++++++++. .+.++.++++++++.++.+++.++|.+...+++.++|..
T Consensus 297 ~~~~~~~~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 375 (1495)
T PLN03232 297 NSLGGRFWLGGIFKIGHDLSQFVGPVILSHLLQSMQEGDP-AWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRST 375 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999976542 356888888888888899999999999999999999999
Q ss_pred HHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000845 203 LCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWFHQIWSTSLQLCIAVVVVYYSVGLATIATLIVMILTVL 282 (1255)
Q Consensus 203 l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~~~~~~~ 282 (1255)
+...+|+|.++++....++.++|+++|+|++|++++.+....+|.+|..|++++++++++|+.+|++++++++++++++|
T Consensus 376 l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~p 455 (1495)
T PLN03232 376 LVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIP 455 (1495)
T ss_pred HHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999999998888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 283 GNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVLFWSSPI 362 (1255)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~ 362 (1255)
++.++++++.+.++++++.+|+|.+.++|++++||+||+|+||+.+.+++++.|++|++..++..+..++..+++...|.
T Consensus 456 l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~ 535 (1495)
T PLN03232 456 LQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPV 535 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888887777777888
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhcccccccCc
Q 000845 363 LIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRAELE 442 (1255)
Q Consensus 363 ~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~ 442 (1255)
++.+++|+.|.+.++.+|++.+|+++++++.+..|+..+|..+..+.++++|++||++||+.++...... .+ ..+..
T Consensus 536 ~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~--~~-~~~~~ 612 (1495)
T PLN03232 536 VVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN--PP-LQPGA 612 (1495)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc--CC-cCCCC
Confidence 8888999999998999999999999999999999999999999999999999999999998765322111 01 01123
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC--------------------
Q 000845 443 HSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG-------------------- 502 (1255)
Q Consensus 443 ~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G-------------------- 502 (1255)
..|+++|++|+|+.++++|+|+|+||++++||+++|+||+|||||||+++|+||++|.+|
T Consensus 613 ~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~ 692 (1495)
T PLN03232 613 PAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFN 692 (1495)
T ss_pred CcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCcccccc
Confidence 479999999999865556899999999999999999999999999999999999999987
Q ss_pred ----------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCC
Q 000845 503 ----------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALD 554 (1255)
Q Consensus 503 ----------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD 554 (1255)
.|+..||+||+|+|||+|.+|||||||||+||||+|++||||||||||||||
T Consensus 693 gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD 772 (1495)
T PLN03232 693 ATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALD 772 (1495)
T ss_pred ccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccC
Confidence 4788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHHHHHHHHhhhcCCCCcccc-
Q 000845 555 AKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEFQDLVNAHKETMGPETFGE- 633 (1255)
Q Consensus 555 ~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~~~l~~~~~~~~~~~~~~~- 633 (1255)
++++++|+++|+.+.+++||+|+|||+++.++.||+|++|++|+++++|+|+|+++..+.+.++..............+
T Consensus 773 ~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~ 852 (1495)
T PLN03232 773 AHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTN 852 (1495)
T ss_pred HHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhccccccccccccc
Confidence 9999999999998888999999999999999999999999999999999999999888888887754332111000000
Q ss_pred cCCCc--cchhhhc--cccccCCC-CCCCcchhhhHHHhhcCCCchhhHHHHHhcccchHHHHHHHHHHHHHHHHHHHHH
Q 000845 634 HVSSK--EDENEVK--KVEDEGHN-NTSPADQLIKKEERETGDTGLKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQS 708 (1255)
Q Consensus 634 ~~~~~--~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1255)
..... ....+.. ........ .........++|+++.|.++++.|++|+++.++++++.+++++.++..++.++.+
T Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1495)
T PLN03232 853 DENILKLGPTVTIDVSERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSS 932 (1495)
T ss_pred ccccccccccccccccccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000000 00000000 0001112456677888999999999999987766655555666667778888899
Q ss_pred HHHhhhcCCC---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHH
Q 000845 709 LWIATYIPST---SISRLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSR 785 (1255)
Q Consensus 709 ~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r 785 (1255)
+|+++|.+.. .....+|+++|++++++..++.+++.+++...+.+++.++|.+++++++++|++||+++|+|+++||
T Consensus 933 ~wl~~w~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr 1012 (1495)
T PLN03232 933 TWLSIWTDQSTPKSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINR 1012 (1495)
T ss_pred HHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHH
Confidence 9999655432 2234678899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000845 786 VSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHL 865 (1255)
Q Consensus 786 ~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~ 865 (1255)
|++|++.+|..++..+..++..++.+++.++++++.+|...++++|+.++++.++.+|.+++|++++.+..+++|+++++
T Consensus 1013 ~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~ 1092 (1495)
T PLN03232 1013 FSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQF 1092 (1495)
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 99999999999999999999999999999888888888777778888888888888999999999999999999999999
Q ss_pred HHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-----cHHH
Q 000845 866 AETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALCTTLLHKGHK-----GAGY 940 (1255)
Q Consensus 866 ~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 940 (1255)
.|+++|+.|||+|+.+++|.+++.+..+...+..+.....++|+..+++.++.+++.+.+.+.+.. .+.. .++.
T Consensus 1093 ~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~ 1171 (1495)
T PLN03232 1093 GEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLR-NGNAENQAGFAST 1171 (1495)
T ss_pred HHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccccchHH
Confidence 999999999999999999999999999999999998888999999998877765544443333321 2221 2567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCCCce
Q 000845 941 TGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLV 1020 (1255)
Q Consensus 941 ~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~v 1020 (1255)
+|++++|+..+...+.++++.+..++..+.|++|+.++.+.|+|++...+...+++.||..|.|+|+||+|+|+++.++|
T Consensus 1172 ~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~v 1251 (1495)
T PLN03232 1172 MGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPV 1251 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcc
Confidence 88899999999999999999999999999999999999998877543222233456799999999999999998777789
Q ss_pred eeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcc
Q 000845 1021 LRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLD 1100 (1255)
Q Consensus 1021 L~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~ 1100 (1255)
|+|+||+|+||||||||||||||||||+++|+|+|+|++|+|.|||+|+++++++++|++|++|||||+||+||||+|||
T Consensus 1252 L~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~ 1331 (1495)
T PLN03232 1252 LHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNID 1331 (1495)
T ss_pred cccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHH
Q 000845 1101 PLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNA 1180 (1255)
Q Consensus 1101 ~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~ 1180 (1255)
|+++++|+|+|+ |++++++++++.++|+||||.++|+|.||||||||||||||||+|+|+|||||||||+||++
T Consensus 1332 ~~~~~sdeei~~------al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~ 1405 (1495)
T PLN03232 1332 PFSEHNDADLWE------ALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVR 1405 (1495)
T ss_pred CCCCCCHHHHHH------HHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHH
Confidence 998999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHHHHhhhc
Q 000845 1181 TDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYWSHAEK 1252 (1255)
Q Consensus 1181 te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~~~~~~ 1252 (1255)
||+.||++|++.+++||+|+||||++|+.+||||+|||+|+|+|+|+|+||+++++|.|++|++++|..+..
T Consensus 1406 Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~~~~~ 1477 (1495)
T PLN03232 1406 TDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPANAQ 1477 (1495)
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChhhhH
Confidence 999999999999999999999999999999999999999999999999999998778999999998865443
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.2e-190 Score=1898.68 Aligned_cols=1190 Identities=34% Similarity=0.583 Sum_probs=1054.9
Q ss_pred CCCCCCcCChhHHHHHHhHHHHHHhhccCCCCCCCCcCCCccCcHHHHHHHHHHHHHhhhcc------------------
Q 000845 48 HVTPFDKAGLLRKITFWWLDPLMKKGKDKVLEDIDVPQLRLADRATTCYSLFIEELNDWNQK------------------ 109 (1255)
Q Consensus 48 ~~~~e~~a~~~s~~~f~W~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~------------------ 109 (1255)
.++||+++|++||++|||++|++++||+++|+.+|||+++++++++.+.++|++.|+++.++
T Consensus 200 ~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 279 (1522)
T TIGR00957 200 NPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSKP 279 (1522)
T ss_pred CCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHHHHHHHHHHHHHHHhhcccccccccccccccccc
Confidence 47899999999999999999999999999999999999999999999999999999876311
Q ss_pred --------------------CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHH
Q 000845 110 --------------------RPSAHPSILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYS 169 (1255)
Q Consensus 110 --------------------~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~ 169 (1255)
++.++++|+++++++||+.++.+++++++..++.+++|++++.+++++.++....+.||+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~ 359 (1522)
T TIGR00957 280 KGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYF 359 (1522)
T ss_pred cccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHH
Confidence 012347899999999999999999999999999999999999999999766444557899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHHHHHH
Q 000845 170 LAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWFHQIW 249 (1255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~~~~~ 249 (1255)
+++++++++++.+++.++|.|...+++.++|+++...||+|+|+++....++.++|+++|+|++|++++..+..++|.+|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~ 439 (1522)
T TIGR00957 360 YTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIW 439 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHH
Q 000845 250 STSLQLCIAVVVVYYSVGLATIATLIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFK 329 (1255)
Q Consensus 250 ~~pl~i~v~~~lL~~~lG~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~ 329 (1255)
..|++++++++++|..+||++++|++++++++|++.++++.+.++++++++.+|+|++.++|++++||+||+|+||+.|.
T Consensus 440 ~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~ 519 (1522)
T TIGR00957 440 SAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFL 519 (1522)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 330 NVIEKLRSEEYGWLKVLQLQKGYYMVLFWSSPILIGAATLLTCYFL--GIPLNPSNVFTFLATLRILQEPIRLLPDVFGA 407 (1255)
Q Consensus 330 ~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~ 407 (1255)
+++++.|++|++..++..++..+..+.++.+|.++.+++|+.|.+. ++.++++.+|+++++|++++.|+..+|..+..
T Consensus 520 ~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~ 599 (1522)
T TIGR00957 520 DKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISS 599 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888887778888999999999988776 46799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcchhcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHH
Q 000845 408 FIEAKVSLDRIANFLEAPELQNSDMQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKS 487 (1255)
Q Consensus 408 ~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKS 487 (1255)
+.++++|++||++||+.++.++...............|+++|++|+|+.+ ++++|+|+||++++|++++|+||+|||||
T Consensus 600 ~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKS 678 (1522)
T TIGR00957 600 IVQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKS 678 (1522)
T ss_pred HHHHHHHHHHHHHHHcCcccccccccccccCCCCCCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHH
Confidence 99999999999999988765332111111000012379999999999753 34799999999999999999999999999
Q ss_pred HHHHHHhccCCCCCC-----------------------------------------------cccCCCCCCCccccccCC
Q 000845 488 TLLAAILGELPRLQG-----------------------------------------------MDLKMLPFGDLTQIGERG 520 (1255)
Q Consensus 488 TLL~~llGe~~~~~G-----------------------------------------------~Di~~lp~gd~T~iGe~G 520 (1255)
||+++|+|+++|.+| .|+..+|+||+|.+|++|
T Consensus 679 TLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g 758 (1522)
T TIGR00957 679 SLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKG 758 (1522)
T ss_pred HHHHHHhCCCccCCcEEEECCEEEEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCC
Confidence 999999999999988 356789999999999999
Q ss_pred CcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHH--hhhcCCcEEEEEccCCCccccCCEEEEEeCCE
Q 000845 521 VNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYV--MGALSKKTVLLVTHQVDFLPAFDSILLISGGE 598 (1255)
Q Consensus 521 ~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i--~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~ 598 (1255)
.+|||||||||+||||+|++|+||||||||||||+++++++++.++ .++++++|+|+|||++++++.||+|++|++|+
T Consensus 759 ~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~ 838 (1522)
T TIGR00957 759 VNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGK 838 (1522)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCe
Confidence 9999999999999999999999999999999999999999999988 45678999999999999999999999999999
Q ss_pred EEEecChhHHhhcchHHHHHHHHhhhcCCC---Ccc------cccCCC----c--c----chhhh-------ccc-cc--
Q 000845 599 IIQAATYDHLLVTSQEFQDLVNAHKETMGP---ETF------GEHVSS----K--E----DENEV-------KKV-ED-- 649 (1255)
Q Consensus 599 i~~~G~~~el~~~~~~~~~l~~~~~~~~~~---~~~------~~~~~~----~--~----~~~~~-------~~~-~~-- 649 (1255)
++++|+++++....+.+.++.......... .+. .+.... + . ..++. ... ..
T Consensus 839 i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (1522)
T TIGR00957 839 ISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQS 918 (1522)
T ss_pred EEeeCCHHHHHhcchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccc
Confidence 999999999988777777776533211100 000 000000 0 0 00000 000 00
Q ss_pred -----c-C-C--CCCCCcchhhhHHHhhcCCCchhhHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--
Q 000845 650 -----E-G-H--NNTSPADQLIKKEERETGDTGLKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPST-- 718 (1255)
Q Consensus 650 -----~-~-~--~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 718 (1255)
. . . +......+..++|+++.|.++++.|+.|+++.+.+ .+++++++.++..++..+.++|+++|.+..
T Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~ 997 (1522)
T TIGR00957 919 RHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIGLF-ITFLSIFLFVCNHVSALASNYWLSLWTDDPMV 997 (1522)
T ss_pred ccccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 0 0 0 00001123345667778999999999999987643 333445555667778889999999665431
Q ss_pred ---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhh
Q 000845 719 ---SISRLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDL 795 (1255)
Q Consensus 719 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~ 795 (1255)
......++.+|++++++..++.++..++..+.+.++++++|++++++++++|++||+++|+|+++|||++|++.+|.
T Consensus 998 ~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~ 1077 (1522)
T TIGR00957 998 NGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDS 1077 (1522)
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHH
Confidence 12235677789999998888888888888999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHH
Q 000845 796 DLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTI 875 (1255)
Q Consensus 796 ~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tI 875 (1255)
.++..+..++..++.+++.++++++.+|+++++++|+++++++++++|.+++|++++.+.++++|+++++.|+++|+.||
T Consensus 1078 ~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tI 1157 (1522)
T TIGR00957 1078 MIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVI 1157 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHH
Confidence 99999999999999999999999999999988888988889999999999999999999999999999999999999999
Q ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHH
Q 000845 876 RAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALCTTLLHKGHKGAGYTGMALSFGLSLNDFL 955 (1255)
Q Consensus 876 raf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l 955 (1255)
|+|+++++|.+++.+..+...+..+.....++|+..++++++.+++.+++.+.+ ...+.+++|.+|++++|+..+...+
T Consensus 1158 raf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~g~l~~~l~~~~~~~~~l 1236 (1522)
T TIGR00957 1158 RAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFAALFAV-ISRHSLSAGLVGLSVSYSLQVTFYL 1236 (1522)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987765544443332 2246789999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEE
Q 000845 956 VYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIG 1035 (1255)
Q Consensus 956 ~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~va 1035 (1255)
.+++..+..++..+.|++|+.+|.+.++|.+...+...+++.||..|.|+|+||+|+|+++.++||+|+||+|+||||||
T Consensus 1237 ~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~Gekia 1316 (1522)
T TIGR00957 1237 NWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVG 1316 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEE
Confidence 99999999999999999999999988777543222334556799999999999999998776789999999999999999
Q ss_pred EEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccC
Q 000845 1036 VVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTI 1115 (1255)
Q Consensus 1036 IvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~ 1115 (1255)
||||||||||||+++|+|+|+|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|+|+
T Consensus 1317 IVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~--- 1393 (1522)
T TIGR00957 1317 IVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWW--- 1393 (1522)
T ss_pred EECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHH---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCC
Q 000845 1116 PSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFAN 1195 (1255)
Q Consensus 1116 ~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~ 1195 (1255)
|+++|+++++|.++|+||||.|+|+|.+|||||||||||||||||+|+|||||||||+||++||+.||++|++.+++
T Consensus 1394 ---al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~ 1470 (1522)
T TIGR00957 1394 ---ALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFED 1470 (1522)
T ss_pred ---HHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHHH
Q 000845 1196 CTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1196 ~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
||||+||||++|+.+||||+|||+|+|+|+|+|+||+++ +|.|++|+++.|
T Consensus 1471 ~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~g 1521 (1522)
T TIGR00957 1471 CTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDAG 1521 (1522)
T ss_pred CEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHcC
Confidence 999999999999999999999999999999999999987 799999999864
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3.6e-187 Score=1862.50 Aligned_cols=1187 Identities=27% Similarity=0.469 Sum_probs=1040.4
Q ss_pred CCCCCCcCChhHHHHHHhHHHHHHhhccCCCCCCCCcCCCccCcHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHH
Q 000845 48 HVTPFDKAGLLRKITFWWLDPLMKKGKDKVLEDIDVPQLRLADRATTCYSLFIEELNDWNQKRPSAHPSILRALISCHWK 127 (1255)
Q Consensus 48 ~~~~e~~a~~~s~~~f~W~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 127 (1255)
..+||+++|+|||++|||++|++++||+++|+.+|||+|+++++++.++++|++.|+++..+ +.++++|+++++++|++
T Consensus 2 ~~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~-~~~~~~L~~~l~~~~~~ 80 (1490)
T TIGR01271 2 QRSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELAS-AKKNPKLLNALRRCFFW 80 (1490)
T ss_pred CCCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhc-cCCCChHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999876432 24568999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 128 SILFSGFFALIKVISISAGPLFLKAFISAAEGEII-FKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSLCAA 206 (1255)
Q Consensus 128 ~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 206 (1255)
.++..++++++..++.+++|+++++++++++.++. ..+.+|++++++++++++.+++.+++.|...++++++|+++..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~ 160 (1490)
T TIGR01271 81 RFVFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSL 160 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999964322 23568999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000845 207 ISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWFHQIWSTSLQLCIAVVVVYYSVGLATIATLIVMILTVLGNSP 286 (1255)
Q Consensus 207 iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~~~~~~~~~~~ 286 (1255)
||+|+|+++....++.++|+++|+|++|+++|.+++..+|.+|.+|+++++++++||+++||++++|++++++++|++.+
T Consensus 161 iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~ 240 (1490)
T TIGR01271 161 IYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQAC 240 (1490)
T ss_pred HHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 287 LAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVLFWSSPILIGA 366 (1255)
Q Consensus 287 ~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (1255)
+++++.++++++++.+|+|++.++|+|++||+||+||||+.|.+++++.|++|++.+++..++.++..++++..|.++++
T Consensus 241 ~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1490)
T TIGR01271 241 LGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVF 320 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888888888889999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhcccccccCcceE
Q 000845 367 ATLLTCYFLGIPLNPSNVFTFLATLRILQEPIR-LLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRAELEHSI 445 (1255)
Q Consensus 367 ~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~-~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~i 445 (1255)
++|++|.+.++ ++++.+||++++|++++.|+. .+|..+..+.++.+|++||++||..+|.+.... . .....|
T Consensus 321 ~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~--~----~~~~~i 393 (1490)
T TIGR01271 321 LSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY--N----LTTTEV 393 (1490)
T ss_pred HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc--c----CCCCce
Confidence 99999987754 789999999999999999985 799999999999999999999999887643211 0 123469
Q ss_pred EEEeeEEEecCCC-------------------------------CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHh
Q 000845 446 FIKSADLSWEADL-------------------------------LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAIL 494 (1255)
Q Consensus 446 ~~~~~~f~w~~~~-------------------------------~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~ll 494 (1255)
+++|++|+|+... .+++|+|+||+|++|++++|+|||||||||||++|+
T Consensus 394 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~ 473 (1490)
T TIGR01271 394 EMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIM 473 (1490)
T ss_pred EEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHh
Confidence 9999999996310 146899999999999999999999999999999999
Q ss_pred ccCCCCCC-----------------------------------------------cccCCCCCCCccccccCCCcCChHH
Q 000845 495 GELPRLQG-----------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQ 527 (1255)
Q Consensus 495 Ge~~~~~G-----------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQ 527 (1255)
|+++|.+| .|+..+|+||.|.||++|.+|||||
T Consensus 474 G~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGq 553 (1490)
T TIGR01271 474 GELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQ 553 (1490)
T ss_pred CCCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHH
Confidence 99999988 3677899999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhH
Q 000845 528 KQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDH 607 (1255)
Q Consensus 528 kqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~e 607 (1255)
||||+||||+|++|+||||||||||||++++++++++|+.++++++|+|+|||+++.++.||+|++|++|++++.|++++
T Consensus 554 kqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~ 633 (1490)
T TIGR01271 554 RARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSE 633 (1490)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 99999999999999999999999999999999999999888888999999999999999999999999999999999999
Q ss_pred HhhcchHHHHHHHHhhh----------------------c-CC-----CCc-------cccc--C---------------
Q 000845 608 LLVTSQEFQDLVNAHKE----------------------T-MG-----PET-------FGEH--V--------------- 635 (1255)
Q Consensus 608 l~~~~~~~~~l~~~~~~----------------------~-~~-----~~~-------~~~~--~--------------- 635 (1255)
+......+.+.+..... . .. ++. +... .
T Consensus 634 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (1490)
T TIGR01271 634 LQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASAR 713 (1490)
T ss_pred HHhcChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 98765555544421000 0 00 000 0000 0
Q ss_pred ---------------CCccchhhhc--------c---c-----------------------------c---ccC------
Q 000845 636 ---------------SSKEDENEVK--------K---V-----------------------------E---DEG------ 651 (1255)
Q Consensus 636 ---------------~~~~~~~~~~--------~---~-----------------------------~---~~~------ 651 (1255)
+.+....+.. . . . ...
T Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1490)
T TIGR01271 714 KFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQ 793 (1490)
T ss_pred ccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccc
Confidence 0000000000 0 0 0 000
Q ss_pred ----------------C-------C-CCC-------------CcchhhhHHHhhcCCCchhhHHHHHhcccchHHHHHHH
Q 000845 652 ----------------H-------N-NTS-------------PADQLIKKEERETGDTGLKPYIDYLSHKKGFLYFTLST 694 (1255)
Q Consensus 652 ----------------~-------~-~~~-------------~~~~~~~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~ 694 (1255)
. . ... ......++|++..|.++|++|++|+++.+++.++.+++
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~ 873 (1490)
T TIGR01271 794 TSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFC 873 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHH
Confidence 0 0 000 00112344667789999999999999877666555556
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCC---------C-C-----------C-ChhHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 695 FAYLIFLVAQILQSLWIATYIPS---------T-S-----------I-SRLKL-VIVYSGIGIGMMFLLLTRSFLVVYLG 751 (1255)
Q Consensus 695 ~~~~~~~~~~~~~~~~l~~~~~~---------~-~-----------~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1255)
++.++..++..+.++|+.+|... . . . ...+| +++|++++++..++.+++.+++...+
T Consensus 874 ~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1490)
T TIGR01271 874 LVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTL 953 (1490)
T ss_pred HHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677788999999999844321 0 0 0 11122 44555555556677788999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000845 752 LEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVP 831 (1255)
Q Consensus 752 ~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 831 (1255)
.+++.++|.+++++++++|++||+++|+|+++|||++|++.+|..++..+..++..++.+++.++++++.+|+++++++|
T Consensus 954 ~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~ 1033 (1490)
T TIGR01271 954 LTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIP 1033 (1490)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 832 MIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQ 911 (1255)
Q Consensus 832 ~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 911 (1255)
+++++++++++|.+.+|++++.+..+++|+++++.|+++|+.|||+|+++++|.+++.+..+.+.+.++.....++|+..
T Consensus 1034 l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 1113 (1490)
T TIGR01271 1034 VAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQM 1113 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCccccc-
Q 000845 912 RLETLSAIVLATSALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQ- 990 (1255)
Q Consensus 912 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~- 990 (1255)
+++++..+++..+.++.+. ....++|.+|++++|++.+...+.+++..+..++..+.|++|+.+|.+.|+|++...+
T Consensus 1114 ~~~~i~~~~~~~~~~l~~~--~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~ 1191 (1490)
T TIGR01271 1114 RIDIIFVFFFIAVTFIAIG--TNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGG 1191 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHH--HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccc
Confidence 9998776544433333222 1235678899999999999999999999999999999999999999988776542111
Q ss_pred -------------CCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC
Q 000845 991 -------------KNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP 1057 (1255)
Q Consensus 991 -------------~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~ 1057 (1255)
...+++.||..|.|+|+||+|+|+++.++||+|+||+|+||||||||||||||||||+++|+|+++
T Consensus 1192 ~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~- 1270 (1490)
T TIGR01271 1192 GGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS- 1270 (1490)
T ss_pred ccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-
Confidence 112345799999999999999998877889999999999999999999999999999999999998
Q ss_pred CCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCcc
Q 000845 1058 TGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLD 1137 (1255)
Q Consensus 1058 ~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gld 1137 (1255)
++|+|.|||+||++++++++|++|+||||||+||+||||+||||+++++|+++|+ ||+++++++++.++|+|||
T Consensus 1271 ~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~------aL~~~~L~~~i~~lp~GLd 1344 (1490)
T TIGR01271 1271 TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWK------VAEEVGLKSVIEQFPDKLD 1344 (1490)
T ss_pred CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHH------HHHHCCCHHHHHhCccccc
Confidence 7999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEE
Q 000845 1138 SLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSM 1217 (1255)
Q Consensus 1138 t~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl 1217 (1255)
|+|+|+|.||||||||||||||||||+|+|||||||||+||++|++.|++.|++.+++||||+||||++++.+||||+||
T Consensus 1345 t~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL 1424 (1490)
T TIGR01271 1345 FVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVI 1424 (1490)
T ss_pred cccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCEEEEEcChhHHhhcCChHHHHHHHHHHHhhhc
Q 000845 1218 SDGKLVEYDEPKKLLRRQDSLFAQLVKEYWSHAEK 1252 (1255)
Q Consensus 1218 ~~G~ive~G~~~eLl~~~~~~f~~l~~~~~~~~~~ 1252 (1255)
++|+|+|+|+|++|+++ +|.|++|++++++.+..
T Consensus 1425 ~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~~~~~~ 1458 (1490)
T TIGR01271 1425 EGSSVKQYDSIQKLLNE-TSLFKQAMSAADRLKLF 1458 (1490)
T ss_pred ECCEEEEeCCHHHHHcC-CcHHHHHHHHhChhccc
Confidence 99999999999999974 89999999998766543
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.7e-180 Score=1794.99 Aligned_cols=1199 Identities=30% Similarity=0.471 Sum_probs=1036.3
Q ss_pred CCCCCCCCcCChhHHHHHHhHHHHHHhhccCCCCCCCCcCCCccCcHHHHHHHHHHHHHhhh------------------
Q 000845 46 GDHVTPFDKAGLLRKITFWWLDPLMKKGKDKVLEDIDVPQLRLADRATTCYSLFIEELNDWN------------------ 107 (1255)
Q Consensus 46 ~~~~~~e~~a~~~s~~~f~W~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~~------------------ 107 (1255)
...+.||+++|||.++++.|++|.+..+.|+.|+.+|||+...+.++.+...++.+..++..
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (1560)
T PTZ00243 56 PYTPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTL 135 (1560)
T ss_pred CCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeec
Confidence 36678999999999999999999999999999999999999999998777666655433200
Q ss_pred --------------c-----------------------------------------------------------------
Q 000845 108 --------------Q----------------------------------------------------------------- 108 (1255)
Q Consensus 108 --------------~----------------------------------------------------------------- 108 (1255)
+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (1560)
T PTZ00243 136 DASSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLS 215 (1560)
T ss_pred cccccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeec
Confidence 0
Q ss_pred ----------cCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHH
Q 000845 109 ----------KRPSAHPSILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVK 178 (1255)
Q Consensus 109 ----------~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1255)
.+.++..+|+++++++||+.++.+++++++..++.+++|++++.+++++++++.....++++++++++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~ 295 (1560)
T PTZ00243 216 STGSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQ 295 (1560)
T ss_pred ccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHH
Confidence 0113456999999999999999999999999999999999999999999766544456888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhc--cCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000845 179 CVESLAGRHWFFQSRLTGLKIRSSLCAAISSKQLRLSNAAKM--MHTSGDIVNYVTVDAYRIGEFPFWFHQIWSTSLQLC 256 (1255)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~iy~K~l~l~~~~~~--~~~~g~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~ 256 (1255)
++.+++.++|.|...+.+.++|++|...||+|+++++..+.. +.++|+++|+|++|++++.+++.++|.+|.+|++++
T Consensus 296 ~~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li 375 (1560)
T PTZ00243 296 LIQSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLL 375 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999876654 568999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHH
Q 000845 257 IAVVVVYYSVGLATIATLIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLR 336 (1255)
Q Consensus 257 v~~~lL~~~lG~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R 336 (1255)
+++++||.++||++++|++++++++|++.++++++.++++++++.+|+|++.++|++++||+||+||||+.|.++|++.|
T Consensus 376 ~~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R 455 (1560)
T PTZ00243 376 LSILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKR 455 (1560)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 337 SEEYGWLKVLQLQKGYYMVLFWSSPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLD 416 (1255)
Q Consensus 337 ~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~ 416 (1255)
++|++.+++..+..++..++++++|.++.+++|++|++.+++||++.+||++++|++++.|+.++|..++.+.++++|++
T Consensus 456 ~~El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~ 535 (1560)
T PTZ00243 456 ARELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIK 535 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCcch----h------------c-------------cc----------------------------ccc
Q 000845 417 RIANFLEAPELQNSDM----Q------------Q-------------VC----------------------------SRA 439 (1255)
Q Consensus 417 Ri~~fL~~~e~~~~~~----~------------~-------------~~----------------------------~~~ 439 (1255)
||++||+.+|...... + . .+ ...
T Consensus 536 RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (1560)
T PTZ00243 536 RISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKR 615 (1560)
T ss_pred HHHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccccc
Confidence 9999998876311000 0 0 00 000
Q ss_pred cCcceEEEEeeEEEecCC-------------------------------------CCCCccccceeeeeCCcEEEEEccC
Q 000845 440 ELEHSIFIKSADLSWEAD-------------------------------------LLNPTLRNINLEVKPAEKFAICGEV 482 (1255)
Q Consensus 440 ~~~~~i~~~~~~f~w~~~-------------------------------------~~~~~L~~inl~i~~G~l~~IvG~~ 482 (1255)
.....+.++|++|+|+.. .++++|+|+||+|++|++++|+|||
T Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~n 695 (1560)
T PTZ00243 616 HPSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGAT 695 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCC
Confidence 011246677777765421 1246899999999999999999999
Q ss_pred CCCHHHHHHHHhccCCCCCC-----------------------------------------------cccCCCCCCCccc
Q 000845 483 GAGKSTLLAAILGELPRLQG-----------------------------------------------MDLKMLPFGDLTQ 515 (1255)
Q Consensus 483 GsGKSTLL~~llGe~~~~~G-----------------------------------------------~Di~~lp~gd~T~ 515 (1255)
||||||||++|+|+++|.+| .|++.+|+|++|.
T Consensus 696 GsGKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~ 775 (1560)
T PTZ00243 696 GSGKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETE 775 (1560)
T ss_pred CCcHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHH
Confidence 99999999999999999888 3567789999999
Q ss_pred cccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEe
Q 000845 516 IGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLIS 595 (1255)
Q Consensus 516 iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~ 595 (1255)
+|++|.+|||||||||+||||+|++|+||||||||||||++++++++++++.+.++|+|+|+|||+++.++.||+|++|+
T Consensus 776 i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~ 855 (1560)
T PTZ00243 776 IGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALG 855 (1560)
T ss_pred hcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999877778999999999999999999999999
Q ss_pred CCEEEEecChhHHhhcchHHHHHHHHhhhcCCCCc--cc-ccCCCcc-c------hhh-hccccc-cC---CCCCCCcch
Q 000845 596 GGEIIQAATYDHLLVTSQEFQDLVNAHKETMGPET--FG-EHVSSKE-D------ENE-VKKVED-EG---HNNTSPADQ 660 (1255)
Q Consensus 596 ~G~i~~~G~~~el~~~~~~~~~l~~~~~~~~~~~~--~~-~~~~~~~-~------~~~-~~~~~~-~~---~~~~~~~~~ 660 (1255)
+|++++.|+++++.+. +.+.++........+... .. +....+. . ... ...... .. ........+
T Consensus 856 ~G~i~~~G~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1560)
T PTZ00243 856 DGRVEFSGSSADFMRT-SLYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGR 934 (1560)
T ss_pred CCEEEEecCHHHHHhC-hHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccch
Confidence 9999999999999864 345555433211110000 00 0000000 0 000 000000 00 000111223
Q ss_pred hhhHHHhhcCCCchhhHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CCCChhHHHHHHHHHHHHHHHH
Q 000845 661 LIKKEERETGDTGLKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS-TSISRLKLVIVYSGIGIGMMFL 739 (1255)
Q Consensus 661 ~~~~~~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 739 (1255)
..++|++..|.++|+.|+.|++..++..+++..+++.++..++..+.++|+++|... ...+...|+.+|+++.++..++
T Consensus 935 l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~l~~y~~~~~~~~~~ 1014 (1560)
T PTZ00243 935 LMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSFKLSAATYLYVYLGIVLLGTFS 1014 (1560)
T ss_pred hhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccHHHHHHHHHHHHHHH
Confidence 455667778999999999999987766555555555566677888899999955432 2233456778888888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 000845 740 LLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLG 819 (1255)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~ 819 (1255)
.+++.+.....+.++++++|.+++++++++|+.|||++++|+++|||++|++.+|..++..+..++..++.+++.+++++
T Consensus 1015 ~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~ 1094 (1560)
T PTZ00243 1015 VPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTS 1094 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHH
Q 000845 820 ALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSF 899 (1255)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~ 899 (1255)
+.+|+++++++|+.++++.+.++|.+..|++++.....++|+++++.|++.|+.|||+|+.++.+.+++.+..+.+.+..
T Consensus 1095 ~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~ 1174 (1560)
T PTZ00243 1095 ASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCS 1174 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 000845 900 FHSFTAREWLIQRLETLSAIVLATSALCTT---LLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLN 976 (1255)
Q Consensus 900 ~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~ 976 (1255)
+.....++|+..+++++..++..+++++.+ ....+..++|.++++++|+..+...+.+++..+..++..+.|++|+.
T Consensus 1175 ~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~ 1254 (1560)
T PTZ00243 1175 YLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLL 1254 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999887765544433322 22234567899999999999999999999999999999999999999
Q ss_pred HHhcC-CCCCcccc-----------------------cCCCCC---CCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEe
Q 000845 977 QYMRI-PSEAPELV-----------------------QKNSPA---PDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFE 1029 (1255)
Q Consensus 977 ~~~~~-~~e~~~~~-----------------------~~~~~~---~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~ 1029 (1255)
+|.+. |+|+.... +...++ +.||..|.|+|+||+|+|+++.++||+||||+|+
T Consensus 1255 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I~ 1334 (1560)
T PTZ00243 1255 YYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSFRIA 1334 (1560)
T ss_pred HHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceEEEC
Confidence 99863 33321000 001111 2355678999999999998877789999999999
Q ss_pred CCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCCCChHH
Q 000845 1030 GGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQE 1109 (1255)
Q Consensus 1030 ~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~e 1109 (1255)
||||||||||||||||||+++|+|+|+|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|
T Consensus 1335 ~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdee 1414 (1560)
T PTZ00243 1335 PREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAE 1414 (1560)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccC-CCeEEEecCCCCCCHHHHHHHHHH
Q 000845 1110 IWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRR-RQILVLDEATASIDNATDSILQNT 1188 (1255)
Q Consensus 1110 i~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~-~~ILiLDE~TS~LD~~te~~i~~~ 1188 (1255)
+|+ |+++|+++++|.++|+||||.|+|+|.|||||||||||||||||++ |+|||||||||+||++||+.||++
T Consensus 1415 I~~------Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~ 1488 (1560)
T PTZ00243 1415 VWA------ALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQAT 1488 (1560)
T ss_pred HHH------HHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999996 899999999999999999999999
Q ss_pred HHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHHHHhhh
Q 000845 1189 IRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYWSHAE 1251 (1255)
Q Consensus 1189 l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~~~~~ 1251 (1255)
|++.+++||||+||||++|+.+||+|+|||+|+|+|+|+|+||+++++|.|++|+++.++.+.
T Consensus 1489 L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~~~~ 1551 (1560)
T PTZ00243 1489 VMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGRSEA 1551 (1560)
T ss_pred HHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChhHH
Confidence 999999999999999999999999999999999999999999998778999999999876543
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-150 Score=1381.12 Aligned_cols=1089 Identities=21% Similarity=0.255 Sum_probs=833.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-----c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 132 SGFFALIKVISISAGPLFLKAFISAAEGEII-----F-KYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSLCA 205 (1255)
Q Consensus 132 ~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~ 205 (1255)
+.+..++..+.....-++..++.+.+..... . ...++.+...-++..+...+...+|.+.+.|...++|..+..
T Consensus 33 G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~ 112 (1228)
T KOG0055|consen 33 GSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLK 112 (1228)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444566777776654331 1 112222222222222223345678999999999999999999
Q ss_pred HHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHH
Q 000845 206 AISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-----WFHQIWSTSLQLCIAVVVVYYSVGL-ATIATLIVMIL 279 (1255)
Q Consensus 206 ~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-----~~~~~~~~pl~i~v~~~lL~~~lG~-~~l~g~~~~~~ 279 (1255)
.+.||-..+.. ...+|++++.|+.|+++|.+++. .+|.+-....-++++ +..+| .+++++.+.++
T Consensus 113 ~iLrQdi~~fD----~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~-----F~~~W~Ltlv~l~~~Pl 183 (1228)
T KOG0055|consen 113 AILRQDIGWFD----TNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIG-----FYYGWKLTLVMLSFIPL 183 (1228)
T ss_pred HHHhCccceee----cccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH
Confidence 99998887653 44569999999999999998753 333333322222333 33366 78899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Q 000845 280 TVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVL--F 357 (1255)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~--~ 357 (1255)
++.....+++.+.+...+.+++..+.-++++|++++||+|-.|+-|+...++..+.=+.-.+...+..+..++...+ +
T Consensus 184 i~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~~g~~~G~~~G~~~~ 263 (1228)
T KOG0055|consen 184 IAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIKKGLFKGLGLGFTFF 263 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999998874444444333333433333222 2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCcchhccc
Q 000845 358 WSSPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPE-LQNSDMQQVC 436 (1255)
Q Consensus 358 ~~~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e-~~~~~~~~~~ 436 (1255)
+.-......+|||...+..+..+++++|+++...-+-...|++..+.+..+.+|++|..+|.+.++... ++........
T Consensus 264 ~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~ 343 (1228)
T KOG0055|consen 264 LLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRV 343 (1228)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhcCCCCCCcccccCCc
Confidence 222334566778877777788999999999966666677888888899999999999999999998743 3332211111
Q ss_pred ccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC--------------
Q 000845 437 SRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG-------------- 502 (1255)
Q Consensus 437 ~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G-------------- 502 (1255)
. ....+.|+|+|++|+||.+++.++|+|+||+||+|+.+++|||+||||||++++|.|+|+|.+|
T Consensus 344 ~-~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~ 422 (1228)
T KOG0055|consen 344 L-SSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNL 422 (1228)
T ss_pred c-cccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcch
Confidence 1 1256889999999999999989999999999999999999999999999999999999999999
Q ss_pred -----------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHH
Q 000845 503 -----------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLAR 535 (1255)
Q Consensus 503 -----------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLAR 535 (1255)
..+..||+|++|.+||+|..|||||||||||||
T Consensus 423 ~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIAR 502 (1228)
T KOG0055|consen 423 KWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIAR 502 (1228)
T ss_pred HHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHH
Confidence 246789999999999999999999999999999
Q ss_pred HHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHH
Q 000845 536 ALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEF 615 (1255)
Q Consensus 536 Aly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~ 615 (1255)
||.++|+||||||||||||++++ ++++++++...+|||+|+||||++++++||+|++|++|+|+|.|+|+||+...+.|
T Consensus 503 alv~~P~ILLLDEaTSaLD~~se-~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~G~Y 581 (1228)
T KOG0055|consen 503 ALVRNPKILLLDEATSALDAESE-RVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQGTHDELIALGGIY 581 (1228)
T ss_pred HHHhCCCEEEecCcccccCHHHH-HHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEecCHHHHHhccchH
Confidence 99999999999999999999996 57799999999999999999999999999999999999999999999999988999
Q ss_pred HHHHHHhhhcCCCCcccccCCCccchhhhc-----ccc-ccCCCCCCCcc-hhhhHHH------hhcCCCchhhHHHHHh
Q 000845 616 QDLVNAHKETMGPETFGEHVSSKEDENEVK-----KVE-DEGHNNTSPAD-QLIKKEE------RETGDTGLKPYIDYLS 682 (1255)
Q Consensus 616 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~-~~~~~~~------~~~g~~~~~~~~~y~~ 682 (1255)
.++++.+.....++..++..+.. .....+ ... ........... ...++|+ .+....++....++.+
T Consensus 582 ~~lv~~Q~~~~~~~~~~~~~~~~-~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~s~~~i~k~~~ 660 (1228)
T KOG0055|consen 582 SSLVRLQELEKAAEDEEEEESLK-EERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPVSEEDEKVSFWRIFKLNK 660 (1228)
T ss_pred HHHHHHHhhhhhhhccccccchh-hhhhhccccccccccccCCccccccccccccccccccccccccccccHHHHHHhcc
Confidence 99997765433221100000000 000000 000 00000000000 0000000 0001222333333333
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----CCCC---CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 683 HKKGFLYFTLSTFAYLIFLVAQILQSLWIATYI-----PSTS---ISRLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEA 754 (1255)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (1255)
. .|.++++..++.++......+..+.+++.. ..+. .....|.++|++++++..+..++..+++.+.+.+.
T Consensus 661 p--e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~L 738 (1228)
T KOG0055|consen 661 P--EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKL 738 (1228)
T ss_pred c--hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 233333334444443333333333333221 2211 12345899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCcccccc--cccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000845 755 SESIFYKLMSSLFRAPMAFYDS--TPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPM 832 (1255)
Q Consensus 755 ~~~l~~~l~~~vl~~p~~~f~~--~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 832 (1255)
..++|..+|+++++++++|||. |. |.+.+|+.+|...+...+...+..+++++..+++++++.++++|.++++++.+
T Consensus 739 t~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~ 817 (1228)
T KOG0055|consen 739 TKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLAT 817 (1228)
T ss_pred HHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997 56 99999999999999999999999999999999999999999999999887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 833 IYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQR 912 (1255)
Q Consensus 833 ~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~ 912 (1255)
+++++.....+.+......+..............|++.+++||++|+.|++|.+.+.+.++...+...... .|-+..
T Consensus 818 ~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~---~i~gl~ 894 (1228)
T KOG0055|consen 818 FPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRG---LISGLG 894 (1228)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 77666655555555555555566666677788999999999999999999999999998888777655433 333333
Q ss_pred HHHHHHHHHHHHH---HH-HHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCccc
Q 000845 913 LETLSAIVLATSA---LC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPEL 988 (1255)
Q Consensus 913 l~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~ 988 (1255)
+.+-.+++....+ .+ ..+...+..++..+-..+.....-...+........++-+...|+.++.++++.++.-+..
T Consensus 895 f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~ 974 (1228)
T KOG0055|consen 895 FGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPD 974 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 3333333322222 22 2334456666555443333322223344445556667778889999999999876532211
Q ss_pred ccCCCCCCCCCCCceEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCE
Q 000845 989 VQKNSPAPDWPPTGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGL 1067 (1255)
Q Consensus 989 ~~~~~~~~~~p~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~ 1067 (1255)
. .......+.+|+|+|+||+|+||.. ..+||+|+||+|++||++||||||||||||++.+|.|+|+|++|.|.|||+
T Consensus 975 ~--~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~ 1052 (1228)
T KOG0055|consen 975 S--TSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGV 1052 (1228)
T ss_pred C--CCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCc
Confidence 1 1111112357999999999999632 236999999999999999999999999999999999999999999999999
Q ss_pred eCCCCChHHhhcccEEEccCCccCCCchhhhcccC-CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1068 DITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPL-SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1068 di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~-~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
||+++++++||++|++|.|||.||++||||||.++ .+.+++||.+ |++.++.|+||.++|+||||.|||+|.+
T Consensus 1053 dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~------Aak~ANaH~FI~sLP~GyDT~vGerG~Q 1126 (1228)
T KOG0055|consen 1053 DIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIE------AAKLANAHNFISSLPQGYDTRVGERGVQ 1126 (1228)
T ss_pred ccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHH------HHHHhhhHHHHhcCcCcccCccCcccCc
Confidence 99999999999999999999999999999999987 3479999998 9999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEc
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1226 (1255)
||||||||||||||++|||+|||||||||+||.++|+.+|++|++...++|+|+|||||+||++||.|.|+++|+|+|+|
T Consensus 1127 LSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~G 1206 (1228)
T KOG0055|consen 1127 LSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQG 1206 (1228)
T ss_pred CCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCChHHHHHHHHHH
Q 000845 1227 EPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1227 ~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
+|++|++ ++|.|++|++.+.
T Consensus 1207 tH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1207 THDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred cHHHHHh-CCCchHHHhhhcc
Confidence 9999999 5899999998764
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1e-131 Score=1314.98 Aligned_cols=1114 Identities=18% Similarity=0.197 Sum_probs=820.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 117 ILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTG 196 (1255)
Q Consensus 117 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1255)
+++..-+.+++.++++.++.++..++..+.|++++++++.+...+ ... .+++.++++.++..++...+.+...+++
T Consensus 50 ~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~-~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 125 (1466)
T PTZ00265 50 PFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGE-NVN---DIIFSLVLIGIFQFILSFISSFCMDVVT 125 (1466)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-hHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444556777888888999999999999999999999764221 111 1222233333333344444455666677
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHH
Q 000845 197 LKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGL-ATIATL 274 (1255)
Q Consensus 197 ~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~-~~l~g~ 274 (1255)
.++...+...+|++.++++....+....|++.|.++.|++.+...+. .+..+...++.+++++++++. +.| .+++.+
T Consensus 126 ~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~-~sw~Lalv~l 204 (1466)
T PTZ00265 126 TKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLF-KNARLTLCIT 204 (1466)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHH
Confidence 77777777888889998887777778889999999999999988653 455555566666666655554 455 677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 275 IVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYM 354 (1255)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 354 (1255)
+++++++.+..++.+++.+..++..+..++..+.+.|.+++||+||.|+.|+.+.++..+..+...+...+.....++..
T Consensus 205 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~ 284 (1466)
T PTZ00265 205 CVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHI 284 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788788888889999888888888889999999999999999999999999999987654444443333333333322
Q ss_pred HHHHH--HHHHHHHHHHHHHHHhCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000845 355 VLFWS--SPILIGAATLLTCYFLGI--------PLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEA 424 (1255)
Q Consensus 355 ~~~~~--~~~~~~~~~f~~~~~~~~--------~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~ 424 (1255)
.+... .-..+.+++||.+.+..+ .++++.+++.+....+...++..+.+.+..+..+.+|++||.+.++.
T Consensus 285 ~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~ 364 (1466)
T PTZ00265 285 GMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINR 364 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22111 122344567777766543 57888888776544444455566666789999999999999999987
Q ss_pred CCCCCcchhcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC--
Q 000845 425 PELQNSDMQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG-- 502 (1255)
Q Consensus 425 ~e~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G-- 502 (1255)
++..+......... ....|+++|++|+|+.+++.++|+|+||+|++||+++|+||+|||||||+++|+|.++|.+|
T Consensus 365 ~~~~~~~~~~~~~~--~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I 442 (1466)
T PTZ00265 365 KPLVENNDDGKKLK--DIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDI 442 (1466)
T ss_pred CCCCCCCCCCccCC--CCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeE
Confidence 54322111111101 12369999999999865555899999999999999999999999999999999999999888
Q ss_pred -----------------------------------------cc-------------------------------------
Q 000845 503 -----------------------------------------MD------------------------------------- 504 (1255)
Q Consensus 503 -----------------------------------------~D------------------------------------- 504 (1255)
..
T Consensus 443 ~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1466)
T PTZ00265 443 IINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDL 522 (1466)
T ss_pred EEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchh
Confidence 00
Q ss_pred ---------------------------------------cCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 505 ---------------------------------------LKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 505 ---------------------------------------i~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
+..+|+|++|.+|++|.+|||||||||+||||++++|+|+|
T Consensus 523 ~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILl 602 (1466)
T PTZ00265 523 NDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILI 602 (1466)
T ss_pred hhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 01468888999999999999999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCC--------------------------
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLPAFDSILLISGG-------------------------- 597 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~~aD~Iivl~~G-------------------------- 597 (1255)
|||||||||+++++.+ ++.+..+. +|+|+|+|||+++.+..||+|++|++|
T Consensus 603 LDEpTSaLD~~se~~i-~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~ 681 (1466)
T PTZ00265 603 LDEATSSLDNKSEYLV-QKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKN 681 (1466)
T ss_pred EeCcccccCHHHHHHH-HHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccccccccccccc
Confidence 9999999999998776 45666554 489999999999999999999999886
Q ss_pred ---------------------EEEEecChhHHhh-cchHHHHHHHHhhhcCCCC-----ccccc-CCCc--cch-----h
Q 000845 598 ---------------------EIIQAATYDHLLV-TSQEFQDLVNAHKETMGPE-----TFGEH-VSSK--EDE-----N 642 (1255)
Q Consensus 598 ---------------------~i~~~G~~~el~~-~~~~~~~l~~~~~~~~~~~-----~~~~~-~~~~--~~~-----~ 642 (1255)
+|+++|+|+||++ ..+.|..+++.+....... +.... .... ... .
T Consensus 682 ~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (1466)
T PTZ00265 682 NKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERGYDPD 761 (1466)
T ss_pred ccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccccccccccccccc
Confidence 5999999999997 6888988886543221110 00000 0000 000 0
Q ss_pred hhccc--cc-cC-C-CC-CCC--c--chhhhH------HHh--hcCCC--chhhHHHHHhcccchHHHHHHHHHHHHHHH
Q 000845 643 EVKKV--ED-EG-H-NN-TSP--A--DQLIKK------EER--ETGDT--GLKPYIDYLSHKKGFLYFTLSTFAYLIFLV 702 (1255)
Q Consensus 643 ~~~~~--~~-~~-~-~~-~~~--~--~~~~~~------~~~--~~g~~--~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 702 (1255)
+.... .. .. . .. ... . .....+ ++. ..... .+..+++++.......+ +.+++.++..+
T Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 839 (1466)
T PTZ00265 762 EMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVT--IIALSILVAGG 839 (1466)
T ss_pred cccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 00000 00 00 0 00 000 0 000000 000 00001 12233444432222211 22223333334
Q ss_pred HHHHHHHHHhhhcC----CC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q 000845 703 AQILQSLWIATYIP----ST--SISRLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDS 776 (1255)
Q Consensus 703 ~~~~~~~~l~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~ 776 (1255)
+..+.++.++.+++ .. ......+.+++++++++..++.+++.++..+.+.++..++|.++|++++++|++||++
T Consensus 840 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~ 919 (1466)
T PTZ00265 840 LYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQ 919 (1466)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC
Confidence 44444444443221 11 1112356677777888888889999999999999999999999999999999999986
Q ss_pred --cccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Q 000845 777 --TPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFAT--AKELMR 852 (1255)
Q Consensus 777 --~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~r~l~~ 852 (1255)
+++|++++|+++|++.+...+...+..++..++.+++.++++++++|.++++++|+++++..+.....+. .++.++
T Consensus 920 ~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1466)
T PTZ00265 920 DKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLTANKDVEK 999 (1466)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999999999999999999999999998877666544433222111111 111111
Q ss_pred H-------------HHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 853 I-------------NGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAI 919 (1255)
Q Consensus 853 ~-------------~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~ 919 (1255)
. +.+..+.+.+.+.|++.|++|||+|+.|+++.+++.+..+...+..........++....+.+..+
T Consensus 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1466)
T PTZ00265 1000 KEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLF 1079 (1466)
T ss_pred hhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 223355678899999999999999999999999999988887776655444443333333333333
Q ss_pred HHHHHHHH-HHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCC-CCC
Q 000845 920 VLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSP-APD 997 (1255)
Q Consensus 920 ~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~-~~~ 997 (1255)
..+++.++ ..++..|.++.|.+..++.+.+.....+..+...+..+.....+.+|+.++++.+++.+........ +..
T Consensus 1080 ~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~ 1159 (1466)
T PTZ00265 1080 INSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNK 1159 (1466)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccC
Confidence 22222222 3344567888887666555544344456667778888999999999999999865432211111110 001
Q ss_pred CCCCceEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-------------------
Q 000845 998 WPPTGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP------------------- 1057 (1255)
Q Consensus 998 ~p~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~------------------- 1057 (1255)
.+..|.|+|+||+|+|+.. ..+||+|+||+|+|||+|||||+||||||||+++|+|+|+|
T Consensus 1160 ~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~ 1239 (1466)
T PTZ00265 1160 NDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNE 1239 (1466)
T ss_pred CCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccc
Confidence 2245789999999999742 24699999999999999999999999999999999999999
Q ss_pred -----------------------------------CCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccC
Q 000845 1058 -----------------------------------TGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPL 1102 (1255)
Q Consensus 1058 -----------------------------------~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~ 1102 (1255)
++|+|+|||+||+++++++||++|+||||||+||+|||||||.++
T Consensus 1240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g 1319 (1466)
T PTZ00265 1240 QDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFG 1319 (1466)
T ss_pred cccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcC
Confidence 699999999999999999999999999999999999999999987
Q ss_pred C-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHH
Q 000845 1103 S-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNAT 1181 (1255)
Q Consensus 1103 ~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~t 1181 (1255)
. +++|+|+++ |++.+++++||.++|+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||++|
T Consensus 1320 ~~~at~eeI~~------A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~s 1393 (1466)
T PTZ00265 1320 KEDATREDVKR------ACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNS 1393 (1466)
T ss_pred CCCCCHHHHHH------HHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHH
Confidence 4 589999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc--CCcEEEEeccCchhhhhcCEEEEEeC----CEEE-EEcChhHHhhcCChHHHHHHHHH
Q 000845 1182 DSILQNTIRREF--ANCTVITVAHRIATVMDCNMVLSMSD----GKLV-EYDEPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1182 e~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~----G~iv-e~G~~~eLl~~~~~~f~~l~~~~ 1246 (1255)
|+.|+++|++.. +++|+|+||||++++++||+|+||++ |+++ |.|+|+||+++.+|.|++|++.+
T Consensus 1394 E~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1394 EKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred HHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 999999999874 68999999999999999999999999 9955 99999999985589999999764
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-94 Score=843.42 Aligned_cols=562 Identities=23% Similarity=0.359 Sum_probs=484.3
Q ss_pred hhhHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcC------CCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 674 LKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIP------STSISRLKLVIVYSGIGIGMMFLLLTRSFLV 747 (1255)
Q Consensus 674 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (1255)
++..+.|.+...++ +...+++.++.....++.|+++...++ +........+.+..++.++.+++.+++.+++
T Consensus 135 ~~rl~~l~~~~~~~--l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~ 212 (716)
T KOG0058|consen 135 LKRLLGLLKPEWKW--LVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLL 212 (716)
T ss_pred HHHHHHHhchhHHH--HHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666544333 223344445555566677766543222 1111223456677788888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000845 748 VYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLL 827 (1255)
Q Consensus 748 ~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 827 (1255)
.+.+.++..++|..+|++++++.++|||.+.+|++++|++.|...+...++..+...+.+.+..++.+++|++.+|.+++
T Consensus 213 ~~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltl 292 (716)
T KOG0058|consen 213 QYAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTL 292 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 828 VIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTARE 907 (1255)
Q Consensus 828 ~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1255)
+.+..+++...+.++|.+..|++.+...++.+..+....|.+.+++|||+|+.|+...+++.+.+++..+..........
T Consensus 293 v~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~ 372 (716)
T KOG0058|consen 293 VTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYG 372 (716)
T ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999988888876665543333222
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCc
Q 000845 908 WLIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAP 986 (1255)
Q Consensus 908 wl~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~ 986 (1255)
.+....++........+..+ ..++..|.++.|.+...+.|...+...+..+...+.++-+...|.+|+.++++.++.-+
T Consensus 373 ~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~ 452 (716)
T KOG0058|consen 373 IFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIP 452 (716)
T ss_pred HhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCC
Confidence 22222333333322222222 34556788999999999999999999999999999999999999999999998765533
Q ss_pred ccccCCCCCCCCCCCceEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEc
Q 000845 987 ELVQKNSPAPDWPPTGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIID 1065 (1255)
Q Consensus 987 ~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~id 1065 (1255)
.. ....+. ..+|.|+|+||+|+||.. ..+||+|+||+|+|||.||+||||||||||++++|+|||+|++|+|.+|
T Consensus 453 ~~---G~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllD 528 (716)
T KOG0058|consen 453 LT---GTLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLD 528 (716)
T ss_pred CC---Cccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEEC
Confidence 21 111222 468999999999999643 3469999999999999999999999999999999999999999999999
Q ss_pred CEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCC
Q 000845 1066 GLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDG 1144 (1255)
Q Consensus 1066 G~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G 1144 (1255)
|+||++++.+.||++||+|.|||+||+|||+|||.++. ..+||||.+ |++.++.++||.++|+||||.|||+|
T Consensus 529 G~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~------AAk~ANah~FI~~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 529 GVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEA------AAKMANAHEFITNFPDGYNTVVGEKG 602 (716)
T ss_pred CeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHH------HHHHhChHHHHHhCccccccccCCcc
Confidence 99999999999999999999999999999999998654 589999988 99999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEE
Q 000845 1145 ANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1145 ~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive 1224 (1255)
.+|||||||||||||||+|||+|||||||||+||.++|..||++|.+..+++|||+|||||+||+.+|+|+|+++|+|+|
T Consensus 603 ~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E 682 (716)
T KOG0058|consen 603 SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVE 682 (716)
T ss_pred ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcChhHHhhcCChHHHHHHHHHH
Q 000845 1225 YDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1225 ~G~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
.|+|+||+++++|.|++|++++.
T Consensus 683 ~G~h~eLl~~~~gly~~Lv~~q~ 705 (716)
T KOG0058|consen 683 MGTHDELLSKPNGLYAKLVQRQL 705 (716)
T ss_pred cccHHHHhhCcccHHHHHHHHhc
Confidence 99999999998899999999874
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4e-86 Score=810.02 Aligned_cols=544 Identities=26% Similarity=0.367 Sum_probs=492.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCC----CCCChhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 692 LSTFAYLIFLVAQILQSLWIATYIPS----TSISRLKL-VIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSL 766 (1255)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~v 766 (1255)
-+++..++..++.++.|++..+.+|. ...+...+ .+.+++.++...++.+++.+++...+.+....+-.++++++
T Consensus 158 ~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hl 237 (709)
T COG2274 158 EVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHL 237 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 44555666777778888887766654 33333333 34455667778899999999999999999999999999999
Q ss_pred hcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 767 FRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFAT 846 (1255)
Q Consensus 767 l~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 846 (1255)
++.|++||+++++|++++|+ +|++.|...+.......+..++..++.+++|++++|.++++.+..++++..+...+.+.
T Consensus 238 l~Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~ 316 (709)
T COG2274 238 LRLPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPL 316 (709)
T ss_pred HcCcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 57888888888888888888888999999999999999999999888888888888888
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 847 AKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSAL 926 (1255)
Q Consensus 847 ~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 926 (1255)
.|+..+...+..+..++++.|++.|+.|||+.+.|+++..++.+..+++.+..+.......|......++..+....+.+
T Consensus 317 l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~iL~ 396 (709)
T COG2274 317 LRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLILW 396 (709)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888999999999999999999999999999999999999999999999998888888888888887776665555
Q ss_pred H-HHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEE
Q 000845 927 C-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVE 1005 (1255)
Q Consensus 927 ~-~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~ 1005 (1255)
+ +..+..+.++.|.+-.+.+....+..++..+++.|.++.....+.+|+.++++.|+|.+.. ..+...|+..|+|+
T Consensus 397 ~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~---~~~~~~~~~~g~I~ 473 (709)
T COG2274 397 FGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGD---KTLIHLPKLQGEIE 473 (709)
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc---cccccccccCceEE
Confidence 4 3456678899999999999999999999999999999999999999999999998885432 11334456789999
Q ss_pred EEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEc
Q 000845 1006 IYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIP 1085 (1255)
Q Consensus 1006 ~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vp 1085 (1255)
|+||+|+|+++.|++|+|+|++|+|||+|||||+||||||||+|+|.|+|+|++|+|++||+|+++++++++|++|+|||
T Consensus 474 ~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~ 553 (709)
T COG2274 474 FENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVL 553 (709)
T ss_pred EEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEc
Confidence 99999999988889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCchhhhcccCCC-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccC
Q 000845 1086 QDPTLFSGSVRYNLDPLSQ-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRR 1164 (1255)
Q Consensus 1086 Qdp~Lf~gTIr~Nl~~~~~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~ 1164 (1255)
||++||+|||||||...+. .++||+++ |++.+++++||.++|.||||+|||+|.||||||||||+||||++++
T Consensus 554 Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~------A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~ 627 (709)
T COG2274 554 QDPFLFSGSIRENIALGNPEATDEEIIE------AAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSK 627 (709)
T ss_pred ccchhhcCcHHHHHhcCCCCCCHHHHHH------HHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccC
Confidence 9999999999999997664 67899999 9999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHH
Q 000845 1165 RQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1165 ~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~ 1244 (1255)
|+||||||||||||++||+.|.+.|.+..++||+|+||||++++++||||+|||+|+|+|+|+|+||++. +|.|+++++
T Consensus 628 P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~ 706 (709)
T COG2274 628 PKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQ 706 (709)
T ss_pred CCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997 899999987
Q ss_pred HH
Q 000845 1245 EY 1246 (1255)
Q Consensus 1245 ~~ 1246 (1255)
++
T Consensus 707 ~q 708 (709)
T COG2274 707 QQ 708 (709)
T ss_pred cc
Confidence 64
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.2e-80 Score=773.60 Aligned_cols=544 Identities=26% Similarity=0.419 Sum_probs=457.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCC---CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000845 692 LSTFAYLIFLVAQILQSLWIATYIPSTS---ISRLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFR 768 (1255)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~ 768 (1255)
..+++.++..+.....++++.+..+... .....+...++++.++..++.++..+...+.+.+...++|.++++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~ 97 (567)
T COG1132 18 LAILLLLLSALLSLLLPLLIGRIIDALLADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLR 97 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344445556666666666664443322 1123344445555556677777777778888899999999999999999
Q ss_pred CCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 769 APMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAK 848 (1255)
Q Consensus 769 ~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r 848 (1255)
.|+++|++++.|++++|+++|++.++..+......+...++.+++.+++++..+|.++++++...+++.....++.+..+
T Consensus 98 ~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~ 177 (567)
T COG1132 98 LPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSR 177 (567)
T ss_pred CCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888666666788889999999999999988877777777666667776668
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000845 849 ELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALC- 927 (1255)
Q Consensus 849 ~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~- 927 (1255)
...+...+..+.+.+.+.|+++|+++||+|+.++...+++.+..+...+..........++......+..+.......+
T Consensus 178 ~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (567)
T COG1132 178 KLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALG 257 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999999999999999999999999887777777666665554433333333333333333322222222
Q ss_pred HHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEE
Q 000845 928 TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIY 1007 (1255)
Q Consensus 928 ~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~ 1007 (1255)
......+.++.|.+...+.+...+..++..+...+..+.....+.+|+.++++.+++.... .. +.++..|.|+|+
T Consensus 258 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~---~~--~~~~~~~~I~f~ 332 (567)
T COG1132 258 GFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDP---PD--PLKDTIGSIEFE 332 (567)
T ss_pred HHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC---CC--CCCCCCCeEEEE
Confidence 2234456688999999999999999999999999999999999999999999875542211 11 123456889999
Q ss_pred EEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccC
Q 000845 1008 DLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQD 1087 (1255)
Q Consensus 1008 nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQd 1087 (1255)
||+|+|++ .+++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.|||+||++++.++||++|++||||
T Consensus 333 ~vsf~y~~-~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd 411 (567)
T COG1132 333 NVSFSYPG-KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQD 411 (567)
T ss_pred EEEEEcCC-CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEccc
Confidence 99999975 35699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCchhhhcccCCC-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCC
Q 000845 1088 PTLFSGSVRYNLDPLSQ-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQ 1166 (1255)
Q Consensus 1088 p~Lf~gTIr~Nl~~~~~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ 1166 (1255)
|+||+|||++||+++.+ ++|||+++ |++.++++|++.++|+||||.|||+|.+||||||||||||||++|+|+
T Consensus 412 ~~LF~~TI~~NI~~g~~~at~eei~~------a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ 485 (567)
T COG1132 412 PLLFSGTIRENIALGRPDATDEEIEE------ALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPP 485 (567)
T ss_pred ceeecccHHHHHhcCCCCCCHHHHHH------HHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999998865 89999999 999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHH
Q 000845 1167 ILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1167 ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~ 1246 (1255)
|||||||||+||++||+.|++++++..+++|+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|++|++.+
T Consensus 486 ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~ 564 (567)
T COG1132 486 ILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQ 564 (567)
T ss_pred EEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHh
Confidence 99999999999999999999999988889999999999999999999999999999999999999997 89999999987
Q ss_pred HH
Q 000845 1247 WS 1248 (1255)
Q Consensus 1247 ~~ 1248 (1255)
+.
T Consensus 565 ~~ 566 (567)
T COG1132 565 GG 566 (567)
T ss_pred hc
Confidence 53
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.1e-80 Score=772.60 Aligned_cols=558 Identities=20% Similarity=0.236 Sum_probs=451.3
Q ss_pred hhHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-----CCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 675 KPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS-----TSIS-RLKLVIVYSGIGIGMMFLLLTRSFLVV 748 (1255)
Q Consensus 675 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1255)
+.+++|++..++.++ +.+++.++..++....++.+.+..+. .... ...++.+++++.++..++.+++.++..
T Consensus 11 ~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 11 RWLKQQSKPAKRWLN--LSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred HHHHHHhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556655443332 33334445555566666666544331 1111 122334455555667777888888889
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000845 749 YLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLV 828 (1255)
Q Consensus 749 ~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 828 (1255)
..+.+...+++.++++++++.|.+||++.++|++++|+++|++.++..+...+..++..++.+++.++++++++|.++++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 168 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLI 168 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999899999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 829 IVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREW 908 (1255)
Q Consensus 829 ~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 908 (1255)
++.++++.+++...+.+..++..+...+..+.+.+.+.|.++|+++||+|++|+++.+++.+..++..+..........+
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK11174 169 LLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFL 248 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776776666777777777777777888899999999999999999999999999999988888777766554444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcccHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHh
Q 000845 909 LIQRLETLSAIVLATSALCTTLLHKGHKGAGYT---------GMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYM 979 (1255)
Q Consensus 909 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~ 979 (1255)
.......+..+...++.++......+.++.|.+ -.++.+...+..++..+...+..+.....+.+|+.+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 328 (588)
T PRK11174 249 SSAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFL 328 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444333333332222211111111244444432 12224445667778888888888999999999999999
Q ss_pred cCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCC
Q 000845 980 RIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTG 1059 (1255)
Q Consensus 980 ~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~ 1059 (1255)
+.+++.+.. ... +...+..+.|+|+||+|.|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+| |++
T Consensus 329 ~~~~~~~~~--~~~-~~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 329 ETPLAHPQQ--GEK-ELASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred cCCCcccCC--Ccc-ccCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 876543211 110 1111234679999999988654 56999999999999999999999999999999999999 999
Q ss_pred CEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccc
Q 000845 1060 GKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDS 1138 (1255)
Q Consensus 1060 G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt 1138 (1255)
|+|.+||+|+++++.+++|++|+||||||+||+|||||||.++. +++|+|+++ |++.+++++++.++|+||||
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~------al~~a~l~~~i~~lp~G~dT 477 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQ------ALENAWVSEFLPLLPQGLDT 477 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHH------HHHHhCHHHHHHhccccccc
Confidence 99999999999999999999999999999999999999999874 589999998 99999999999999999999
Q ss_pred hhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEe
Q 000845 1139 LVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMS 1218 (1255)
Q Consensus 1139 ~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~ 1218 (1255)
.+||+|.+|||||||||+||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||+
T Consensus 478 ~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~ 557 (588)
T PRK11174 478 PIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQ 557 (588)
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred CCEEEEEcChhHHhhcCChHHHHHHHHH
Q 000845 1219 DGKLVEYDEPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1219 ~G~ive~G~~~eLl~~~~~~f~~l~~~~ 1246 (1255)
+|+|+|.|+|+||+++ +|.|+++++.+
T Consensus 558 ~G~i~e~G~~~eL~~~-~~~y~~l~~~q 584 (588)
T PRK11174 558 DGQIVQQGDYAELSQA-GGLFATLLAHR 584 (588)
T ss_pred CCeEeecCCHHHHHhc-chHHHHHHHHh
Confidence 9999999999999986 78999998764
No 13
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.2e-78 Score=771.26 Aligned_cols=555 Identities=23% Similarity=0.319 Sum_probs=465.9
Q ss_pred hhhHHHH-HhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCCCh-hHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 674 LKPYIDY-LSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS----TSISR-LKLVIVYSGIGIGMMFLLLTRSFLV 747 (1255)
Q Consensus 674 ~~~~~~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (1255)
++.++++ ++..++. +...+++.++..++.++.++.+....+. ...+. ..+.+.++++.++..++.+++.++.
T Consensus 123 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (686)
T TIGR03797 123 LRDLLRFALRGARRD--LLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAV 200 (686)
T ss_pred HHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455554 3433222 2233444555556666666666544432 22222 2233445555666778888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000845 748 VYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLL 827 (1255)
Q Consensus 748 ~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 827 (1255)
...+.+...+++.++++++++.|+.||++.++|++++|++ |++.+...+...+...+..++.+++.++++++++|.+++
T Consensus 201 ~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 279 (686)
T TIGR03797 201 LRLETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLAL 279 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997 788888888887777777777777888889999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 828 VIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTARE 907 (1255)
Q Consensus 828 ~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1255)
+++.++++++.+..++.+..+...+...+..+...+++.|+++|+.+||+|+.|+++.+++.+..++..+..+.......
T Consensus 280 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (686)
T TIGR03797 280 VAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIEN 359 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666666666666666666677777788899999999999999999999999999999999988888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCc
Q 000845 908 WLIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAP 986 (1255)
Q Consensus 908 wl~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~ 986 (1255)
|.......+..+...++.++ ..+...|.++.|.+..+..+...+..++..+...+..+.....+.+|+.++++.++|.+
T Consensus 360 ~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 439 (686)
T TIGR03797 360 LLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVD 439 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 76665555544433333222 33445788999998888889899999999999999999999999999999998766532
Q ss_pred ccccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcC
Q 000845 987 ELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDG 1066 (1255)
Q Consensus 987 ~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG 1066 (1255)
.. .. ...+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||
T Consensus 440 ~~---~~--~~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg 514 (686)
T TIGR03797 440 EA---KT--DPGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDG 514 (686)
T ss_pred cC---cC--CCCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECC
Confidence 11 11 11123578999999999976667899999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1067 LDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1067 ~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
+|+++++.+++|++|+||||||++|+|||||||.++.+.+|+++++ |++.+++++++.++|+|+||.+||+|.+
T Consensus 515 ~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~------al~~a~l~~~i~~lp~G~dt~ige~G~~ 588 (686)
T TIGR03797 515 QDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWE------AARMAGLAEDIRAMPMGMHTVISEGGGT 588 (686)
T ss_pred EEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHH------HHHHcCcHHHHHhccccccccccCCCCC
Confidence 9999999999999999999999999999999999876789999998 9999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEc
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1226 (1255)
|||||||||+||||++++|+|||||||||+||++||+.|++.|++. ++|+|+||||++++..||+|+||++|+|+|.|
T Consensus 589 LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G 666 (686)
T TIGR03797 589 LSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQG 666 (686)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEEC
Confidence 9999999999999999999999999999999999999999999886 68999999999999999999999999999999
Q ss_pred ChhHHhhcCChHHHHHHHH
Q 000845 1227 EPKKLLRRQDSLFAQLVKE 1245 (1255)
Q Consensus 1227 ~~~eLl~~~~~~f~~l~~~ 1245 (1255)
+|+||+++ +|.|++|+++
T Consensus 667 ~~~~Ll~~-~~~y~~l~~~ 684 (686)
T TIGR03797 667 TYDELMAR-EGLFAQLARR 684 (686)
T ss_pred CHHHHHhC-CcHHHHHHHh
Confidence 99999986 7999999875
No 14
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6.9e-79 Score=771.87 Aligned_cols=551 Identities=22% Similarity=0.309 Sum_probs=460.0
Q ss_pred hHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 676 PYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS----TSISR-LKLVIVYSGIGIGMMFLLLTRSFLVVYL 750 (1255)
Q Consensus 676 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1255)
.+++|++.... .+...+++.++..+..++.+++....++. ..... ...+++++++.++..++.+++.+++.+.
T Consensus 151 ~l~~~~~~~~~--~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 228 (711)
T TIGR00958 151 RLLGLSGRDWP--WLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYT 228 (711)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455543322 22334445556666777777776644432 12111 2234445555666778888888999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000845 751 GLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIV 830 (1255)
Q Consensus 751 ~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 830 (1255)
+.+...++|.+++++++++|++||+++++|++++|+++|++.++..+...+..++..++.+++.+++++..+|.++++++
T Consensus 229 ~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l 308 (711)
T TIGR00958 229 MARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTL 308 (711)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Q 000845 831 PMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAR---E 907 (1255)
Q Consensus 831 ~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 907 (1255)
..+++.+++...+.+..++..+...+..+...+++.|+++|+++||+|+.|+++.+++.+..++..+......... .
T Consensus 309 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (711)
T TIGR00958 309 INLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYL 388 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777788888888888888888888899999999999999999999999999999888887766554433222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcc
Q 000845 908 WLIQRLETLSAIVLATSALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPE 987 (1255)
Q Consensus 908 wl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~ 987 (1255)
|....+..+..+++ ..........|.++.|.+..++.|...+...+..+...+..+.....+.+|+.++++.+++.+.
T Consensus 389 ~~~~~~~~~~~~~i--l~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 466 (711)
T TIGR00958 389 WTTSVLGMLIQVLV--LYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPL 466 (711)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 32222222222111 1122233457889999999999999999999999999999999999999999999987654322
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcC
Q 000845 988 LVQKNSPAPDWPPTGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDG 1066 (1255)
Q Consensus 988 ~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG 1066 (1255)
. .....++..|.|+|+||+|+|+.. .+++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||
T Consensus 467 ~----~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg 542 (711)
T TIGR00958 467 T----GTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDG 542 (711)
T ss_pred C----CCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECC
Confidence 1 111123456789999999999743 35799999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHhhcccEEEccCCccCCCchhhhcccC-CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCC
Q 000845 1067 LDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPL-SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1067 ~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~-~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
+|+++++.+++|++|+||||||++|+|||||||.+. .+.+|+++++ +++.++++++++++|+|+||.+||+|.
T Consensus 543 ~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~------al~~a~l~~~i~~lp~GldT~ige~G~ 616 (711)
T TIGR00958 543 VPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMA------AAKAANAHDFIMEFPNGYDTEVGEKGS 616 (711)
T ss_pred EEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHH------HHHHcCCHHHHHhCCCccCCcccCCCC
Confidence 999999999999999999999999999999999865 3578999998 999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1225 (1255)
+||||||||||||||++++|+|||||||||+||+++|+.|++ ....+++|+|+||||++++..||+|+||++|+|+|.
T Consensus 617 ~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~ 694 (711)
T TIGR00958 617 QLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEM 694 (711)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999999 334578999999999999999999999999999999
Q ss_pred cChhHHhhcCChHHHHHH
Q 000845 1226 DEPKKLLRRQDSLFAQLV 1243 (1255)
Q Consensus 1226 G~~~eLl~~~~~~f~~l~ 1243 (1255)
|+|+||+++ +|.|++|+
T Consensus 695 Gt~~eL~~~-~~~y~~lv 711 (711)
T TIGR00958 695 GTHKQLMED-QGCYKHLV 711 (711)
T ss_pred eCHHHHHhC-CCchHhcC
Confidence 999999986 78998874
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.1e-78 Score=768.65 Aligned_cols=558 Identities=21% Similarity=0.294 Sum_probs=467.5
Q ss_pred hhhHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCCCh-hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 674 LKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS----TSISR-LKLVIVYSGIGIGMMFLLLTRSFLVV 748 (1255)
Q Consensus 674 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1255)
++.++.+++..++... ..+++.++..++.++.+++.....+. ...+. ..+++.++++.++..++.+++.++..
T Consensus 142 ~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (710)
T TIGR03796 142 LRALWRRLRGSRGALL--YLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLR 219 (710)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555654333222 23333445555556666666644432 22221 22334445555667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000845 749 YLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLV 828 (1255)
Q Consensus 749 ~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 828 (1255)
..+.+...+++.++++++++.|++||++.++|++++|++.| +.+...+...+..++..++.+++.++++++++|+++++
T Consensus 220 ~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 298 (710)
T TIGR03796 220 RLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLI 298 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 56787788888888888888899999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 829 IVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREW 908 (1255)
Q Consensus 829 ~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 908 (1255)
++.++++++++..++.+..++..+......+...+++.|+++|+.+||+++.|+.+.+++.+..++..+..........|
T Consensus 299 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (710)
T TIGR03796 299 GIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQI 378 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777777777777777777777888889999999999999999999999999999998888887777666666666
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcc
Q 000845 909 LIQRLETLSAIVLATSAL-CTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPE 987 (1255)
Q Consensus 909 l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~ 987 (1255)
.......+..+...++.+ .+.....|.++.|.+..+..+...+..++..+...+..+.....+.+|+.++++.++|.+.
T Consensus 379 ~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 458 (710)
T TIGR03796 379 LGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLL 458 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 655555554443333222 2334557889999999999999999999999999999999999999999999987766432
Q ss_pred cccC--C-CCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEE
Q 000845 988 LVQK--N-SPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIII 1064 (1255)
Q Consensus 988 ~~~~--~-~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~i 1064 (1255)
.... . .....++..|.|+|+||+|+|+++.+++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|.+
T Consensus 459 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~i 538 (710)
T TIGR03796 459 EEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILF 538 (710)
T ss_pred ccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 1100 0 011113346789999999999876677999999999999999999999999999999999999999999999
Q ss_pred cCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCC
Q 000845 1065 DGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQD 1143 (1255)
Q Consensus 1065 dG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~ 1143 (1255)
||+|+++++.+++|++|+||||||++|+|||||||.+++ +.+|+++++ |++.+++++++.++|+|+||.++|+
T Consensus 539 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~------al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 539 DGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVR------ACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred CCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHH------HHHHhCCHHHHHhCcCcccceeccC
Confidence 999999999999999999999999999999999998765 589999998 9999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEE
Q 000845 1144 GANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLV 1223 (1255)
Q Consensus 1144 G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~iv 1223 (1255)
|.+|||||||||+||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++..||||+||++|+|+
T Consensus 613 G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~ 690 (710)
T TIGR03796 613 GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVV 690 (710)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999999987 589999999999999999999999999999
Q ss_pred EEcChhHHhhcCChHHHHHH
Q 000845 1224 EYDEPKKLLRRQDSLFAQLV 1243 (1255)
Q Consensus 1224 e~G~~~eLl~~~~~~f~~l~ 1243 (1255)
|.|+|+||+++ ++.|++|+
T Consensus 691 ~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 691 QRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred EecCHHHHHHc-CCcHHHHh
Confidence 99999999986 78999987
No 16
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-79 Score=754.39 Aligned_cols=513 Identities=23% Similarity=0.331 Sum_probs=434.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHH
Q 000845 723 LKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKST 802 (1255)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~ 802 (1255)
..+.+.|+.++++..+..++...++.+.+.|...++|.+.++++++++++|||.+..|++..|+++|++.+++.+...+.
T Consensus 71 ~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg 150 (1228)
T KOG0055|consen 71 SKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVG 150 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHH
Confidence 45677888888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHH
Q 000845 803 IAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEE 882 (1255)
Q Consensus 803 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~ 882 (1255)
.++..+..+++.+++.++..|.++++++++.++.......+.+..-.....+..+.+...+...|++.+++|+.+|+.|+
T Consensus 151 ~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~ 230 (1228)
T KOG0055|consen 151 NFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEK 230 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcH
Confidence 99999999999999999999999999999888888877778877777777888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH-HHhccCcccHHHHHHHHHHHHHHHHHHHHH
Q 000845 883 RFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLA---TSALCT-TLLHKGHKGAGYTGMALSFGLSLNDFLVYS 958 (1255)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~ 958 (1255)
+..+++.+.++...+...... .|.+........++.. ...++. .++..+..++|.+...+...+.-...+...
T Consensus 231 ~e~~ry~~~L~~~~k~gi~~g---~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa 307 (1228)
T KOG0055|consen 231 KEIERYSKALENALKFGIKKG---LFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQA 307 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhcc
Confidence 999999998888777654332 2222222222122111 122222 222334444444433333333333344444
Q ss_pred HHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCC-CceeeeeeEEEeCCcEEEEE
Q 000845 959 VNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNA-PLVLRGITCTFEGGHKIGVV 1037 (1255)
Q Consensus 959 ~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~-~~vL~~is~~I~~Ge~vaIv 1037 (1255)
......+.+...|..++.+.++..+.......... ..-...|.|+|+||+|+||... .++|+|+||+|++||.||||
T Consensus 308 ~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~--~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valV 385 (1228)
T KOG0055|consen 308 SPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGR--VLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALV 385 (1228)
T ss_pred ccchHHHhccccchHHHHHHhcCCCCCCcccccCC--cccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEE
Confidence 44555666778889999998875443221111111 1112479999999999996432 36999999999999999999
Q ss_pred cCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCc
Q 000845 1038 GRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIP 1116 (1255)
Q Consensus 1038 G~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~ 1116 (1255)
|+|||||||++++|.|+|+|++|+|+|||.|+++++.++||++||+|.|+|+||++||+|||.++. ++|++|+.+
T Consensus 386 G~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~---- 461 (1228)
T KOG0055|consen 386 GPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEE---- 461 (1228)
T ss_pred CCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHH----
Confidence 999999999999999999999999999999999999999999999999999999999999999776 589999998
Q ss_pred hhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCc
Q 000845 1117 SQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANC 1196 (1255)
Q Consensus 1117 ~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~ 1196 (1255)
|++.++.++||.++|+||||.+||+|.+||||||||+||||||+|+|+|||||||||+||+++|+.||++|++..+|+
T Consensus 462 --a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~gr 539 (1228)
T KOG0055|consen 462 --AAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGR 539 (1228)
T ss_pred --HHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHHH
Q 000845 1197 TVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1197 TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
|.|+|||||+||+++|+|+||++|+|||.|+|+||++++ |.|++|++.+.
T Consensus 540 TTivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q~ 589 (1228)
T KOG0055|consen 540 TTIVVAHRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQE 589 (1228)
T ss_pred eEEEEeeehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHHh
Confidence 999999999999999999999999999999999999985 99999998773
No 17
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.4e-77 Score=748.37 Aligned_cols=543 Identities=23% Similarity=0.367 Sum_probs=450.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCC----CCCChhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 693 STFAYLIFLVAQILQSLWIATYIPS----TSISRLK---LVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSS 765 (1255)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 765 (1255)
.+++.++..++.++.++++.+.++. ....... ++++++++.++..++.+++.++....+.+...+++.+++++
T Consensus 28 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 107 (592)
T PRK10790 28 AVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDA 107 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455566666667766654432 1111111 12234444455666777888888899999999999999999
Q ss_pred HhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 766 LFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFA 845 (1255)
Q Consensus 766 vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 845 (1255)
+++.|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++.+|+++++++..+++.+.+...+.+
T Consensus 108 l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~ 187 (592)
T PRK10790 108 ALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQR 187 (592)
T ss_pred HHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887665555554445555555
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000845 846 TAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWL-IQRLETLSAIVLATS 924 (1255)
Q Consensus 846 ~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl-~~~l~~~~~~~~~~~ 924 (1255)
..+...+......+...+++.|+++|+.+||+|+.++++.+++.+..++..+..+.......+. ......+..+...++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (592)
T PRK10790 188 YSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGL 267 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666778888999999999999999999999999999887777666555443333322 222222222221111
Q ss_pred HHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceE
Q 000845 925 ALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKV 1004 (1255)
Q Consensus 925 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I 1004 (1255)
.+.......|.++.|.+..++.+...+..++..+...+..++....+.+|+.++++.++++... . ..++..+.|
T Consensus 268 ~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~---~---~~~~~~~~i 341 (592)
T PRK10790 268 LMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN---D---DRPLQSGRI 341 (592)
T ss_pred HHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC---C---ccCCCCCeE
Confidence 1111123467889999999999999999999999999999999999999999998765442211 1 112345789
Q ss_pred EEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEE
Q 000845 1005 EIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGII 1084 (1255)
Q Consensus 1005 ~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~v 1084 (1255)
+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||.|+++++.+.+|++|+||
T Consensus 342 ~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v 420 (592)
T PRK10790 342 DIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMV 420 (592)
T ss_pred EEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999743 5699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccC
Q 000845 1085 PQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRR 1164 (1255)
Q Consensus 1085 pQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~ 1164 (1255)
||||.+|+||||+||.++++++|+++++ +++++|++++++++|+||||.++|+|.+|||||||||+||||++++
T Consensus 421 ~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~------a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~ 494 (592)
T PRK10790 421 QQDPVVLADTFLANVTLGRDISEEQVWQ------ALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQT 494 (592)
T ss_pred ccCCccccchHHHHHHhCCCCCHHHHHH------HHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999888889999998 9999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHH
Q 000845 1165 RQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1165 ~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~ 1244 (1255)
|+|||||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|+||+++ ++.|+++++
T Consensus 495 ~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~y~~l~~ 573 (592)
T PRK10790 495 PQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGRYWQMYQ 573 (592)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCHHHHHHH
Confidence 9999999999999999999999999998889999999999999999999999999999999999999987 799999998
Q ss_pred HHHHh
Q 000845 1245 EYWSH 1249 (1255)
Q Consensus 1245 ~~~~~ 1249 (1255)
.+.++
T Consensus 574 ~~~~~ 578 (592)
T PRK10790 574 LQLAG 578 (592)
T ss_pred HHhhh
Confidence 76443
No 18
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.1e-77 Score=765.43 Aligned_cols=556 Identities=23% Similarity=0.301 Sum_probs=460.8
Q ss_pred hhhHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCCChh-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 674 LKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS----TSISRL-KLVIVYSGIGIGMMFLLLTRSFLVV 748 (1255)
Q Consensus 674 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1255)
++.++.+++..+..+ ...+++.++..++.++.++++....+. ...... .+...++++.++..++.+++.++..
T Consensus 144 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (708)
T TIGR01193 144 LLKFIPLITRQKKLI--VNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLN 221 (708)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666665443332 233444455566666777777655442 111111 2233344455566778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000845 749 YLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLV 828 (1255)
Q Consensus 749 ~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 828 (1255)
..+.+...+++.++++++++.|+.||+++++|++++|++ |.+.+...+...+...+..++.+++.++++++.+|.++++
T Consensus 222 ~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 300 (708)
T TIGR01193 222 VLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLL 300 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999999999999998 8888777777776676777777777888888999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 829 IVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREW 908 (1255)
Q Consensus 829 ~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 908 (1255)
++..+++++++...+.+..++..+...+..+...+.+.|+++|+.+||+|+.|+++.+++.+..+...+..+.......+
T Consensus 301 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (708)
T TIGR01193 301 SLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQG 380 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777888888888888888999999999999999999999999999999988888777666655444433
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcc
Q 000845 909 LIQRLETLSAIVLATS-ALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPE 987 (1255)
Q Consensus 909 l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~ 987 (1255)
.......+..+...++ .+...+...|.++.|.+..+..+...+..++..+...+..+.....+++|+.++++.++|.+.
T Consensus 381 ~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 460 (708)
T TIGR01193 381 QQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFIN 460 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 3333333322222222 222334457889999999999999999999999999999999999999999999988766432
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCE
Q 000845 988 LVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGL 1067 (1255)
Q Consensus 988 ~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~ 1067 (1255)
.. .....++..|.|+|+||+|+|++ .+++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|++||+
T Consensus 461 ~~---~~~~~~~~~~~I~~~~vsf~y~~-~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~ 536 (708)
T TIGR01193 461 KK---KRTELNNLNGDIVINDVSYSYGY-GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGF 536 (708)
T ss_pred cc---cccCCCCCCCcEEEEEEEEEcCC-CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCE
Confidence 11 11122345678999999999964 357999999999999999999999999999999999999999999999999
Q ss_pred eCCCCChHHhhcccEEEccCCccCCCchhhhcccC--CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCC
Q 000845 1068 DITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPL--SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1068 di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~--~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
|+++++.+++|++|+||||||+||+|||||||.++ .+++|+++++ +++.+++++++.++|+||||.++|+|.
T Consensus 537 ~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~------a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 537 SLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWA------ACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHH------HHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99999999999999999999999999999999976 3588999998 999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1225 (1255)
+|||||||||+||||++++|+|||||||||+||++||+.+++.|++. +++|+|+||||++++..||+|+||++|+++|.
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~ 689 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQ 689 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999874 78999999999999999999999999999999
Q ss_pred cChhHHhhcCChHHHHHHH
Q 000845 1226 DEPKKLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1226 G~~~eLl~~~~~~f~~l~~ 1244 (1255)
|+|+||+++ +|.|++|++
T Consensus 690 G~~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 690 GSHDELLDR-NGFYASLIH 707 (708)
T ss_pred CCHHHHHhc-CCcHHHHhh
Confidence 999999986 789999875
No 19
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-77 Score=676.09 Aligned_cols=501 Identities=19% Similarity=0.297 Sum_probs=440.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHH
Q 000845 731 GIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMA 810 (1255)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~ 810 (1255)
+++++..+..+...+......+++-..+|.++|+++...+..-..+...|+++||+..|++.+|+.+-..+...+..++.
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~ 145 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVL 145 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHH
Confidence 56677777888888888899999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHH
Q 000845 811 VISTFVVLGALTWQVLLVIV-PMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNL 889 (1255)
Q Consensus 811 ~i~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~ 889 (1255)
.++..+.+.+++|.+++.+. .++.+.+.+...+.+..+...+.-...++.+.+++.|.+.|....+.||.++++.+.+.
T Consensus 146 ~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~ 225 (573)
T COG4987 146 IAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALE 225 (573)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHH
Confidence 88888888899999886544 45555677888888888999888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhh
Q 000845 890 DLIDAYASSFFHSFTAREWLIQRLETLSAIVLA-TSALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSV-NNQCIVGN 967 (1255)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~-~~~~~~~~ 967 (1255)
...+.+.+..........|....+.++.++.+. ...+.......|..+...+.+++..++.....+..+. ..+.++..
T Consensus 226 ~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq 305 (573)
T COG4987 226 ATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQ 305 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhH
Confidence 999999999988888999988888888777665 3334443344455554334444444344444455455 56688889
Q ss_pred hhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCc-eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHH
Q 000845 968 LIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTG-KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTT 1046 (1255)
Q Consensus 968 ~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g-~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKST 1046 (1255)
...|..|+.+..+.++|.... .. ..|..+ .++++||+|+|+.+.+++|+|+||++++||||||+|||||||||
T Consensus 306 ~~~Sa~Rl~~i~~q~~e~~~~---~~---~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKST 379 (573)
T COG4987 306 VIASARRLNDILDQKPEVTFP---DE---QTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKST 379 (573)
T ss_pred HHHHHHHHhhhccCCcccCCC---cc---ccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHH
Confidence 999999999988766554321 01 111222 79999999999988889999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccH
Q 000845 1047 LISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQL 1125 (1255)
Q Consensus 1047 Ll~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l 1125 (1255)
++++|.|.++|++|+|.++|.|++.++.+++|+.|++++|.++||+||+|+||...+ ++||||+|+ ++++++|
T Consensus 380 llqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~------aL~qvgL 453 (573)
T COG4987 380 LLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWA------ALQQVGL 453 (573)
T ss_pred HHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHH------HHHHcCH
Confidence 999999999999999999999999999999999999999999999999999998654 589999999 9999999
Q ss_pred HHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCc
Q 000845 1126 REVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRI 1205 (1255)
Q Consensus 1126 ~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl 1205 (1255)
++++.+.|+||+|++||+|.+|||||||||+|||+||++.+++||||||.+||++||+.|.+.|.+..+|+|+|+||||+
T Consensus 454 ~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL 533 (573)
T COG4987 454 EKLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRL 533 (573)
T ss_pred HHHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHH
Q 000845 1206 ATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1206 ~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~ 1244 (1255)
..+..||||+|||+|+++|+|+|.+|+++ +|.|+++++
T Consensus 534 ~~le~~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q 571 (573)
T COG4987 534 RGLERMDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQ 571 (573)
T ss_pred ccHhhcCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhc
Confidence 99999999999999999999999999995 899999875
No 20
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.9e-77 Score=737.65 Aligned_cols=556 Identities=19% Similarity=0.261 Sum_probs=451.5
Q ss_pred hHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCC---ChhH--HHHHHHHHHHHHHHHHHHHHHH
Q 000845 676 PYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS----TSI---SRLK--LVIVYSGIGIGMMFLLLTRSFL 746 (1255)
Q Consensus 676 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~ 746 (1255)
.+++|++..++.+. +.+++.++..++.+..++.+.|.++. ... .... .+..+.++.++..++.++..+.
T Consensus 6 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (574)
T PRK11160 6 PFLKLYKRHWFMLS--LGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLV 83 (574)
T ss_pred HHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556554333322 33344445555566666666665432 110 0111 1223334555667777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000845 747 VVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVL 826 (1255)
Q Consensus 747 ~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 826 (1255)
....+.+...++|.++++++++.|+.+|++.++|++++|+++|++.++..+...+..++..++.+++.++++++++|.++
T Consensus 84 ~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 84 SHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 827 LVIVPMIYLI-IVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTA 905 (1255)
Q Consensus 827 ~~~~~~~~~~-~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (1255)
++++..+++. +.+..++.+..+...+...+..+.+.+.+.|+++|+++||+|+.|+++.+++.+..++..+........
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8765444433 334566666667777777888899999999999999999999999999999999988888777766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCC
Q 000845 906 REWLIQRLETLSAIVLATSALCTTLLHKGHKGAGYTGMALSFG-LSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSE 984 (1255)
Q Consensus 906 ~~wl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~-~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e 984 (1255)
..+.......+..+...++..+......+..+.|.+..++.|. ......+..+...+..+.....+.+|+.++++.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~ 323 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPE 323 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5555555555544433333222222235666777665555554 333456666667778888889999999999987654
Q ss_pred CcccccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEE
Q 000845 985 APELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIII 1064 (1255)
Q Consensus 985 ~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~i 1064 (1255)
.+.. ...+ ..+..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+
T Consensus 324 ~~~~--~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i 399 (574)
T PRK11160 324 VTFP--TTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILL 399 (574)
T ss_pred CCCC--cccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 3211 0111 11345789999999999765457999999999999999999999999999999999999999999999
Q ss_pred cCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCC
Q 000845 1065 DGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQD 1143 (1255)
Q Consensus 1065 dG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~ 1143 (1255)
||+|+++++.+++|++|+||||||++|+|||||||.... +.+|+++++ +++.+++++++.+ |+||||.+||+
T Consensus 400 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~------al~~~~l~~~i~~-p~GldT~vge~ 472 (574)
T PRK11160 400 NGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIE------VLQQVGLEKLLED-DKGLNAWLGEG 472 (574)
T ss_pred CCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHH------HHHHcCCHHHHcC-ccccCchhcCC
Confidence 999999999999999999999999999999999998754 579999998 9999999999999 99999999999
Q ss_pred CCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEE
Q 000845 1144 GANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLV 1223 (1255)
Q Consensus 1144 G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~iv 1223 (1255)
|.+||||||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++..||+|++|++|+++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~ 552 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQII 552 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEE
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred EEcChhHHhhcCChHHHHHHHH
Q 000845 1224 EYDEPKKLLRRQDSLFAQLVKE 1245 (1255)
Q Consensus 1224 e~G~~~eLl~~~~~~f~~l~~~ 1245 (1255)
|.|+|+||+++ +|.|++|++.
T Consensus 553 ~~g~~~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 553 EQGTHQELLAQ-QGRYYQLKQR 573 (574)
T ss_pred EeCCHHHHHhc-CcHHHHHHhh
Confidence 99999999986 8999999863
No 21
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-76 Score=681.92 Aligned_cols=512 Identities=21% Similarity=0.297 Sum_probs=444.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHH
Q 000845 722 RLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKS 801 (1255)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~ 801 (1255)
...+++.++++.++..++.+.+.......+.++...+|.++++++.+.++.+-...|+|++...++.-++.++.++...+
T Consensus 39 l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryL 118 (559)
T COG4988 39 LLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYL 118 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 34455666677777888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHh
Q 000845 802 TIAVGTTMAVISTFVVLGALTWQVLLVI---VPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAF 878 (1255)
Q Consensus 802 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf 878 (1255)
+.++.+.+..+..++.+++.+|.-++++ .|+++++++ .....++...+....+...+.++|.|.++|+.|+|+|
T Consensus 119 Pq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMi---lvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f 195 (559)
T COG4988 119 PQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMI---LVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAF 195 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHh
Confidence 9999999999999999999999876654 455555443 3344555666667778888999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc-CcccHHHHHHHHHHHHHHHHHHH
Q 000845 879 QNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALCTTLL-HK-GHKGAGYTGMALSFGLSLNDFLV 956 (1255)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~g~~l~~~~~~~~~l~ 956 (1255)
+..+...++..+...++.+..+.....+.--+..++++.++.++.++++..+. .. |.++....-+++..+.-+..++.
T Consensus 196 ~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR 275 (559)
T COG4988 196 GRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLR 275 (559)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999988888888877777778888888888777766665432 22 45555444455666667777777
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEE
Q 000845 957 YSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGV 1036 (1255)
Q Consensus 957 ~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaI 1036 (1255)
.+-..+....+...+.+.+..+.+.|.+.+... ......|.....|+.+|++|+|+.+. ++++|+||+++||+++||
T Consensus 276 ~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~--~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~tal 352 (559)
T COG4988 276 DLGSFFHAAAAGEAAADKLFTLLESPVATPGSG--EKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTAL 352 (559)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCc--cccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEEEE
Confidence 777777777777888999999988766543221 11122232334566679999998654 799999999999999999
Q ss_pred EcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCC-CChHHHHhccC
Q 000845 1037 VGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQ-FTDQEIWEVTI 1115 (1255)
Q Consensus 1037 vG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~-~sd~ei~~~~~ 1115 (1255)
||+||||||||+++|+|+++|++|+|.+||+|.++++.+.+|+++++|||+|++|+|||||||.+++. .+|+++++
T Consensus 353 vG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~--- 429 (559)
T COG4988 353 VGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIA--- 429 (559)
T ss_pred ECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHH---
Confidence 99999999999999999999999999999999999999999999999999999999999999998765 88999998
Q ss_pred chhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCC
Q 000845 1116 PSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFAN 1195 (1255)
Q Consensus 1116 ~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~ 1195 (1255)
+++++++.++++. |+||||++||+|.+|||||+||+++|||++++++++++|||||+||.|||+.|++.|.+.+++
T Consensus 430 ---al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ 505 (559)
T COG4988 430 ---ALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQ 505 (559)
T ss_pred ---HHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhC
Confidence 9999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHHH
Q 000845 1196 CTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1196 ~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
+|||+||||++.+.++|+|+|||+|+++|.|+|++|.++ +|.|++|++++.
T Consensus 506 ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q~ 556 (559)
T COG4988 506 KTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQE 556 (559)
T ss_pred CeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHHh
Confidence 999999999999999999999999999999999999986 899999998864
No 22
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.1e-76 Score=742.32 Aligned_cols=507 Identities=21% Similarity=0.316 Sum_probs=449.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHH
Q 000845 729 YSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTT 808 (1255)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~ 808 (1255)
++++.++..++.+++.++....+.+....++.++++++++.|..+|++.+.|++++|+++|++.+...+...+..++..+
T Consensus 71 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~ 150 (582)
T PRK11176 71 VIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREG 150 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455666777788888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHH
Q 000845 809 MAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKN 888 (1255)
Q Consensus 809 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~ 888 (1255)
+.+++.++++++.+|+++++++..+++.+++..++.+..++..+......+.+.+++.|.++|+.+||+|+.++.+.+++
T Consensus 151 ~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~ 230 (582)
T PRK11176 151 ASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRF 230 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHH
Confidence 99999999999999999887777777766777777777777777777888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000845 889 LDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGN 967 (1255)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~ 967 (1255)
.+..+...+..........|.....+.+..+...++..+ ......|.++.|.+.+++++...+..++..+...+..+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~ 310 (582)
T PRK11176 231 DKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQR 310 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888877776666666666666554433332222 3334568899999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHH
Q 000845 968 LIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTL 1047 (1255)
Q Consensus 968 ~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTL 1047 (1255)
...+.+|+.++++.+++.+.. . ....|..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||
T Consensus 311 ~~~~~~ri~~~~~~~~~~~~~---~--~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTL 385 (582)
T PRK11176 311 GMAACQTLFAILDLEQEKDEG---K--RVIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTI 385 (582)
T ss_pred HHHHHHHHHHHhcCCCcCCCC---C--cCCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHH
Confidence 999999999998876543211 1 11123456899999999997665779999999999999999999999999999
Q ss_pred HHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCC--CCChHHHHhccCchhHHHhccH
Q 000845 1048 ISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS--QFTDQEIWEVTIPSQVLEKCQL 1125 (1255)
Q Consensus 1048 l~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~--~~sd~ei~~~~~~~~al~~~~l 1125 (1255)
+++|+|+++|++|+|.+||+|+++++.+++|++|+||||||++|+|||||||.... .++|+++++ +++.+++
T Consensus 386 l~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~------al~~~~l 459 (582)
T PRK11176 386 ANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEE------AARMAYA 459 (582)
T ss_pred HHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHH------HHHHhCc
Confidence 99999999999999999999999999999999999999999999999999998643 479999998 9999999
Q ss_pred HHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCc
Q 000845 1126 REVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRI 1205 (1255)
Q Consensus 1126 ~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl 1205 (1255)
+++++++|+||||.+||+|.+|||||||||+||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||+
T Consensus 460 ~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~ 539 (582)
T PRK11176 460 MDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRL 539 (582)
T ss_pred HHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred hhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHHH
Q 000845 1206 ATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1206 ~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
+++..||+|++|++|+|+|.|+|++|+++ ++.|++|++++-
T Consensus 540 ~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~-~~~y~~l~~~~~ 580 (582)
T PRK11176 540 STIEKADEILVVEDGEIVERGTHAELLAQ-NGVYAQLHKMQF 580 (582)
T ss_pred HHHHhCCEEEEEECCEEEEeCCHHHHHhC-CChHHHHHHHHh
Confidence 99999999999999999999999999986 689999998653
No 23
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-79 Score=668.35 Aligned_cols=534 Identities=22% Similarity=0.337 Sum_probs=428.6
Q ss_pred HHHHHHHHHHHHHhhhcC---CCCCChhHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000845 699 IFLVAQILQSLWIATYIP---STSISRLKLVIVYSGIGI------GMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRA 769 (1255)
Q Consensus 699 ~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~ 769 (1255)
+..+.....+.+.+|..+ .+..........|+.+.+ ++.++..+|+++......-..+.+-.++|+|+.+.
T Consensus 226 i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~L 305 (790)
T KOG0056|consen 226 IGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHLHNL 305 (790)
T ss_pred HHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhh
Confidence 334444555555555443 233333334445554443 33567778888888899999999999999999999
Q ss_pred CcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHH----HHHHH
Q 000845 770 PMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVV-LGALTWQVLLVIVPMIYLIIVL----QNYYF 844 (1255)
Q Consensus 770 p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~i----~~~~~ 844 (1255)
++.|+-...+|+++.-+.+..+.+. .+.....+..-.+.-+.++++- ....+||+.+++..+..++..+ ..+--
T Consensus 306 SlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRT 384 (790)
T KOG0056|consen 306 SLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRT 384 (790)
T ss_pred ceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhH
Confidence 9999999999999888877766665 3444444444444444443333 2346888887776666665443 33333
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 845 ATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATS 924 (1255)
Q Consensus 845 ~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~ 924 (1255)
+..|++...+.+++ ..-.+++-+.+|+|-|+.|+...+++.+.++++++..+.....-..+...-+.+.++.....
T Consensus 385 k~rR~Mn~~~nesr----Ar~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~g 460 (790)
T KOG0056|consen 385 KARRKMNNSWNESR----ARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAG 460 (790)
T ss_pred HHHHHhhhhhhhhh----hhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhh
Confidence 33444444444443 45678999999999999999999999999999998876655444333333333222222222
Q ss_pred -HHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCce
Q 000845 925 -ALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGK 1003 (1255)
Q Consensus 925 -~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~ 1003 (1255)
.+.++.+..+..+.|...+..+|.+++..+++++-..+..++++..-+|++.++++.++|..+ .+..++-.-.+|.
T Consensus 461 sll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd---~P~a~pl~~~~G~ 537 (790)
T KOG0056|consen 461 SLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVD---LPGAPPLKVTQGK 537 (790)
T ss_pred hheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhc---CCCCCCccccCCe
Confidence 222233446678889999999999999999999999999999999999999999976655332 2222222235799
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+|+||+|.|.|+. |||+||||+++||+.||+|||||+||||++++|+|+++.++|+|.|||+||+++..++||++||+
T Consensus 538 i~fsnvtF~Y~p~k-~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGV 616 (790)
T KOG0056|consen 538 IEFSNVTFAYDPGK-PVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGV 616 (790)
T ss_pred EEEEEeEEecCCCC-ceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCc
Confidence 99999999998765 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHc
Q 000845 1084 IPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVL 1162 (1255)
Q Consensus 1084 vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL 1162 (1255)
||||.+||++||..||.+.. .++|||+.+ |++.+++||-|.++|+||+|.|||+|-.||||||||+||||++|
T Consensus 617 VPQDtvLFNdTI~yNIryak~~Asneevya------AAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiL 690 (790)
T KOG0056|consen 617 VPQDTVLFNDTILYNIRYAKPSASNEEVYA------AAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTIL 690 (790)
T ss_pred ccCcceeecceeeeheeecCCCCChHHHHH------HHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHh
Confidence 99999999999999999765 589999998 99999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHH
Q 000845 1163 RRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQL 1242 (1255)
Q Consensus 1163 ~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l 1242 (1255)
|+|.|++||||||+||..||+.||.++.+..+++|.|+||||++||.++|.|+|+++|+|+|.|+|+||+++++|.|++|
T Consensus 691 K~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~M 770 (790)
T KOG0056|consen 691 KAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADM 770 (790)
T ss_pred cCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 000845 1243 VKEYW 1247 (1255)
Q Consensus 1243 ~~~~~ 1247 (1255)
|+.++
T Consensus 771 Wq~qq 775 (790)
T KOG0056|consen 771 WQAQQ 775 (790)
T ss_pred HHHHH
Confidence 96553
No 24
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.1e-76 Score=750.27 Aligned_cols=548 Identities=23% Similarity=0.295 Sum_probs=457.2
Q ss_pred hhhHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCCChh-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 674 LKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS----TSISRL-KLVIVYSGIGIGMMFLLLTRSFLVV 748 (1255)
Q Consensus 674 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1255)
++.++.+++..++.+ ...+++.++..++.++.++.+....+. ...+.. .+.++++++.++..++.+++.++..
T Consensus 135 ~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (694)
T TIGR03375 135 KHWFWSTLKESWPLY--RDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLD 212 (694)
T ss_pred chHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555554333322 233344455556666677766654432 111222 2223344445566778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000845 749 YLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLV 828 (1255)
Q Consensus 749 ~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 828 (1255)
+.+.+...+++.++++++++.|+.| ++.++|++++|+ +|++.+...+...+...+..++.+++.++++++++|+++++
T Consensus 213 ~~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 213 VAGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999998 788999999999 79999999988887777777777888888889999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 829 IVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREW 908 (1255)
Q Consensus 829 ~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 908 (1255)
++..+++++.+..++.+..++..+...+..+...+++.|+++|+.+||+|+.|+.+.+++.+..++..+..+.......+
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777777778888888999999999999999999999999999999998888887777666555555
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcc
Q 000845 909 LIQRLETLSAIVLATS-ALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPE 987 (1255)
Q Consensus 909 l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~ 987 (1255)
.......+..+...++ .+.+..+..|.++.|.+..++.+...+..++..+...+..+.....+.+|+.++++.++|.+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 5444444443322222 222334456889999999999999999999999999999999999999999999988765332
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCE
Q 000845 988 LVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGL 1067 (1255)
Q Consensus 988 ~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~ 1067 (1255)
. .......+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+
T Consensus 451 ~---~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~ 527 (694)
T TIGR03375 451 G---TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGV 527 (694)
T ss_pred C---CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 1 1111112345789999999999766667999999999999999999999999999999999999999999999999
Q ss_pred eCCCCChHHhhcccEEEccCCccCCCchhhhcccCCC-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1068 DITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQ-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1068 di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
|+++++.+++|++|+||||||++|+|||||||.+..+ ++|+++++ +++.+++++++.++|+||||.+||+|.+
T Consensus 528 ~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~------a~~~~~l~~~i~~lp~gl~T~i~e~G~~ 601 (694)
T TIGR03375 528 DIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILR------AAELAGVTEFVRRHPDGLDMQIGERGRS 601 (694)
T ss_pred EhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHH------HHHHcChHHHHHhCcccccceecCCCCC
Confidence 9999999999999999999999999999999997754 89999998 9999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEc
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1226 (1255)
|||||||||+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|+||++|+|+|.|
T Consensus 602 LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G 681 (694)
T TIGR03375 602 LSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADG 681 (694)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeC
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred ChhHHhhc
Q 000845 1227 EPKKLLRR 1234 (1255)
Q Consensus 1227 ~~~eLl~~ 1234 (1255)
+|+||+++
T Consensus 682 ~~~eLl~~ 689 (694)
T TIGR03375 682 PKDQVLEA 689 (694)
T ss_pred CHHHHHHH
Confidence 99999875
No 25
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.1e-75 Score=738.33 Aligned_cols=559 Identities=23% Similarity=0.318 Sum_probs=466.5
Q ss_pred hhhHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCCChh-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 674 LKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS----TSISRL-KLVIVYSGIGIGMMFLLLTRSFLVV 748 (1255)
Q Consensus 674 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1255)
++.++.+++..++.+. ..+++.++..++.++.++++....+. ...... .+.++++++.++..++.+++.++..
T Consensus 127 ~~~~~~~~~~~~~~~~--~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~ 204 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFR--EVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFA 204 (694)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555543332222 23334445555556667666654432 122222 2334445555667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000845 749 YLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLV 828 (1255)
Q Consensus 749 ~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 828 (1255)
..+.+...+++.++++++++.|+.||++.++|++++|+ +|++.+...+...+..++..++.+++.++++++++|.++++
T Consensus 205 ~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 283 (694)
T TIGR01846 205 HLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGV 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 69999999888777777777777777788899999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 829 IVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREW 908 (1255)
Q Consensus 829 ~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 908 (1255)
++..++++..+..++.+..++..+...+..+...+++.|+++|+.+||+||.|+.+.+++.+..++..+..+.......+
T Consensus 284 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR01846 284 VIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNI 363 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766666666666666666666666677788999999999999999999999999999999998888877776666666
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcc
Q 000845 909 LIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPE 987 (1255)
Q Consensus 909 l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~ 987 (1255)
.......+..+...++.++ ..+...|.++.|.+..+..+...+..++..+...+..+.....+.+|+.++++.++|...
T Consensus 364 ~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 443 (694)
T TIGR01846 364 AGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRS 443 (694)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccC
Confidence 6665555554433333222 334456889999998899999999999999999999999999999999999987765432
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCE
Q 000845 988 LVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGL 1067 (1255)
Q Consensus 988 ~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~ 1067 (1255)
. .....+ +..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+
T Consensus 444 ~--~~~~~~--~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~ 519 (694)
T TIGR01846 444 A--GLAALP--ELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGV 519 (694)
T ss_pred C--CCCCCC--CCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 1 111111 235789999999999876667999999999999999999999999999999999999999999999999
Q ss_pred eCCCCChHHhhcccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1068 DITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1068 di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
|+++++.+++|++|+||||||++|+|||||||.... +.+++++++ +++.+++++++.++|+||||.++++|.+
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~------a~~~~~l~~~i~~lp~gl~t~i~~~g~~ 593 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIH------AAKLAGAHDFISELPQGYNTEVGEKGAN 593 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHH------HHHHcChHHHHHhCcCccCcEecCCCCC
Confidence 999999999999999999999999999999998754 578999998 9999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEc
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1226 (1255)
||||||||++||||++++|+|||||||||+||+++++.+.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|
T Consensus 594 LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g 673 (694)
T TIGR01846 594 LSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESG 673 (694)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ChhHHhhcCChHHHHHHHHH
Q 000845 1227 EPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1227 ~~~eLl~~~~~~f~~l~~~~ 1246 (1255)
+|+||+++ +|.|++|++++
T Consensus 674 ~~~~l~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 674 RHEELLAL-QGLYARLWQQQ 692 (694)
T ss_pred CHHHHHHc-CChHHHHHHhh
Confidence 99999986 79999998753
No 26
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.2e-74 Score=723.33 Aligned_cols=542 Identities=23% Similarity=0.342 Sum_probs=471.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcC----CCCCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000845 693 STFAYLIFLVAQILQSLWIATYIP----STSISR-LKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLF 767 (1255)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl 767 (1255)
.+++.++..++....++++....+ ...... ..+..+++++.++..++.+++.++....+.+....++..++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~ 98 (571)
T TIGR02203 19 AGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLL 98 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444555555555665543322 111111 223335666667778888899999999999999999999999999
Q ss_pred cCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 768 RAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATA 847 (1255)
Q Consensus 768 ~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 847 (1255)
+.|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++.+|++++++++++++.+++..++.+..
T Consensus 99 ~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~ 178 (571)
T TIGR02203 99 GLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRL 178 (571)
T ss_pred cCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888888888888888888
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 848 KELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALC 927 (1255)
Q Consensus 848 r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 927 (1255)
++..+...+..+++.+.+.|+++|+.+||+++.++++.+++.+..+...+..........+.......+..+...+..++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (571)
T TIGR02203 179 RRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFI 258 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999999999999999999998888877777767666666665554433332222
Q ss_pred -HHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEE
Q 000845 928 -TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEI 1006 (1255)
Q Consensus 928 -~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~ 1006 (1255)
......|.+++|.+..+..+...+..++..+...+..+.....+.+|+.++++.+++.+.. ..+. .+..+.|++
T Consensus 259 g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~--~~~~~~i~~ 333 (571)
T TIGR02203 259 ALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG---TRAI--ERARGDVEF 333 (571)
T ss_pred HHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCC--CCCCCeEEE
Confidence 3344568899999999999999999999999999999999999999999999766553211 1111 123568999
Q ss_pred EEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEcc
Q 000845 1007 YDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQ 1086 (1255)
Q Consensus 1007 ~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQ 1086 (1255)
+||+|+|+++.+++|+|+||+|+|||+|+|+|+||||||||+++|+|+++|++|+|++||+|+++++.+++|++|+||||
T Consensus 334 ~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 413 (571)
T TIGR02203 334 RNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQ 413 (571)
T ss_pred EEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEcc
Confidence 99999997655679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCchhhhcccCC--CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccC
Q 000845 1087 DPTLFSGSVRYNLDPLS--QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRR 1164 (1255)
Q Consensus 1087 dp~Lf~gTIr~Nl~~~~--~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~ 1164 (1255)
+|++|+|||||||..+. +.+|+++++ +++.+++++++.++|+||||.++|+|.+||||||||||||||++++
T Consensus 414 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~------~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~ 487 (571)
T TIGR02203 414 DVVLFNDTIANNIAYGRTEQADRAEIER------ALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKD 487 (571)
T ss_pred CcccccccHHHHHhcCCCCCCCHHHHHH------HHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcC
Confidence 99999999999999764 589999998 9999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHH
Q 000845 1165 RQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1165 ~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~ 1244 (1255)
|+|||||||||+||++|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|+++ ++.|+++++
T Consensus 488 ~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~-~~~~~~~~~ 566 (571)
T TIGR02203 488 APILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR-NGLYAQLHN 566 (571)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-CCHHHHHHH
Confidence 9999999999999999999999999998889999999999999999999999999999999999999986 689999877
Q ss_pred HH
Q 000845 1245 EY 1246 (1255)
Q Consensus 1245 ~~ 1246 (1255)
.+
T Consensus 567 ~~ 568 (571)
T TIGR02203 567 MQ 568 (571)
T ss_pred Hh
Confidence 54
No 27
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=8.5e-74 Score=715.12 Aligned_cols=549 Identities=21% Similarity=0.282 Sum_probs=451.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000845 692 LSTFAYLIFLVAQILQSLWIATYIPSTS--ISRLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRA 769 (1255)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~ 769 (1255)
+.+++.++..++.+..++++.+..+.-. .....+++.++++.++..+..+....+......+...+++.++++++++.
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 102 (588)
T PRK13657 23 LLAVANVLLAAATFAEPILFGRIIDAISGKGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERIIQL 102 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444455566666677777765544211 11122233333334444444444455555566666667777999999999
Q ss_pred CcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 770 PMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKE 849 (1255)
Q Consensus 770 p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~ 849 (1255)
|..+|++.+.|++++|+++|++.+...+...+..++..++.+++.++++++.+|+++++++.++++++.+..++.+..++
T Consensus 103 ~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~ 182 (588)
T PRK13657 103 PLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRKTKD 182 (588)
T ss_pred CHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988887778888888888888888889999999888877777777788888888888
Q ss_pred HHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000845 850 LMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSAL-CT 928 (1255)
Q Consensus 850 l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~-~~ 928 (1255)
..+...+..+.+.+++.|+++|+.+||+|+.++.+.+++.+..++..+..........+.....+.+..+...++.+ ..
T Consensus 183 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 262 (588)
T PRK13657 183 GQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILVLGA 262 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999999999999999999999999988888877776655555555444444333333222222 23
Q ss_pred HHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEE
Q 000845 929 TLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYD 1008 (1255)
Q Consensus 929 ~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~n 1008 (1255)
.....|.++.|.+..++.+...+..++..+...+..+.....+.+|+.++.+.+++.+.. ....+. -+..+.|+|+|
T Consensus 263 ~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~--~~~~~~-~~~~~~I~~~~ 339 (588)
T PRK13657 263 ALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP--PGAIDL-GRVKGAVEFDD 339 (588)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC--CCCCCc-CCCCCeEEEEE
Confidence 345578899999998899988999999988888888888899999999987654432211 010011 12346799999
Q ss_pred EEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCC
Q 000845 1009 LQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDP 1088 (1255)
Q Consensus 1009 vs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp 1088 (1255)
|+|+|+++ +++|+|+||+++|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||||
T Consensus 340 vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~ 418 (588)
T PRK13657 340 VSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQDA 418 (588)
T ss_pred EEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEecCc
Confidence 99999743 56999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCe
Q 000845 1089 TLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQI 1167 (1255)
Q Consensus 1089 ~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~I 1167 (1255)
.+|+|||||||..+. +.+|+++++ +++.+++++++.++|+|+||.++++|.+|||||||||+||||++++|+|
T Consensus 419 ~lf~~Ti~~Ni~~~~~~~~d~~i~~------al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~i 492 (588)
T PRK13657 419 GLFNRSIEDNIRVGRPDATDEEMRA------AAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPI 492 (588)
T ss_pred ccccccHHHHHhcCCCCCCHHHHHH------HHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999998764 578999998 9999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHHH
Q 000845 1168 LVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1168 LiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
||||||||+||++|++.|.+.|++..+++|+|+||||++.++.||+|++|++|+++|.|+|++|+++ ++.|++++++++
T Consensus 493 liLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 493 LILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLRAQG 571 (588)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHHHhh
Confidence 9999999999999999999999988789999999999999999999999999999999999999986 799999998776
Q ss_pred Hhhh
Q 000845 1248 SHAE 1251 (1255)
Q Consensus 1248 ~~~~ 1251 (1255)
.+.|
T Consensus 572 ~~~~ 575 (588)
T PRK13657 572 MLQE 575 (588)
T ss_pred cccc
Confidence 5443
No 28
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.6e-74 Score=649.19 Aligned_cols=510 Identities=22% Similarity=0.311 Sum_probs=406.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHH
Q 000845 723 LKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKST 802 (1255)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~ 802 (1255)
...+..|.+..+++.++..++.+.+.+...++.+....+.|.+.+++.+++|.+..+|.+.+.+.+-...+...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 45677888899999999999999999999999999999999999999999999999999999988888888777777666
Q ss_pred HHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcH
Q 000845 803 IAVGTTMAVISTFVVLGA-LTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNE 881 (1255)
Q Consensus 803 ~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~ 881 (1255)
.++..++.+......+.+ ..+.++++++..+..|..+.....+.-.+.++.-..+.....+...|++.+-.+||+||.|
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE 233 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNE 233 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccH
Confidence 666666555554443333 3455554444444443322222222222333444455556677888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 882 ERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATS-ALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVN 960 (1255)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~ 960 (1255)
++..+++...+.++.+......+....+.+.-..+.+.....+ .....-...+.++.|.+.+..++..++..++..+-.
T Consensus 234 ~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~ 313 (591)
T KOG0057|consen 234 EYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGS 313 (591)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHH
Confidence 9999999998888877665544433332222222221111111 111111234567778888888888888888888877
Q ss_pred HHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCC
Q 000845 961 NQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRT 1040 (1255)
Q Consensus 961 ~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~s 1040 (1255)
.+.++...+.-++-+....+... .. ... +.+.-+..|.|+|+||+|.|.|+ +++|+++||+|++||||||||+|
T Consensus 314 vyr~~~q~l~Dm~~~~~l~~~~~--~i--~~~-~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekVaIvG~n 387 (591)
T KOG0057|consen 314 VYRELRQALTDMRTLFILLEVDE--DI--QEA-ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKVAIVGSN 387 (591)
T ss_pred HHHHHHHHHHhHHHHHhhhhhhh--hh--hhc-cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEEEEECCC
Confidence 77777766665554443322111 10 111 11112235789999999999864 46999999999999999999999
Q ss_pred CCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCchhH
Q 000845 1041 GSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQV 1119 (1255)
Q Consensus 1041 GsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~a 1119 (1255)
||||||++++|+||++ ++|+|+|||+||++++++.+|+.|||||||..||++||-+||.+++ ..++||+.+ +
T Consensus 388 GsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e------~ 460 (591)
T KOG0057|consen 388 GSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVE------A 460 (591)
T ss_pred CCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHH------H
Confidence 9999999999999999 9999999999999999999999999999999999999999998765 489999998 9
Q ss_pred HHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEE
Q 000845 1120 LEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVI 1199 (1255)
Q Consensus 1120 l~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI 1199 (1255)
+++++++|.+.++|+||+|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.+.....++|+|
T Consensus 461 ~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI 540 (591)
T KOG0057|consen 461 CKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVI 540 (591)
T ss_pred HHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHH
Q 000845 1200 TVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1200 ~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~ 1246 (1255)
+|+||++++++||+|+|||+|+|+|.|+|+||++ +.+.|+.+|.++
T Consensus 541 ~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 541 MIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQ 586 (591)
T ss_pred EEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccc
Confidence 9999999999999999999999999999999999 688998888754
No 29
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.9e-73 Score=704.33 Aligned_cols=504 Identities=20% Similarity=0.256 Sum_probs=412.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCC--CChhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000845 693 STFAYLIFLVAQILQSLWIATYIPSTS--ISRLKLVIV---YSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLF 767 (1255)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl 767 (1255)
.+++.++..++.++.++.+++.++... .....+... ++++.++..++.++..++....+.+...++|.+++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 97 (529)
T TIGR02868 18 AILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLA 97 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334445555666666666666544211 111111111 122344556677778888888999999999999999999
Q ss_pred cCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000845 768 RAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLII-VLQNYYFAT 846 (1255)
Q Consensus 768 ~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~ 846 (1255)
+.|..||++.++|++++|+++|++.++..+...+..++..++.+++.++++++.+|.++++++..++++. +...++.+.
T Consensus 98 ~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~ 177 (529)
T TIGR02868 98 RLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRA 177 (529)
T ss_pred ccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999887766554443 334455555
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 847 AKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSAL 926 (1255)
Q Consensus 847 ~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 926 (1255)
.++..+...+..+.+.+++.|+++|+++||+|+.|+.+.+++.+..++..+..........+.......+..+...++.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (529)
T TIGR02868 178 ARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGALW 257 (529)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666777889999999999999999999999999999998888877776655555444444333333333222222
Q ss_pred H-HHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEE
Q 000845 927 C-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVE 1005 (1255)
Q Consensus 927 ~-~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~ 1005 (1255)
+ ......|.++.|.+...+.+...+..++..+...+..+.....+.+|+.++++.+++.+... ...+...+|..+.|+
T Consensus 258 ~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~~~~~~~~~~~~I~ 336 (529)
T TIGR02868 258 AGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGV-VPAAGALGLGKPTLE 336 (529)
T ss_pred HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCC-CCCCcccCCCCceEE
Confidence 2 23345678899998888889889999999999999999999999999999998765432211 111111234457899
Q ss_pred EEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEc
Q 000845 1006 IYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIP 1085 (1255)
Q Consensus 1006 ~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vp 1085 (1255)
|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|++++ .+++|++|+|||
T Consensus 337 ~~~vsf~Y~~~-~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V~ 414 (529)
T TIGR02868 337 LRDLSFGYPGS-PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVFA 414 (529)
T ss_pred EEEEEEecCCC-CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEEc
Confidence 99999999754 4599999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccC
Q 000845 1086 QDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRR 1164 (1255)
Q Consensus 1086 Qdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~ 1164 (1255)
|||+||+|||||||.++. +.+|+++++ |++.+++++++.++|+||||.+||+|.+||||||||||||||++++
T Consensus 415 Q~~~lF~~TI~eNI~~g~~~~~~e~i~~------al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~ 488 (529)
T TIGR02868 415 QDAHLFDTTVRDNLRLGRPDATDEELWA------ALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLAD 488 (529)
T ss_pred cCcccccccHHHHHhccCCCCCHHHHHH------HHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcC
Confidence 999999999999999864 579999998 9999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCc
Q 000845 1165 RQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRI 1205 (1255)
Q Consensus 1165 ~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl 1205 (1255)
|+|||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 489 ~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 489 APILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999988999999999996
No 30
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=8.2e-73 Score=707.06 Aligned_cols=559 Identities=21% Similarity=0.328 Sum_probs=461.5
Q ss_pred hHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 676 PYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS----TSISR-LKLVIVYSGIGIGMMFLLLTRSFLVVYL 750 (1255)
Q Consensus 676 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1255)
.+++|++..+..+. +.+++.++..++.+..++.+....+. ..... ..++.+++++.++..++.+.+.++....
T Consensus 8 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 8 ALWPFVRPYRGRVL--AALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455543332222 23334445555555666655543332 11111 2223334444455566677888888899
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000845 751 GLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIV 830 (1255)
Q Consensus 751 ~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 830 (1255)
+.+....++..+++++++.|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++++|+++++++
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 165 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVL 165 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988888888889999999999999999999888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 831 PMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLI 910 (1255)
Q Consensus 831 ~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~ 910 (1255)
..+++.+.+..++.+..+...+..........+++.|.++|+++||+|+.++.+.+++.+..++..+..........|+.
T Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (576)
T TIGR02204 166 LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLT 245 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666777777777888888889999999999999999999999999999999988887777665555555555
Q ss_pred HHHHHHHHHHHHHH-HHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccc
Q 000845 911 QRLETLSAIVLATS-ALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELV 989 (1255)
Q Consensus 911 ~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~ 989 (1255)
.....+..+..+.. .+.......|.++.|.+..+..+...+..++..+...+..+.....+.+|+.++++.+++.+...
T Consensus 246 ~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 325 (576)
T TIGR02204 246 AIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPA 325 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC
Confidence 44444333222222 22233345688899999999999999999999999999999999999999999987655422111
Q ss_pred cCCCCCCCCCCCceEEEEEEEEEeCCCC-CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEe
Q 000845 990 QKNSPAPDWPPTGKVEIYDLQIRYRPNA-PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLD 1068 (1255)
Q Consensus 990 ~~~~~~~~~p~~g~I~~~nvs~~Y~~~~-~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~d 1068 (1255)
......+|..+.|+|+||+|+|+++. +++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+|
T Consensus 326 --~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~ 403 (576)
T TIGR02204 326 --HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVD 403 (576)
T ss_pred --CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEE
Confidence 11111233456899999999997533 579999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHhhcccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1069 ITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1069 i~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
+++++.+++|++|+|+||||++|+|||||||.++. +.+|+++++ +++++++.+++.++|+|+||.++|+|.+|
T Consensus 404 i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~------~l~~~~l~~~i~~l~~gl~t~i~~~g~~L 477 (576)
T TIGR02204 404 LRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEA------AARAAHAHEFISALPEGYDTYLGERGVTL 477 (576)
T ss_pred HHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHH------HHHHcCcHHHHHhCCCCCCceeCCCCCcC
Confidence 99999999999999999999999999999999754 478899998 99999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcC
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~ 1227 (1255)
||||||||+||||++++|+|||||||||+||++|++.+.+.+++..+++|+|+||||++.+..||+|++|++|+++|.|+
T Consensus 478 SgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~ 557 (576)
T TIGR02204 478 SGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGT 557 (576)
T ss_pred CHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeec
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhHHhhcCChHHHHHHHH
Q 000845 1228 PKKLLRRQDSLFAQLVKE 1245 (1255)
Q Consensus 1228 ~~eLl~~~~~~f~~l~~~ 1245 (1255)
|++|+++ ++.|++|++.
T Consensus 558 ~~~l~~~-~~~~~~l~~~ 574 (576)
T TIGR02204 558 HAELIAK-GGLYARLARL 574 (576)
T ss_pred HHHHHHc-CChHHHHHhh
Confidence 9999985 8899998864
No 31
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.6e-73 Score=702.17 Aligned_cols=511 Identities=19% Similarity=0.250 Sum_probs=432.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHH
Q 000845 726 VIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAV 805 (1255)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~ 805 (1255)
+++++++.++..++.++..++....+.+...++|.++++++++.|++||++.++|++++|+++|++.+.......+..++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~ 118 (569)
T PRK10789 39 IGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLV 118 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 34444455556667777777888889999999999999999999999999999999999999999999877777777777
Q ss_pred HHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHH
Q 000845 806 GTTMAVISTFVVL-GALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERF 884 (1255)
Q Consensus 806 ~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~ 884 (1255)
..++..++.++++ ++++|.++++++..+++++.+...+.+..++..+......+.+.+.+.|+++|+.+||+|+.++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~ 198 (569)
T PRK10789 119 DSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQ 198 (569)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHH
Confidence 7766666665555 578998888777666776677777777777667777778889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 885 FAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATS-ALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQC 963 (1255)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~ 963 (1255)
.+++.+..++..+..........+..........+...++ .+...+...|.++.|.+..++.+...+..++..+...+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~ 278 (569)
T PRK10789 199 SALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFN 278 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888887776665554444443333333222222211 222233456888999988888888889899988889999
Q ss_pred HHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCc
Q 000845 964 IVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSG 1043 (1255)
Q Consensus 964 ~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsG 1043 (1255)
.+.....+.+|+.++.+.+++.+. ...+.+ +..+.|+|+||+|+|+.+.+++|+|+||+|+|||++||||+||||
T Consensus 279 ~~~~~~~a~~ri~~ll~~~~~~~~---~~~~~~--~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsG 353 (569)
T PRK10789 279 IVERGSAAYSRIRAMLAEAPVVKD---GSEPVP--EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGSG 353 (569)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccC---CCCCCC--CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCCC
Confidence 999999999999999876544221 111111 234689999999999765567999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHh
Q 000845 1044 KTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEK 1122 (1255)
Q Consensus 1044 KSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~ 1122 (1255)
||||+++|+|+++|++|+|.+||+|+++++.+++|++++||||+|++|+|||||||.++. +.+|+++++ +++.
T Consensus 354 KSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~------~~~~ 427 (569)
T PRK10789 354 KSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEH------VARL 427 (569)
T ss_pred HHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHH------HHHH
Confidence 999999999999999999999999999999999999999999999999999999998763 578999998 9999
Q ss_pred ccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEec
Q 000845 1123 CQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVA 1202 (1255)
Q Consensus 1123 ~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~Ia 1202 (1255)
+++++++.++|+|+||.++++|.+||||||||++||||++++|+|||||||||+||+++++.+++.|++..+++|+|+||
T Consensus 428 ~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~it 507 (569)
T PRK10789 428 ASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISA 507 (569)
T ss_pred cCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred cCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHHHH
Q 000845 1203 HRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYWS 1248 (1255)
Q Consensus 1203 Hrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~~ 1248 (1255)
||++++..||+|++|++|+++|.|+|++|+++ ++.|+++++.+..
T Consensus 508 H~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 508 HRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred cchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 99999999999999999999999999999986 7899999986543
No 32
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2.8e-72 Score=697.18 Aligned_cols=543 Identities=21% Similarity=0.294 Sum_probs=443.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000845 692 LSTFAYLIFLVAQILQSLWIATYIPSTS--ISRLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRA 769 (1255)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~ 769 (1255)
..+++.++..++.++.++.+++.++.-. .....++++++++.++..+..++...+......+...+++.++++++++.
T Consensus 23 ~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~l 102 (585)
T TIGR01192 23 LIVIANITLAAITIAEPILFGRIIDAISSKSDVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATLLTEAFGRIISM 102 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3444455666666677777665544211 11112222222333333344444444555566666667778999999999
Q ss_pred CcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 770 PMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKE 849 (1255)
Q Consensus 770 p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~ 849 (1255)
|++||+++++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.++++++.+++++.++...+.+..++
T Consensus 103 ~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~ 182 (585)
T TIGR01192 103 PLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQRTKN 182 (585)
T ss_pred CHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888888888888888888899999999988887777878888888888888
Q ss_pred HHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000845 850 LMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATS-ALCT 928 (1255)
Q Consensus 850 l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~-~~~~ 928 (1255)
..+......+.+.+++.|+++|+.+||+|+.++.+.+++.+..++..+..+.......+.......+..+...++ .+..
T Consensus 183 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~ 262 (585)
T TIGR01192 183 GQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCILVIGT 262 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888999999999999999999999999999988888877666655443333333222223322222222 2223
Q ss_pred HHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCC-CCceEEEE
Q 000845 929 TLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWP-PTGKVEIY 1007 (1255)
Q Consensus 929 ~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p-~~g~I~~~ 1007 (1255)
.....|.++.|.+..++.+...+...+..+...+..+.....+.+|+.++.+.+++.... .. +..++ ..+.|+|+
T Consensus 263 ~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~---~~-~~~~~~~~~~i~~~ 338 (585)
T TIGR01192 263 VLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEP---AD-APELPNVKGAVEFR 338 (585)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC---cc-CCCCCCCCCeEEEE
Confidence 334578889999888888888888899888888988889999999999988765432211 11 11112 34679999
Q ss_pred EEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccC
Q 000845 1008 DLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQD 1087 (1255)
Q Consensus 1008 nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQd 1087 (1255)
||+|+|+++ .++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|++++|||||
T Consensus 339 ~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 417 (585)
T TIGR01192 339 HITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVFQD 417 (585)
T ss_pred EEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEccC
Confidence 999999743 4589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCC
Q 000845 1088 PTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQ 1166 (1255)
Q Consensus 1088 p~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ 1166 (1255)
|.+|++||||||.++. +.+|+++++ +++.+++++++.++|+|+||.++++|.+|||||||||+|||||+++|+
T Consensus 418 ~~lf~~ti~~Ni~~~~~~~~~~~~~~------a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ 491 (585)
T TIGR01192 418 AGLFNRSIRENIRLGREGATDEEVYE------AAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAP 491 (585)
T ss_pred CccCcccHHHHHhcCCCCCCHHHHHH------HHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999998763 578999998 999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHHHHHH
Q 000845 1167 ILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1167 ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~ 1246 (1255)
|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ +|.|+++++.+
T Consensus 492 ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~ 570 (585)
T TIGR01192 492 ILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQK-DGRFYKLLRRS 570 (585)
T ss_pred EEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHC-CChHHHHHHhC
Confidence 99999999999999999999999988889999999999999999999999999999999999999986 78999999865
No 33
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.2e-74 Score=624.74 Aligned_cols=489 Identities=23% Similarity=0.346 Sum_probs=418.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHH-HHHhH
Q 000845 745 FLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVL-GALTW 823 (1255)
Q Consensus 745 ~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~-~~~~~ 823 (1255)
.++...+..+.+.+-.+.|.++.+..+.|+-+..+|.+..-+..-..-++..+...+...+-.++-+....+++ ...+|
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~ 83 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGW 83 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 45567778888899999999999999999999888877666666665666666666666666665554444443 45689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 824 QVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSF 903 (1255)
Q Consensus 824 ~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~ 903 (1255)
|++.+.+..+++|.++......-.-..+|.-.++.+..++.-.+++-+.+|+|.|+.|+.+..++.+.++.+.++.....
T Consensus 84 ~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~ 163 (497)
T COG5265 84 WFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVH 163 (497)
T ss_pred HHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHH
Confidence 99888877777766655444444445566667777788889999999999999999999999999999999999887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCC
Q 000845 904 TAREWLIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIP 982 (1255)
Q Consensus 904 ~~~~wl~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~ 982 (1255)
....|+...-..+........... ...+..+.++.|.......+..++..+++.+-..+.++.+.....|+..+..+.+
T Consensus 164 ~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~ 243 (497)
T COG5265 164 VSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVE 243 (497)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccc
Confidence 776676655444443333222222 2334568899999999999999999999999999999999999999999988776
Q ss_pred CCCcccccCCCCCCCCC-CCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCE
Q 000845 983 SEAPELVQKNSPAPDWP-PTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGK 1061 (1255)
Q Consensus 983 ~e~~~~~~~~~~~~~~p-~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~ 1061 (1255)
.|.. +.+..++-|| ..|.|.|+||+|.|.+.. ++|+|+||++++|+++||||+||+||||+.++|+|||++++|.
T Consensus 244 ~~v~---d~pda~~L~~~~~g~v~F~~V~F~y~~~r-~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~ 319 (497)
T COG5265 244 AEVS---DAPDAPPLWPVRLGAVAFINVSFAYDPRR-PILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGS 319 (497)
T ss_pred hhhc---cCCCCccccccccceEEEEEEEeeccccc-hhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCce
Confidence 5543 2333445564 468899999999998765 5999999999999999999999999999999999999999999
Q ss_pred EEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchh
Q 000845 1062 IIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLV 1140 (1255)
Q Consensus 1062 I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v 1140 (1255)
|.|||+|+..+..+.+|+.||+||||.+||+.|+..|+...+ ..+++|++. |++.++++++|+++|+||||.|
T Consensus 320 I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~a------aa~~aqi~~fi~~lP~gy~t~V 393 (497)
T COG5265 320 ITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGA------AAEAAQIHDFIQSLPEGYDTGV 393 (497)
T ss_pred EEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHH------HHHHhhhhHHHHhCchhhhccc
Confidence 999999999999999999999999999999999999999765 489999998 9999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCC
Q 000845 1141 VQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDG 1220 (1255)
Q Consensus 1141 ~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G 1220 (1255)
||.|-.||||||||++|||++|++|+||+||||||+||..||+.||.+|++..+++|.++|||||+||.++|.|+||++|
T Consensus 394 gerglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g 473 (497)
T COG5265 394 GERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNG 473 (497)
T ss_pred chheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcChhHHhhcCChHHHHHHH
Q 000845 1221 KLVEYDEPKKLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1221 ~ive~G~~~eLl~~~~~~f~~l~~ 1244 (1255)
+|+|.|+|+||+++ +|.|++||.
T Consensus 474 ~i~erg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 474 RIVERGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred EEEecCcHHHHHHc-CChHHHHhc
Confidence 99999999999997 999999985
No 34
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.7e-71 Score=687.01 Aligned_cols=514 Identities=20% Similarity=0.244 Sum_probs=429.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCC-----CCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 693 STFAYLIFLVAQILQSLWIATYIPST-----SIS-RLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSL 766 (1255)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~v 766 (1255)
.+++.++..++.++.++.+.+..+.. ... ...+++++++++++..++.+++.+.....+.+...++|.++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l 87 (529)
T TIGR02857 8 LGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAV 87 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555566666666666554421 111 123344555666677788888999999999999999999999999
Q ss_pred hcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 767 FRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFAT 846 (1255)
Q Consensus 767 l~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 846 (1255)
++.|..+|++.++|++++|+++|++.++..+...+..++..++.+++.+++++..+|.++++++..+++...+..++.+.
T Consensus 88 ~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~ 167 (529)
T TIGR02857 88 AALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWA 167 (529)
T ss_pred HhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888888888888888899999999998877666655555555555666
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 000845 847 AKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATS-A 925 (1255)
Q Consensus 847 ~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~-~ 925 (1255)
.+...+...+..+.+.+++.|+++|+++||+|+.|+++.+++.+..++..+..........+.......+..+...++ .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (529)
T TIGR02857 168 AQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAV 247 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666667777889999999999999999999999999999988888777766655555555555554444333222 2
Q ss_pred HHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEE
Q 000845 926 LCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVE 1005 (1255)
Q Consensus 926 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~ 1005 (1255)
+..+....|.++.|.+..++.++..+..++..+...+..+.....+.+|+.++++.+++... .. +...+..+.|+
T Consensus 248 ~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~----~~-~~~~~~~~~i~ 322 (529)
T TIGR02857 248 YIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG----KA-PVTAAPAPSLE 322 (529)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----Cc-CCCCCCCCeEE
Confidence 22233336788888888888888888888998889999999999999999999875433211 11 11112346899
Q ss_pred EEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEc
Q 000845 1006 IYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIP 1085 (1255)
Q Consensus 1006 ~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vp 1085 (1255)
|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|||
T Consensus 323 ~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~ 402 (529)
T TIGR02857 323 FSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVP 402 (529)
T ss_pred EEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEc
Confidence 99999999765557999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccC
Q 000845 1086 QDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRR 1164 (1255)
Q Consensus 1086 Qdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~ 1164 (1255)
|||++|+|||||||.... ..+|+++++ +++.++++++++++|+||||.+||+|.+||||||||++||||++++
T Consensus 403 Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~------a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 403 QHPFLFAGTIAENIRLARPDASDAEIRR------ALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred CCCcccCcCHHHHHhccCCCCCHHHHHH------HHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 999999999999998754 578999998 9999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEE
Q 000845 1165 RQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSM 1217 (1255)
Q Consensus 1165 ~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl 1217 (1255)
|+|+|||||||+||++|++.|++.+++..+++|+|+||||+++++.||+|+||
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999999988899999999999999999999986
No 35
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3e-70 Score=727.40 Aligned_cols=546 Identities=19% Similarity=0.241 Sum_probs=441.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000845 692 LSTFAYLIFLVAQILQSLWIATYIPST--SISRLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRA 769 (1255)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~ 769 (1255)
+.+++.++..++..+.++.+...++.. ......+++.+++++++..++.+++.+++.+.+.+...++|.+++++++++
T Consensus 64 i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~ 143 (1466)
T PTZ00265 64 VSFVCATISGGTLPFFVSVFGVIMKNMNLGENVNDIIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLEFLKSVFYQ 143 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 334444444455555555555444321 112234455666777788888999999999999999999999999999999
Q ss_pred CcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 770 PMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKE 849 (1255)
Q Consensus 770 p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~ 849 (1255)
|++|||..+.|++.+|++.|++.+...+...+..++..++.+++.++++++.+|.++++++.++++++++..++.+..+.
T Consensus 144 ~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~ 223 (1466)
T PTZ00265 144 DGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKI 223 (1466)
T ss_pred CHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888888877777778777777
Q ss_pred HHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000845 850 LMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALCT- 928 (1255)
Q Consensus 850 l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~- 928 (1255)
..+......+...+.+.|++.|+++||+|+.|+++.+++.+..+.+.+..........+......++..+..+++.++.
T Consensus 224 ~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~ 303 (1466)
T PTZ00265 224 NKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASYAFGFWYGT 303 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777888999999999999999999999999999999888777776655444443333333333222222222222
Q ss_pred HHhccC--------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCC
Q 000845 929 TLLHKG--------HKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPP 1000 (1255)
Q Consensus 929 ~~~~~~--------~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~ 1000 (1255)
.+...+ ..++|.+..++.+.+.....+..+...+..+.....|.+|+.++++.+++.+.. .. ....|.
T Consensus 304 ~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~-~~---~~~~~~ 379 (1466)
T PTZ00265 304 RIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVENN-DD---GKKLKD 379 (1466)
T ss_pred HHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CC---CccCCC
Confidence 122222 344444333333333323333445556777888899999999999876543211 11 111223
Q ss_pred CceEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEE-cCEeCCCCChHHhh
Q 000845 1001 TGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIII-DGLDITTIGLYDLR 1078 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~i-dG~di~~i~~~~lR 1078 (1255)
.+.|+|+||+|+|+.. ..++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|++ ||.|+++++..++|
T Consensus 380 ~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr 459 (1466)
T PTZ00265 380 IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWR 459 (1466)
T ss_pred CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHH
Confidence 3579999999999743 236999999999999999999999999999999999999999999999 57999999999999
Q ss_pred cccEEEccCCccCCCchhhhcccCC-------------------------------------------------------
Q 000845 1079 SNLGIIPQDPTLFSGSVRYNLDPLS------------------------------------------------------- 1103 (1255)
Q Consensus 1079 ~~i~~vpQdp~Lf~gTIr~Nl~~~~------------------------------------------------------- 1103 (1255)
++|+||||+|.||++||+|||.+..
T Consensus 460 ~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 539 (1466)
T PTZ00265 460 SKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRK 539 (1466)
T ss_pred HhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccccchhhhhhccc
Confidence 9999999999999999999997531
Q ss_pred ---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHH
Q 000845 1104 ---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNA 1180 (1255)
Q Consensus 1104 ---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~ 1180 (1255)
..+|+++++ +++.+++++++.++|+||||.++++|.+|||||||||+||||++++|+|||||||||+||++
T Consensus 540 ~~~~~~~~~v~~------a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~ 613 (1466)
T PTZ00265 540 NYQTIKDSEVVD------VSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNK 613 (1466)
T ss_pred ccccCCHHHHHH------HHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHH
Confidence 246678887 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHc--CCcEEEEeccCchhhhhcCEEEEEeCC--------------------------------------
Q 000845 1181 TDSILQNTIRREF--ANCTVITVAHRIATVMDCNMVLSMSDG-------------------------------------- 1220 (1255)
Q Consensus 1181 te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G-------------------------------------- 1220 (1255)
+++.|++.|++.. +++|+|+||||++++..||+|+||++|
T Consensus 614 se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1466)
T PTZ00265 614 SEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNN 693 (1466)
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccccccccccccccccccccccccc
Confidence 9999999999875 479999999999999999999999986
Q ss_pred ---------EEEEEcChhHHhhcCChHHHHHHHHHH
Q 000845 1221 ---------KLVEYDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1221 ---------~ive~G~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
+|+|+|+|+||+++.+|.|+.|++.+.
T Consensus 694 ~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~ 729 (1466)
T PTZ00265 694 NNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQK 729 (1466)
T ss_pred ccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhc
Confidence 599999999999866899999997653
No 36
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.1e-69 Score=667.15 Aligned_cols=524 Identities=19% Similarity=0.231 Sum_probs=425.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCC----CCCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000845 693 STFAYLIFLVAQILQSLWIATYIPS----TSISR-LKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLF 767 (1255)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl 767 (1255)
.+++.++..++.++.++.+....+. ..... ..++++++++.++..++.+++.++....+.+...+++.+++++++
T Consensus 11 ~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 90 (544)
T TIGR01842 11 VGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASF 90 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344455566666667766654432 11111 223444555556667788888899999999999999999999999
Q ss_pred cCCcccccccccchhHHHHhchhhHhhhHhHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 768 RAPMAFYDSTPVGRILSRVSSDLSIIDLDLSI-KSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFAT 846 (1255)
Q Consensus 768 ~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 846 (1255)
+.|+. ..+...+++++|++.+...+.. .+..++..++.++ .++++++.+|+++++++..+++++.+..++.+.
T Consensus 91 ~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~ 164 (544)
T TIGR01842 91 SATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGLALLNNRA 164 (544)
T ss_pred cCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99984 3367789999999999987766 4455555545444 446778889998876665555555555555666
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000845 847 AKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLAT-SA 925 (1255)
Q Consensus 847 ~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~-~~ 925 (1255)
.++..+...+..+...+++.|+++|+++||+|+.++.+.+++.+..++..+..........+.......+..+...+ ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (544)
T TIGR01842 165 TKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLG 244 (544)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666667778888999999999999999999999999999988888877666554444443333333333322222 22
Q ss_pred HHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEE
Q 000845 926 LCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVE 1005 (1255)
Q Consensus 926 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~ 1005 (1255)
+...+...|.+++|.+..++.+...+..++..+...+..+.....+.+|+.++++.+++... ... .+ +..+.|+
T Consensus 245 ~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~~~-~~--~~~~~i~ 318 (544)
T TIGR01842 245 LGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP---AMP-LP--EPEGHLS 318 (544)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC---CCC-CC--CCCCeEE
Confidence 22334457889999999999999999999999999999999999999999999976554321 111 11 2346899
Q ss_pred EEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEc
Q 000845 1006 IYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIP 1085 (1255)
Q Consensus 1006 ~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vp 1085 (1255)
++||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|++++|||
T Consensus 319 ~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~ 398 (544)
T TIGR01842 319 VENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLP 398 (544)
T ss_pred EEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEec
Confidence 99999999765567999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccC
Q 000845 1086 QDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRR 1164 (1255)
Q Consensus 1086 Qdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~ 1164 (1255)
|+|++|++|+|||+..++ +.+++++++ +++.++++++++++|+|+||.++|+|.+||||||||++||||++++
T Consensus 399 q~~~lf~~ti~~Ni~~~~~~~~~~~~~~------~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~ 472 (544)
T TIGR01842 399 QDVELFPGTVAENIARFGENADPEKIIE------AAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGD 472 (544)
T ss_pred CCcccccccHHHHHhccCCCCCHHHHHH------HHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcC
Confidence 999999999999998654 488999998 9999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1165 RQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1165 ~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|+|||||||||+||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||+++
T Consensus 473 ~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 473 PKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 99999999999999999999999999875 57999999999999999999999999999999999999753
No 37
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=5.7e-67 Score=646.42 Aligned_cols=533 Identities=15% Similarity=0.143 Sum_probs=409.7
Q ss_pred hhHHHHHh-cccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 675 KPYIDYLS-HKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPSTSISRLKLVIVYSGIGIGMMFLLLTRSFLVVYLGLE 753 (1255)
Q Consensus 675 ~~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1255)
+..++|++ ..++. +.+.+++.++..+..++.++.+..+.+.........+..++++.++..++.++..++....+.+
T Consensus 6 ~~l~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (555)
T TIGR01194 6 GEILALLRSPFPAI--TAFSIALGLAGGLAIIALLASINNAIHEENFLGQGSLFSFGGLCLLALLFRIGADIFPAYAGMH 83 (555)
T ss_pred HHHHHHHhhccHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555 33322 2233334445555556666666644432211111123334455556667788888888999999
Q ss_pred HHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000845 754 ASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMI 833 (1255)
Q Consensus 754 ~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 833 (1255)
...++|.++++++++.|+.||++.++|++++|+++|++.++..+. .+..++..++.+++.++++++.+|.++++++.++
T Consensus 84 ~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~ 162 (555)
T TIGR01194 84 IIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLF-IFPPIAIALAIFFFCIAYLAYLSVPMFAITISAI 162 (555)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998875 4777778888888888999999999988877666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 834 YLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEE--RFFAKNLDLIDAYASSFFHSFTAREWLIQ 911 (1255)
Q Consensus 834 ~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 911 (1255)
++.+++..++.+..++..+...+..+.+.+.+.|.+.|++++|+|+.++ ...+++.+..++..+..............
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (555)
T TIGR01194 163 IIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAEN 242 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665655555555555566666777889999999999999999999954 44556666555555544332222211111
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccc--
Q 000845 912 RLETLSAIVLATSALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELV-- 989 (1255)
Q Consensus 912 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~-- 989 (1255)
....+..+...+..++. ...+.++.|.+..++.+...+..++..+...+..+.....+.+|+.++.+.+.+++...
T Consensus 243 ~~~~~~~~~~~~~~~~~--~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~ 320 (555)
T TIGR01194 243 FGQLLFFLLIGCALFAA--AMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELEL 320 (555)
T ss_pred HHHHHHHHHHHHHHHHH--HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 11222111111111111 11257788888888888889999999999999999999999999999976422211110
Q ss_pred cC-CCC--CCCCCCCceEEEEEEEEEeCCC---CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEE
Q 000845 990 QK-NSP--APDWPPTGKVEIYDLQIRYRPN---APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKII 1063 (1255)
Q Consensus 990 ~~-~~~--~~~~p~~g~I~~~nvs~~Y~~~---~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~ 1063 (1255)
.. ... .+.....+.|+|+||+|+|++. .+++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|.
T Consensus 321 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~ 400 (555)
T TIGR01194 321 SDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEIL 400 (555)
T ss_pred cccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE
Confidence 00 000 0111234689999999999643 23699999999999999999999999999999999999999999999
Q ss_pred EcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCC
Q 000845 1064 IDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQD 1143 (1255)
Q Consensus 1064 idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~ 1143 (1255)
+||+|+++++.+++|+++++|||||++|++|+++|+. .+.+++++++ +++.+++++++..+|+|+||.
T Consensus 401 ~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~--~~~~~~~~~~------~~~~~~l~~~~~~lp~g~~t~---- 468 (555)
T TIGR01194 401 LDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDEG--EHASLDNAQQ------YLQRLEIADKVKIEDGGFSTT---- 468 (555)
T ss_pred ECCEECCCCCHHHHHhhCcEEccChhhhhhhhhcccc--cchhHHHHHH------HHHHcCCchhhcccccccCCc----
Confidence 9999999999999999999999999999999999974 3567888888 999999999999999999995
Q ss_pred CCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHH-H-cCCcEEEEeccCchhhhhcCEEEEEeCCE
Q 000845 1144 GANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRR-E-FANCTVITVAHRIATVMDCNMVLSMSDGK 1221 (1255)
Q Consensus 1144 G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~-~-~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1221 (1255)
.+|||||||||+||||++++|+|||||||||+||++|++.+++.+.+ . .+++|+|+||||++++..||+|+||++|+
T Consensus 469 -~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~ 547 (555)
T TIGR01194 469 -TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGC 547 (555)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCE
Confidence 68999999999999999999999999999999999999999887643 3 36899999999999999999999999999
Q ss_pred EEEE
Q 000845 1222 LVEY 1225 (1255)
Q Consensus 1222 ive~ 1225 (1255)
++|.
T Consensus 548 i~~~ 551 (555)
T TIGR01194 548 IVKD 551 (555)
T ss_pred EEEe
Confidence 9975
No 38
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.1e-66 Score=605.43 Aligned_cols=496 Identities=21% Similarity=0.261 Sum_probs=398.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-Cccc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 121 LISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEG-EIIF---KYEIYSLAISLFLVKCVESLAGRHWFFQSRLTG 196 (1255)
Q Consensus 121 l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1255)
+.+..|+.+..+.++.++.......-|.+++++++.+.. .+.. ......+++..++..+..++-..++.+...|+.
T Consensus 141 l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv~ 220 (716)
T KOG0058|consen 141 LLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGERVV 220 (716)
T ss_pred HhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344568888889999999999999999999999998876 2221 111222222233333333333445555566666
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHH
Q 000845 197 LKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGL-ATIATL 274 (1255)
Q Consensus 197 ~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~-~~l~g~ 274 (1255)
.++|..+ |++.++....-.+++.+|++++.++.|++-+.+.+. ++....-..++...++.++.. +.| .+++.+
T Consensus 221 ~rlR~~l----F~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~-~S~~Ltlv~~ 295 (716)
T KOG0058|consen 221 ARLRTDL----FRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFS-LSWRLTLVTL 295 (716)
T ss_pred HHHHHHH----HHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh-hhHHHHHHHH
Confidence 6666555 555555555556778899999999999999988654 566666677778877777653 456 667788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 275 IVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYM 354 (1255)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 354 (1255)
+++++++.+..+++++..+..++...+..+-.+..+|.|++||+|++|+-|+...+|..+.=++-++..+|..+..++..
T Consensus 296 i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~ 375 (716)
T KOG0058|consen 296 IVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFF 375 (716)
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhH
Confidence 88888888888889999999999999999999999999999999999999998888877644433443344333333222
Q ss_pred HH--HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcch
Q 000845 355 VL--FWSSPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDM 432 (1255)
Q Consensus 355 ~~--~~~~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 432 (1255)
.. +......++++.+|.|...++.+|++...+.+.+-..+..++..+...++.++++..+.+|+.++++.++.-+..-
T Consensus 376 ~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G 455 (716)
T KOG0058|consen 376 GSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTG 455 (716)
T ss_pred hHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCC
Confidence 22 1112245666778888888899999999999988888889999999999999999999999999999865433221
Q ss_pred hcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC----------
Q 000845 433 QQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG---------- 502 (1255)
Q Consensus 433 ~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G---------- 502 (1255)
...|. ..++.|+|+|++|+||.+++.|+|+|+||+|+|||.||+|||+||||||+.++|+++|+|++|
T Consensus 456 ~~~p~--~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~ 533 (716)
T KOG0058|consen 456 TLAPD--HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPIS 533 (716)
T ss_pred ccccc--cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehh
Confidence 11221 267899999999999999999999999999999999999999999999999999999999999
Q ss_pred ---------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHH
Q 000845 503 ---------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRI 531 (1255)
Q Consensus 503 ---------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRI 531 (1255)
..|..+|+|++|.|||+|..|||||||||
T Consensus 534 ~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRI 613 (716)
T KOG0058|consen 534 DINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRI 613 (716)
T ss_pred hcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHH
Confidence 35778999999999999999999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 532 QLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 532 aLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
||||||++||.||||||+|||||++++ +++++++...++++|||+|+||++++++||+|+|+++|+++|.|+|+|+++.
T Consensus 614 AIARALlr~P~VLILDEATSALDaeSE-~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~ 692 (716)
T KOG0058|consen 614 AIARALLRNPRVLILDEATSALDAESE-YLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSK 692 (716)
T ss_pred HHHHHHhcCCCEEEEechhhhcchhhH-HHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhC
Confidence 999999999999999999999999995 6779999999999999999999999999999999999999999999999987
Q ss_pred c-hHHHHHHHHhhh
Q 000845 612 S-QEFQDLVNAHKE 624 (1255)
Q Consensus 612 ~-~~~~~l~~~~~~ 624 (1255)
. +.|.++++.+..
T Consensus 693 ~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 693 PNGLYAKLVQRQLD 706 (716)
T ss_pred cccHHHHHHHHhcc
Confidence 6 689999876543
No 39
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.3e-67 Score=606.84 Aligned_cols=227 Identities=26% Similarity=0.395 Sum_probs=188.8
Q ss_pred eEEEEEEEEEeCC---------CCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEe--CCC
Q 000845 1003 KVEIYDLQIRYRP---------NAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLD--ITT 1071 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~---------~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~d--i~~ 1071 (1255)
-++++|++.+|.. +...+++||||++++||++||||.||||||||.++|+|+++|++|+|.++|.| .+.
T Consensus 280 ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~ 359 (539)
T COG1123 280 LLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTG 359 (539)
T ss_pred eeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCccccccc
Confidence 5889999999963 12468999999999999999999999999999999999999999999999977 333
Q ss_pred CChHHhhcccEEEccCCcc--C-CCchhhhcc-cCC---CCCh----HHHHhccCchhHHHhccHHH-HHHhhhcCccch
Q 000845 1072 IGLYDLRSNLGIIPQDPTL--F-SGSVRYNLD-PLS---QFTD----QEIWEVTIPSQVLEKCQLRE-VIQEKKEGLDSL 1139 (1255)
Q Consensus 1072 i~~~~lR~~i~~vpQdp~L--f-~gTIr~Nl~-~~~---~~sd----~ei~~~~~~~~al~~~~l~~-~i~~lp~gldt~ 1139 (1255)
-....+|+++-+|+|||+- - ..||+++|. |.. .... +.+-+ .++.++|.+ +....
T Consensus 360 ~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~------ll~~VgL~~~~l~ry------- 426 (539)
T COG1123 360 GELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAE------LLELVGLPPEFLDRY------- 426 (539)
T ss_pred chhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHH------HHHHcCCCHHHHhcC-------
Confidence 3345678899999999973 2 359999985 322 1111 12333 577777754 33333
Q ss_pred hcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEE
Q 000845 1140 VVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLS 1216 (1255)
Q Consensus 1140 v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~v 1216 (1255)
...||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|.+..+ +.|.|+|||+++.++. ||||+|
T Consensus 427 ----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~v 502 (539)
T COG1123 427 ----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAV 502 (539)
T ss_pred ----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEE
Confidence 457999999999999999999999999999999999999999999987653 6899999999999988 999999
Q ss_pred EeCCEEEEEcChhHHhhcCChHHHHHHHHH
Q 000845 1217 MSDGKLVEYDEPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1217 l~~G~ive~G~~~eLl~~~~~~f~~l~~~~ 1246 (1255)
|++|+|||.|+.++..+++...|.+.+-+.
T Consensus 503 m~~G~iVE~G~~~~v~~~p~h~Ytr~L~~a 532 (539)
T COG1123 503 MYDGRIVEEGPTEKVFENPQHPYTRKLLAA 532 (539)
T ss_pred EECCeEEEeCCHHHHhcCCCChHHHHHHHh
Confidence 999999999999999999888888766543
No 40
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=9.4e-64 Score=672.83 Aligned_cols=474 Identities=18% Similarity=0.214 Sum_probs=378.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000845 748 VYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLL 827 (1255)
Q Consensus 748 ~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 827 (1255)
...+.+....++..+++++++.|..++++.++|+++||+++|++.++... ..+..++...+.++++++++...-.+..+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l 444 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASL 444 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 56777888888889999999999999999999999999999999999875 44444544444444444433221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 828 VIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTARE 907 (1255)
Q Consensus 828 ~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1255)
+.++++++++.+..++.+..++.++...+.+....+.+.|.++|+++||+|++|+.+.+++.+..++..+..........
T Consensus 445 ~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~ 524 (1495)
T PLN03232 445 FGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSA 524 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222233333455566666777777777888899999999999999999999999999998877776665544433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcc
Q 000845 908 WLIQRLETLSAIVLATSALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPE 987 (1255)
Q Consensus 908 wl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~ 987 (1255)
+.......... ++.+..+.......+.++++.+-.++++...+..++..+...+..+.....|.+|+.++++.+++...
T Consensus 525 ~~~~~~~~~~~-~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~ 603 (1495)
T PLN03232 525 FNSFILNSIPV-VVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILA 603 (1495)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 33222211111 11112222233346778888888888888888888888888999999999999999999976543211
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcC
Q 000845 988 LVQKNSPAPDWPPTGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDG 1066 (1255)
Q Consensus 988 ~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG 1066 (1255)
. .++ ..+..+.|+|+|++|+|+++ .+++|+|+||+|++||++||||+||||||||+++|+|+++|++|.+.
T Consensus 604 ~----~~~-~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~--- 675 (1495)
T PLN03232 604 Q----NPP-LQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV--- 675 (1495)
T ss_pred c----cCC-cCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE---
Confidence 1 111 11234579999999999753 45799999999999999999999999999999999999999999763
Q ss_pred EeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1067 LDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1067 ~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
.+|++|+||||+|+||+|||||||.++.+++++++++ +++.|++.++++.+|+|+||.|||+|.+
T Consensus 676 ---------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~------vl~~~~L~~di~~Lp~Gd~T~IGe~G~~ 740 (1495)
T PLN03232 676 ---------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWR------AIDVTALQHDLDLLPGRDLTEIGERGVN 740 (1495)
T ss_pred ---------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHH------HHHHhCCHHHHHhCCCCCCceecCCCcc
Confidence 3688999999999999999999999887888899988 9999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHH-HHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEE
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQ-NTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~-~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1225 (1255)
||||||||||||||++++|+|+|||||||+||++|++.|. +.++...+++|+|+||||++++..||+|++|++|+|+|.
T Consensus 741 LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~ 820 (1495)
T PLN03232 741 ISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEE 820 (1495)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEe
Confidence 9999999999999999999999999999999999999774 557767789999999999999999999999999999999
Q ss_pred cChhHHhhcCChHHHHHHHHHH
Q 000845 1226 DEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1226 G~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
|+|+||+++ ++.|+++++.++
T Consensus 821 Gt~~eL~~~-~~~~~~l~~~~~ 841 (1495)
T PLN03232 821 GTFAELSKS-GSLFKKLMENAG 841 (1495)
T ss_pred cCHHHHHhc-chhHHHHHHhcc
Confidence 999999985 789999987654
No 41
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.4e-63 Score=669.98 Aligned_cols=473 Identities=18% Similarity=0.219 Sum_probs=380.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000845 748 VYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLL 827 (1255)
Q Consensus 748 ~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 827 (1255)
...+.+....++..+++++++.|..++++.++|+++|++++|++.++... ..+..++...+.++++++++.....+..+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~-~~l~~l~~~pl~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQIC-QQLHTLWSAPFRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777788888889999999999999999999999999999999999876 34555555555555555544432222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 828 VIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTARE 907 (1255)
Q Consensus 828 ~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1255)
+.++++++++.+..++.+..++.++..........+.+.|.++|+++||+|++|+.|.+++.+..+...+..........
T Consensus 445 ~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~ 524 (1622)
T PLN03130 445 IGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSA 524 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333344455556666666777777777888899999999999999999999999999998877776554433333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcc
Q 000845 908 WLIQRLETLSAIVLATSALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPE 987 (1255)
Q Consensus 908 wl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~ 987 (1255)
+.......... ++.+..+..+....+.++++.+-.++++...+..++..+...+..+.....+.+|+.++++.+++...
T Consensus 525 ~~~~~~~~~~~-~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~ 603 (1622)
T PLN03130 525 FNSFILNSIPV-LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLL 603 (1622)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 22222111111 11122222333446778888888888888888888888888899999999999999999876543211
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCC-CEEEEc
Q 000845 988 LVQKNSPAPDWPPTGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTG-GKIIID 1065 (1255)
Q Consensus 988 ~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~-G~I~id 1065 (1255)
. .++ .-+..+.|+|+||+|+|+++ .+++|+|+||+|++||++||||+||||||||+++|+|+++|++ |+|.
T Consensus 604 ~----~~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~-- 676 (1622)
T PLN03130 604 P----NPP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVV-- 676 (1622)
T ss_pred c----CCc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEE--
Confidence 0 011 01223579999999999743 3579999999999999999999999999999999999999999 8997
Q ss_pred CEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCC
Q 000845 1066 GLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1066 G~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
+|++|+||||+|+||+|||||||.++.+++++++++ +++.|+|+++++.+|+|+||.|||+|.
T Consensus 677 -----------l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~------vl~a~~L~~di~~LP~Gd~T~IGe~G~ 739 (1622)
T PLN03130 677 -----------IRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYER------AIDVTALQHDLDLLPGGDLTEIGERGV 739 (1622)
T ss_pred -----------EcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHH------HHHHhCcHHHHHhCCCcccccccCCCC
Confidence 477899999999999999999999888888888888 999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHH-HHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSIL-QNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i-~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive 1224 (1255)
+|||||||||+||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+|+|
T Consensus 740 ~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e 819 (1622)
T PLN03130 740 NISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKE 819 (1622)
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEE
Confidence 9999999999999999999999999999999999999876 567777778999999999999999999999999999999
Q ss_pred EcChhHHhhcCChHHHHHHHHHH
Q 000845 1225 YDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1225 ~G~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
+|+|+||+++ ++.|+++++..+
T Consensus 820 ~Gt~~eL~~~-~~~~~~l~~~~~ 841 (1622)
T PLN03130 820 EGTYEELSNN-GPLFQKLMENAG 841 (1622)
T ss_pred eCCHHHHHhc-chhHHHHHHhcc
Confidence 9999999975 788999987654
No 42
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=4.1e-63 Score=612.36 Aligned_cols=475 Identities=18% Similarity=0.197 Sum_probs=366.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHH
Q 000845 732 IGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAV 811 (1255)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~ 811 (1255)
+.++..++.++..++....+.+...++|.++++++++.|++||+++++|++++|+++|++.+...+. .+..++..++.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~ 135 (547)
T PRK10522 57 LLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILT 135 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHH
Confidence 3333445667788888899999999999999999999999999999999999999999999987654 567778888888
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcH---HHHHHHH
Q 000845 812 ISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNE---ERFFAKN 888 (1255)
Q Consensus 812 i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~---~~~~~~~ 888 (1255)
++.++++++++|.+++++++.+++.+++..++.+..+...+...+..+.+.+++.|.++|+.+++ ++.+ +.+.+++
T Consensus 136 i~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~ 214 (547)
T PRK10522 136 LGSAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEY 214 (547)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHH
Confidence 99999999999999988777777766666666666666666667788899999999999999995 5443 3456666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh-ccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000845 889 LDLIDAYASSFFHSFTAREWLIQRLETLSAIVL-ATSALCTTLL-HKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVG 966 (1255)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~ 966 (1255)
.+..++..+....... +......+..++. .+..++.+.. ..+....+..+....+...+..++..+...+..+.
T Consensus 215 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~ 290 (547)
T PRK10522 215 EPDAQEYRHHIIRADT----FHLSAVNWSNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLL 290 (547)
T ss_pred hHHHHHHHhhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666555443332221 1111111111111 1111111111 01112233333333344445677888888888899
Q ss_pred hhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHH
Q 000845 967 NLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTT 1046 (1255)
Q Consensus 967 ~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKST 1046 (1255)
....+.+|+.++.+.+.+++.. ...+ -|..+.|+|+||+|+|+. .+++|+|+||+|+|||++||||||||||||
T Consensus 291 ~~~~a~~ri~~l~~~~~~~~~~--~~~~---~~~~~~i~~~~v~f~y~~-~~~~l~~i~~~i~~G~~~aivG~sGsGKST 364 (547)
T PRK10522 291 SAQVAFNKLNKLALAPYKAEFP--RPQA---FPDWQTLELRNVTFAYQD-NGFSVGPINLTIKRGELLFLIGGNGSGKST 364 (547)
T ss_pred HHHHHHHHHHHHhccccccccc--cccc---cCcCceEEEEEEEEEeCC-CCeEEecceEEEcCCCEEEEECCCCCCHHH
Confidence 9999999999987654332111 1111 112357999999999974 346999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHH
Q 000845 1047 LISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLR 1126 (1255)
Q Consensus 1047 Ll~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~ 1126 (1255)
|+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||||++|+||+++| ....+++++++ +++++++.
T Consensus 365 L~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~------~~~~~~l~ 435 (547)
T PRK10522 365 LAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEK------WLERLKMA 435 (547)
T ss_pred HHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHH------HHHHcCCc
Confidence 9999999999999999999999999999999999999999999999999999 23566777776 88888877
Q ss_pred HHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccC
Q 000845 1127 EVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHR 1204 (1255)
Q Consensus 1127 ~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHr 1204 (1255)
+.+.. ++|. .+|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||
T Consensus 436 ~~~~~-~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~ 509 (547)
T PRK10522 436 HKLEL-EDGR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHD 509 (547)
T ss_pred hhhhc-cccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEec
Confidence 66542 3332 1478999999999999999999999999999999999999999999987654 47999999999
Q ss_pred chhhhhcCEEEEEeCCEEEEE-cChhHHhh
Q 000845 1205 IATVMDCNMVLSMSDGKLVEY-DEPKKLLR 1233 (1255)
Q Consensus 1205 l~ti~~~DrI~vl~~G~ive~-G~~~eLl~ 1233 (1255)
++++..||+|++|++|+++|. |++.+-+.
T Consensus 510 ~~~~~~~d~i~~l~~G~i~e~~~~~~~~~~ 539 (547)
T PRK10522 510 DHYFIHADRLLEMRNGQLSELTGEERDAAS 539 (547)
T ss_pred hHHHHhCCEEEEEECCEEEEecCCchhhhh
Confidence 999999999999999999998 55554443
No 43
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6e-62 Score=609.55 Aligned_cols=499 Identities=22% Similarity=0.245 Sum_probs=389.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 116 SILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLT 195 (1255)
Q Consensus 116 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1255)
..++...+.+++.++.+.++.++..++..+.|++++++++.+..++......+.++++++++.++..++.....+...+.
T Consensus 11 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (588)
T PRK11174 11 RWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKA 90 (588)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445667788889999999999999999999999999997642211122233344455566666777777777788889
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhH-HHHHH
Q 000845 196 GLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGL-ATIAT 273 (1255)
Q Consensus 196 ~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~-~~l~g 273 (1255)
+.++...+...+|+|.++++.....+.++|++.|.+++|++++.+.+. .+..++...+..+++++++++ ++| .+++.
T Consensus 91 ~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~l~~ 169 (588)
T PRK11174 91 GQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFP-INWAAGLIL 169 (588)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 999999999999999999998888888999999999999999998764 455666555555555554443 344 44455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHH----HHHHHHHHHHHHHHHHH
Q 000845 274 LIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVI----EKLRSEEYGWLKVLQLQ 349 (1255)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i----~~~R~~El~~~~~~~~~ 349 (1255)
++++++...+..++.++.++..++.++..++..+.+.|.++|+++||.|+||+.+.+++ ++.|+.+++..+.....
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 170 LGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555566678888888999999999999999999999999999999999888876 45666665555544434
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 350 KGYYMVLFWSSPILIGAATLLTCYFLGIPLN---------PSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIAN 420 (1255)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~L~---------~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~ 420 (1255)
..+..++... +.+ .++.++.+.+. +.++ +..+|.++.+...+..|+..++..+..+.++++|++||.+
T Consensus 250 ~~~~~~~~~~-~~~-~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 250 SAVLEFFASI-SIA-LVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHHHH-HHH-HHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333322221 111 12223333333 3333 3445555566777889999999999999999999999999
Q ss_pred HhcCCCCCCcchhcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCC
Q 000845 421 FLEAPELQNSDMQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRL 500 (1255)
Q Consensus 421 fL~~~e~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~ 500 (1255)
+++.|+.+..... .+...+..+.|+++|++|.|+.+ +++|+|+||++++|++++|||++|||||||+++|+|++ |.
T Consensus 327 ~l~~~~~~~~~~~-~~~~~~~~~~i~~~~vsf~~~~~--~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~ 402 (588)
T PRK11174 327 FLETPLAHPQQGE-KELASNDPVTIEAEDLEILSPDG--KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY 402 (588)
T ss_pred HHcCCCcccCCCc-cccCCCCCceEEEEeeEEeccCC--CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC
Confidence 9987653221111 00010123469999999877643 47999999999999999999999999999999999999 88
Q ss_pred CC-------------------------------------------------------------cccCCCCCCCccccccC
Q 000845 501 QG-------------------------------------------------------------MDLKMLPFGDLTQIGER 519 (1255)
Q Consensus 501 ~G-------------------------------------------------------------~Di~~lp~gd~T~iGe~ 519 (1255)
+| +++..+|+|++|.|||+
T Consensus 403 ~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 403 QGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred CcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 88 35778999999999999
Q ss_pred CCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEE
Q 000845 520 GVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEI 599 (1255)
Q Consensus 520 G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i 599 (1255)
|.+|||||||||+||||++++|+|+||||||||||+++++.|.+ .+..+.++||+|+||||++.++.||+|++|++|++
T Consensus 483 G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~-~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i 561 (588)
T PRK11174 483 AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQ-ALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQI 561 (588)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeE
Confidence 99999999999999999999999999999999999999998864 66777789999999999999999999999999999
Q ss_pred EEecChhHHhhcchHHHHHHHHhh
Q 000845 600 IQAATYDHLLVTSQEFQDLVNAHK 623 (1255)
Q Consensus 600 ~~~G~~~el~~~~~~~~~l~~~~~ 623 (1255)
+++|+|+|++++++.|.+++..+.
T Consensus 562 ~e~G~~~eL~~~~~~y~~l~~~q~ 585 (588)
T PRK11174 562 VQQGDYAELSQAGGLFATLLAHRQ 585 (588)
T ss_pred eecCCHHHHHhcchHHHHHHHHhh
Confidence 999999999998888988876543
No 44
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.8e-61 Score=589.92 Aligned_cols=503 Identities=24% Similarity=0.306 Sum_probs=423.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 114 HPSILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSR 193 (1255)
Q Consensus 114 ~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1255)
..+.++..++-+++.+.-..+..++..++.++.|++.+.++|.+--.. ....-+.+++++.+..+...++...-.|...
T Consensus 141 ~~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~-~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 141 GLSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDA-SRSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred chHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666678888888888899999999999999999999875332 2344556677777778888877777788888
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000845 194 LTGLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFW-FHQIWSTSLQLCIAVVVVYYSVGLATIA 272 (1255)
Q Consensus 194 ~~~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~v~~~lL~~~lG~~~l~ 272 (1255)
+++.|+...+...+|++.++++.....++++|++++.++ |.++|.+++.. +.....-.+..++.+.+++++-++.+++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li 298 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLI 298 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888899999999976 58888887653 2233322233444445555555668888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 273 TLIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGY 352 (1255)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~ 352 (1255)
+++.+++.+.+..++.+.+++..++.+....++-+...|.++||++||..+-|+.+..+.++.=.+.++...+.......
T Consensus 299 ~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~ 378 (709)
T COG2274 299 VLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALI 378 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 88888888889999999999999999999999999999999999999999999999999988777777666655555544
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 000845 353 YMVLFWSSPIL--IGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNS 430 (1255)
Q Consensus 353 ~~~~~~~~~~~--~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~ 430 (1255)
..........+ +.+++||++.+..+.+|.+..+++..+.+.+..|+..+......+.+++++.+|+.+.++.|.-++.
T Consensus 379 ~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~ 458 (709)
T COG2274 379 LNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEG 458 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 44332222222 5567899999999999999999999999999999999999999999999999999999998754322
Q ss_pred chhcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC--------
Q 000845 431 DMQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG-------- 502 (1255)
Q Consensus 431 ~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G-------- 502 (1255)
...... ..+.++.|+++|++|+|..+++ ++|+|+||+|++||.++|||++|||||||+++|+|.++|.+|
T Consensus 459 ~~~~~~-~~~~~g~I~~~nvsf~y~~~~~-~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~d 536 (709)
T COG2274 459 DKTLIH-LPKLQGEIEFENVSFRYGPDDP-PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVD 536 (709)
T ss_pred cccccc-ccccCceEEEEEEEEEeCCCCc-chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEe
Confidence 211011 1126789999999999998754 899999999999999999999999999999999999999999
Q ss_pred -----------------------------------------------------cccCCCCCCCccccccCCCcCChHHHH
Q 000845 503 -----------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQ 529 (1255)
Q Consensus 503 -----------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkq 529 (1255)
+++..+|.|++|.|||+|.+|||||||
T Consensus 537 l~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQ 616 (709)
T COG2274 537 LNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQ 616 (709)
T ss_pred HHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHH
Confidence 468899999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHh
Q 000845 530 RIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLL 609 (1255)
Q Consensus 530 RIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~ 609 (1255)
|++||||++++|+|+||||||||||+++++.|.+++ .....|||+|+||||++.+++||+|+||++|+|+++|+|+|++
T Consensus 617 rlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L-~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell 695 (709)
T COG2274 617 RLALARALLSKPKILLLDEATSALDPETEAIILQNL-LQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELL 695 (709)
T ss_pred HHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHH-HHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHH
Confidence 999999999999999999999999999998887664 5667899999999999999999999999999999999999999
Q ss_pred hcchHHHHHHHH
Q 000845 610 VTSQEFQDLVNA 621 (1255)
Q Consensus 610 ~~~~~~~~l~~~ 621 (1255)
+..+.|.+++..
T Consensus 696 ~~~g~y~~l~~~ 707 (709)
T COG2274 696 AQGGLYARLYQQ 707 (709)
T ss_pred HhcChHHHHHhc
Confidence 988888887654
No 45
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-63 Score=617.50 Aligned_cols=230 Identities=25% Similarity=0.344 Sum_probs=186.2
Q ss_pred eEEEEEEEEEeCCC---------CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC
Q 000845 1003 KVEIYDLQIRYRPN---------APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG 1073 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~---------~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~ 1073 (1255)
-++++||+++|+.. ...+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+
T Consensus 313 ~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~ 392 (623)
T PRK10261 313 ILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLS 392 (623)
T ss_pred eEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCC
Confidence 59999999999521 135999999999999999999999999999999999999999999999999998776
Q ss_pred hH---HhhcccEEEccCCc--cCC-Cchhhhccc-C---CCCChHHHHhccCchhHHHhccHH-HHHHhhhcCccchhcC
Q 000845 1074 LY---DLRSNLGIIPQDPT--LFS-GSVRYNLDP-L---SQFTDQEIWEVTIPSQVLEKCQLR-EVIQEKKEGLDSLVVQ 1142 (1255)
Q Consensus 1074 ~~---~lR~~i~~vpQdp~--Lf~-gTIr~Nl~~-~---~~~sd~ei~~~~~~~~al~~~~l~-~~i~~lp~gldt~v~e 1142 (1255)
.. .+|++|+||||+|. ++. -|+++|+.. . +....++..+ ...++++.+++. +....
T Consensus 393 ~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~--~~~~~L~~~gL~~~~~~~----------- 459 (623)
T PRK10261 393 PGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAA--RVAWLLERVGLLPEHAWR----------- 459 (623)
T ss_pred HHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHH--HHHHHHHHcCCCHHHhhC-----------
Confidence 43 35778999999983 665 499999852 1 1111211111 001256666663 23222
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeC
Q 000845 1143 DGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSD 1219 (1255)
Q Consensus 1143 ~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~ 1219 (1255)
....||||||||++|||||+.+|+|||||||||+||+.+.+.|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 460 ~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~ 539 (623)
T PRK10261 460 YPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYL 539 (623)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 2357999999999999999999999999999999999999999999987643 6899999999999976 999999999
Q ss_pred CEEEEEcChhHHhhcCChHHHH-HHHH
Q 000845 1220 GKLVEYDEPKKLLRRQDSLFAQ-LVKE 1245 (1255)
Q Consensus 1220 G~ive~G~~~eLl~~~~~~f~~-l~~~ 1245 (1255)
|+|+|.|+++++..++...|.+ ++..
T Consensus 540 G~iv~~g~~~~i~~~p~~~~~~~l~~~ 566 (623)
T PRK10261 540 GQIVEIGPRRAVFENPQHPYTRKLMAA 566 (623)
T ss_pred CEEEEecCHHHHhcCCCCHHHHHHHhh
Confidence 9999999999998776555544 5543
No 46
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.1e-61 Score=540.75 Aligned_cols=521 Identities=21% Similarity=0.240 Sum_probs=398.5
Q ss_pred HHHHHHHHHHHHHHhhhcC----CCCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 000845 698 LIFLVAQILQSLWIATYIP----STSISRLKLVIV-YSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMA 772 (1255)
Q Consensus 698 ~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~ 772 (1255)
.+..++....++|+-...| ..+..+..++.+ ..++.++..++-.+|+.++.+++.+.-.++...+|...+++|..
T Consensus 33 ~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~ 112 (580)
T COG4618 33 AVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLL 112 (580)
T ss_pred HHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHh
Confidence 3344444555555443322 233333333333 33455666788889999999999999999999999999877765
Q ss_pred cccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 773 FYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMR 852 (1255)
Q Consensus 773 ~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~ 852 (1255)
--...+....+ +|.+.+..++...-...+...-.+-..+.+++.+.||+.++.+...++++.+...-...+++--+
T Consensus 113 ~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~ 188 (580)
T COG4618 113 RRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLK 188 (580)
T ss_pred hcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 33322223333 46667776665533333322223344566777888998887777666666666665666666666
Q ss_pred HHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Q 000845 853 INGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAI-VLATSALCTTLL 931 (1255)
Q Consensus 853 ~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~-~~~~~~~~~~~~ 931 (1255)
...+....-+.+..-+.++.++|+|.|+.....+++.+....+....-...-.+.-++.....+=.+ -..+..+.+++.
T Consensus 189 eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lv 268 (580)
T COG4618 189 EASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLV 268 (580)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeE
Confidence 6777777888899999999999999999988877776655555443332222221111111111100 011222334455
Q ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEE
Q 000845 932 HKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQI 1011 (1255)
Q Consensus 932 ~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~ 1011 (1255)
..+++++|.+...-........++-..+..|..+.....|..|++++++..++.....+ -| - .+|.+.++++++
T Consensus 269 i~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m~--LP---~-P~g~L~Ve~l~~ 342 (580)
T COG4618 269 IKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAERMP--LP---A-PQGALSVERLTA 342 (580)
T ss_pred EcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCC--CC---C-CCceeeEeeeee
Confidence 67888888766554455556677888899999999999999999999876544322111 11 1 268999999999
Q ss_pred EeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccC
Q 000845 1012 RYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLF 1091 (1255)
Q Consensus 1012 ~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf 1091 (1255)
.=|+...++|+|+||+++|||-+|||||||||||||.++|.|..+|.+|+|.+||-|+++.+.+++-++|||.|||-.||
T Consensus 343 ~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF 422 (580)
T COG4618 343 APPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELF 422 (580)
T ss_pred cCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceec
Confidence 65555668999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEE
Q 000845 1092 SGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVL 1170 (1255)
Q Consensus 1092 ~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiL 1170 (1255)
+|||+|||.-++ +.+++.|.+ |.+.++.||.|..+|+||||.+||+|..|||||||||+||||+..+|.+++|
T Consensus 423 ~GTIaeNIaRf~~~~d~~kIie------AA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVL 496 (580)
T COG4618 423 DGTIAENIARFGEEADPEKVIE------AARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVL 496 (580)
T ss_pred CCcHHHHHHhccccCCHHHHHH------HHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEe
Confidence 999999998666 677788998 9999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1171 DEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1171 DE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|||-|+||.+-|+.+.++|.+.. +|+|+|+||||++.+..+|+|+||++|++..+|+-+|.+++
T Consensus 497 DEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 497 DEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999998765 68999999999999999999999999999999999998875
No 47
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.4e-63 Score=610.66 Aligned_cols=217 Identities=24% Similarity=0.440 Sum_probs=178.7
Q ss_pred eEEEEEEEEEeCC---------CCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC
Q 000845 1003 KVEIYDLQIRYRP---------NAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG 1073 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~---------~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~ 1073 (1255)
-|+++|++++|+. +...+|+|+||+|++||++||+|+||||||||+++|.|+++ ++|+|++||.++...+
T Consensus 275 ~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~~~ 353 (529)
T PRK15134 275 LLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHNLN 353 (529)
T ss_pred cccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEccccc
Confidence 4899999999952 13469999999999999999999999999999999999985 8999999999998776
Q ss_pred hHH---hhcccEEEccCC--ccCC-CchhhhcccC---C--CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccc
Q 000845 1074 LYD---LRSNLGIIPQDP--TLFS-GSVRYNLDPL---S--QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDS 1138 (1255)
Q Consensus 1074 ~~~---lR~~i~~vpQdp--~Lf~-gTIr~Nl~~~---~--~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt 1138 (1255)
... +|++++||||+| .+|. .|+++|+... . .... +.+.+ +++..++.+ .
T Consensus 354 ~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~----------~ 417 (529)
T PRK15134 354 RRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIA------VMEEVGLDP----------E 417 (529)
T ss_pred hhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHH------HHHHcCCCH----------H
Confidence 543 477899999998 3666 4999999631 1 0111 11222 455555531 1
Q ss_pred hhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEE
Q 000845 1139 LVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVL 1215 (1255)
Q Consensus 1139 ~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~ 1215 (1255)
.......+||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|+
T Consensus 418 ~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~ 497 (529)
T PRK15134 418 TRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQVI 497 (529)
T ss_pred HHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEE
Confidence 1222335799999999999999999999999999999999999999999999764 37899999999999876 99999
Q ss_pred EEeCCEEEEEcChhHHhhcCC
Q 000845 1216 SMSDGKLVEYDEPKKLLRRQD 1236 (1255)
Q Consensus 1216 vl~~G~ive~G~~~eLl~~~~ 1236 (1255)
+|++|+|++.|++++++..+.
T Consensus 498 ~l~~G~i~~~~~~~~~~~~~~ 518 (529)
T PRK15134 498 VLRQGEVVEQGDCERVFAAPQ 518 (529)
T ss_pred EEECCEEEEEcCHHHHhcCCC
Confidence 999999999999999987543
No 48
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=3.9e-62 Score=527.67 Aligned_cols=224 Identities=28% Similarity=0.474 Sum_probs=184.3
Q ss_pred eEEEEEEEEEeCCC---------CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC
Q 000845 1003 KVEIYDLQIRYRPN---------APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG 1073 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~---------~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~ 1073 (1255)
-++.+||.+.|+-. .-.+.++|||++++||.+||||.||||||||-.+|+|+.++. |+|.++|.||...+
T Consensus 276 ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~ 354 (534)
T COG4172 276 LLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLS 354 (534)
T ss_pred eEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccC
Confidence 57888888888421 124899999999999999999999999999999999999876 99999999999988
Q ss_pred hHH---hhcccEEEccCCc--cCC-Cchhhhcc----cCC-CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccc
Q 000845 1074 LYD---LRSNLGIIPQDPT--LFS-GSVRYNLD----PLS-QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDS 1138 (1255)
Q Consensus 1074 ~~~---lR~~i~~vpQdp~--Lf~-gTIr~Nl~----~~~-~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt 1138 (1255)
.+. +|+++-+|+|||+ |=+ -||-+-|. ... ..++ +.+.+ ||+.+||+.-...
T Consensus 355 ~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~------aL~EVGLDp~~r~------- 421 (534)
T COG4172 355 RKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIE------ALEEVGLDPATRN------- 421 (534)
T ss_pred hhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHH------HHHHcCCChhHhh-------
Confidence 776 6899999999997 211 24443332 111 2333 33444 8888888654332
Q ss_pred hhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEE
Q 000845 1139 LVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVL 1215 (1255)
Q Consensus 1139 ~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~ 1215 (1255)
.-...||||||||||||||++-+|++++||||||+||..-...|.+.+++.-+ +-+-++|+|+|..++. ||+|+
T Consensus 422 ---RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~vi 498 (534)
T COG4172 422 ---RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVI 498 (534)
T ss_pred ---cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEE
Confidence 12356999999999999999999999999999999999999999999987653 5699999999999987 99999
Q ss_pred EEeCCEEEEEcChhHHhhcCChHHHHHH
Q 000845 1216 SMSDGKLVEYDEPKKLLRRQDSLFAQLV 1243 (1255)
Q Consensus 1216 vl~~G~ive~G~~~eLl~~~~~~f~~l~ 1243 (1255)
||.+|+|||+|+.+++.++|...|.+-+
T Consensus 499 Vm~~GkiVE~G~~~~if~~P~~~YT~~L 526 (534)
T COG4172 499 VMRDGKIVEQGPTEAVFANPQHEYTRAL 526 (534)
T ss_pred EEeCCEEeeeCCHHHHhcCCCcHHHHHH
Confidence 9999999999999999999988886543
No 49
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.8e-59 Score=594.11 Aligned_cols=497 Identities=19% Similarity=0.226 Sum_probs=403.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 117 ILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTG 196 (1255)
Q Consensus 117 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1255)
.++..++.+++.++...+..++..++.++.|++++.+++.+-.... ....+.++++++++.++..++.....+...+++
T Consensus 144 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (710)
T TIGR03796 144 ALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR-QDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQ 222 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444456667777888888889999999999999999987653322 222334455555566666666666777888899
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000845 197 LKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGLATIATLI 275 (1255)
Q Consensus 197 ~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~ 275 (1255)
.++...+...+|+|.++++.....+.++|+++|.++.| +.+.+++. .+..+....+.+++.+++++..-++.+++.++
T Consensus 223 ~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~ 301 (710)
T TIGR03796 223 IKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIA 301 (710)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998877888999999999998 67877654 44445555555666666666554556677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 276 VMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMV 355 (1255)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 355 (1255)
.+++.+.+..++.+...+..++.++..+++.+.+.|.++++++||.+++|+.+.++..+...++.+...+..........
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (710)
T TIGR03796 302 FAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGV 381 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777888888899999999999999999999999999999999999999999998888777766555554443332
Q ss_pred HHHHHHH--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcch-
Q 000845 356 LFWSSPI--LIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDM- 432 (1255)
Q Consensus 356 ~~~~~~~--~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~- 432 (1255)
+...... .+.+++++.+.+..+.+|.+.++++..++..+..|+..++..+..+.++.++++|+.++++.|+..+...
T Consensus 382 ~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~ 461 (710)
T TIGR03796 382 LPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEE 461 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccc
Confidence 2222222 2344567777778889999999999999999999999999999999999999999999998754322111
Q ss_pred ---hccccc-ccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------
Q 000845 433 ---QQVCSR-AELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------ 502 (1255)
Q Consensus 433 ---~~~~~~-~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------ 502 (1255)
...... .+..+.|+++|++|+|+... +++|+|+||+|++||.++|+|++|||||||+++|+|+++|.+|
T Consensus 462 ~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~-~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg 540 (710)
T TIGR03796 462 EAPAAGSEPSPRLSGYVELRNITFGYSPLE-PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDG 540 (710)
T ss_pred cccccccccCCCCCCeEEEEEEEEecCCCC-CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECC
Confidence 000000 11346799999999998643 5899999999999999999999999999999999999999999
Q ss_pred -------------------------------------------------------cccCCCCCCCccccccCCCcCChHH
Q 000845 503 -------------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQ 527 (1255)
Q Consensus 503 -------------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQ 527 (1255)
+++..+|+|++|.+||+|.+|||||
T Consensus 541 ~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQ 620 (710)
T TIGR03796 541 IPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQ 620 (710)
T ss_pred EeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHH
Confidence 2467899999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhH
Q 000845 528 KQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDH 607 (1255)
Q Consensus 528 kqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~e 607 (1255)
||||+||||++++|+|+||||||||||+++++.+++.+.. .++|+|+||||++.++.||+|++|++|++++.|+|+|
T Consensus 621 rQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~ 697 (710)
T TIGR03796 621 RQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEE 697 (710)
T ss_pred HHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHH
Confidence 9999999999999999999999999999999999876543 5899999999999999999999999999999999999
Q ss_pred HhhcchHHHHHH
Q 000845 608 LLVTSQEFQDLV 619 (1255)
Q Consensus 608 l~~~~~~~~~l~ 619 (1255)
+++.++.|.+++
T Consensus 698 Ll~~~~~y~~l~ 709 (710)
T TIGR03796 698 LWAVGGAYARLI 709 (710)
T ss_pred HHHcCCcHHHHh
Confidence 998877777664
No 50
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1e-61 Score=596.98 Aligned_cols=219 Identities=26% Similarity=0.445 Sum_probs=175.3
Q ss_pred eEEEEEEEEEeCC---CCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEc-CE---eCCCCC--
Q 000845 1003 KVEIYDLQIRYRP---NAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIID-GL---DITTIG-- 1073 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~---~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~id-G~---di~~i~-- 1073 (1255)
-++++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |. ++...+
T Consensus 279 ~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~ 358 (520)
T TIGR03269 279 IIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPD 358 (520)
T ss_pred eEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchh
Confidence 5999999999952 23469999999999999999999999999999999999999999999996 64 334333
Q ss_pred -hHHhhcccEEEccCCccCCC-chhhhcccC-C-CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCC
Q 000845 1074 -LYDLRSNLGIIPQDPTLFSG-SVRYNLDPL-S-QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1074 -~~~lR~~i~~vpQdp~Lf~g-TIr~Nl~~~-~-~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
...+|++|+|+||++.+|.. |+++|+... . .... +++.+ +++.+++.+.- .+........
T Consensus 359 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~------~~~~~~~~~~ 426 (520)
T TIGR03269 359 GRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAVI------TLKMVGFDEEK------AEEILDKYPD 426 (520)
T ss_pred hHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHH------HHHhCCCCCcc------chhhhhCChh
Confidence 23467789999999988875 999999631 1 1111 11222 45555553200 0001122335
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKL 1222 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1222 (1255)
.||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|++
T Consensus 427 ~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i 506 (520)
T TIGR03269 427 ELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKI 506 (520)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 799999999999999999999999999999999999999999998764 27899999999999976 999999999999
Q ss_pred EEEcChhHHhh
Q 000845 1223 VEYDEPKKLLR 1233 (1255)
Q Consensus 1223 ve~G~~~eLl~ 1233 (1255)
++.|+++++.+
T Consensus 507 ~~~g~~~~~~~ 517 (520)
T TIGR03269 507 VKIGDPEEIVE 517 (520)
T ss_pred EEECCHHHHHh
Confidence 99999988764
No 51
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.2e-58 Score=587.23 Aligned_cols=490 Identities=21% Similarity=0.232 Sum_probs=374.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 123 SCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSS 202 (1255)
Q Consensus 123 ~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 202 (1255)
+.+++.++...++.++..++..+.|++++++++.+...... ......++.+++..++..++.....+...+.+.++...
T Consensus 157 ~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 235 (711)
T TIGR00958 157 GRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGP-PALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLR 235 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566677788888999999999999999999988643221 11111111222222223333222223333444555555
Q ss_pred HHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000845 203 LCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGLATIATLIVMILTV 281 (1255)
Q Consensus 203 l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~~~~~~ 281 (1255)
+...+|+|.++.+....++..+|+++|.++.|++.+.+.+. .+..++...+.+++++++++..-++.+++.++.+++..
T Consensus 236 lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~ 315 (711)
T TIGR00958 236 IREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVF 315 (711)
T ss_pred HHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 66778888888887777788999999999999999987654 45556666666666666665543335555566666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 000845 282 LGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVLFWS-- 359 (1255)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~-- 359 (1255)
.+..++.+...+..++..+..++..+...|.++++++||.|++|+.+.+++.+..++-.+..++.....+........
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (711)
T TIGR00958 316 LAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLG 395 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677788888888888899999999999999999999999999999977777665444333322222222221111111
Q ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhcccccc
Q 000845 360 SPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRA 439 (1255)
Q Consensus 360 ~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~ 439 (1255)
....+.++.++.+.+..+.+|++.+++.+.++..+..|+..++..+..+.++.++.+||.+|++.++..+......+ .
T Consensus 396 ~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~--~ 473 (711)
T TIGR00958 396 MLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTLAP--L 473 (711)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCC--C
Confidence 11123345567777778899999999999999999999999999999999999999999999987653221111111 1
Q ss_pred cCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC-----------------
Q 000845 440 ELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG----------------- 502 (1255)
Q Consensus 440 ~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G----------------- 502 (1255)
+..+.|+++|++|+|+.++++++|+|+||++++||.++||||+|||||||+++|+|+++|.+|
T Consensus 474 ~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l 553 (711)
T TIGR00958 474 NLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYL 553 (711)
T ss_pred CCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHH
Confidence 134579999999999876556899999999999999999999999999999999999999998
Q ss_pred --------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHc
Q 000845 503 --------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALY 538 (1255)
Q Consensus 503 --------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly 538 (1255)
+++..+|+|++|.+||+|.+|||||||||+||||++
T Consensus 554 r~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl 633 (711)
T TIGR00958 554 HRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALV 633 (711)
T ss_pred HhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHh
Confidence 245679999999999999999999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHHHHH
Q 000845 539 QDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEFQDL 618 (1255)
Q Consensus 539 ~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~~~l 618 (1255)
++|+|+||||||||||+++++.|.+ ....++||+|+||||++.++.||+|++|++|+|+++|+|+|++++++.|.++
T Consensus 634 ~~p~ILILDEpTSaLD~~te~~i~~---~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 634 RKPRVLILDEATSALDAECEQLLQE---SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQGCYKHL 710 (711)
T ss_pred cCCCEEEEEccccccCHHHHHHHHH---hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCCCchHhc
Confidence 9999999999999999999988876 2234789999999999999999999999999999999999999877766654
No 52
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-61 Score=593.44 Aligned_cols=218 Identities=21% Similarity=0.310 Sum_probs=173.8
Q ss_pred eEEEEEEEEEeCC-CCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-CCCCEEEEcCEeCCCCCh-HHhhc
Q 000845 1003 KVEIYDLQIRYRP-NAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-PTGGKIIIDGLDITTIGL-YDLRS 1079 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~-~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-~~~G~I~idG~di~~i~~-~~lR~ 1079 (1255)
.|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++...+. +..|+
T Consensus 259 ~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~ 338 (506)
T PRK13549 259 ILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQ 338 (506)
T ss_pred eEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHC
Confidence 5999999999952 23459999999999999999999999999999999999998 599999999999875543 34677
Q ss_pred ccEEEccCC---ccCC-CchhhhcccCC--CC------ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1080 NLGIIPQDP---TLFS-GSVRYNLDPLS--QF------TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1080 ~i~~vpQdp---~Lf~-gTIr~Nl~~~~--~~------sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
.++|+||+| .+|. -|+.+|+.... .+ +.++..+ ...++++.+++.+ .........|
T Consensus 339 ~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~----------~~~~~~~~~L 406 (506)
T PRK13549 339 GIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELK--TILESIQRLKVKT----------ASPELAIARL 406 (506)
T ss_pred CCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHH--HHHHHHHhcCccC----------CCcccccccC
Confidence 899999997 3665 59999996321 11 1111100 0001333333310 1122334579
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEE
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1225 (1255)
|||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||++++|++|+++..
T Consensus 407 SgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~ 486 (506)
T PRK13549 407 SGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGD 486 (506)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998753 47899999999999876 999999999999999
Q ss_pred cChhHHh
Q 000845 1226 DEPKKLL 1232 (1255)
Q Consensus 1226 G~~~eLl 1232 (1255)
|+++++.
T Consensus 487 ~~~~~~~ 493 (506)
T PRK13549 487 LINHNLT 493 (506)
T ss_pred eccccCC
Confidence 9988764
No 53
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2e-58 Score=586.37 Aligned_cols=496 Identities=20% Similarity=0.240 Sum_probs=398.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 115 PSILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRL 194 (1255)
Q Consensus 115 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1255)
..+++..++.+++.++...++.++..++.++.|++++.+++.+-... .....+.++++++++.++..++.....+...+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (686)
T TIGR03797 124 RDLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDA-DRSLLVQIALALLAAAVGAAAFQLAQSLAVLR 202 (686)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556556778888888888999999999999999999999775322 12233445555555666666666667778888
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHH-H-HHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000845 195 TGLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFW-F-HQIWSTSLQLCIAVVVVYYSVGLATIA 272 (1255)
Q Consensus 195 ~~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~-~-~~~~~~pl~i~v~~~lL~~~lG~~~l~ 272 (1255)
++.++...+...+|+|.++++....++.++|++++.++ |++.+.+.+.. + ..+...++ +++++++++..-++.+++
T Consensus 203 ~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~li 280 (686)
T TIGR03797 203 LETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIF-ALLNLGLMFYYSWKLALV 280 (686)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988778889999999997 78988876543 2 22333333 344555555554556667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 273 TLIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGY 352 (1255)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~ 352 (1255)
.++++++..++..++.+...+..++.++..+++.+...|.++++++||.++.|+.+.++.++.-++..+...+.......
T Consensus 281 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (686)
T TIGR03797 281 AVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENL 360 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777888889999999999999999999999999999999999999998888777555544444443333333
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 000845 353 YMVLFWSSPIL--IGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNS 430 (1255)
Q Consensus 353 ~~~~~~~~~~~--~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~ 430 (1255)
...+......+ +.+++++.|.+..+.+|.+.++++..++..+..|+..++..+..+.+++++++|+.++++.|+..+.
T Consensus 361 ~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 440 (686)
T TIGR03797 361 LTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDE 440 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 22222222222 3335567777778899999999999999999999999999999999999999999999987542211
Q ss_pred chhcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC--------
Q 000845 431 DMQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG-------- 502 (1255)
Q Consensus 431 ~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G-------- 502 (1255)
.. ..+ .+..+.|+++|++|+|+.+. +++|+|+||+|++||.++|+|++|||||||+++|+|+++|.+|
T Consensus 441 ~~-~~~--~~~~~~I~~~nvsf~Y~~~~-~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~ 516 (686)
T TIGR03797 441 AK-TDP--GKLSGAIEVDRVTFRYRPDG-PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQD 516 (686)
T ss_pred Cc-CCC--CCCCceEEEEEEEEEcCCCC-ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEE
Confidence 10 011 11345799999999997543 5899999999999999999999999999999999999999999
Q ss_pred ----------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHH
Q 000845 503 ----------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQR 530 (1255)
Q Consensus 503 ----------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqR 530 (1255)
+++..+|+|++|.+||+|.+||||||||
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQR 596 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQR 596 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 2467899999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhh
Q 000845 531 IQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 531 IaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
|+||||+|++|+|++||||||+||+++++++.+.+ ..+ ++|+|+||||++.++.||+|++|++|++++.|+|+|+++
T Consensus 597 ialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L-~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 597 LLIARALVRKPRILLFDEATSALDNRTQAIVSESL-ERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMA 673 (686)
T ss_pred HHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999887654 433 689999999999999999999999999999999999998
Q ss_pred cchHHHHHHH
Q 000845 611 TSQEFQDLVN 620 (1255)
Q Consensus 611 ~~~~~~~l~~ 620 (1255)
.++.|.+++.
T Consensus 674 ~~~~y~~l~~ 683 (686)
T TIGR03797 674 REGLFAQLAR 683 (686)
T ss_pred CCcHHHHHHH
Confidence 8888888765
No 54
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-61 Score=590.97 Aligned_cols=212 Identities=19% Similarity=0.339 Sum_probs=169.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh-HHhhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL-YDLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~-~~lR~~i 1081 (1255)
.++++|+++.|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. ..+|+++
T Consensus 265 ~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i 340 (510)
T PRK09700 265 VFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGM 340 (510)
T ss_pred EEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHHCCc
Confidence 599999998763 28999999999999999999999999999999999999999999999999876543 4567899
Q ss_pred EEEccCC---ccCCC-chhhhcccCCCC------------ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCC
Q 000845 1082 GIIPQDP---TLFSG-SVRYNLDPLSQF------------TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1082 ~~vpQdp---~Lf~g-TIr~Nl~~~~~~------------sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
+||||++ .+|+. |+++|+...... ...+..+ ...++++..++. ++..+.. ..
T Consensus 341 ~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~------~~~~~~~----~~ 408 (510)
T PRK09700 341 AYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQR--TAENQRELLALK------CHSVNQN----IT 408 (510)
T ss_pred EEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHH--HHHHHHHhcCCC------CCCccCc----cc
Confidence 9999984 57765 999999742110 1110000 000133333331 0122333 35
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLV 1223 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv 1223 (1255)
.||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|+++
T Consensus 409 ~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 488 (510)
T PRK09700 409 ELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLT 488 (510)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEE
Confidence 799999999999999999999999999999999999999999998753 47899999999998865 9999999999999
Q ss_pred EEcChhH
Q 000845 1224 EYDEPKK 1230 (1255)
Q Consensus 1224 e~G~~~e 1230 (1255)
+.+++.+
T Consensus 489 ~~~~~~~ 495 (510)
T PRK09700 489 QILTNRD 495 (510)
T ss_pred EEecCcc
Confidence 9987644
No 55
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=7.4e-60 Score=628.19 Aligned_cols=251 Identities=18% Similarity=0.296 Sum_probs=195.5
Q ss_pred HHhhhhhHHHHHHHHh--cCCCCCcccccCCCCCCCCCCCc--eEEEEEEEEEeC--CCCCceeeeeeEEEeCCcEEEEE
Q 000845 964 IVGNLIVSVERLNQYM--RIPSEAPELVQKNSPAPDWPPTG--KVEIYDLQIRYR--PNAPLVLRGITCTFEGGHKIGVV 1037 (1255)
Q Consensus 964 ~~~~~~~s~~Ri~~~~--~~~~e~~~~~~~~~~~~~~p~~g--~I~~~nvs~~Y~--~~~~~vL~~is~~I~~Ge~vaIv 1037 (1255)
..+..+.++||..++. +.+.|.+.......++. ..| .++++||+++|+ ++.+.+|+|||++|+|||++||+
T Consensus 719 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~ 795 (1394)
T TIGR00956 719 TSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALM 795 (1394)
T ss_pred ccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEE
Confidence 4455567778877652 23323222111111111 133 479999999995 33457999999999999999999
Q ss_pred cCCCCcHHHHHHHHhccCC---CCCCEEEEcCEeCCCCChHHhhcccEEEccCCc-cCCCchhhhcccC------CCCCh
Q 000845 1038 GRTGSGKTTLISALFRLVE---PTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPT-LFSGSVRYNLDPL------SQFTD 1107 (1255)
Q Consensus 1038 G~sGsGKSTLl~lL~rl~~---~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~-Lf~gTIr~Nl~~~------~~~sd 1107 (1255)
||||||||||+++|.|+.+ |++|+|.+||.++. ..+|++++||||++. ++..|+||||++. ...++
T Consensus 796 G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~ 871 (1394)
T TIGR00956 796 GASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSK 871 (1394)
T ss_pred CCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCH
Confidence 9999999999999999997 78999999999985 257899999999876 4567999999742 12344
Q ss_pred HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCC-eEEEecCCCCCCHHHHHHHH
Q 000845 1108 QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQ-ILVLDEATASIDNATDSILQ 1186 (1255)
Q Consensus 1108 ~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~-ILiLDE~TS~LD~~te~~i~ 1186 (1255)
++.++ ...++++..++.+ -.|+.+++.|.+||||||||++|||||+.+|+ ||+||||||+||+.+...|+
T Consensus 872 ~~~~~--~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~ 942 (1394)
T TIGR00956 872 SEKME--YVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSIC 942 (1394)
T ss_pred HHHHH--HHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHH
Confidence 43322 0112666666543 36888998888999999999999999999997 99999999999999999999
Q ss_pred HHHHHH-cCCcEEEEeccCchhh--hhcCEEEEEeCC-EEEEEcChhH
Q 000845 1187 NTIRRE-FANCTVITVAHRIATV--MDCNMVLSMSDG-KLVEYDEPKK 1230 (1255)
Q Consensus 1187 ~~l~~~-~~~~TvI~IaHrl~ti--~~~DrI~vl~~G-~ive~G~~~e 1230 (1255)
+.|++. .+++|||+++|+++.. ..||+|++|++| +++++|++.+
T Consensus 943 ~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 943 KLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 999987 4689999999999974 469999999997 9999999743
No 56
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.1e-58 Score=585.40 Aligned_cols=489 Identities=22% Similarity=0.272 Sum_probs=395.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 115 PSILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRL 194 (1255)
Q Consensus 115 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1255)
...++..++.+++.+....++.++..++.++.|++++.+++.+-... .....+.++++++++.++.+++.....+...+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 135 KHWFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQ-AFETLWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455566778888888888889999999999999999999765322 12223334445555555666666666777888
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000845 195 TGLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFW--FHQIWSTSLQLCIAVVVVYYSVGLATIA 272 (1255)
Q Consensus 195 ~~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~--~~~~~~~pl~i~v~~~lL~~~lG~~~l~ 272 (1255)
.+.++...+...+|+|.++++... .+.++|++++.+ .|++.+.+.+.. +..+...+. +++.++++++.-++.+++
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPF-ALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHH-HHHHHHHHHHHHhHHHHH
Confidence 999999999999999999998765 567899999999 799999987543 223333333 344444555544557777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 273 TLIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGY 352 (1255)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~ 352 (1255)
.++++++.+.+..++.+...+..++.++..+++.+.+.|.++++++||.+++|+.+.++..+..++..+...+.......
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777888888999999999999999999999999999999999999999999999988777776666665555544
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 000845 353 YMVLFWSSPI--LIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNS 430 (1255)
Q Consensus 353 ~~~~~~~~~~--~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~ 430 (1255)
...+...... .+.+++++.+.+.++.+|++.++.++.++..+..|+..++..+..+.+++++++|+.++++.|+..+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 3333222222 23345677777778899999999999999999999999999999999999999999999987653221
Q ss_pred chhcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC--------
Q 000845 431 DMQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG-------- 502 (1255)
Q Consensus 431 ~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G-------- 502 (1255)
.....+ ..+..+.|+++|++|+|+.. ++++|+|+||+|++||.++|+|++|||||||+++|+|+++|.+|
T Consensus 451 ~~~~~~-~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~ 528 (694)
T TIGR03375 451 GTRFLH-RPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVD 528 (694)
T ss_pred CCCCCC-CCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEE
Confidence 111000 11134579999999999754 35799999999999999999999999999999999999999998
Q ss_pred -----------------------------------------------------cccCCCCCCCccccccCCCcCChHHHH
Q 000845 503 -----------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQ 529 (1255)
Q Consensus 503 -----------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkq 529 (1255)
+++..+|+|++|.+||+|.+|||||||
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQ 608 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQ 608 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHH
Confidence 246789999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHh
Q 000845 530 RIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLL 609 (1255)
Q Consensus 530 RIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~ 609 (1255)
|++||||++++|+|+|||||||+||+++++.|.+ .+....+++|+|+||||++.++.||+|++|++|++++.|+|+|++
T Consensus 609 RlalARall~~p~iliLDE~Ts~LD~~te~~i~~-~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl 687 (694)
T TIGR03375 609 AVALARALLRDPPILLLDEPTSAMDNRSEERFKD-RLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVL 687 (694)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 9999999999999999999999999999988864 566677899999999999999999999999999999999999987
Q ss_pred h
Q 000845 610 V 610 (1255)
Q Consensus 610 ~ 610 (1255)
+
T Consensus 688 ~ 688 (694)
T TIGR03375 688 E 688 (694)
T ss_pred H
Confidence 5
No 57
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.2e-58 Score=618.97 Aligned_cols=527 Identities=18% Similarity=0.197 Sum_probs=393.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcC----CCCCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000845 695 FAYLIFLVAQILQSLWIATYIP----STSISR--LKLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFR 768 (1255)
Q Consensus 695 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~ 768 (1255)
+..++..++.++.|+.+...++ ...... ..+++.++++.++..++.....+.....+.++...+...+|+++++
T Consensus 324 ~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~ 403 (1522)
T TIGR00957 324 CFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALV 403 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445556666677776664332 111111 1122222333333334433344456778889999999999999999
Q ss_pred CCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 769 APMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAK 848 (1255)
Q Consensus 769 ~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r 848 (1255)
.|..++++.++|+++|+++.|++.+.... ..+..+....+.++++++++.....+.+++.+.++++++.+..++.+..+
T Consensus 404 l~~~~~~~~~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~ 482 (1522)
T TIGR00957 404 ITNSARKSSTVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTK 482 (1522)
T ss_pred CChhhcCCCCHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988744 34555555555555555444333222223333333444455555556666
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 849 ELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALCT 928 (1255)
Q Consensus 849 ~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 928 (1255)
..++...+......+.+.|.++|+++||.|++|+.+.+++.+..++..+..........+.... .....+++.++.+..
T Consensus 483 ~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~f~~ 561 (1522)
T TIGR00957 483 TYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFT-WVCTPFLVALITFAV 561 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 6777777788888899999999999999999999999998887776655433322222221111 111111111111111
Q ss_pred HHhc--cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCC-CCceEE
Q 000845 929 TLLH--KGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWP-PTGKVE 1005 (1255)
Q Consensus 929 ~~~~--~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p-~~g~I~ 1005 (1255)
+... .+.++++.+-.++++...+..++..+...+..+.....|.+|+.++++.+++++..... ....+ ..+.|+
T Consensus 562 ~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~---~~~~~~~~~~i~ 638 (1522)
T TIGR00957 562 YVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIER---RTIKPGEGNSIT 638 (1522)
T ss_pred HHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccc---cccCCCCCCcEE
Confidence 2221 23456666666666666677888888889999999999999999999765443211100 01111 124799
Q ss_pred EEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEc
Q 000845 1006 IYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIP 1085 (1255)
Q Consensus 1006 ~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vp 1085 (1255)
++|++|+|+++.+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+|| +|+|||
T Consensus 639 ~~~~~~~~~~~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~yv~ 705 (1522)
T TIGR00957 639 VHNATFTWARDLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG-------------SVAYVP 705 (1522)
T ss_pred EEEeEEEcCCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------------EEEEEc
Confidence 9999999975556799999999999999999999999999999999999999999999997 599999
Q ss_pred cCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCC
Q 000845 1086 QDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRR 1165 (1255)
Q Consensus 1086 Qdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~ 1165 (1255)
|+|.+|++||||||.+..++++++..+ +++.|++.+++..+|+|++|.+|++|.+||||||||++||||++++|
T Consensus 706 Q~~~l~~~Ti~eNI~~g~~~~~~~~~~------~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~ 779 (1522)
T TIGR00957 706 QQAWIQNDSLRENILFGKALNEKYYQQ------VLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNA 779 (1522)
T ss_pred CCccccCCcHHHHhhcCCccCHHHHHH------HHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999766666666665 89999999999999999999999999999999999999999999999
Q ss_pred CeEEEecCCCCCCHHHHHHHHHHHHH---HcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHH
Q 000845 1166 QILVLDEATASIDNATDSILQNTIRR---EFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQL 1242 (1255)
Q Consensus 1166 ~ILiLDE~TS~LD~~te~~i~~~l~~---~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l 1242 (1255)
+|+|||||||+||+++++.|.+.+.+ ..+++|+|+|||+++.+..||+|++|++|+|++.|+|++++++ ++.|+++
T Consensus 780 ~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~~~~l 858 (1522)
T TIGR00957 780 DIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQR-DGAFAEF 858 (1522)
T ss_pred CEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhc-chhHHHH
Confidence 99999999999999999999998863 4578999999999999999999999999999999999999975 7889988
Q ss_pred HHHH
Q 000845 1243 VKEY 1246 (1255)
Q Consensus 1243 ~~~~ 1246 (1255)
++.+
T Consensus 859 ~~~~ 862 (1522)
T TIGR00957 859 LRTY 862 (1522)
T ss_pred HHhh
Confidence 8744
No 58
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=7.4e-61 Score=586.04 Aligned_cols=212 Identities=21% Similarity=0.335 Sum_probs=170.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH-hhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD-LRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~-lR~~i 1081 (1255)
-|+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+... .|++|
T Consensus 268 ~l~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 340 (510)
T PRK15439 268 VLTVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGL 340 (510)
T ss_pred eEEEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCc
Confidence 589999983 1699999999999999999999999999999999999999999999999998776654 46789
Q ss_pred EEEccCC---ccCCC-chhhhcccC--C--C-C-ChHHHHhccCchhHHHhccHHHHHHhhhcCcc-chhcCCCCCCChh
Q 000845 1082 GIIPQDP---TLFSG-SVRYNLDPL--S--Q-F-TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLD-SLVVQDGANWSMG 1150 (1255)
Q Consensus 1082 ~~vpQdp---~Lf~g-TIr~Nl~~~--~--~-~-sd~ei~~~~~~~~al~~~~l~~~i~~lp~gld-t~v~e~G~~LSgG 1150 (1255)
+|+||++ .+|.. |+.+|+... . . . ...+.. ..+.+.+..+ |++ .........||||
T Consensus 341 ~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~--~l~~~~~~~~~~~LSgG 407 (510)
T PRK15439 341 VYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAREN-----------AVLERYRRAL--NIKFNHAEQAARTLSGG 407 (510)
T ss_pred EECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHH-----------HHHHHHHHHc--CCCCCCccCccccCCcH
Confidence 9999996 36654 999998531 1 0 0 111111 1112223222 232 2233334579999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcCh
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1228 (1255)
||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|+++..|++
T Consensus 408 ~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~ 487 (510)
T PRK15439 408 NQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTG 487 (510)
T ss_pred HHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEcc
Confidence 9999999999999999999999999999999999999998764 47899999999999976 999999999999999999
Q ss_pred hHHhhc
Q 000845 1229 KKLLRR 1234 (1255)
Q Consensus 1229 ~eLl~~ 1234 (1255)
+++..+
T Consensus 488 ~~~~~~ 493 (510)
T PRK15439 488 AAINVD 493 (510)
T ss_pred ccCCHH
Confidence 887643
No 59
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-59 Score=579.44 Aligned_cols=201 Identities=20% Similarity=0.328 Sum_probs=169.8
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
..|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++| ++++
T Consensus 318 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 36999999999953 4599999999999999999999999999999999999999999999987 3579
Q ss_pred EEEccCCc--cCC-CchhhhcccCC--CCChHHHHhccCchhHHHhccHH-HHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1082 GIIPQDPT--LFS-GSVRYNLDPLS--QFTDQEIWEVTIPSQVLEKCQLR-EVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1082 ~~vpQdp~--Lf~-gTIr~Nl~~~~--~~sd~ei~~~~~~~~al~~~~l~-~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+|+||++. ++. .|+++|+..+. ...++++.+ +++..++. +.. + ....+||||||||+
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~-------~----~~~~~LSgGq~qrv 447 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRG------TLGRLLFSQDDI-------K----KSVKVLSGGEKGRM 447 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHH------HHHHcCCChhHh-------c----CcccccCHHHHHHH
Confidence 99999984 443 59999986432 122333444 66776662 222 2 23357999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEE-EEcChhHHhh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLV-EYDEPKKLLR 1233 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv-e~G~~~eLl~ 1233 (1255)
+||||++++|+||||||||++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||+|++|++|+++ ..|++.++++
T Consensus 448 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~ 525 (530)
T PRK15064 448 LFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLR 525 (530)
T ss_pred HHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHH
Confidence 9999999999999999999999999999999999875 4699999999999876 9999999999998 7899988875
Q ss_pred c
Q 000845 1234 R 1234 (1255)
Q Consensus 1234 ~ 1234 (1255)
.
T Consensus 526 ~ 526 (530)
T PRK15064 526 S 526 (530)
T ss_pred H
Confidence 4
No 60
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.9e-58 Score=606.07 Aligned_cols=220 Identities=20% Similarity=0.272 Sum_probs=187.0
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
..|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++.+ +....|++|
T Consensus 1936 ~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~I 2014 (2272)
T TIGR01257 1936 DILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQNM 2014 (2272)
T ss_pred ceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhhE
Confidence 4699999999996433569999999999999999999999999999999999999999999999999965 456688999
Q ss_pred EEEccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
||+||++.++.. |++|||..+. ..+.+++.+ ...++++.+++.++.++. ...||||||||++|
T Consensus 2015 Gy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~--~v~~lLe~lgL~~~~dk~-----------~~~LSGGqKqRLsl 2081 (2272)
T TIGR01257 2015 GYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEK--VANWSIQSLGLSLYADRL-----------AGTYSGGNKRKLST 2081 (2272)
T ss_pred EEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcCCHHHhcCC-----------hhhCCHHHHHHHHH
Confidence 999999998865 9999996432 122222221 001267777776654332 24699999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcC
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
||||+.+|+||+|||||++||+.+.+.+++.|++.. +++|||++||+++.+.. ||||++|++|++++.|++++|.++-
T Consensus 2082 A~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~~ 2161 (2272)
T TIGR01257 2082 AIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKF 2161 (2272)
T ss_pred HHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHHh
Confidence 999999999999999999999999999999998863 57999999999999976 9999999999999999999997653
No 61
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.3e-57 Score=578.66 Aligned_cols=493 Identities=21% Similarity=0.235 Sum_probs=388.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 118 LRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGL 197 (1255)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1255)
+...++.+++.++...+..++..++.++.|++++.+++.+-... .....+.++++++++.++..++.....+...+++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (708)
T TIGR01193 147 FIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHK-MMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQ 225 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445567777888888888999999999999999998765322 12222334444455555566666666677788888
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000845 198 KIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFW-FHQIWSTSLQLCIAVVVVYYSVGLATIATLIV 276 (1255)
Q Consensus 198 ~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~ 276 (1255)
++...+...+|+|.++++....++.++|+++|.++ |++.+.+.+.. ........+.+++.+.++++.-++.+++.+++
T Consensus 226 ~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 304 (708)
T TIGR01193 226 RLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLSLLS 304 (708)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999988878889999999998 99998876542 22222223333444444444434456666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHH----HH
Q 000845 277 MILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQK----GY 352 (1255)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~----~~ 352 (1255)
+++...+..++.+...+..++.++..+++.+...|.++++++||.+++|+.+.++.++...+..+...+..... .+
T Consensus 305 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (708)
T TIGR01193 305 IPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAI 384 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777788888999999999999999999999999999999999999988887765544443333322222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcch
Q 000845 353 YMVLFWSSPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDM 432 (1255)
Q Consensus 353 ~~~~~~~~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 432 (1255)
..++.... .+.+++++.+.+..+.+|++.++++..++..+..|+..+...+..+.+++++++|+.++++.|+..+...
T Consensus 385 ~~~~~~~~--~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~ 462 (708)
T TIGR01193 385 KAVTKLIL--NVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKK 462 (708)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 22222222 2445667888888899999999999999999999999999999999999999999999998754322111
Q ss_pred hcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC----------
Q 000845 433 QQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG---------- 502 (1255)
Q Consensus 433 ~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G---------- 502 (1255)
...+. .+..+.|+++|++|+|+.+ +++|+|+||+|++|+.++|+|++|||||||+++|+|.++|.+|
T Consensus 463 ~~~~~-~~~~~~I~~~~vsf~y~~~--~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~ 539 (708)
T TIGR01193 463 KRTEL-NNLNGDIVINDVSYSYGYG--SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLK 539 (708)
T ss_pred cccCC-CCCCCcEEEEEEEEEcCCC--CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHH
Confidence 00111 1134679999999999743 4799999999999999999999999999999999999999998
Q ss_pred ----------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHH
Q 000845 503 ----------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQR 530 (1255)
Q Consensus 503 ----------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqR 530 (1255)
+++..+|+|++|.|||+|.+||||||||
T Consensus 540 ~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQR 619 (708)
T TIGR01193 540 DIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQR 619 (708)
T ss_pred HcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHH
Confidence 2356789999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhh
Q 000845 531 IQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 531 IaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
|+||||++++|+|+|||||||+||+++++++.+.+. .. +++|+|+||||++.+..||+|++|++|++++.|+|+|+++
T Consensus 620 ialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~-~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~ 697 (708)
T TIGR01193 620 IALARALLTDSKVLILDESTSNLDTITEKKIVNNLL-NL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLD 697 (708)
T ss_pred HHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHH-Hh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999999999999988876554 43 7899999999999999999999999999999999999998
Q ss_pred cchHHHHHH
Q 000845 611 TSQEFQDLV 619 (1255)
Q Consensus 611 ~~~~~~~l~ 619 (1255)
..+.|.+++
T Consensus 698 ~~~~y~~l~ 706 (708)
T TIGR01193 698 RNGFYASLI 706 (708)
T ss_pred cCCcHHHHh
Confidence 877787765
No 62
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-60 Score=583.87 Aligned_cols=212 Identities=20% Similarity=0.315 Sum_probs=169.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh-HHhhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL-YDLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~-~~lR~~i 1081 (1255)
.++++|++++ .+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ...|+.+
T Consensus 257 ~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 330 (501)
T PRK11288 257 RLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGI 330 (501)
T ss_pred EEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCC
Confidence 5899999842 38999999999999999999999999999999999999999999999999875433 4567899
Q ss_pred EEEccCCc---cCC-CchhhhcccCCC--C-------ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1082 GIIPQDPT---LFS-GSVRYNLDPLSQ--F-------TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1082 ~~vpQdp~---Lf~-gTIr~Nl~~~~~--~-------sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
+|+||+|. +|. .|+.+|+..... . ...+-.+ ...+.++..++. ++-.++. ..+||
T Consensus 331 ~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~------~~~~~~~----~~~LS 398 (501)
T PRK11288 331 MLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAE--NADRFIRSLNIK------TPSREQL----IMNLS 398 (501)
T ss_pred EEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHH--HHHHHHHhcCcc------cCCccCc----cccCC
Confidence 99999973 554 699999864211 0 1100000 000133333331 0112333 35799
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
||||||++||||++.+|++|||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 399 gGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~ 478 (501)
T PRK11288 399 GGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGEL 478 (501)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEE
Confidence 999999999999999999999999999999999999999998764 47899999999999976 9999999999999999
Q ss_pred ChhHHh
Q 000845 1227 EPKKLL 1232 (1255)
Q Consensus 1227 ~~~eLl 1232 (1255)
+++|..
T Consensus 479 ~~~~~~ 484 (501)
T PRK11288 479 AREQAT 484 (501)
T ss_pred ccccCC
Confidence 988754
No 63
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.3e-60 Score=583.91 Aligned_cols=211 Identities=20% Similarity=0.318 Sum_probs=170.2
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh-HHhhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL-YDLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~-~~lR~~i 1081 (1255)
.|+++|+++ .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. +.+|+++
T Consensus 257 ~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i 329 (501)
T PRK10762 257 RLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGI 329 (501)
T ss_pred EEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCC
Confidence 589999984 27999999999999999999999999999999999999999999999999987665 3467889
Q ss_pred EEEccCC---ccCC-CchhhhcccCCC---------CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1082 GIIPQDP---TLFS-GSVRYNLDPLSQ---------FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1082 ~~vpQdp---~Lf~-gTIr~Nl~~~~~---------~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
+||||+| .+|. -|+++|+..... .+.++..+ ...++++.+++. +.........||
T Consensus 330 ~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~----------~~~~~~~~~~LS 397 (501)
T PRK10762 330 VYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQ--AVSDFIRLFNIK----------TPSMEQAIGLLS 397 (501)
T ss_pred EEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHH--HHHHHHHhcCCC----------CCCccCchhhCC
Confidence 9999997 3554 599999964210 11111100 000133333321 112333445799
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 398 gGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~ 477 (501)
T PRK10762 398 GGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEF 477 (501)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEe
Confidence 999999999999999999999999999999999999999998864 47899999999999876 9999999999999999
Q ss_pred ChhHHh
Q 000845 1227 EPKKLL 1232 (1255)
Q Consensus 1227 ~~~eLl 1232 (1255)
+++++.
T Consensus 478 ~~~~~~ 483 (501)
T PRK10762 478 TREQAT 483 (501)
T ss_pred ccccCC
Confidence 988763
No 64
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.1e-58 Score=578.16 Aligned_cols=488 Identities=22% Similarity=0.266 Sum_probs=383.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHH
Q 000845 736 MMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTF 815 (1255)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~ 815 (1255)
..++.-...+.....+.++-..+-..++++.++.+-.--..++.|+++|-++.|.+.+++..... ..+....+.++.++
T Consensus 255 ~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~-h~~w~~Plqi~~~l 333 (1381)
T KOG0054|consen 255 QSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFL-HLLWSAPLQIILAL 333 (1381)
T ss_pred HHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 33333333444567777777777788888999888877778899999999999999999865443 33333444444444
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHH
Q 000845 816 VVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAY 895 (1255)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~ 895 (1255)
.++...--+-+++.+.++++++.++.+..+..+..++.....+.......+|.++|+++||.|+||+.|.++..+..++.
T Consensus 334 ~lLy~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~E 413 (1381)
T KOG0054|consen 334 YLLYGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKE 413 (1381)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHH
Confidence 44433222223344446666677777888888888888888888899999999999999999999999999998888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 000845 896 ASSFFHSFTAREWLIQRLETLSAIVLATSALCTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERL 975 (1255)
Q Consensus 896 ~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri 975 (1255)
.+........+............++.+++....++...+..++..+-.++++.-.+..++..+......+-+..+|++|+
T Consensus 414 l~~lrk~~~~~~~~~~~~~~~p~lv~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri 493 (1381)
T KOG0054|consen 414 LKLLRKSAYLSALNSFLNFFSPVLVSVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRL 493 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655555544444433333333333332222222334455555555556666666666666777777778889999999
Q ss_pred HHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhcc
Q 000845 976 NQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRL 1054 (1255)
Q Consensus 976 ~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl 1054 (1255)
.+|+..++..+..... .+.-+....|+++|.+|++.++ .++.|+||||+|++|+.+||||++|||||||+++|+|-
T Consensus 494 ~~fl~~~e~~~~~~~~---~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGE 570 (1381)
T KOG0054|consen 494 KEFLLSEELDPDSVER---SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGE 570 (1381)
T ss_pred HHHhcCcccCcccccc---CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 9999765443322111 1112334579999999999763 34599999999999999999999999999999999999
Q ss_pred CCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhc
Q 000845 1055 VEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKE 1134 (1255)
Q Consensus 1055 ~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~ 1134 (1255)
++..+|++.++|. ++||||.|++|+|||||||.++.+++++...+ +++.|+|.+.++.+|.
T Consensus 571 m~~~sG~v~v~gs-------------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~------Vi~aC~L~~Dle~Lp~ 631 (1381)
T KOG0054|consen 571 MPKLSGSVAVNGS-------------VAYVPQQPWIQNGTVRENILFGSPYDEERYDK------VIKACALKKDLEILPF 631 (1381)
T ss_pred cccccceEEEcCe-------------EEEeccccHhhCCcHHHhhhcCccccHHHHHH------HHHHccCHhHHhhcCC
Confidence 9999999999884 99999999999999999999888888777766 9999999999999999
Q ss_pred CccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHH-HHHHHHHcCCcEEEEeccCchhhhhcCE
Q 000845 1135 GLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSIL-QNTIRREFANCTVITVAHRIATVMDCNM 1213 (1255)
Q Consensus 1135 gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i-~~~l~~~~~~~TvI~IaHrl~ti~~~Dr 1213 (1255)
|-.|.|||+|.||||||||||+||||+.++++|++||.|.|++|.++.+.| ++.|+...+++|+|.|||.++.+.+||.
T Consensus 632 GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~ 711 (1381)
T KOG0054|consen 632 GDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQ 711 (1381)
T ss_pred CCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCE
Confidence 999999999999999999999999999999999999999999999998875 6677777889999999999999999999
Q ss_pred EEEEeCCEEEEEcChhHHhhcCChHHHHHHHHHH
Q 000845 1214 VLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1214 I~vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
|+||++|+|+|.|+|+||++. ++.|.++.++..
T Consensus 712 Iivl~~G~I~~~Gty~el~~~-~~~~~~l~~~~~ 744 (1381)
T KOG0054|consen 712 IIVLKDGKIVESGTYEELLKS-GGDFAELAHEEE 744 (1381)
T ss_pred EEEecCCeEecccCHHHHHhc-chhHHHHhhccc
Confidence 999999999999999999975 788988865543
No 65
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=4e-60 Score=579.04 Aligned_cols=207 Identities=17% Similarity=0.259 Sum_probs=164.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-CCCEEEEcCEeCCC-CChHHhhcc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-TGGKIIIDGLDITT-IGLYDLRSN 1080 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-~~G~I~idG~di~~-i~~~~lR~~ 1080 (1255)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.++ ++|+|.++|.++.. .+....|++
T Consensus 260 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 337 (490)
T PRK10938 260 RIVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKH 337 (490)
T ss_pred eEEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhh
Confidence 5999999999953 3599999999999999999999999999999999998876 69999999987632 233456889
Q ss_pred cEEEccCCccCC---CchhhhcccC--C------CCCh---HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1081 LGIIPQDPTLFS---GSVRYNLDPL--S------QFTD---QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1081 i~~vpQdp~Lf~---gTIr~Nl~~~--~------~~sd---~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
|+|+||++.++. .|+++++.+. . .... +++.+ +++.+++.+. ........
T Consensus 338 i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~----------~~~~~~~~ 401 (490)
T PRK10938 338 IGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQ------WLDILGIDKR----------TADAPFHS 401 (490)
T ss_pred ceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHH------HHHHcCCchh----------hccCchhh
Confidence 999999987643 3677775421 1 0111 12222 5555555430 12222357
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC-C-cEEEEeccCchhhhh--cCEEEEEeCCEE
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA-N-CTVITVAHRIATVMD--CNMVLSMSDGKL 1222 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~-~-~TvI~IaHrl~ti~~--~DrI~vl~~G~i 1222 (1255)
||||||||++||||++++|+||||||||++||+++.+.+.+.|++..+ + .|||+|||+++.+.. ||+|++|++|+|
T Consensus 402 LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i 481 (490)
T PRK10938 402 LSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDI 481 (490)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCce
Confidence 999999999999999999999999999999999999999999988653 3 479999999999974 799999999999
Q ss_pred EEEcC
Q 000845 1223 VEYDE 1227 (1255)
Q Consensus 1223 ve~G~ 1227 (1255)
++.-+
T Consensus 482 ~~~~~ 486 (490)
T PRK10938 482 YRYVQ 486 (490)
T ss_pred EEeec
Confidence 87643
No 66
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=5.7e-60 Score=579.19 Aligned_cols=217 Identities=21% Similarity=0.308 Sum_probs=171.4
Q ss_pred eEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-CCCEEEEcCEeCCCCCh-HHhhc
Q 000845 1003 KVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-TGGKIIIDGLDITTIGL-YDLRS 1079 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-~~G~I~idG~di~~i~~-~~lR~ 1079 (1255)
-++++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+. ..+|+
T Consensus 257 ~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~ 336 (500)
T TIGR02633 257 ILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRA 336 (500)
T ss_pred eEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 59999999999432 23599999999999999999999999999999999999995 89999999999865443 56788
Q ss_pred ccEEEccCC---ccCC-CchhhhcccCC--CC------ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1080 NLGIIPQDP---TLFS-GSVRYNLDPLS--QF------TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1080 ~i~~vpQdp---~Lf~-gTIr~Nl~~~~--~~------sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
+++|+||++ .+|. -|+++|+.... .. ..++..+ ...++++..++.+ .-.+.. ...|
T Consensus 337 ~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~------~~~~~~----~~~L 404 (500)
T TIGR02633 337 GIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQ--IIGSAIQRLKVKT------ASPFLP----IGRL 404 (500)
T ss_pred CCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHH--HHHHHHHhcCccC------CCccCc----cccC
Confidence 999999996 3665 49999997421 00 1111000 0001344443310 012333 3579
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEE
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1225 (1255)
|||||||++||||++++|++|||||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||+|++|++|+++..
T Consensus 405 SgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~ 484 (500)
T TIGR02633 405 SGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGD 484 (500)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999988754 47899999999999976 999999999999988
Q ss_pred cChhHH
Q 000845 1226 DEPKKL 1231 (1255)
Q Consensus 1226 G~~~eL 1231 (1255)
++..++
T Consensus 485 ~~~~~~ 490 (500)
T TIGR02633 485 FVNHAL 490 (500)
T ss_pred EccccC
Confidence 765543
No 67
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.5e-56 Score=560.72 Aligned_cols=498 Identities=16% Similarity=0.205 Sum_probs=388.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 118 LRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGL 197 (1255)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1255)
+..+++.+++.++...+..++..++..+.|++++.+++.+....... ....++..++++.++..++.....+...+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 94 (582)
T PRK11176 16 LWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRS-VLKWMPLVVIGLMILRGITSFISSYCISWVSG 94 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455667777777777777888888888999999988765432111 11112222333444444555555566677888
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000845 198 KIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGLATIATLIV 276 (1255)
Q Consensus 198 ~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~ 276 (1255)
++...+...+|+|.++++.....+.++|++++.++.|++.+.+... .+..++..++.+++.+.++++.-++.+++.+++
T Consensus 95 ~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~ 174 (582)
T PRK11176 95 KVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVI 174 (582)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999998888888999999999999999987543 455566667777777766665544456666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 277 MILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVL 356 (1255)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~ 356 (1255)
+++.+.+..++.+...+..++.++..++..+...|.++|+++||.|++|+.+.++.++.-++-.+...+..........+
T Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (582)
T PRK11176 175 APIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPI 254 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666667788888888899999999999999999999999999999999888887764444333333322222222211
Q ss_pred HHHHH--HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhc
Q 000845 357 FWSSP--ILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQ 434 (1255)
Q Consensus 357 ~~~~~--~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~ 434 (1255)
..... ..+.++.++.+....+.++++.+...+.++..+..|+..+...+..+.+++.+++|+.++++.++..+.....
T Consensus 255 ~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~ 334 (582)
T PRK11176 255 IQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKRV 334 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCcC
Confidence 11111 2233345566666678899999998888888999999999999999999999999999999876432211100
Q ss_pred ccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------------
Q 000845 435 VCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------------ 502 (1255)
Q Consensus 435 ~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------------ 502 (1255)
. .+..+.|+++|++|+|+.. ++++|+|+||+|++||.++|+|++|||||||+++|+|+++|.+|
T Consensus 335 -~--~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~ 410 (582)
T PRK11176 335 -I--ERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDY 410 (582)
T ss_pred -C--CCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhc
Confidence 1 1133469999999999754 35899999999999999999999999999999999999999988
Q ss_pred --------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHH
Q 000845 503 --------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQ 532 (1255)
Q Consensus 503 --------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIa 532 (1255)
++++.+|+|.+|.+||+|.+|||||||||+
T Consensus 411 ~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~ 490 (582)
T PRK11176 411 TLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIA 490 (582)
T ss_pred CHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHH
Confidence 135679999999999999999999999999
Q ss_pred HHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcc
Q 000845 533 LARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTS 612 (1255)
Q Consensus 533 LARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~ 612 (1255)
||||+|++|+|+||||||||||+.+++.+++. +..+.+++|+|+||||++.++.||+|++|++|++++.|+|+++++.+
T Consensus 491 LARall~~~~ililDEptsaLD~~t~~~i~~~-l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~ 569 (582)
T PRK11176 491 IARALLRDSPILILDEATSALDTESERAIQAA-LDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQN 569 (582)
T ss_pred HHHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCC
Confidence 99999999999999999999999999888654 45556789999999999999999999999999999999999999888
Q ss_pred hHHHHHHHH
Q 000845 613 QEFQDLVNA 621 (1255)
Q Consensus 613 ~~~~~l~~~ 621 (1255)
+.|.+++..
T Consensus 570 ~~y~~l~~~ 578 (582)
T PRK11176 570 GVYAQLHKM 578 (582)
T ss_pred ChHHHHHHH
Confidence 888888754
No 68
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-59 Score=572.69 Aligned_cols=212 Identities=18% Similarity=0.326 Sum_probs=167.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChH-Hhhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLY-DLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~-~lR~~i 1081 (1255)
.|+++|++++| +.+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.+
T Consensus 250 ~i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 325 (491)
T PRK10982 250 ILEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGF 325 (491)
T ss_pred EEEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCC
Confidence 59999999975 2499999999999999999999999999999999999999999999999999876654 357789
Q ss_pred EEEccCCc---cCC-Cchhhhc-----ccCCC----CChHHHHhccCchhHHHhccHHHHHHhhhcCcc-chhcCCCCCC
Q 000845 1082 GIIPQDPT---LFS-GSVRYNL-----DPLSQ----FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLD-SLVVQDGANW 1147 (1255)
Q Consensus 1082 ~~vpQdp~---Lf~-gTIr~Nl-----~~~~~----~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gld-t~v~e~G~~L 1147 (1255)
+|+||++. +|. .|+++|. ..... .+.++..+ ...+.+..+ |+. -.......+|
T Consensus 326 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~--~l~~~~~~~~~~~L 392 (491)
T PRK10982 326 ALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKS-----------DTQWVIDSM--RVKTPGHRTQIGSL 392 (491)
T ss_pred EEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHH-----------HHHHHHHhc--CccCCCcccccccC
Confidence 99999963 565 4676663 21100 11111111 112223322 221 1123344579
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEE
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1225 (1255)
|||||||++||||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+++..
T Consensus 393 SgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~ 472 (491)
T PRK10982 393 SGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGI 472 (491)
T ss_pred CcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999997753 57899999999999976 899999999999988
Q ss_pred cChhHH
Q 000845 1226 DEPKKL 1231 (1255)
Q Consensus 1226 G~~~eL 1231 (1255)
++++++
T Consensus 473 ~~~~~~ 478 (491)
T PRK10982 473 VDTKTT 478 (491)
T ss_pred EccccC
Confidence 877543
No 69
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.1e-57 Score=566.43 Aligned_cols=521 Identities=13% Similarity=0.075 Sum_probs=404.3
Q ss_pred hHHHHHhcccc---hHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---CCCC-hhHHHH----HHHHHHHHHHHHHHHHH
Q 000845 676 PYIDYLSHKKG---FLYFTLSTFAYLIFLVAQILQSLWIATYIPS---TSIS-RLKLVI----VYSGIGIGMMFLLLTRS 744 (1255)
Q Consensus 676 ~~~~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~-~~~~~~----~~~~~~~~~~~~~~~~~ 744 (1255)
.+++|+..... +..+++.+++.++..++.+..+++.....+. .... ...+++ +++++.++..+..++..
T Consensus 81 ~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~ 160 (659)
T TIGR00954 81 FLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLK 160 (659)
T ss_pred HHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555544332 2233344555566667777777777654432 1111 111122 22333344444555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHH-HhH
Q 000845 745 FLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGA-LTW 823 (1255)
Q Consensus 745 ~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~ 823 (1255)
++......+....+|++.+++....++.|||+ ++|++++|+++|++.+...+...+..++..++.+++.++.++. .+|
T Consensus 161 ~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~ 239 (659)
T TIGR00954 161 ELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGS 239 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 66667777778888888888877888889987 8899999999999999999999999999999999988887776 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 824 QVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSF 903 (1255)
Q Consensus 824 ~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~ 903 (1255)
.++++++.++++..++.+++.+..+++.+...+..+.+.+.+.|.++|+++||+|+.++.+.+++.+..++..+......
T Consensus 240 ~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~ 319 (659)
T TIGR00954 240 VGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLII 319 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888888888999999999999999999999999999999999999999999999999998888888877777
Q ss_pred HHHHHHHHHHHHHHHHH-HHH-HHHH-H-HHhc----cCcccHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHhhhhhH
Q 000845 904 TAREWLIQRLETLSAIV-LAT-SALC-T-TLLH----KGHKGAGYT-GMALSF---GLSLNDFLVYSVNNQCIVGNLIVS 971 (1255)
Q Consensus 904 ~~~~wl~~~l~~~~~~~-~~~-~~~~-~-~~~~----~~~~~~~~~-g~~l~~---~~~~~~~l~~~~~~~~~~~~~~~s 971 (1255)
....++....+++.... ..+ .... . +... .|.++.|.. +..+.+ ...+...+..+......+.....+
T Consensus 320 ~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~ 399 (659)
T TIGR00954 320 KFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGF 399 (659)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666666554321 111 1111 1 2221 155666643 334444 456678888889999999999999
Q ss_pred HHHHHHHhcCCCCCcc------cccC-CC-----------C--CCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCC
Q 000845 972 VERLNQYMRIPSEAPE------LVQK-NS-----------P--APDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGG 1031 (1255)
Q Consensus 972 ~~Ri~~~~~~~~e~~~------~~~~-~~-----------~--~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~G 1031 (1255)
.+|+.++.+.+++... .... .. + .......+.|+++||+++|+.+ +++|+|+||+|++|
T Consensus 400 ~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~G 478 (659)
T TIGR00954 400 TARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSG 478 (659)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCC
Confidence 9999999865332110 0000 00 0 0000124679999999999643 46999999999999
Q ss_pred cEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccC--------C
Q 000845 1032 HKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPL--------S 1103 (1255)
Q Consensus 1032 e~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~--------~ 1103 (1255)
|++||+||||||||||+++|.|+++|++|+|.+|+ |++++||||+|.+|++|++||+... .
T Consensus 479 e~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~ 547 (659)
T TIGR00954 479 NHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRR 547 (659)
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhcc
Confidence 99999999999999999999999999999999874 6789999999999999999999743 2
Q ss_pred CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHH
Q 000845 1104 QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDS 1183 (1255)
Q Consensus 1104 ~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~ 1183 (1255)
..+++++++ +++.+++.+++.. |.|+||..+ .+.+||||||||++||||++++|+++|||||||+||+++++
T Consensus 548 ~~~~~~i~~------~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~ 619 (659)
T TIGR00954 548 GLSDKDLEQ------ILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEG 619 (659)
T ss_pred CCCHHHHHH------HHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHH
Confidence 356778877 9999999999877 999999986 46799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeC
Q 000845 1184 ILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSD 1219 (1255)
Q Consensus 1184 ~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~ 1219 (1255)
.+++.+++ .++|+|+||||++++..||+|++|+.
T Consensus 620 ~l~~~l~~--~~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 620 YMYRLCRE--FGITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHH--cCCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999987 38999999999999999999999973
No 70
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.1e-58 Score=567.08 Aligned_cols=202 Identities=16% Similarity=0.234 Sum_probs=164.3
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
.-|+++||+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ + .+|
T Consensus 323 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i 389 (556)
T PRK11819 323 KVIEAENLSKSFGD--RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKL 389 (556)
T ss_pred eEEEEEeEEEEECC--eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEE
Confidence 36999999999953 3599999999999999999999999999999999999999999999954 2 169
Q ss_pred EEEccCC-ccCC-CchhhhcccCCC---CC--hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1082 GIIPQDP-TLFS-GSVRYNLDPLSQ---FT--DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1082 ~~vpQdp-~Lf~-gTIr~Nl~~~~~---~s--d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
+|+||++ .++. -|+++|+..... .. +.+..+ +++..++.+. ..+. ....||||||||
T Consensus 390 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~------~l~~~~l~~~------~~~~----~~~~LSgG~~qr 453 (556)
T PRK11819 390 AYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRA------YVGRFNFKGG------DQQK----KVGVLSGGERNR 453 (556)
T ss_pred EEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHH------HHHhCCCChh------HhcC----chhhCCHHHHHH
Confidence 9999997 5665 499999964211 11 122222 4555554211 1122 235799999999
Q ss_pred HHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeC-CEEEE-EcChhHH
Q 000845 1155 IGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSD-GKLVE-YDEPKKL 1231 (1255)
Q Consensus 1155 l~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~-G~ive-~G~~~eL 1231 (1255)
++||||++.+|++|||||||++||+.+.+.+.+.|++. . .|+|+|||+++.+.. ||+|++|++ |++.+ .|+++++
T Consensus 454 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~ 531 (556)
T PRK11819 454 LHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEY 531 (556)
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHH
Confidence 99999999999999999999999999999999999875 3 489999999999876 999999996 88874 7788877
Q ss_pred hhc
Q 000845 1232 LRR 1234 (1255)
Q Consensus 1232 l~~ 1234 (1255)
++.
T Consensus 532 ~~~ 534 (556)
T PRK11819 532 EED 534 (556)
T ss_pred HHH
Confidence 654
No 71
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=6.2e-56 Score=554.69 Aligned_cols=496 Identities=18% Similarity=0.261 Sum_probs=397.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 119 RALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLK 198 (1255)
Q Consensus 119 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1255)
..+++.+++.++.+.++.++..++...+|++++.+++..-.... ...-+.++++++++.++..++.....+...+.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 84 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD-RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNK 84 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778888888899999999999999999998885543221 11222233334444455555555556677788888
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000845 199 IRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGLATIATLIVM 277 (1255)
Q Consensus 199 ~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~~ 277 (1255)
+...+...+|+|.++.+....++.+.|++.|.++.|++++.+... .+..++...+.+++++.++++.-++.+++.++++
T Consensus 85 ~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~ 164 (571)
T TIGR02203 85 VVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVML 164 (571)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 888899999999999988878888999999999999999987654 4555666666666666666654444666666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 278 ILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVLF 357 (1255)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 357 (1255)
++.+.+..++.+...+..++..+..+++.+...|.++++++||.++.|+.+.++.++..++..+...+..........+.
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (571)
T TIGR02203 165 PVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPIT 244 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788888999999999999999999999999999999999999999888887766655554444433333322222
Q ss_pred HHHHH--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhcc
Q 000845 358 WSSPI--LIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQV 435 (1255)
Q Consensus 358 ~~~~~--~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~ 435 (1255)
..... .+..+.++.+.+..+.+|++.+++++.++..+..|+..+...+..+.+++++++|+.++++.++..+....
T Consensus 245 ~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~-- 322 (571)
T TIGR02203 245 QLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR-- 322 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC--
Confidence 22221 23345566677778899999999999999999999999999999999999999999999987554321111
Q ss_pred cccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC-------------
Q 000845 436 CSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------------- 502 (1255)
Q Consensus 436 ~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------------- 502 (1255)
+. .+..+.|+++|++|+|+.+. +++|+|+||++++||.++|+|++|||||||+++|+|.++|.+|
T Consensus 323 ~~-~~~~~~i~~~~v~f~y~~~~-~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~ 400 (571)
T TIGR02203 323 AI-ERARGDVEFRNVTFRYPGRD-RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYT 400 (571)
T ss_pred CC-CCCCCeEEEEEEEEEcCCCC-CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcC
Confidence 11 11345799999999997653 5899999999999999999999999999999999999999988
Q ss_pred -------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHH
Q 000845 503 -------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQL 533 (1255)
Q Consensus 503 -------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaL 533 (1255)
+++..+|+|.+|.|||+|.+|||||||||+|
T Consensus 401 ~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaL 480 (571)
T TIGR02203 401 LASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAI 480 (571)
T ss_pred HHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHH
Confidence 1245689999999999999999999999999
Q ss_pred HHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcch
Q 000845 534 ARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQ 613 (1255)
Q Consensus 534 ARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~ 613 (1255)
|||+|++|+|++||||||+||+++++.|.+. +....+++|+|+|||+++.+..||+|++|++|++++.|+++++++.++
T Consensus 481 ARall~~~~illLDEpts~LD~~~~~~i~~~-L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~ 559 (571)
T TIGR02203 481 ARALLKDAPILILDEATSALDNESERLVQAA-LERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNG 559 (571)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcCC
Confidence 9999999999999999999999999988654 455667899999999999999999999999999999999999987777
Q ss_pred HHHHHHH
Q 000845 614 EFQDLVN 620 (1255)
Q Consensus 614 ~~~~l~~ 620 (1255)
.|.++..
T Consensus 560 ~~~~~~~ 566 (571)
T TIGR02203 560 LYAQLHN 566 (571)
T ss_pred HHHHHHH
Confidence 7777654
No 72
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-58 Score=571.98 Aligned_cols=198 Identities=23% Similarity=0.318 Sum_probs=162.0
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .+++
T Consensus 312 ~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ig 378 (638)
T PRK10636 312 LLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLG 378 (638)
T ss_pred eEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEE
Confidence 5999999999953 46999999999999999999999999999999999999999999999741 2699
Q ss_pred EEccCC--ccCC-CchhhhcccC-CCCChHHHHhccCchhHHHhccHHH-HHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1083 IIPQDP--TLFS-GSVRYNLDPL-SQFTDQEIWEVTIPSQVLEKCQLRE-VIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1083 ~vpQdp--~Lf~-gTIr~Nl~~~-~~~sd~ei~~~~~~~~al~~~~l~~-~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
|+||++ .+.. .|+.+++... ....++++.+ .|+..++.. .. +.. ...||||||||++|
T Consensus 379 y~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~L~~~~l~~~~~-------~~~----~~~LSgGekqRl~L 441 (638)
T PRK10636 379 YFAQHQLEFLRADESPLQHLARLAPQELEQKLRD------YLGGFGFQGDKV-------TEE----TRRFSGGEKARLVL 441 (638)
T ss_pred EecCcchhhCCccchHHHHHHHhCchhhHHHHHH------HHHHcCCChhHh-------cCc----hhhCCHHHHHHHHH
Confidence 999985 3433 3777776311 1112233333 555555531 22 222 34799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEE-EEcChhHHh
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLV-EYDEPKKLL 1232 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv-e~G~~~eLl 1232 (1255)
|||++++|++|||||||++||+.+.+.+.+.|++. . .|||+|||+++.+.. ||+|++|++|+++ ..|++++..
T Consensus 442 a~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 516 (638)
T PRK10636 442 ALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQ 516 (638)
T ss_pred HHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHH
Confidence 99999999999999999999999999999999875 4 599999999999976 9999999999998 678888874
No 73
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-55 Score=553.10 Aligned_cols=493 Identities=19% Similarity=0.246 Sum_probs=377.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 120 ALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKY-EIYSLAISLFLVKCVESLAGRHWFFQSRLTGLK 198 (1255)
Q Consensus 120 ~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1255)
.+++.+++.++...++.++..++..+.|+++..+++.+........ ....+++++++..++..++.....+...+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVG 95 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777888888889999999999999999997643221111 112223334444455556666667777888888
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHH
Q 000845 199 IRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWF-HQIWSTSLQLCIAVVVVYYSVGL-ATIATLIV 276 (1255)
Q Consensus 199 ~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~-~~~~~~pl~i~v~~~lL~~~lG~-~~l~g~~~ 276 (1255)
+...+...+|+|.++.+.....+.++|++.|.++.|++.+.+.+... ..+....+.+++.+.+++ .++| .+++.+++
T Consensus 96 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~li~l~~ 174 (592)
T PRK10790 96 VVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMF-SLDWRMALVAIMI 174 (592)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 88999999999999998887788899999999999999998865533 333333333333333333 3344 44444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 000845 277 MILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGY---- 352 (1255)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~---- 352 (1255)
+++.+.+.....+...+..++..+..++-.+...|.++++++||.|+.|+.+.++..+..++..+...+.......
T Consensus 175 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (592)
T PRK10790 175 FPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRP 254 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445556667777777888888888889999999999999999999999999887555433332222221111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcch
Q 000845 353 YMVLFWSSPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDM 432 (1255)
Q Consensus 353 ~~~~~~~~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 432 (1255)
...+......++.++.++ + ...+.++.+.+++++.++..+..|+..++..+..+.++..|++||.++++.++.+....
T Consensus 255 ~~~~~~~~~~~~~~~~~~-~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~ 332 (592)
T PRK10790 255 LLSLFSALILCGLLMLFG-F-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGND 332 (592)
T ss_pred HHHHHHHHHHHHHHHHHH-H-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCC
Confidence 111111111112112222 2 35678999999999999999999999999999999999999999999998764322111
Q ss_pred hcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC----------
Q 000845 433 QQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG---------- 502 (1255)
Q Consensus 433 ~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G---------- 502 (1255)
..+ ...+.|+++|++|+|+.+ +++|+|+||++++||.++|+|++|||||||+++|+|+++|.+|
T Consensus 333 -~~~---~~~~~i~~~~v~f~y~~~--~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~ 406 (592)
T PRK10790 333 -DRP---LQSGRIDIDNVSFAYRDD--NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLS 406 (592)
T ss_pred -ccC---CCCCeEEEEEEEEEeCCC--CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhh
Confidence 111 134579999999999743 4799999999999999999999999999999999999999988
Q ss_pred --------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHH
Q 000845 503 --------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQ 532 (1255)
Q Consensus 503 --------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIa 532 (1255)
+++..+|+|.+|.+||+|.+|||||||||+
T Consensus 407 ~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRia 486 (592)
T PRK10790 407 SLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLA 486 (592)
T ss_pred hCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHH
Confidence 246679999999999999999999999999
Q ss_pred HHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcc
Q 000845 533 LARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTS 612 (1255)
Q Consensus 533 LARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~ 612 (1255)
||||+|++|+|+|||||||+||+++++.|. +.+..+.+++|+|+||||++.++.||+|++|++|++++.|+|+|+++.+
T Consensus 487 lARaLl~~~~illlDEpts~LD~~t~~~i~-~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~ 565 (592)
T PRK10790 487 LARVLVQTPQILILDEATANIDSGTEQAIQ-QALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQ 565 (592)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHH-HHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 999999999999999999999999998885 4555666789999999999999999999999999999999999999888
Q ss_pred hHHHHHHHHh
Q 000845 613 QEFQDLVNAH 622 (1255)
Q Consensus 613 ~~~~~l~~~~ 622 (1255)
+.|.++...+
T Consensus 566 ~~y~~l~~~~ 575 (592)
T PRK10790 566 GRYWQMYQLQ 575 (592)
T ss_pred CHHHHHHHHH
Confidence 8898887654
No 74
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=8e-58 Score=569.24 Aligned_cols=199 Identities=17% Similarity=0.273 Sum_probs=162.0
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
.-++++||+++|++ .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.+|
T Consensus 507 ~~L~~~~ls~~y~~-~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPG-GPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCC-CCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 46999999999953 34599999999999999999999999999999999999999999999875 3579
Q ss_pred EEEccCCccCCCchhhhcc-c----CCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1082 GIIPQDPTLFSGSVRYNLD-P----LSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1082 ~~vpQdp~Lf~gTIr~Nl~-~----~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
+|+||++. ...++.+|.. . +...+++++.+ +++..++.+.. .......||||||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~------~L~~~gl~~~~----------~~~~~~~LSgGqkqRva 637 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRA------HLGSFGVTGNL----------ALQPMYTLSGGQKSRVA 637 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHH------HHHHCCCChHH----------hcCCccccCHHHHHHHH
Confidence 99999973 2234555531 1 11234455544 67777764221 11233579999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEE-EEcChhHH
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLV-EYDEPKKL 1231 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv-e~G~~~eL 1231 (1255)
||||++++|++|||||||++||+.+.+.+.+.+++. . .|||+|||+++.+.. ||+|++|++|+++ ..|++++.
T Consensus 638 LAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 638 FAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred HHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 999999999999999999999999999999999764 3 599999999999986 9999999999998 56777664
No 75
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.5e-56 Score=550.25 Aligned_cols=482 Identities=21% Similarity=0.254 Sum_probs=376.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000845 136 ALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSLCAAISSKQLRLS 215 (1255)
Q Consensus 136 ~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~iy~K~l~l~ 215 (1255)
.++..++..+.|++++.+++.+..........+.+++.++++.++..++.....+...+.+.++...+...+|+|.++++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34556677788999999999775432122223334444555555555655555667777888999999999999999999
Q ss_pred hhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 216 NAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGL-ATIATLIVMILTVLGNSPLAKLQHK 293 (1255)
Q Consensus 216 ~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~-~~l~g~~~~~~~~~~~~~~~~~~~~ 293 (1255)
.....+.++|+++|.+++|++.+..... .+..++..++..++++++++..++| .+++.++++++...+...+.+...+
T Consensus 84 ~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 84 PEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877788999999999999999986543 4555666655555555555445666 5556666666666666777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 000845 294 YQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVLFWSSP--ILIGAATLLT 371 (1255)
Q Consensus 294 ~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~f~~ 371 (1255)
..++..+..++..+.+.|.++++++||.|++|+.+.++..+.-++..+...+.....+....+..... ..+..+.++.
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888889999999999999999999998887766433322222222222222111111111 1233445677
Q ss_pred HHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhcccccccCcceEEEEeeE
Q 000845 372 CYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRAELEHSIFIKSAD 451 (1255)
Q Consensus 372 ~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~i~~~~~~ 451 (1255)
|.+.++.+|++.+++++.++..+..|+..++..+..+..++++.+||.++++.++..+......+ +..+.|+++|++
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~~~---~~~~~I~~~~v~ 320 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEPVP---EGRGELDVNIRQ 320 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCC---CCCCcEEEEEEE
Confidence 77778899999999999999999999999999999999999999999999987543211100011 123569999999
Q ss_pred EEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC-----------------------------
Q 000845 452 LSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG----------------------------- 502 (1255)
Q Consensus 452 f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G----------------------------- 502 (1255)
|+|+.+ ++++|+|+||++++|++++|+||+|||||||+++|+|+++|.+|
T Consensus 321 ~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~ 399 (569)
T PRK10789 321 FTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF 399 (569)
T ss_pred EECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCe
Confidence 999854 35799999999999999999999999999999999999999988
Q ss_pred --------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcC
Q 000845 503 --------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPF 550 (1255)
Q Consensus 503 --------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~ 550 (1255)
.++..+|+|.+|.+|++|.+|||||||||+||||++++|+|+||||||
T Consensus 400 lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpt 479 (569)
T PRK10789 400 LFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDAL 479 (569)
T ss_pred eccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcc
Confidence 235678999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHHHHHHHHh
Q 000845 551 SALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEFQDLVNAH 622 (1255)
Q Consensus 551 SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~~~l~~~~ 622 (1255)
|+||+++++.+.+. +..+.+++|+|++||+++.++.||+|++|++|++++.|+++++++..+.|.+++..+
T Consensus 480 s~LD~~~~~~i~~~-l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 480 SAVDGRTEHQILHN-LRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred ccCCHHHHHHHHHH-HHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 99999999888755 555668999999999999999999999999999999999999998888888887654
No 76
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.1e-57 Score=563.34 Aligned_cols=200 Identities=18% Similarity=0.237 Sum_probs=162.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+++ + .+|+
T Consensus 322 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~----------~~i~ 388 (552)
T TIGR03719 322 VIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-T----------VKLA 388 (552)
T ss_pred EEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-c----------eEEE
Confidence 5999999999953 3599999999999999999999999999999999999999999999954 2 1699
Q ss_pred EEccCCc-cCC-CchhhhcccCCC---CC--hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1083 IIPQDPT-LFS-GSVRYNLDPLSQ---FT--DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1083 ~vpQdp~-Lf~-gTIr~Nl~~~~~---~s--d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
|+||++. ++. -|+++|+..... .. +.+..+ +++..++.+. ........||||||||+
T Consensus 389 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~------~l~~~~l~~~----------~~~~~~~~LSgGe~qrv 452 (552)
T TIGR03719 389 YVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRA------YVGRFNFKGS----------DQQKKVGQLSGGERNRV 452 (552)
T ss_pred EEeCCccccCCCCcHHHHHHhhccccccCcchHHHHH------HHHhCCCChh----------HhcCchhhCCHHHHHHH
Confidence 9999973 665 499999974221 11 111222 4555554211 11223357999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeC-CEEEE-EcChhHHh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSD-GKLVE-YDEPKKLL 1232 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~-G~ive-~G~~~eLl 1232 (1255)
+||||++.+|++|||||||++||+.+.+.+.+.|++. . .|||+|||+++.+.. ||+|++|++ |++++ .|++++..
T Consensus 453 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~ 530 (552)
T TIGR03719 453 HLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYE 530 (552)
T ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHH
Confidence 9999999999999999999999999999999999986 3 489999999999976 999999997 68874 47777665
Q ss_pred h
Q 000845 1233 R 1233 (1255)
Q Consensus 1233 ~ 1233 (1255)
+
T Consensus 531 ~ 531 (552)
T TIGR03719 531 E 531 (552)
T ss_pred H
Confidence 4
No 77
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-55 Score=547.03 Aligned_cols=494 Identities=20% Similarity=0.257 Sum_probs=372.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCcc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 121 LISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAE-GEII--FKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGL 197 (1255)
Q Consensus 121 l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1255)
+++.+++.++++.++.++..++..+.|.+++.+++..- .... ........+++++++.++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888888999999999999999999998642 2110 00111112233444445566666666777888899
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000845 198 KIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFW-FHQIWSTSLQLCIAVVVVYYSVGLATIATLIV 276 (1255)
Q Consensus 198 ~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~ 276 (1255)
++...+...+|+|.++++....++.++|++++.+++|++++.++... +..+....+.++++++++++.-.+.+++.+++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888889999999999999999987643 44444445555555444443222233333333
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 277 MILTVL-GNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMV 355 (1255)
Q Consensus 277 ~~~~~~-~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 355 (1255)
+++..+ +..++.+..++..++..+..++..+.+.|.++++++||.|+.|+.+.+++.+..++-.+...+.....+....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (574)
T PRK11160 170 LLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQA 249 (574)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332222 3355667778888888899999999999999999999999999998888877555443333333333222222
Q ss_pred HHHHHH--HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcch
Q 000845 356 LFWSSP--ILIGAATLLTCYFLGIPLNPSNVFTFLATLRIL-QEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDM 432 (1255)
Q Consensus 356 ~~~~~~--~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l-~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 432 (1255)
+..... ..+.++.++.+. ..+.++++..++++.+...+ ..|+..++..+..+.++..|++||.++++.|+..+...
T Consensus 250 ~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~~ 328 (574)
T PRK11160 250 LMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFPT 328 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 211111 122234455554 46778888877766554333 45788888899999999999999999998754321110
Q ss_pred hcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC----------
Q 000845 433 QQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG---------- 502 (1255)
Q Consensus 433 ~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G---------- 502 (1255)
...+ .+..+.|+++|++|+|+.++ +++|+|+||++++||.++|+||+|||||||+++|+|+++|.+|
T Consensus 329 ~~~~--~~~~~~i~~~~v~f~y~~~~-~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~ 405 (574)
T PRK11160 329 TSTA--AADQVSLTLNNVSFTYPDQP-QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIA 405 (574)
T ss_pred ccCC--CCCCCeEEEEEEEEECCCCC-CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhh
Confidence 0011 11345799999999997542 4799999999999999999999999999999999999999998
Q ss_pred ---------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHH
Q 000845 503 ---------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRI 531 (1255)
Q Consensus 503 ---------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRI 531 (1255)
+++.. |+|++|.+||+|.+|||||||||
T Consensus 406 ~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRi 484 (574)
T PRK11160 406 DYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRL 484 (574)
T ss_pred hCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHH
Confidence 24677 99999999999999999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 532 QLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 532 aLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
+||||++++|+|+|||||||+||+++++.|.+ .+....+++|+|+|||+++.++.||+|++|++|++++.|+|+|++++
T Consensus 485 alARall~~~~ililDE~ts~lD~~t~~~i~~-~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 563 (574)
T PRK11160 485 GIARALLHDAPLLLLDEPTEGLDAETERQILE-LLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQ 563 (574)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhc
Confidence 99999999999999999999999999987754 55666679999999999999999999999999999999999999998
Q ss_pred chHHHHHHH
Q 000845 612 SQEFQDLVN 620 (1255)
Q Consensus 612 ~~~~~~l~~ 620 (1255)
++.|.++++
T Consensus 564 ~g~y~~l~~ 572 (574)
T PRK11160 564 QGRYYQLKQ 572 (574)
T ss_pred CcHHHHHHh
Confidence 888888764
No 78
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.2e-57 Score=570.01 Aligned_cols=199 Identities=22% Similarity=0.320 Sum_probs=161.6
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +|+
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 5999999999953 45999999999999999999999999999999999999999999998 4332 599
Q ss_pred EEccCC-ccCCC-chhhhcccCC-CC--C--hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1083 IIPQDP-TLFSG-SVRYNLDPLS-QF--T--DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1083 ~vpQdp-~Lf~g-TIr~Nl~~~~-~~--s--d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
|++|++ .++.. |+++|+.... .. . +.++.+ .++..++... ..+..+ ..||||||||+
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~------~l~~~~l~~~------~~~~~~----~~LSgGekqRl 449 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLG------YLQDFLFHPK------RAMTPV----KALSGGERNRL 449 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHH------HHHhcCCCHH------HHhChh----hhCCHHHHHHH
Confidence 999986 46654 9999996421 11 1 222222 4444444211 122333 46999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEe-CCEEEEE-cChhHHh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMS-DGKLVEY-DEPKKLL 1232 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~-~G~ive~-G~~~eLl 1232 (1255)
+||||++.+|++|||||||++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||+|++|+ +|+|.++ |++++-+
T Consensus 450 ~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~ 527 (635)
T PRK11147 450 LLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDAR 527 (635)
T ss_pred HHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHH
Confidence 9999999999999999999999999999999999875 5699999999999976 99999998 8999875 5666654
No 79
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-55 Score=505.98 Aligned_cols=482 Identities=23% Similarity=0.279 Sum_probs=387.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 132 SGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSLCAAISSKQ 211 (1255)
Q Consensus 132 ~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~iy~K~ 211 (1255)
..++..+..+....+-.++..+++.+-..+. ...-+.++++++++.++++++...-....++.+.++|..+...+++|.
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~-~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l 83 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQL-FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKL 83 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666666777777777777765543322 233445667777788888888777788899999999999999999999
Q ss_pred hcCChhhhccCChhHHHHHHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000845 212 LRLSNAAKMMHTSGDIVNYVTVDAYRIGEFP----FWFHQIWSTSLQLCIAVVVVYYSVGLATIATLIVMILTVLGNSPL 287 (1255)
Q Consensus 212 l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~----~~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~~~~~~~~~~~~ 287 (1255)
.++.....+..++|+..+++..-++.+..++ .........|+-+.++++...|. ++++-++.++++-.+.+.+
T Consensus 84 ~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~---aalIllit~PlIPlfMilv 160 (559)
T COG4988 84 AKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWA---AALILLITAPLIPLFMILV 160 (559)
T ss_pred HhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHH
Confidence 9999877778899999999999999987754 33444555677777776665544 5556666677666677778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 288 AKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIE----KLRSEEYGWLKVLQLQKGYYMVLFWSSPIL 363 (1255)
Q Consensus 288 ~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~----~~R~~El~~~~~~~~~~~~~~~~~~~~~~~ 363 (1255)
++..++..++.++....=-...-+-|+|+.++|.|+-.+...++|. +.|++-|+.+|......++..++.+.. +
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~ls--i 238 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLS--I 238 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 8888888888888888877888899999999999999887777764 589999998887655555444443322 2
Q ss_pred HHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhcccccccCc
Q 000845 364 IGAATLLTCYFLG-IPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRAELE 442 (1255)
Q Consensus 364 ~~~~~f~~~~~~~-~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~ 442 (1255)
+.++.|..+-+.+ ++++....|+++-+---.-.|++.+...++.-+++..+.+++..|++.|+...+............
T Consensus 239 AlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~ 318 (559)
T COG4988 239 ALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPP 318 (559)
T ss_pred HHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCC
Confidence 2223333334455 689999999999888888899999999999999999999999999999876443321111111133
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC--------------------
Q 000845 443 HSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG-------------------- 502 (1255)
Q Consensus 443 ~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G-------------------- 502 (1255)
..+..+|.+|.|+..+ ++++|+||++++|++++|||++|||||||+++|+|++++++|
T Consensus 319 ~ei~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 319 IEISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred ceeeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhH
Confidence 4566669999998653 899999999999999999999999999999999999999998
Q ss_pred -----------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCC
Q 000845 503 -----------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDR 541 (1255)
Q Consensus 503 -----------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~ 541 (1255)
+.+.. |+|-+|+|||+|.+|||||+|||+||||+++++
T Consensus 397 i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~ 475 (559)
T COG4988 397 ISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPA 475 (559)
T ss_pred eeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 12334 899999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHHHHHHHH
Q 000845 542 DIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEFQDLVNA 621 (1255)
Q Consensus 542 ~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~~~l~~~ 621 (1255)
++||||||||+||+++++.| .+.+..+.++||+|+||||++.+..+|+|++||+|+++++|+|+++.++++.|.+++..
T Consensus 476 ~l~llDEpTA~LD~etE~~i-~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~ 554 (559)
T COG4988 476 SLLLLDEPTAHLDAETEQII-LQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQ 554 (559)
T ss_pred CEEEecCCccCCCHhHHHHH-HHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHH
Confidence 99999999999999998655 56777788899999999999999999999999999999999999999999999999876
Q ss_pred hh
Q 000845 622 HK 623 (1255)
Q Consensus 622 ~~ 623 (1255)
+.
T Consensus 555 q~ 556 (559)
T COG4988 555 QE 556 (559)
T ss_pred Hh
Confidence 54
No 80
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.9e-55 Score=550.51 Aligned_cols=501 Identities=20% Similarity=0.247 Sum_probs=383.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 117 ILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAE-GEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLT 195 (1255)
Q Consensus 117 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1255)
.++.+++.+++.+....++.++..++.++.|++++.+++.+- ..+. .....+++.++++.++..++.....+...++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSS--GLLNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455667777888888889999999999999999999733 3221 1111222223333333444444556677788
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000845 196 GLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGLATIATL 274 (1255)
Q Consensus 196 ~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~ 274 (1255)
+.++...+...+|+|.++++.....+.+.|++.|.++.|++.+.+... .+..++...+.+++++++++..-.+.+++.+
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 165 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVL 165 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 899999999999999999988777778899999999999999987653 3444444444454444444433333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 275 IVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYM 354 (1255)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 354 (1255)
+.+++...+..++.+.+.+..++.++..++..+...|.++++++||.+++|+.+.++..+..++..+...+.........
T Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (576)
T TIGR02204 166 LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLT 245 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444556678888888999999999999999999999999999999999888877755554443333322222222
Q ss_pred HHHHH--HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcch
Q 000845 355 VLFWS--SPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDM 432 (1255)
Q Consensus 355 ~~~~~--~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 432 (1255)
.+... ...++..+.++.+.+..+.+|++.++++..++..+..|+..++..+..+.+++++++||.++++.++..+...
T Consensus 246 ~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 325 (576)
T TIGR02204 246 AIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPA 325 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC
Confidence 11111 1122344456777777889999999999999999999999999999999999999999999998754311110
Q ss_pred hcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC----------
Q 000845 433 QQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG---------- 502 (1255)
Q Consensus 433 ~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G---------- 502 (1255)
.......+....|+++|++|+|+.+.++++|+|+||+++|||.++|+|++|||||||+++|+|+++|.+|
T Consensus 326 ~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~ 405 (576)
T TIGR02204 326 HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLR 405 (576)
T ss_pred CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHH
Confidence 0000011123579999999999864446899999999999999999999999999999999999999988
Q ss_pred ---------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHH
Q 000845 503 ---------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRI 531 (1255)
Q Consensus 503 ---------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRI 531 (1255)
+++..+|+|++|.+||+|.+||||||||+
T Consensus 406 ~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl 485 (576)
T TIGR02204 406 QLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRI 485 (576)
T ss_pred hcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHH
Confidence 13567899999999999999999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 532 QLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 532 aLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
+||||+|++|+++|||||||+||+++++.++ +.+..+.+++|+|+|||+++.++.+|+|++|++|++++.|+++++.++
T Consensus 486 ~laRal~~~~~ililDEpts~lD~~~~~~i~-~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~ 564 (576)
T TIGR02204 486 AIARAILKDAPILLLDEATSALDAESEQLVQ-QALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK 564 (576)
T ss_pred HHHHHHHhCCCeEEEeCcccccCHHHHHHHH-HHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc
Confidence 9999999999999999999999999987765 455566689999999999999999999999999999999999999888
Q ss_pred chHHHHHHH
Q 000845 612 SQEFQDLVN 620 (1255)
Q Consensus 612 ~~~~~~l~~ 620 (1255)
.+.|.++..
T Consensus 565 ~~~~~~l~~ 573 (576)
T TIGR02204 565 GGLYARLAR 573 (576)
T ss_pred CChHHHHHh
Confidence 777777654
No 81
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.2e-55 Score=555.19 Aligned_cols=501 Identities=21% Similarity=0.233 Sum_probs=396.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 115 PSILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRL 194 (1255)
Q Consensus 115 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1255)
.+.++..++.+++.+....+..++..++.++.|++++.+++.+-... .....+.++++++++.++..++.....+...+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~-~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~ 205 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHR-GLSTLSVLALAMLAVAIFEPALGGLRTYLFAH 205 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556667777888888889999999999999999998764322 12223334445555555666666666777888
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000845 195 TGLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGLATIAT 273 (1255)
Q Consensus 195 ~~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g 273 (1255)
++.++...+...+|+|.++++....++.++|++++.+ .|++.+.+.+. .+..+....+.+++.+++++..-++.+++.
T Consensus 206 ~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 284 (694)
T TIGR01846 206 LTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVV 284 (694)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998888888999999999 69999988653 333333333334444445554444466666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 274 LIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYY 353 (1255)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~ 353 (1255)
++++++...+..++.+...+..++.++..+++.+.+.|.++++++||.++.|+.+.++..+.-++..+...+........
T Consensus 285 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (694)
T TIGR01846 285 IGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIA 364 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666777778888888888888999999999999999999999999999988888775555444444443333333
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q 000845 354 MVLFWSSPI--LIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSD 431 (1255)
Q Consensus 354 ~~~~~~~~~--~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~ 431 (1255)
......... .+..+.+|.+.+..+.+|++.+++...+...+..|+..+...+..+.+++++++|+.++++.|+..+..
T Consensus 365 ~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 444 (694)
T TIGR01846 365 GQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA 444 (694)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC
Confidence 222222111 233456777777788999999999999999999999999999999999999999999999876432211
Q ss_pred hhcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC---------
Q 000845 432 MQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG--------- 502 (1255)
Q Consensus 432 ~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G--------- 502 (1255)
...+. ....+.|+++|++|+|+.+. +++|+|+||++++||.++|+|++|||||||+++|+|+++|.+|
T Consensus 445 -~~~~~-~~~~~~i~~~~vsf~y~~~~-~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i 521 (694)
T TIGR01846 445 -GLAAL-PELRGAITFENIRFRYAPDS-PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDL 521 (694)
T ss_pred -CCCCC-CCCCCeEEEEEEEEEcCCCC-ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeh
Confidence 10011 11346799999999997543 4799999999999999999999999999999999999999998
Q ss_pred ----------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHH
Q 000845 503 ----------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQR 530 (1255)
Q Consensus 503 ----------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqR 530 (1255)
+.+..+|+|.+|.+|++|.+||||||||
T Consensus 522 ~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qr 601 (694)
T TIGR01846 522 AIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQR 601 (694)
T ss_pred hhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHH
Confidence 2356799999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhh
Q 000845 531 IQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 531 IaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
++||||++++|+|+|||||||+||+++++.+.+. +..+.+++|+|++||+++.++.||+|++|++|++++.|+|+++++
T Consensus 602 i~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~ 680 (694)
T TIGR01846 602 IAIARALVGNPRILIFDEATSALDYESEALIMRN-MREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLA 680 (694)
T ss_pred HHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 9999999999999999999999999999888654 555667999999999999999999999999999999999999998
Q ss_pred cchHHHHHHHH
Q 000845 611 TSQEFQDLVNA 621 (1255)
Q Consensus 611 ~~~~~~~l~~~ 621 (1255)
..+.|.+++..
T Consensus 681 ~~~~y~~l~~~ 691 (694)
T TIGR01846 681 LQGLYARLWQQ 691 (694)
T ss_pred cCChHHHHHHh
Confidence 88888888753
No 82
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.1e-54 Score=540.85 Aligned_cols=487 Identities=24% Similarity=0.296 Sum_probs=380.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 125 HWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSLC 204 (1255)
Q Consensus 125 ~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~ 204 (1255)
++ .++.+.++.++..++....|.++..+++.+... ......+...++++.++..++.....+...+.+.++...+.
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr 88 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD---LGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLR 88 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 788888888899999999999999999887611 11222223333333334445555556666667788889999
Q ss_pred HHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHH
Q 000845 205 AAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWFHQIWS-TSLQLCIAVVVVYYSVGL-ATIATLIVMILTVL 282 (1255)
Q Consensus 205 ~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~~~~~~-~pl~i~v~~~lL~~~lG~-~~l~g~~~~~~~~~ 282 (1255)
..+|+|.++++....++...|++++.+++|++.+...+........ .++.++..++++ ..++| .+++.++..+++..
T Consensus 89 ~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~l~~~~~~~~~~~ 167 (567)
T COG1132 89 RDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLL-FSLSWRLALILLLILPLLAL 167 (567)
T ss_pred HHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHH
Confidence 9999999999988888888999999999999999988766433222 333333333333 34555 44455555555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHH
Q 000845 283 GNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYM-VLF-WSS 360 (1255)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~-~~~-~~~ 360 (1255)
...++.++..+..++..+..++..+.+.|.++++++||.|+.|+...++..+..+...+...+......... ... ...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (567)
T COG1132 168 VLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSS 247 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666677667888889999999999999999999999999999998877666544443333222222222221 111 111
Q ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhccccccc
Q 000845 361 PILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRAE 440 (1255)
Q Consensus 361 ~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~ 440 (1255)
-.++.++.++.+.+..+.++++.+.+.+.++..+..|+..+...+..+..+..|++|+.++++.++...+.... ...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~---~~~ 324 (567)
T COG1132 248 LGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP---LKD 324 (567)
T ss_pred HHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---CCC
Confidence 12233445566666677899999999999999999999999999999999999999999999985532211110 111
Q ss_pred CcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------------------
Q 000845 441 LEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------------------ 502 (1255)
Q Consensus 441 ~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------------------ 502 (1255)
..+.|+|+|++|+|+. ++++|+|+||++++||.++||||+||||||++++|+|+++|.+|
T Consensus 325 ~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr 402 (567)
T COG1132 325 TIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLR 402 (567)
T ss_pred CCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHH
Confidence 4467999999999985 34899999999999999999999999999999999999999988
Q ss_pred -------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHcc
Q 000845 503 -------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQ 539 (1255)
Q Consensus 503 -------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~ 539 (1255)
+.+..+|+|++|.|||+|.+|||||||||+||||+++
T Consensus 403 ~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~ 482 (567)
T COG1132 403 KRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLR 482 (567)
T ss_pred HhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhc
Confidence 2467889999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHHHHHH
Q 000845 540 DRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEFQDLV 619 (1255)
Q Consensus 540 ~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~~~l~ 619 (1255)
+|+|++||||||+||+++++.|.+ .+..+.++||+|+|+||++.+.+||+|+||++|+|++.|+|+||++.++.|.+++
T Consensus 483 ~~~ILILDEaTSalD~~tE~~I~~-~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y~~l~ 561 (567)
T COG1132 483 NPPILILDEATSALDTETEALIQD-ALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGLYARLY 561 (567)
T ss_pred CCCEEEEeccccccCHHhHHHHHH-HHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCHHHHHH
Confidence 999999999999999999988865 4555668899999999999999999999999999999999999999999999988
Q ss_pred HHh
Q 000845 620 NAH 622 (1255)
Q Consensus 620 ~~~ 622 (1255)
..+
T Consensus 562 ~~~ 564 (567)
T COG1132 562 QAQ 564 (567)
T ss_pred HHh
Confidence 654
No 83
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.3e-54 Score=542.34 Aligned_cols=491 Identities=17% Similarity=0.231 Sum_probs=375.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 121 LISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIR 200 (1255)
Q Consensus 121 l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 200 (1255)
+++.+++.++..+++.++..++.++.|++++.+++.+.... .. ..+++.+++..++..+......+...+...++|
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG-DI---FPLLAAWAGFGLFNIIAGVLVARHADRLAHRRR 88 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777888888999999999999999999776431 11 111111111222222223333445667778888
Q ss_pred HHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHH
Q 000845 201 SSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGL-ATIATLIVMI 278 (1255)
Q Consensus 201 ~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~-~~l~g~~~~~ 278 (1255)
..+...+|+|.++++.....+.++|++.+.++.|++.+..... .+..+....+..++.+.+++. ++| .+++.+++++
T Consensus 89 ~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~l~~~~ 167 (588)
T PRK13657 89 LAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALF-MNWRLSLVLVVLGI 167 (588)
T ss_pred HHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 8899999999999988888888999999999999999876533 333333333333333333332 333 4455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q 000845 279 LTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKL----RSEEYGWLKVLQLQKGYYM 354 (1255)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~----R~~El~~~~~~~~~~~~~~ 354 (1255)
+...+..++.+...+.+++.++..++..+...|.++++++||.|+.|+.+.+++.+. ++.+.+..+.......+..
T Consensus 168 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (588)
T PRK13657 168 VYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNR 247 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556667778888888999999999999999999999999999999999877776553 3333333333322222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhc
Q 000845 355 VLFWSSPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQ 434 (1255)
Q Consensus 355 ~~~~~~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~ 434 (1255)
+.. ....+.+++++.|.+..+.+|++.+++++.++..+..|+..+...+..+..+..+++|+.++++.++..+.....
T Consensus 248 ~~~--~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~ 325 (588)
T PRK13657 248 AAS--TITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGA 325 (588)
T ss_pred HHH--HHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCC
Confidence 211 122344566777777888999999999999999999999999999999999999999999999875432111010
Q ss_pred ccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------------
Q 000845 435 VCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------------ 502 (1255)
Q Consensus 435 ~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------------ 502 (1255)
.+. .+..+.|+++|++|+|+.+ +++|+|+||++++|+.++|+|++|||||||+++|+|+++|.+|
T Consensus 326 ~~~-~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~ 402 (588)
T PRK13657 326 IDL-GRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTV 402 (588)
T ss_pred CCc-CCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhC
Confidence 000 1123579999999999743 4799999999999999999999999999999999999999998
Q ss_pred -------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHH
Q 000845 503 -------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQL 533 (1255)
Q Consensus 503 -------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaL 533 (1255)
..+..+|+|.+|.+|++|.+|||||||||+|
T Consensus 403 ~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRial 482 (588)
T PRK13657 403 TRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAI 482 (588)
T ss_pred CHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHH
Confidence 1255689999999999999999999999999
Q ss_pred HHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcch
Q 000845 534 ARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQ 613 (1255)
Q Consensus 534 ARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~ 613 (1255)
|||++++|+|++||||||+||+++++.|.+.+ ....+++|+|+||||++.++.||+|++|++|++++.|+++++++..+
T Consensus 483 ARall~~~~iliLDEpts~LD~~t~~~i~~~l-~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~ 561 (588)
T PRK13657 483 ARALLKDPPILILDEATSALDVETEAKVKAAL-DELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGG 561 (588)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCC
Confidence 99999999999999999999999998886554 45557899999999999999999999999999999999999998888
Q ss_pred HHHHHHHHh
Q 000845 614 EFQDLVNAH 622 (1255)
Q Consensus 614 ~~~~l~~~~ 622 (1255)
.|.++....
T Consensus 562 ~y~~l~~~~ 570 (588)
T PRK13657 562 RFAALLRAQ 570 (588)
T ss_pred hHHHHHHHh
Confidence 888887643
No 84
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=9e-55 Score=538.25 Aligned_cols=474 Identities=21% Similarity=0.198 Sum_probs=367.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 124 CHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSL 203 (1255)
Q Consensus 124 ~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l 203 (1255)
.+++.++...++.++..++..+.|++++++++.+-... .....+.+++.++++.++.+++.....+...+.+.++...+
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSG-SVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGAL 81 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777888888999999999999999998664221 12223344555566666677777777788888999999999
Q ss_pred HHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000845 204 CAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFW--FHQIWSTSLQLCIAVVVVYYSVGLATIATLIVMILTV 281 (1255)
Q Consensus 204 ~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~--~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~~~~~~ 281 (1255)
...+|+|.++++.. ..+...+.+++|++++.+.+.. +..+...++.++.. ++++..-++.+++.++.+++..
T Consensus 82 r~~~~~~ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~l~li~l~~~~l~~ 155 (544)
T TIGR01842 82 NQPIFAASFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYL-LVCFLLHPWIGILALGGAVVLV 155 (544)
T ss_pred HHHHHHHHhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999998752 2345678889999999876543 33334444433332 2333332333444444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 282 LGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVLFWSSP 361 (1255)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~ 361 (1255)
.+..+..+...+..++.++..+++.+.+.|.++++++||.|++|+.+.+++.+..++..+...+.....+....+.....
T Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (544)
T TIGR01842 156 GLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFR 235 (544)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566677778888899999999999999999999999999999999999877666555444433333333222221111
Q ss_pred --HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhcccccc
Q 000845 362 --ILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRA 439 (1255)
Q Consensus 362 --~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~ 439 (1255)
..+.+++++.+.+..+.+|++.+++++.++..+..|+..++..+..+.+++.|++||.++++.++..+... ..+
T Consensus 236 ~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~~--- 311 (544)
T TIGR01842 236 IVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM-PLP--- 311 (544)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CCC---
Confidence 12344567777777889999999999999999999999999999999999999999999998754322111 111
Q ss_pred cCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC-----------------
Q 000845 440 ELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG----------------- 502 (1255)
Q Consensus 440 ~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G----------------- 502 (1255)
+.++.++++|++|+|+.. ++++|+|+||++++|+.++|+||+|||||||+++|+|+++|.+|
T Consensus 312 ~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~ 390 (544)
T TIGR01842 312 EPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETF 390 (544)
T ss_pred CCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHH
Confidence 134579999999999753 24799999999999999999999999999999999999999988
Q ss_pred --------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHc
Q 000845 503 --------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALY 538 (1255)
Q Consensus 503 --------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly 538 (1255)
+.++.+|+|++|.+||+|.+||||||||++||||++
T Consensus 391 ~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall 470 (544)
T TIGR01842 391 GKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALY 470 (544)
T ss_pred hhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHh
Confidence 124568999999999999999999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhh
Q 000845 539 QDRDIYLLDDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 539 ~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
++|+++|||||||+||+++++.+.+ ++..+. +++|+|++||+++.+..||+|++|++|++++.|+++++++
T Consensus 471 ~~~~ililDEpts~LD~~~~~~i~~-~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 471 GDPKLVVLDEPNSNLDEEGEQALAN-AIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred cCCCEEEEeCCccccCHHHHHHHHH-HHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999888764 455543 6899999999999999999999999999999999998863
No 85
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=8.2e-54 Score=531.97 Aligned_cols=491 Identities=16% Similarity=0.216 Sum_probs=377.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 121 LISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIR 200 (1255)
Q Consensus 121 l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 200 (1255)
+++.+++.++...++.++..++..+.|++++.+++.+...+. . ..+++..++..++..+......+...++..++|
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD-V---LPTLALWAGFGVFNTIAYVLVAREADRLAHGRR 88 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446678888888888999999999999999999997754321 1 111111112223333333334556677888899
Q ss_pred HHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHH
Q 000845 201 SSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGL-ATIATLIVMI 278 (1255)
Q Consensus 201 ~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~-~~l~g~~~~~ 278 (1255)
..+...+|+|.++++....++.++|++++.++.|++.+...+. .+..+...++.+++.+++++. +.| .+++.+++++
T Consensus 89 ~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~li~l~~~~ 167 (585)
T TIGR01192 89 ATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFA-MDWRLSIVLMVLGI 167 (585)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 9999999999999998888888999999999999999986543 333344444444444444433 333 4445555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Q 000845 279 LTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSE----EYGWLKVLQLQKGYYM 354 (1255)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~----El~~~~~~~~~~~~~~ 354 (1255)
+...+..++.+...+.+++..+..++..+.+.|.++++++||.++.|+.+.+++.+.-++ ..+..+.......+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (585)
T TIGR01192 168 LYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNR 247 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666777788888888888888999999999999999999999999888877664443 2222222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhc
Q 000845 355 VLFWSSPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQ 434 (1255)
Q Consensus 355 ~~~~~~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~ 434 (1255)
.+... ..+.++.++.+.+..+.++++.+++.+.++..+..|+..++..+..+.+++.+++|+.++++.++..+.....
T Consensus 248 ~~~~~--~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~ 325 (585)
T TIGR01192 248 MASTI--SMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADA 325 (585)
T ss_pred HHHHH--HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccC
Confidence 11111 1233455677777788999999999999999999999999999999999999999999999875422111110
Q ss_pred ccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------------
Q 000845 435 VCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------------ 502 (1255)
Q Consensus 435 ~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------------ 502 (1255)
.+. .+..+.++++|++|+|+.+ +++|+|+||++++|+.++|+||+|||||||+++|+|+++|.+|
T Consensus 326 ~~~-~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~ 402 (585)
T TIGR01192 326 PEL-PNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTV 402 (585)
T ss_pred CCC-CCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhC
Confidence 011 1124569999999999753 3689999999999999999999999999999999999999988
Q ss_pred -------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHH
Q 000845 503 -------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQL 533 (1255)
Q Consensus 503 -------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaL 533 (1255)
..+..+|+|.+|.+|++|.+|||||||||+|
T Consensus 403 ~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~l 482 (585)
T TIGR01192 403 TRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAI 482 (585)
T ss_pred CHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHH
Confidence 1245689999999999999999999999999
Q ss_pred HHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcch
Q 000845 534 ARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQ 613 (1255)
Q Consensus 534 ARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~ 613 (1255)
|||++++|+++|||||||+||+++++.+. +++....+++|+|+|||+++.++.||+|++|++|++++.|+++++.++.+
T Consensus 483 ARall~~p~ililDEpts~LD~~~~~~i~-~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 561 (585)
T TIGR01192 483 ARAILKNAPILVLDEATSALDVETEARVK-NAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDG 561 (585)
T ss_pred HHHHhcCCCEEEEECCccCCCHHHHHHHH-HHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCC
Confidence 99999999999999999999999988775 55566667999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHh
Q 000845 614 EFQDLVNAH 622 (1255)
Q Consensus 614 ~~~~l~~~~ 622 (1255)
.|.+++..+
T Consensus 562 ~y~~l~~~~ 570 (585)
T TIGR01192 562 RFYKLLRRS 570 (585)
T ss_pred hHHHHHHhC
Confidence 888887654
No 86
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.5e-54 Score=580.52 Aligned_cols=516 Identities=17% Similarity=0.192 Sum_probs=384.4
Q ss_pred HHHHHHHHHHHHHHhhhcC---C-CCCC--hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000845 698 LIFLVAQILQSLWIATYIP---S-TSIS--RL-KLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAP 770 (1255)
Q Consensus 698 ~~~~~~~~~~~~~l~~~~~---~-~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p 770 (1255)
++..++.++.|+.+...++ . .... .. .+++.++++.++..++.....+.....+.++-..+...+|+++++.+
T Consensus 90 ~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~ 169 (1490)
T TIGR01271 90 YFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTLKLS 169 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4455566666666553321 1 1111 11 12223333334444555555566667777788888888899999999
Q ss_pred cccccccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 771 MAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKEL 850 (1255)
Q Consensus 771 ~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l 850 (1255)
...+++.++|+++|+++.|++.++..+... ..+....+.++++++++.....+.+++.+.++++++.++.+..+.....
T Consensus 170 ~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~~~~~ 248 (1490)
T TIGR01271 170 SRVLDKISTGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQKMMPY 248 (1490)
T ss_pred HHHhcCCCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999866543 3344555555666666655555555555555566666777777777788
Q ss_pred HHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 851 MRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALCTTL 930 (1255)
Q Consensus 851 ~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~ 930 (1255)
++..........+...|.++|+++||.|++|+.|.+++.+..+...+..........|...... ....+..++.+..+.
T Consensus 249 ~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~~y~ 327 (1490)
T TIGR01271 249 RDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFF-FSGFFVVFLSVVPYA 327 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 8888888889999999999999999999999999999888887766655444333323222211 111122222222222
Q ss_pred hccCcccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEE
Q 000845 931 LHKGHKGAGYTGMALSFGLSLNDFL-VYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDL 1009 (1255)
Q Consensus 931 ~~~~~~~~~~~g~~l~~~~~~~~~l-~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nv 1009 (1255)
+. +..+++.+-.++++...+...+ ..+...+..+....+|++|+.+|+..++..+.. . . +....|+++|+
T Consensus 328 ~~-~~~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~---~----~-~~~~~i~~~~~ 398 (1490)
T TIGR01271 328 LI-KGIILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLE---Y----N-LTTTEVEMVNV 398 (1490)
T ss_pred Hh-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc---c----c-CCCCceEEecc
Confidence 22 2234443333344444444443 346666777788899999999999765432110 0 0 11235888888
Q ss_pred EEEeCCC--------------------------------CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC
Q 000845 1010 QIRYRPN--------------------------------APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP 1057 (1255)
Q Consensus 1010 s~~Y~~~--------------------------------~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~ 1057 (1255)
+|.|+.. ..++|+|+||+|++||.++|+||+|||||||+++|+|+++|
T Consensus 399 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~~~ 478 (1490)
T TIGR01271 399 TASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGELEP 478 (1490)
T ss_pred eEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 8888421 13589999999999999999999999999999999999999
Q ss_pred CCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCcc
Q 000845 1058 TGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLD 1137 (1255)
Q Consensus 1058 ~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gld 1137 (1255)
++|+|.+|| +|+||||+|.+|++||||||.+...++++...+ +++.|+|.+.+..+|+|.+
T Consensus 479 ~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~------~~~~~~L~~~l~~l~~g~~ 539 (1490)
T TIGR01271 479 SEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTS------VIKACQLEEDIALFPEKDK 539 (1490)
T ss_pred CCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccccchHHHHH------HHHHHhHHHHHHhcccccc
Confidence 999999998 499999999999999999998655555555544 8899999999999999999
Q ss_pred chhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHH-HHHHcCCcEEEEeccCchhhhhcCEEEE
Q 000845 1138 SLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNT-IRREFANCTVITVAHRIATVMDCNMVLS 1216 (1255)
Q Consensus 1138 t~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~-l~~~~~~~TvI~IaHrl~ti~~~DrI~v 1216 (1255)
|.+|++|.+||||||||++||||++++|+|+|||||||+||+++++.|.+. +++..+++|+|+|||+++.+..||+|++
T Consensus 540 t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~ 619 (1490)
T TIGR01271 540 TVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILL 619 (1490)
T ss_pred ccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEE
Confidence 999999999999999999999999999999999999999999999999874 6777789999999999999999999999
Q ss_pred EeCCEEEEEcChhHHhhcCChHHHHHHH
Q 000845 1217 MSDGKLVEYDEPKKLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1217 l~~G~ive~G~~~eLl~~~~~~f~~l~~ 1244 (1255)
|++|+|++.|+|+++.+. ++.|.+.+.
T Consensus 620 l~~g~i~~~g~~~~l~~~-~~~~~~~~~ 646 (1490)
T TIGR01271 620 LHEGVCYFYGTFSELQAK-RPDFSSLLL 646 (1490)
T ss_pred EECCEEEEEcCHHHHHhc-ChHHHHHHh
Confidence 999999999999999875 566766664
No 87
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=8.4e-54 Score=529.28 Aligned_cols=459 Identities=21% Similarity=0.202 Sum_probs=344.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 120 ALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKI 199 (1255)
Q Consensus 120 ~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (1255)
.+++.+++.++...++.++..++..+.|++++.+++.+..... ....+.++++++++.++..++.....+...+.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRS 84 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667777778888889999999999999999987653221 111111112222233444454445556677788888
Q ss_pred HHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000845 200 RSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFW-FHQIWSTSLQLCIAVVVVYYSVGLATIATLIVMI 278 (1255)
Q Consensus 200 r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~~~ 278 (1255)
...+...+|+|.++++....++.++|+++|.++.|++++.+.+.. +..+....+.++++++++++.-.+.+++.++.++
T Consensus 85 ~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~ 164 (529)
T TIGR02868 85 LGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLL 164 (529)
T ss_pred HHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 899999999999999988778889999999999999999987653 3344444444444544444332234444444434
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 279 LTVLGNSPLA-KLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVLF 357 (1255)
Q Consensus 279 ~~~~~~~~~~-~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 357 (1255)
++..+...+. +...+..++..+..++..+...|.++|+++||.|++|+.+.+++.+..++..+...+.....+....+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (529)
T TIGR02868 165 LAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQ 244 (529)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333333333 334556677788889999999999999999999999999999988866655555444444443333222
Q ss_pred HHHHH--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhc-
Q 000845 358 WSSPI--LIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQ- 434 (1255)
Q Consensus 358 ~~~~~--~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~- 434 (1255)
..... .+..+.++.+.+.++.++++.+.+.+.+...+..|+..++..+..+.++++|++|+.++++.++..+.....
T Consensus 245 ~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~ 324 (529)
T TIGR02868 245 LLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPA 324 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCC
Confidence 22222 233345666667788899999999999999999999999999999999999999999999876532111000
Q ss_pred ccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------------
Q 000845 435 VCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------------ 502 (1255)
Q Consensus 435 ~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------------ 502 (1255)
.....+..+.|+++|++|+|+.+ +++|+|+||++++||.++||||+|||||||+++|+|+++|.+|
T Consensus 325 ~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~ 402 (529)
T TIGR02868 325 AGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL 402 (529)
T ss_pred CcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH
Confidence 00011123569999999999754 3699999999999999999999999999999999999999988
Q ss_pred ------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHH
Q 000845 503 ------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLA 534 (1255)
Q Consensus 503 ------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLA 534 (1255)
+++..+|+|++|.|||+|.+|||||||||+||
T Consensus 403 ~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiA 482 (529)
T TIGR02868 403 QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALA 482 (529)
T ss_pred HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHH
Confidence 24678999999999999999999999999999
Q ss_pred HHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCC
Q 000845 535 RALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQV 582 (1255)
Q Consensus 535 RAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l 582 (1255)
||++++|+|+||||||||||+++++.|.+.+ ....+++|+|+||||+
T Consensus 483 Rall~~~~iliLDE~TSaLD~~te~~I~~~l-~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 483 RALLADAPILLLDEPTEHLDAGTESELLEDL-LAALSGKTVVVITHHL 529 (529)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHhcCCCEEEEEecCC
Confidence 9999999999999999999999998886654 4567899999999985
No 88
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.3e-54 Score=484.88 Aligned_cols=473 Identities=22% Similarity=0.281 Sum_probs=374.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCccc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000845 139 KVISISAGPLFLKAFISAAEGEIIF---KYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSLCAAISSKQLRLS 215 (1255)
Q Consensus 139 ~~~~~~~~p~ll~~li~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~iy~K~l~l~ 215 (1255)
.-.+....|++++.+++.+++.+.. .......+.+.+++.++.+++...-.+.......++-.....-+|+..+.++
T Consensus 42 aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld 121 (591)
T KOG0057|consen 42 AKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLD 121 (591)
T ss_pred hhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3456677899999999998632221 1233445566666777777766666666666677777778888999999999
Q ss_pred hhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 000845 216 NAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGLATI-ATLIVMILTVLGNSPLAKLQHK 293 (1255)
Q Consensus 216 ~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~~~l-~g~~~~~~~~~~~~~~~~~~~~ 293 (1255)
.....+..+|++.+.|..-...|.+.+. .+..+.-..+++.+....+++..|.+.. +.+..+.....+...++++..+
T Consensus 122 ~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~ 201 (591)
T KOG0057|consen 122 LSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNR 201 (591)
T ss_pred HHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHH
Confidence 8888888999999999999988888765 3445666777888888899999998543 4444455556677778899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 294 YQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEK-LRSEEYGWLKVLQLQKGYYMVLFWSSPILIGAATLLTC 372 (1255)
Q Consensus 294 ~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~-~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 372 (1255)
++++++++.|+..+..-+.|.|..+||.|+-|+...+++.. +++.|-..++..+.+...+. .- -..|....++..|
T Consensus 202 fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnf-gQ--~~iFsv~~~~im~ 278 (591)
T KOG0057|consen 202 FRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNF-GQ--KAIFSVALTFIMV 278 (591)
T ss_pred HHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHH-HH--HHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999866 55566555544444332221 10 0011112222222
Q ss_pred H----HhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhcccccccCcceEEEE
Q 000845 373 Y----FLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRAELEHSIFIK 448 (1255)
Q Consensus 373 ~----~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~i~~~ 448 (1255)
. +..+.+|.+...-..+++..|..|++.+...+..+.++..-+.-.....+.++..... ..| ....++.|+|+
T Consensus 279 l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~--~~~-i~~~~~~I~F~ 355 (591)
T KOG0057|consen 279 LGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA--ALP-IELFGGSIEFD 355 (591)
T ss_pred HHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc--cCC-cccCCCcEEEE
Confidence 2 3456789999888889999999999999999999999888877665554443322111 011 11145679999
Q ss_pred eeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC--------------------------
Q 000845 449 SADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG-------------------------- 502 (1255)
Q Consensus 449 ~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G-------------------------- 502 (1255)
|++|+|+++ +++|+++||+||+||.+||||++||||||++++|+++++ .+|
T Consensus 356 dV~f~y~~k--~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQ 432 (591)
T KOG0057|consen 356 DVHFSYGPK--RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQ 432 (591)
T ss_pred eeEEEeCCC--CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCC
Confidence 999999854 479999999999999999999999999999999999999 777
Q ss_pred -----------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCEEEEe
Q 000845 503 -----------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLD 547 (1255)
Q Consensus 503 -----------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLD 547 (1255)
+-+..||+|++|.|||+|..||||||||||||||+.+||+|++||
T Consensus 433 d~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~D 512 (591)
T KOG0057|consen 433 DSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLD 512 (591)
T ss_pred cccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEec
Confidence 236789999999999999999999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHHHHHHHH
Q 000845 548 DPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEFQDLVNA 621 (1255)
Q Consensus 548 dp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~~~l~~~ 621 (1255)
||||+||.+|++.|++.. .+.+.+||+|+|.||+++++.+|+|+++++|++.+.|+|+|++..++.+.+++..
T Consensus 513 EaTS~LD~~TE~~i~~~i-~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~~ 585 (591)
T KOG0057|consen 513 EATSALDSETEREILDMI-MDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWTT 585 (591)
T ss_pred CcccccchhhHHHHHHHH-HHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhcc
Confidence 999999999999998655 4578899999999999999999999999999999999999999977777777644
No 89
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.9e-53 Score=526.10 Aligned_cols=462 Identities=21% Similarity=0.237 Sum_probs=352.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 126 WKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSLCA 205 (1255)
Q Consensus 126 ~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~ 205 (1255)
|+.++..+++.++..++..+.|++++++++.+..+.......+.+++.++++.++..++.....+...+++.++...+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677788888999999999999999999987322111222333444555555666666666777888888999999999
Q ss_pred HHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000845 206 AISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGLATIATLIVMILTVLGN 284 (1255)
Q Consensus 206 ~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~~~~~~~~~ 284 (1255)
.+|+|.++++.....+.++|+++|.+++|++++.+.+. .+..++...+.+++++++++..-.+.+++.++.+++...+.
T Consensus 82 ~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~ 161 (529)
T TIGR02857 82 RLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFM 161 (529)
T ss_pred HHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 99999999988777888999999999999999997654 35555555555555544444221223333333333333344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q 000845 285 SPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYG----WLKVLQLQKGYYMVLFWSS 360 (1255)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~----~~~~~~~~~~~~~~~~~~~ 360 (1255)
.++.++..+..++.++..+++.+.+.|.++++++||.|++|+.+.+++.+.-++..+ ..+.......+..++.. .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (529)
T TIGR02857 162 ILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT-L 240 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 566777778888888999999999999999999999999999998888654433322 22222222222221111 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhccccccc
Q 000845 361 PILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRAE 440 (1255)
Q Consensus 361 ~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~ 440 (1255)
..++. ..++.+.+..+.+|++.+++++.+...+..|+..+...+..+.+++++++|+.++++.++.+.... ..+ .+
T Consensus 241 ~~~~~-~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~-~~~--~~ 316 (529)
T TIGR02857 241 SVALV-AVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA-PVT--AA 316 (529)
T ss_pred HHHHH-HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc-CCC--CC
Confidence 11111 223334444778999999999999999999999999999999999999999999998553221111 111 11
Q ss_pred CcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------------------
Q 000845 441 LEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------------------ 502 (1255)
Q Consensus 441 ~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------------------ 502 (1255)
..+.|+++|++|+|+..+ +++|+|+||++++|+.++|+||+|||||||+++|+|+++|.+|
T Consensus 317 ~~~~i~~~~v~f~y~~~~-~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGRR-APALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCeEEEEEEEEECCCCC-cccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 234799999999998543 4899999999999999999999999999999999999999998
Q ss_pred -------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHcc
Q 000845 503 -------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQ 539 (1255)
Q Consensus 503 -------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~ 539 (1255)
++++.+|+|.+|.+||+|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 2467899999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEE
Q 000845 540 DRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLI 594 (1255)
Q Consensus 540 ~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl 594 (1255)
+|+|+||||||||||+++++.+++ .+..+.+++|+|+||||++.++.||+|++|
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTE-ALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999998865 455666899999999999999999999985
No 90
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.8e-54 Score=571.18 Aligned_cols=215 Identities=22% Similarity=0.281 Sum_probs=175.1
Q ss_pred eEEEEEEEEEeCC-----------CCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCCEEEEcCEeC
Q 000845 1003 KVEIYDLQIRYRP-----------NAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP--TGGKIIIDGLDI 1069 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~-----------~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~--~~G~I~idG~di 1069 (1255)
.+.|+||++.++. +...+|+|+|++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6999999998741 223699999999999999999999999999999999999763 689999999886
Q ss_pred CCCChHHhhcccEEEccCCccCC-CchhhhcccC------CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcC
Q 000845 1070 TTIGLYDLRSNLGIIPQDPTLFS-GSVRYNLDPL------SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQ 1142 (1255)
Q Consensus 1070 ~~i~~~~lR~~i~~vpQdp~Lf~-gTIr~Nl~~~------~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e 1142 (1255)
. ...+|+.++||+|++.++. .|++|||.+. ...++++..+ ...++++..+|.+. .|+.+|.
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~--~v~~vl~~lgL~~~-------~~~~vg~ 1014 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMM--FVDEVMELVELDNL-------KDAIVGL 1014 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHH--HHHHHHHHCCChhH-------hCCccCC
Confidence 4 2456788999999998776 4999999642 1223332211 01126777776543 3566664
Q ss_pred CC-CCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchh-h-hhcCEEEEEe
Q 000845 1143 DG-ANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIAT-V-MDCNMVLSMS 1218 (1255)
Q Consensus 1143 ~G-~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~t-i-~~~DrI~vl~ 1218 (1255)
.+ ..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. .++|||+++|+++. + ..||++++|+
T Consensus 1015 ~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~ 1094 (1470)
T PLN03140 1015 PGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1094 (1470)
T ss_pred CCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEc
Confidence 33 5799999999999999999999999999999999999999999999864 47899999999984 4 5599999999
Q ss_pred C-CEEEEEcChh
Q 000845 1219 D-GKLVEYDEPK 1229 (1255)
Q Consensus 1219 ~-G~ive~G~~~ 1229 (1255)
+ |+++.+|++.
T Consensus 1095 ~gG~~v~~G~~~ 1106 (1470)
T PLN03140 1095 RGGQVIYSGPLG 1106 (1470)
T ss_pred CCCEEEEECCcc
Confidence 6 8999999864
No 91
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5.9e-55 Score=518.89 Aligned_cols=203 Identities=22% Similarity=0.310 Sum_probs=168.4
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcc
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSN 1080 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~ 1080 (1255)
+-.++++|+++.|.++ .++++++||.|.+|++||||||||+|||||+++|.|-..|.+|+|.+.- .-+
T Consensus 319 ~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~-----------~v~ 386 (530)
T COG0488 319 KLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE-----------TVK 386 (530)
T ss_pred CeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC-----------ceE
Confidence 3469999999999654 5799999999999999999999999999999999999999999998753 135
Q ss_pred cEEEccCC-ccCC-CchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1081 LGIIPQDP-TLFS-GSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1081 i~~vpQdp-~Lf~-gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
+||.+|+- .++. .|+-+++.... ...+.++.. .|.+.++...-. .++| ..||||||-|+.|
T Consensus 387 igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~------~L~~f~F~~~~~------~~~v----~~LSGGEk~Rl~L 450 (530)
T COG0488 387 IGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRA------YLGRFGFTGEDQ------EKPV----GVLSGGEKARLLL 450 (530)
T ss_pred EEEEEehhhhcCccCcHHHHHHhhCccccHHHHHH------HHHHcCCChHHH------hCch----hhcCHhHHHHHHH
Confidence 99999988 3443 37888876433 223555655 677776643322 2333 4699999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEE-cChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEY-DEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~-G~~~eLl~~ 1234 (1255)
|+.++.+|.+|||||||++||.+|-+.+.++|.+. ..|||+|||+.+.+.. |++|+++++ ++.++ |.+++-.+.
T Consensus 451 a~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 451 AKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred HHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 99999999999999999999999999999999863 4599999999999987 999999999 88887 788776654
No 92
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=8.6e-53 Score=565.34 Aligned_cols=528 Identities=17% Similarity=0.202 Sum_probs=401.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhc---CCCCCChh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000845 695 FAYLIFLVAQILQSLWIATYI---PSTSISRL---KLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFR 768 (1255)
Q Consensus 695 ~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~ 768 (1255)
++.++..++..+.|+.+.+.. .++..... .+++.+++..++..++.....+.....+.+.-..+...+|+++++
T Consensus 251 ~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ 330 (1560)
T PTZ00243 251 PFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNALIFEKCFT 330 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344555566666666665433 12221111 112222233334444444555666778888888888999999999
Q ss_pred CCccccc--ccccchhHHHHhchhhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 769 APMAFYD--STPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFAT 846 (1255)
Q Consensus 769 ~p~~~f~--~~~~G~il~r~s~D~~~id~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 846 (1255)
.+...+. +.++|+++|.++.|++.+...+.. +..+....+.++++++++.....+.+++.++++++++.++.+..+.
T Consensus 331 ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~-~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~ 409 (1560)
T PTZ00243 331 ISSKSLAQPDMNTGRIINMMSTDVERINSFMQY-CMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVTLPLNGAIMKH 409 (1560)
T ss_pred CChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9887776 568899999999999999988744 4556667777777777776666666666666666777788888888
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 847 AKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSAL 926 (1255)
Q Consensus 847 ~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 926 (1255)
....++.....+....+...|.++|+++||.++||+.|.+++.+..+...+..........+..........++. ++.+
T Consensus 410 ~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~p~l~~-~~~f 488 (1560)
T PTZ00243 410 QMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFVNNATPTLMI-AVVF 488 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 888888888888889999999999999999999999999999988777766654444444443332222222222 2222
Q ss_pred HHHHhccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcc------cc--------c--
Q 000845 927 CTTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPE------LV--------Q-- 990 (1255)
Q Consensus 927 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~------~~--------~-- 990 (1255)
..+....+.++++.+-.++++...+..++..+...+..+....+|++|+.+|++.++.... .. .
T Consensus 489 ~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~ 568 (1560)
T PTZ00243 489 TVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYWREQREHSTAC 568 (1560)
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccchhhccccccccccc
Confidence 2333446778888888888888888888888888999999999999999999976431100 00 0
Q ss_pred C-----CC-------C---------------------------CCCCCCCceEEEEEEEEEeC-----------------
Q 000845 991 K-----NS-------P---------------------------APDWPPTGKVEIYDLQIRYR----------------- 1014 (1255)
Q Consensus 991 ~-----~~-------~---------------------------~~~~p~~g~I~~~nvs~~Y~----------------- 1014 (1255)
. .. + +..++..+.+.++|+++.++
T Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (1560)
T PTZ00243 569 QLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHIVEGGTGGGHE 648 (1560)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccc
Confidence 0 00 0 00011124577888777642
Q ss_pred ---------------------CCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC
Q 000845 1015 ---------------------PNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG 1073 (1255)
Q Consensus 1015 ---------------------~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~ 1073 (1255)
.+..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+
T Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~~--------- 719 (1560)
T PTZ00243 649 ATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVWA--------- 719 (1560)
T ss_pred ccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEE---------
Confidence 12345899999999999999999999999999999999999999999986
Q ss_pred hHHhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1074 LYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1074 ~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
+++|+|+||+|.+|++||+|||.++....++++.+ +++.|++.+.++.+|+|++|.++++|.+|||||||
T Consensus 720 ----~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~------~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSGGQkq 789 (1560)
T PTZ00243 720 ----ERSIAYVPQQAWIMNATVRGNILFFDEEDAARLAD------AVRVSQLEADLAQLGGGLETEIGEKGVNLSGGQKA 789 (1560)
T ss_pred ----CCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHH------HHHHhhhHHHHHHhhccchHHhcCCCCCCCHHHHH
Confidence 35799999999999999999998766554455555 88999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHH-HHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHh
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQN-TIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~-~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
|++||||++++|+|+|||||||+||+++.+.+.+ .+....+++|+|+|||+++.+..||+|++|++|++++.|++++++
T Consensus 790 RvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~~~~l~ 869 (1560)
T PTZ00243 790 RVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVEFSGSSADFM 869 (1560)
T ss_pred HHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999998877754 455555789999999999999999999999999999999999998
Q ss_pred hcCChHHHHHHHH
Q 000845 1233 RRQDSLFAQLVKE 1245 (1255)
Q Consensus 1233 ~~~~~~f~~l~~~ 1245 (1255)
+. +.|.++...
T Consensus 870 ~~--~~~~~~~~~ 880 (1560)
T PTZ00243 870 RT--SLYATLAAE 880 (1560)
T ss_pred hC--hHHHHHHHh
Confidence 64 568887764
No 93
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=8e-54 Score=525.02 Aligned_cols=191 Identities=22% Similarity=0.304 Sum_probs=160.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
-++++|++++|.. ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5999999999953 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEccCCcc-CCCchhhhcccCC-CCC-hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1083 IIPQDPTL-FSGSVRYNLDPLS-QFT-DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1083 ~vpQdp~L-f~gTIr~Nl~~~~-~~s-d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
|+||++.+ ++.|+++|+.... ... +....+ +++..++.+.... ....||||||||++|||
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~------~L~~l~l~~~~~~-----------~~~~LSGGe~QRvaiAr 466 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSE------IIKPLQLERLLDK-----------NVKDLSGGELQRVAIAA 466 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHH------HHHHCCCHHHHhC-----------CcccCCHHHHHHHHHHH
Confidence 99999875 4569999996421 122 122222 6777777654322 23479999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcC
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1227 (1255)
||+++|+||||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++ ++...|+
T Consensus 467 aL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 467 CLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 99999999999999999999999999999998643 7899999999999876 999999965 8887776
No 94
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.3e-54 Score=481.86 Aligned_cols=239 Identities=38% Similarity=0.690 Sum_probs=229.1
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
|.|+|+||+++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ ++|+|++||.++.+++...+|++|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999997656679999999999999999999999999999999999998 799999999999999999999999
Q ss_pred EEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHH
Q 000845 1082 GIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVV 1161 (1255)
Q Consensus 1082 ~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAl 1161 (1255)
+||||+|.+|++|+++|+++++..+++++++ +++.+++.+++..+|++||+.++++|.+||||||||+|||||+
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~------~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRal 153 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWK------VAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSV 153 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHH------HHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999887778899998 9999999999999999999999999999999999999999999
Q ss_pred ccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHH
Q 000845 1162 LRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQ 1241 (1255)
Q Consensus 1162 L~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~ 1241 (1255)
+++|+||||||||++||+++++.+++.|++.+.++|+|+||||++++..||||+||++|++++.|+|++|+++ .+.|++
T Consensus 154 l~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~ 232 (275)
T cd03289 154 LSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQ 232 (275)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHH
Confidence 9999999999999999999999999999988889999999999999999999999999999999999999996 689999
Q ss_pred HHHHHHH
Q 000845 1242 LVKEYWS 1248 (1255)
Q Consensus 1242 l~~~~~~ 1248 (1255)
++++.+.
T Consensus 233 ~~~~~~~ 239 (275)
T cd03289 233 AISPSDR 239 (275)
T ss_pred HHhhcch
Confidence 9998764
No 95
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-53 Score=468.81 Aligned_cols=482 Identities=20% Similarity=0.300 Sum_probs=351.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCccchhH-HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 134 FFALIKVISISAGPLFLKAFISAAEGEIIFKYE-IYSLAISLFLVKC--VESLAGRHWFFQSRLTGLKIRSSLCAAISSK 210 (1255)
Q Consensus 134 ~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~l~~~iy~K 210 (1255)
++..+.-++...-|.+.+.+++.+..+....+. .+.+++..|+-.. +..+..+.-.|..-++.----..+-..+|++
T Consensus 222 ~ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrH 301 (790)
T KOG0056|consen 222 FLLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRH 301 (790)
T ss_pred HHHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHH
Confidence 444455566777799999999988865443332 2233322222111 1123333333333333333334556677777
Q ss_pred HhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHH
Q 000845 211 QLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWF-HQIWSTSLQLCIAVVVVYYSVGL-ATIATLIVMILTVLGNSPLA 288 (1255)
Q Consensus 211 ~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~-~~~~~~pl~i~v~~~lL~~~lG~-~~l~g~~~~~~~~~~~~~~~ 288 (1255)
.+.||....-...+|++...|...++.+. +..++ ..+--..+.+++++++.+....| -.++.+..|.+...+...+.
T Consensus 302 lh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iT 380 (790)
T KOG0056|consen 302 LHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKIT 380 (790)
T ss_pred HHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeee
Confidence 77776544344568999998887776665 33222 22222334555555544444433 44444555555556666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 289 KLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVI----EKLRSEEYGWLKVLQLQKGYYMVLFWSSPILI 364 (1255)
Q Consensus 289 ~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i----~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~ 364 (1255)
.+..++++++...-.+--....+.|-+..+||.|+.|++..+++ .+.-++|-+.+....++......+. .--++
T Consensus 381 eWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii--~lgll 458 (790)
T KOG0056|consen 381 EWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGII--GLGLL 458 (790)
T ss_pred hhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh--hhHHh
Confidence 88888888887776666666778888999999999998766664 4445555544433333332222211 11123
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCcchhcccccccCcc
Q 000845 365 GAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPE-LQNSDMQQVCSRAELEH 443 (1255)
Q Consensus 365 ~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e-~~~~~~~~~~~~~~~~~ 443 (1255)
...-+.+|.+..+.+|++...-..+..-.|.+||+.+...+..+++..+-++|+.+.+++++ +.+.+. ..|-.. .++
T Consensus 459 ~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~-a~pl~~-~~G 536 (790)
T KOG0056|consen 459 AGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPG-APPLKV-TQG 536 (790)
T ss_pred hhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCC-CCCccc-cCC
Confidence 33445666666788999987777778888999999999999999999999999999998754 322211 111111 568
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC---------------------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG--------------------- 502 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G--------------------- 502 (1255)
.|+|+|++|+|++. +|+|+||||++++|+.+|+|||+|+||||+++.|.++++..+|
T Consensus 537 ~i~fsnvtF~Y~p~--k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~I 614 (790)
T KOG0056|consen 537 KIEFSNVTFAYDPG--KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSI 614 (790)
T ss_pred eEEEEEeEEecCCC--CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhc
Confidence 89999999999764 6999999999999999999999999999999999999999988
Q ss_pred ----------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCC
Q 000845 503 ----------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRD 542 (1255)
Q Consensus 503 ----------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ 542 (1255)
+.|..+|+|+.|.|||+|-.||||+|||||+||++.++|.
T Consensus 615 GVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~ 694 (790)
T KOG0056|consen 615 GVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPS 694 (790)
T ss_pred CcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCc
Confidence 2366899999999999999999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhc-chHHHHHHHH
Q 000845 543 IYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVT-SQEFQDLVNA 621 (1255)
Q Consensus 543 ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~-~~~~~~l~~~ 621 (1255)
|++|||+|||||.++++.| +.++..+.++||.|+|+||++++-+||.|+++++|+|+|.|+|+|+..+ ++.|.++++.
T Consensus 695 iIlLDEATSALDT~tER~I-QaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 695 IILLDEATSALDTNTERAI-QAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred EEEEcchhhhcCCccHHHH-HHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 9999999999999999888 8899889999999999999999999999999999999999999999976 7789999875
Q ss_pred hh
Q 000845 622 HK 623 (1255)
Q Consensus 622 ~~ 623 (1255)
+.
T Consensus 774 qq 775 (790)
T KOG0056|consen 774 QQ 775 (790)
T ss_pred HH
Confidence 44
No 96
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.8e-50 Score=454.74 Aligned_cols=498 Identities=21% Similarity=0.276 Sum_probs=345.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 116 SILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEII-FKYEIYSLAISLFLVKCVESLAGRHWFFQSRL 194 (1255)
Q Consensus 116 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1255)
++++..++ .|+.++++.++.++..+....--.+=+++|..-.-... ....-++-+++.=+..+.++....--...++.
T Consensus 6 p~i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~ 84 (573)
T COG4987 6 PYLRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHD 84 (573)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 33444444 66677777666665554443322223444432111111 11122222334444455566555444666777
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH--HHHHHHHHHhHHHHH
Q 000845 195 TGLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWFHQIWSTSLQLCI--AVVVVYYSVGLATIA 272 (1255)
Q Consensus 195 ~~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~v--~~~lL~~~lG~~~l~ 272 (1255)
...++-+.+.-.+|+|..-++......+.+|++.|.+..|++.++...-.+...|...+-++. .+.+-+.-++.+.+.
T Consensus 85 AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll 164 (573)
T COG4987 85 ATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLL 164 (573)
T ss_pred HHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 788999999999999999998877778899999999999999999987665555543333322 222324444456666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 273 TLIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGY 352 (1255)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~ 352 (1255)
++..++.++.+.....+...+..++....+..=-+...+.++|..-.+++|-++.+.+.+++.-..=.+.-++...+...
T Consensus 165 ~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~ 244 (573)
T COG4987 165 GLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGL 244 (573)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655555556666667766776666666666678889999999999999999999988765333222222222222222
Q ss_pred HHHHHHHHHHHH---HHHHHHHHHHhCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000845 353 YMVLFWSSPILI---GAATLLTCYFLGIPLN-PSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQ 428 (1255)
Q Consensus 353 ~~~~~~~~~~~~---~~~~f~~~~~~~~~L~-~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~ 428 (1255)
..++......++ ..++++.-.-. +..+ +..+...+..|..+..-....|.++..+.+...|.+|+.+.++.++..
T Consensus 245 ~~a~~~l~~g~~v~~~l~w~a~~~~~-G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~ 323 (573)
T COG4987 245 SDAILLLIAGLLVIGLLLWMAAQVGA-GALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEV 323 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcC-CCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCccc
Confidence 222221111111 11222221111 3333 233333333333333212233366777888999999999999876543
Q ss_pred CcchhcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------
Q 000845 429 NSDMQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------ 502 (1255)
Q Consensus 429 ~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------ 502 (1255)
..+.+..+. .+..++++|++|+|+.++ .++|+|+||++++||.+||+|++|||||||++.|.|-++|.+|
T Consensus 324 ~~~~~~~~~---~~~~l~~~~vsF~y~~~~-~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g 399 (573)
T COG4987 324 TFPDEQTAT---TGQALELRNVSFTYPGQQ-TKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNG 399 (573)
T ss_pred CCCccccCC---ccceeeeccceeecCCCc-cchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECC
Confidence 322111111 222799999999999764 5899999999999999999999999999999999999999998
Q ss_pred -------------------------------------------------------cccCCCCCCCccccccCCCcCChHH
Q 000845 503 -------------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQ 527 (1255)
Q Consensus 503 -------------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQ 527 (1255)
.-+...|+|.+|.+||+|..|||||
T Consensus 400 ~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE 479 (573)
T COG4987 400 VEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGE 479 (573)
T ss_pred cChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchH
Confidence 1245789999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhH
Q 000845 528 KQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDH 607 (1255)
Q Consensus 528 kqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~e 607 (1255)
|||++|||++.+|++++||||||.+||+.|++++.+.++ ..++|||+|+||||+..++.+|+|++|++|+++++|+|.+
T Consensus 480 ~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~-~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~ 558 (573)
T COG4987 480 RRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLF-EHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAE 558 (573)
T ss_pred HHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHH-HHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHh
Confidence 999999999999999999999999999999999986655 4567999999999999999999999999999999999999
Q ss_pred HhhcchHHHHHHH
Q 000845 608 LLVTSQEFQDLVN 620 (1255)
Q Consensus 608 l~~~~~~~~~l~~ 620 (1255)
++.+++.|.++.+
T Consensus 559 Ll~~~g~~~~l~q 571 (573)
T COG4987 559 LLANNGRYKRLYQ 571 (573)
T ss_pred hhccccHHHHHhc
Confidence 9998888877653
No 97
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=8.2e-50 Score=493.66 Aligned_cols=475 Identities=19% Similarity=0.157 Sum_probs=336.8
Q ss_pred hhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 115 PSILRALIS-CHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSR 193 (1255)
Q Consensus 115 ~~l~~~l~~-~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1255)
+.+++ +++ .+++.++.+.++.++..++..+.|.+++.+++...... . ....+.+++ .++..++.....+...
T Consensus 6 ~~l~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~--~-~~~~~~~~~---~~~~~~~~~~~~~~~~ 78 (555)
T TIGR01194 6 GEILA-LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLG--Q-GSLFSFGGL---CLLALLFRIGADIFPA 78 (555)
T ss_pred HHHHH-HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--c-hHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 34444 566 77888888889999999999999999998875321110 0 111111122 2222333444455667
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000845 194 LTGLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWFHQIWSTSLQLCIAVVVVYYSVGLATIAT 273 (1255)
Q Consensus 194 ~~~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g 273 (1255)
+.+.++...+...+|+|.++++.....+.++|++++.+++|++.+.+....+..+....+.++++++++++.-.+.+++.
T Consensus 79 ~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li~ 158 (555)
T TIGR01194 79 YAGMHIIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAIT 158 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 78888888999999999999998877788999999999999999998765555555555555555555443322244444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchH--HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 274 LIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDS--YFKNVIEKLRSEEYGWLKVLQLQKG 351 (1255)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~--~~~~~i~~~R~~El~~~~~~~~~~~ 351 (1255)
++++++.+.+..+..++..+..++..+..++..+...|.+.|+++||.++.++ ...+++.+.-++-.+...+......
T Consensus 159 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (555)
T TIGR01194 159 ISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFI 238 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 44444545555556666777777888888899999999999999999999854 3334433322221111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-
Q 000845 352 YYMVLFWSSPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNS- 430 (1255)
Q Consensus 352 ~~~~~~~~~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~- 430 (1255)
....+....+.++..+.+. +....+.++.+.+++.+.+...+..|+..+...++.+.++.+|++||.++++.++.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~ 317 (555)
T TIGR01194 239 AAENFGQLLFFLLIGCALF-AAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPE 317 (555)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 1111111111111111110 01112578999999999999999999999999999999999999999999864221100
Q ss_pred ---ch-hcc--cccccCcceEEEEeeEEEecCCC--CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC
Q 000845 431 ---DM-QQV--CSRAELEHSIFIKSADLSWEADL--LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG 502 (1255)
Q Consensus 431 ---~~-~~~--~~~~~~~~~i~~~~~~f~w~~~~--~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G 502 (1255)
+. ... .........|+++|++|+|+..+ .+++|+|+||++++|++++|+||+|||||||+++|+|+++|.+|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G 397 (555)
T TIGR01194 318 LELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEG 397 (555)
T ss_pred ccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCc
Confidence 00 000 00001235799999999997532 24799999999999999999999999999999999999999998
Q ss_pred ----------------------------------------------------------cccCCCCCCCccccccCCCcCC
Q 000845 503 ----------------------------------------------------------MDLKMLPFGDLTQIGERGVNLS 524 (1255)
Q Consensus 503 ----------------------------------------------------------~Di~~lp~gd~T~iGe~G~~LS 524 (1255)
.++..+|+|++|. .+||
T Consensus 398 ~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LS 472 (555)
T TIGR01194 398 EILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDEGEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALS 472 (555)
T ss_pred EEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhcccccchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCC
Confidence 1244567777763 7899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCccccCCEEEEEeCCEEEEe
Q 000845 525 GGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGA-LSKKTVLLVTHQVDFLPAFDSILLISGGEIIQA 602 (1255)
Q Consensus 525 GGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~-l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~ 602 (1255)
|||||||+||||++++|+|+|||||||+||+++++.+.+.++... .+++|+|+|||+++.+..||+|++|++|++++.
T Consensus 473 gGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 473 TGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999998877666443 468999999999999999999999999999864
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.1e-48 Score=481.27 Aligned_cols=470 Identities=17% Similarity=0.149 Sum_probs=329.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 117 ILRALISCHWKSILFSGFFALIKVISISA-GPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRLT 195 (1255)
Q Consensus 117 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1255)
+++.+++.+++.++...++.++..++.++ .|++.+.+++.+... ....+.+++.+++..+ +.....+...+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 75 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTS---LLVLPEFLGLLLLLMA----VTLGSQLALTTL 75 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---chHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 46677788888888888888888888887 477778888765421 1111111111111111 222334445556
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000845 196 GLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWFHQIWSTSLQLCIAVVVVYYSVGLATIATLI 275 (1255)
Q Consensus 196 ~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~ 275 (1255)
+.++...+...+|+|.++++....++..+|++.|.++.|++.+..++..+..++...+.++++++++++.-++.+++.++
T Consensus 76 ~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 155 (547)
T PRK10522 76 GHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAI 155 (547)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 66777778888899999998877788899999999999999998876666777778887777777776554446666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 276 VMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYA--WDSYFKNVIEKLRSEEYGWLKVLQLQKGYY 353 (1255)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~--wE~~~~~~i~~~R~~El~~~~~~~~~~~~~ 353 (1255)
++++...+..++.++..+..++..+..++..+.+.|.+++++++++.+ .++.+.++..+..++-.+...+........
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (547)
T PRK10522 156 WMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSA 235 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHH
Confidence 666666777788888888889999999999999999999999997433 223444444432222111111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 000845 354 MVLFWSSPILIGAATLLTCYFLGI---PLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNS 430 (1255)
Q Consensus 354 ~~~~~~~~~~~~~~~f~~~~~~~~---~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~ 430 (1255)
..... ++..+.++.+.+.++ ..+...+.........+..|+..+...+..+.++..+++||.++++.|+.++.
T Consensus 236 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~ 311 (547)
T PRK10522 236 VNWSN----IMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF 311 (547)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 11111 111111222222211 12222222222223336689999999999999999999999999865432211
Q ss_pred chhcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cc
Q 000845 431 DMQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MD 504 (1255)
Q Consensus 431 ~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~D 504 (1255)
. ...+ .+....++++|++|+|+.+ +++|+|+||++++||.++|+||+|||||||+++|+|+++|.+| .|
T Consensus 312 ~-~~~~--~~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~ 386 (547)
T PRK10522 312 P-RPQA--FPDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKP 386 (547)
T ss_pred c-cccc--cCcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEE
Confidence 1 0011 1122479999999999743 4799999999999999999999999999999999999999998 00
Q ss_pred ------------------------------------------cCCCCCCCccccccC---CCcCChHHHHHHHHHHHHcc
Q 000845 505 ------------------------------------------LKMLPFGDLTQIGER---GVNLSGGQKQRIQLARALYQ 539 (1255)
Q Consensus 505 ------------------------------------------i~~lp~gd~T~iGe~---G~~LSGGQkqRIaLARAly~ 539 (1255)
++.++.++.+..+++ |.+||||||||++||||+++
T Consensus 387 ~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~LSgGq~qRl~lARal~~ 466 (547)
T PRK10522 387 VTAEQPEDYRKLFSAVFTDFHLFDQLLGPEGKPANPALVEKWLERLKMAHKLELEDGRISNLKLSKGQKKRLALLLALAE 466 (547)
T ss_pred CCCCCHHHHhhheEEEecChhHHHHhhccccCchHHHHHHHHHHHcCCchhhhccccCCCCCCCCHHHHHHHHHHHHHhc
Confidence 122333444445554 88999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCEEEEe
Q 000845 540 DRDIYLLDDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFLPAFDSILLISGGEIIQA 602 (1255)
Q Consensus 540 ~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~ 602 (1255)
+|+++|||||||+||+++++.+.+.+..... +++|+|+|||+++.+..||+|++|++|++++.
T Consensus 467 ~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 467 ERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999888665543322 48999999999999999999999999999876
No 99
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.1e-50 Score=459.99 Aligned_cols=213 Identities=21% Similarity=0.381 Sum_probs=171.0
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChH-Hhhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLY-DLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~-~lR~~i 1081 (1255)
.++++|++.. ..++|+||++++||.+||.|--|||+|-++++|+|..++.+|+|.+||.++.--++. ..+..|
T Consensus 263 ~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi 336 (500)
T COG1129 263 VLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDAIKAGI 336 (500)
T ss_pred EEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCC
Confidence 4677887642 158999999999999999999999999999999999999999999999988766655 688999
Q ss_pred EEEccCCc---c-CCCchhhhcccCC--CCChHHHHhccCchhHHHhccHHHHHHhhh---cCccchhcCCCCCCChhHH
Q 000845 1082 GIIPQDPT---L-FSGSVRYNLDPLS--QFTDQEIWEVTIPSQVLEKCQLREVIQEKK---EGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1082 ~~vpQdp~---L-f~gTIr~Nl~~~~--~~sd~ei~~~~~~~~al~~~~l~~~i~~lp---~gldt~v~e~G~~LSgGQr 1152 (1255)
+|||-|-. | ..-+|++|+.... .++..-+.+ ..-++.-..+++.++. .+.+.++ .+||||.+
T Consensus 337 ~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~-----~~~e~~~~~~~~~~l~Ik~~s~~~~v----~~LSGGNQ 407 (500)
T COG1129 337 AYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLID-----RRKERALAERYIRRLRIKTPSPEQPI----GTLSGGNQ 407 (500)
T ss_pred EeCCcccccCcCcCCCcHHHheehHhhhhhccccccC-----hHHHHHHHHHHHHhcCcccCCccchh----hcCCchhh
Confidence 99999874 4 4569999996431 111000111 1333444455665542 2444555 47999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|+++|||+|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+||-.+..+.. ||||+||.+|+|+..=+.++
T Consensus 408 QKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~~ 487 (500)
T COG1129 408 QKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDREE 487 (500)
T ss_pred hhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEecccc
Confidence 99999999999999999999999999999999999999875 57999999999999875 99999999999997544443
No 100
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.2e-47 Score=428.62 Aligned_cols=482 Identities=20% Similarity=0.233 Sum_probs=375.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 115 PSILRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVESLAGRHWFFQSRL 194 (1255)
Q Consensus 115 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1255)
.....+....+++.++..+++..+-.++.++.|+.+-++-|-+-...+ ...-..+.+....++++..++..--.+...|
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s-~~TLv~Ltvlal~ly~~~glLd~iR~~~l~R 89 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRS-VPTLVMLTVLALGLYAFQGLLDAIRSRVLVR 89 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566777778888888888888888999999988777665543221 2223445555666777777888878888999
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000845 195 TGLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-----WFHQIWSTSLQLCIAVVVVYYSVGLA 269 (1255)
Q Consensus 195 ~~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-----~~~~~~~~pl~i~v~~~lL~~~lG~~ 269 (1255)
++.++-..|..-||.-+++........-...+. -.|.+.+..++. -+.+....|+-++++ |++...+|+.
T Consensus 90 ig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~----LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~-fl~Hp~lG~~ 164 (580)
T COG4618 90 IGERLDRQLNGPVFAASFSAPLLRRGSGDGLQP----LRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVI-FLFHPWLGLI 164 (580)
T ss_pred HHHHHHHHhccHHHHHHHhhHHhhcCCCccccc----hhhHHHHHHHHcCCCcchhcCCchHHHHHHHH-HHHHHHHHHH
Confidence 999999999999999987544332221112233 357777766542 344555578766655 6777789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 270 TIATLIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQ 349 (1255)
Q Consensus 270 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~ 349 (1255)
+++|.++++++..++-.+++. -.++-.+..-+|....+..+.|..+|+.+|..+...++..+....-+....+..-.
T Consensus 165 a~~ga~iLv~la~ln~~~t~~---p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~ 241 (580)
T COG4618 165 ALAGAIILVVLALLNERATRK---PLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDR 241 (580)
T ss_pred HHHHHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 999998888888877655554 44556667778889999999999999999999999999888777777666555444
Q ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 000845 350 KGYYMVLFWSSPIL--IGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPEL 427 (1255)
Q Consensus 350 ~~~~~~~~~~~~~~--~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~ 427 (1255)
......+.-..-.+ ..+...|.|....+++|++.++..--+..-.-.|+-.......++..++.|.+|++++|.....
T Consensus 242 ~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~ 321 (580)
T COG4618 242 NGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPA 321 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 33333222222222 3345567777778999999999887778888889999999999999999999999999986433
Q ss_pred CCcchhcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC-----
Q 000845 428 QNSDMQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG----- 502 (1255)
Q Consensus 428 ~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G----- 502 (1255)
..... ..| . +++.+.++++++.-|.. .+|+|+|+||++++|+-++||||+|||||||.++|.|-.+|.+|
T Consensus 322 ~~~~m-~LP--~-P~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLD 396 (580)
T COG4618 322 AAERM-PLP--A-PQGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLD 396 (580)
T ss_pred ccCCC-CCC--C-CCceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEec
Confidence 22221 122 2 66789999999976554 47999999999999999999999999999999999999999998
Q ss_pred --------------------------------------------------------cccCCCCCCCccccccCCCcCChH
Q 000845 503 --------------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGG 526 (1255)
Q Consensus 503 --------------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGG 526 (1255)
+=|..||+||+|.|||.|.+||||
T Consensus 397 ga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgG 476 (580)
T COG4618 397 GADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGG 476 (580)
T ss_pred chhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCch
Confidence 114579999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChh
Q 000845 527 QKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYD 606 (1255)
Q Consensus 527 QkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~ 606 (1255)
|||||+||||+|.||.+++||||-|.||..-+..+.+.+..-..+|.|+|+||||++.+..+|+|++|++|++...|+-+
T Consensus 477 QRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~ 556 (580)
T COG4618 477 QRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPRE 556 (580)
T ss_pred HHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHH
Confidence 99999999999999999999999999999998888644333345799999999999999999999999999999999988
Q ss_pred HHhh
Q 000845 607 HLLV 610 (1255)
Q Consensus 607 el~~ 610 (1255)
|.++
T Consensus 557 eVLa 560 (580)
T COG4618 557 EVLA 560 (580)
T ss_pred HHHH
Confidence 8764
No 101
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-50 Score=457.20 Aligned_cols=233 Identities=22% Similarity=0.348 Sum_probs=205.6
Q ss_pred CCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCC
Q 000845 996 PDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDIT 1070 (1255)
Q Consensus 996 ~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~ 1070 (1255)
..||..+.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.|||+|+.
T Consensus 73 ~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~ 152 (329)
T PRK14257 73 EDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTR 152 (329)
T ss_pred CCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 4699999999999999997555679999999999999999999999999999999999997 57999999999997
Q ss_pred --CCChHHhhcccEEEccCCccCCCchhhhcccC---CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCC
Q 000845 1071 --TIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPL---SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1071 --~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~---~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
.++...+|++++||||+|.+|++|+++||++. ...++++.|+. ....+++.++++ .++++.+++.|.
T Consensus 153 ~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~-~~~~~l~~~~L~-------~~l~~~~~~~~~ 224 (329)
T PRK14257 153 SKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEK-IVEKSLKSAALW-------DEVKDDLDKAGN 224 (329)
T ss_pred ccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHH-HHHHHHHHcCCc-------chhhhhhhCCcc
Confidence 45667899999999999999999999999832 23455555430 011256666653 346678899999
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1224 (1255)
+||||||||+|||||++++|+|||||||||+||+++.+.+++.|++.++++|+|+|||+++++.+ ||||+||++|+|+|
T Consensus 225 ~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e 304 (329)
T PRK14257 225 ALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEE 304 (329)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999889999999999999988 99999999999999
Q ss_pred EcChhHHhhcCC
Q 000845 1225 YDEPKKLLRRQD 1236 (1255)
Q Consensus 1225 ~G~~~eLl~~~~ 1236 (1255)
.|+|+++..++.
T Consensus 305 ~g~~~~l~~~~~ 316 (329)
T PRK14257 305 AGETKTIFIHPK 316 (329)
T ss_pred eCCHHHHhcCCC
Confidence 999999988755
No 102
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-49 Score=397.14 Aligned_cols=226 Identities=27% Similarity=0.430 Sum_probs=196.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCC-CCChHHhhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDIT-TIGLYDLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~-~i~~~~lR~~i 1081 (1255)
-|+++||+.+|.. ..||+|||++|++||.++||||||||||||+++|.++.+|++|+|.|||.++. ..+...+|+++
T Consensus 2 mi~i~~l~K~fg~--~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGD--KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCC--eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 4899999999963 46999999999999999999999999999999999999999999999998773 33788899999
Q ss_pred EEEccCCccCCC-chhhhcccCC----CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLS----QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~----~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
|+|+|+..||+- |+-||+.... ..+.+|..+ ...+.|+++||.+..+..|. +||||||||+|
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~--~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVA 146 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEARE--KALELLEKVGLADKADAYPA-----------QLSGGQQQRVA 146 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHH--HHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHH
Confidence 999999999976 9999997432 233333332 11337889999988887774 69999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|||||.-+|+|+++|||||+||||.-..+.++++++. .|.|+|+|||.+.+.++ +|||+.||+|+|+|.|+|+++..+
T Consensus 147 IARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 147 IARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred HHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 9999999999999999999999999999999998876 47899999999999988 899999999999999999999998
Q ss_pred CChH-HHHHH
Q 000845 1235 QDSL-FAQLV 1243 (1255)
Q Consensus 1235 ~~~~-f~~l~ 1243 (1255)
|... -++.+
T Consensus 227 p~~~R~~~FL 236 (240)
T COG1126 227 PKSERTRQFL 236 (240)
T ss_pred CCCHHHHHHH
Confidence 7643 34433
No 103
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-47 Score=418.91 Aligned_cols=413 Identities=20% Similarity=0.279 Sum_probs=316.2
Q ss_pred HHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHH
Q 000845 201 SSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWF-HQIWSTSLQLCIAVVVVYYSVGLAT-IATLIVMI 278 (1255)
Q Consensus 201 ~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~-~~~~~~pl~i~v~~~lL~~~lG~~~-l~g~~~~~ 278 (1255)
..+....|++.+.|+.....+..+|.+.--+..-...|....+++ ..+....+++++.+.++|+..||.. .+.++.++
T Consensus 15 r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t~vtv~ 94 (497)
T COG5265 15 RVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTTLVTVI 94 (497)
T ss_pred HHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHH
Confidence 345566777777777554444455655444444444455544432 2333456799999999999999844 44555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Q 000845 279 LTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSE----EYGWLKVLQLQKGYYM 354 (1255)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~----El~~~~~~~~~~~~~~ 354 (1255)
+...+...+..+....++..+++-.+.....-+.|-+-.+||.|+-|+.+..+..+..+. +++......++.....
T Consensus 95 lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln~gQ~ 174 (497)
T COG5265 95 LYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLNFGQT 174 (497)
T ss_pred HHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 555566666666666777766666666677889999999999999999998887664444 3332222222211111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCcchh
Q 000845 355 VLFWSSPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPE-LQNSDMQ 433 (1255)
Q Consensus 355 ~~~~~~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e-~~~~~~~ 433 (1255)
.++. ..+....+....-+..+.+|.+...-.-++...+..|++.+...+..+-++++.++++.+-+..+- ..+.+..
T Consensus 175 ~I~~--~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~pda 252 (497)
T COG5265 175 AIFS--TGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDAPDA 252 (497)
T ss_pred HHHH--HHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccCCCC
Confidence 1111 111222223333345688999999888889999999999999999999999999999999988653 2222111
Q ss_pred cccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC-----------
Q 000845 434 QVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG----------- 502 (1255)
Q Consensus 434 ~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G----------- 502 (1255)
.+-.....+.|.|++++|.|..+ +|+|+++||++|+|+.++|||++|+||||+++.|.+++++.+|
T Consensus 253 -~~L~~~~~g~v~F~~V~F~y~~~--r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~ 329 (497)
T COG5265 253 -PPLWPVRLGAVAFINVSFAYDPR--RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRD 329 (497)
T ss_pred -ccccccccceEEEEEEEeecccc--chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHH
Confidence 11110145679999999999765 5899999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHH
Q 000845 503 --------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQ 532 (1255)
Q Consensus 503 --------------------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIa 532 (1255)
..+..+|+|++|.|||+|-.||||+|||||
T Consensus 330 vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrva 409 (497)
T COG5265 330 VTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVA 409 (497)
T ss_pred hHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHHH
Confidence 247889999999999999999999999999
Q ss_pred HHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcc
Q 000845 533 LARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTS 612 (1255)
Q Consensus 533 LARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~ 612 (1255)
+||++.++|+|++|||+|||||.+|++.| +..++...+|+|.++++||++++-.||.|+||++|+|+|.|+|+||+..+
T Consensus 410 iar~ilk~p~il~~deatsaldt~te~~i-q~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll~~~ 488 (497)
T COG5265 410 IARTILKNPPILILDEATSALDTHTEQAI-QAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELLAAG 488 (497)
T ss_pred HHHHHhcCCCEEEEehhhhHhhhhHHHHH-HHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHHHcC
Confidence 99999999999999999999999999877 67778888999999999999999999999999999999999999999999
Q ss_pred hHHHHHH
Q 000845 613 QEFQDLV 619 (1255)
Q Consensus 613 ~~~~~l~ 619 (1255)
+.|.+++
T Consensus 489 g~ya~mw 495 (497)
T COG5265 489 GLYAEMW 495 (497)
T ss_pred ChHHHHh
Confidence 9888876
No 104
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=7.6e-47 Score=424.59 Aligned_cols=223 Identities=20% Similarity=0.352 Sum_probs=174.6
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeC-CCCChHHhh-
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDI-TTIGLYDLR- 1078 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di-~~i~~~~lR- 1078 (1255)
..-++++|++..-+.+ -+.+++|||++++||++||.|-.|.|-+-|+.+|.|+..+.+|+|.++|.|+ ...+....|
T Consensus 255 ~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~ 333 (501)
T COG3845 255 EVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERRR 333 (501)
T ss_pred CeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHHh
Confidence 4468999999875433 3589999999999999999999999999999999999999999999999997 677777765
Q ss_pred cccEEEccCCc----cCCCchhhhcccCCCCChHHHHhc-cCchhHHHhccHHHHHHhh---hcCccchhcCCCCCCChh
Q 000845 1079 SNLGIIPQDPT----LFSGSVRYNLDPLSQFTDQEIWEV-TIPSQVLEKCQLREVIQEK---KEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1079 ~~i~~vpQdp~----Lf~gTIr~Nl~~~~~~sd~ei~~~-~~~~~al~~~~l~~~i~~l---p~gldt~v~e~G~~LSgG 1150 (1255)
..++|||.|.+ ..+-|+.||+-+.....+ ....- .....++++ ...+.++++ +.+.++++ .+||||
T Consensus 334 ~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~-~~~~~g~l~~~~i~~-~a~~li~~fdVr~~~~~~~a----~~LSGG 407 (501)
T COG3845 334 LGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKK-PFSRGGFLDRRAIRK-FARELIEEFDVRAPSPDAPA----RSLSGG 407 (501)
T ss_pred cCCccCChhhccCccccCccHHHHhhhhhcccc-ccccccccCHHHHHH-HHHHHHHHcCccCCCCCcch----hhcCCc
Confidence 46999999985 556799999864321111 00000 000001111 112222221 23444444 479999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcCh
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1228 (1255)
++||+-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. .|+.|++||-+|+.+.. ||||.||.+|+|+....+
T Consensus 408 NqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~~ 487 (501)
T COG3845 408 NQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVPP 487 (501)
T ss_pred ceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceeccccc
Confidence 9999999999999999999999999999999999999888765 58899999999999977 999999999999998887
Q ss_pred hH
Q 000845 1229 KK 1230 (1255)
Q Consensus 1229 ~e 1230 (1255)
++
T Consensus 488 ~~ 489 (501)
T COG3845 488 EE 489 (501)
T ss_pred cc
Confidence 76
No 105
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=4.7e-48 Score=434.30 Aligned_cols=194 Identities=20% Similarity=0.310 Sum_probs=158.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|.|+||+|.|+++ +..+++++|-|.++++||+|||||+|||||++++.|.+.|+.|.|.-.- ..+++
T Consensus 389 vi~~~nv~F~y~~~-~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~-----------H~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDN-PMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHS-----------HNKLP 456 (614)
T ss_pred eEEEeccccCCCCc-chhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccc-----------cccch
Confidence 59999999999755 4799999999999999999999999999999999999999999886432 23344
Q ss_pred EEccC---CccCCCchhhhccc-CCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1083 IIPQD---PTLFSGSVRYNLDP-LSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1083 ~vpQd---p~Lf~gTIr~Nl~~-~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
+..|. -..++-|.-+++.+ +.+..+.+.|. ..+.++||....+..|. .+||+|||.|+++|
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r-----~ilgrfgLtgd~q~~p~----------~~LS~Gqr~rVlFa 521 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMR-----SILGRFGLTGDAQVVPM----------SQLSDGQRRRVLFA 521 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHH-----HHHHHhCCCccccccch----------hhcccccchhHHHH
Confidence 44453 34566677777764 23233334443 28999998755444333 47999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEE
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1225 (1255)
|+++++|.||+|||||++||.+|-..+.++|.++ ..+||+|+|+...|.. +++|++.++|.+...
T Consensus 522 ~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 522 RLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred HHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 9999999999999999999999999999999864 4589999999999988 899999999998764
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-48 Score=407.79 Aligned_cols=230 Identities=25% Similarity=0.411 Sum_probs=196.7
Q ss_pred EEEEEEEEEeCCC---CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh---HHh
Q 000845 1004 VEIYDLQIRYRPN---APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL---YDL 1077 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~---~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~---~~l 1077 (1255)
|++++|++.|+.. ...+|+||||+|++||+.||+|+||||||||++++-++-+|++|+|.+||.|+..++. ..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999752 3569999999999999999999999999999999999999999999999999887775 456
Q ss_pred hcccEEEccCCccCC-Cchhhhccc-CC--CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1078 RSNLGIIPQDPTLFS-GSVRYNLDP-LS--QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1078 R~~i~~vpQdp~Lf~-gTIr~Nl~~-~~--~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
|++||+|+|++.|++ -|+.+|+.+ .. ..+.+|+.+ ...+.|+.+||.|....-| .+|||||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~--RV~elLelVgL~dk~~~yP-----------~qLSGGQKQ 148 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQ--RVAELLELVGLSDKADRYP-----------AQLSGGQKQ 148 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHH--HHHHHHHHcCChhhhccCc-----------hhcCcchhh
Confidence 789999999999998 699999973 21 345566543 1223677777776655444 589999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|++|||||..+|+||+.|||||+|||+|.+.|.+.|++.- -|-|+++|||.++.+++ ||||.||++|+|+|.|+-.+
T Consensus 149 RVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~ 228 (339)
T COG1135 149 RVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSE 228 (339)
T ss_pred HHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHH
Confidence 9999999999999999999999999999999999988653 37899999999999988 99999999999999999999
Q ss_pred HhhcCCh-HHHHHHHHH
Q 000845 1231 LLRRQDS-LFAQLVKEY 1246 (1255)
Q Consensus 1231 Ll~~~~~-~f~~l~~~~ 1246 (1255)
+..+|.. .=++++.+.
T Consensus 229 vF~~Pk~~~t~~fi~~~ 245 (339)
T COG1135 229 VFANPKHAITQEFIGET 245 (339)
T ss_pred hhcCcchHHHHHHHHhh
Confidence 9998744 445555544
No 107
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2.1e-43 Score=441.94 Aligned_cols=458 Identities=14% Similarity=0.102 Sum_probs=327.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 128 SILFSGFFALIKVISISAGPLFLKAFISAAEGEIIF-KY-EIYSLAISLFLVKCVESLAGRHWFFQSRLTGLKIRSSLCA 205 (1255)
Q Consensus 128 ~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~ 205 (1255)
.++...++.++.+++....|.+.+.+++.+...+.. .. ..+.+++.+++. +++.....|...++..++|..++.
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~----~~~~~~~~~~~~~~~~~~r~~l~~ 172 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPA----SFINSAIKYLLKELKLRFRVRLTR 172 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466677778888899999999999999987654321 11 112222222333 333334445566667777777777
Q ss_pred HHHHHHhcCCh----hhhccCChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHH
Q 000845 206 AISSKQLRLSN----AAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGL-ATIATLIVMIL 279 (1255)
Q Consensus 206 ~iy~K~l~l~~----~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~lL~~~lG~-~~l~g~~~~~~ 279 (1255)
.++++.++-.. ...++ .+|++.+.+++|++.+.+.+. .+..+...++.++++++.++..++| .+++.++.+++
T Consensus 173 ~l~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l 251 (659)
T TIGR00954 173 YLYSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFA 251 (659)
T ss_pred HHHHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 77777765321 11222 579999999999999988654 4556667777788788888877888 44555566677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000845 280 TVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKGYYMVLFWS 359 (1255)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~ 359 (1255)
...+..++.+.+.+..++..+..++-.+..+|.++++++||+|+-|+.+.++..+.-++-.+...+.....+....+...
T Consensus 252 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 331 (659)
T TIGR00954 252 TGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNI 331 (659)
T ss_pred HHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 77778888888999999999999999999999999999999999999988887765444444444444333333222211
Q ss_pred H----HHHHHHHHHHHHHHh-C----CCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 000845 360 S----PILIGAATLLTCYFL-G----IPLNPSNVFTF----LATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPE 426 (1255)
Q Consensus 360 ~----~~~~~~~~f~~~~~~-~----~~L~~~~vft~----l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e 426 (1255)
. ...+..+..+..++. . +.+|.+..+.. ..++..+..|+..+...+..+.++.++.+||.++++.++
T Consensus 332 i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~ 411 (659)
T TIGR00954 332 VAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLD 411 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 112222222232222 1 56887765442 334667789999999999999999999999999997522
Q ss_pred C-CC-----cchhc-------------c---cccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCC
Q 000845 427 L-QN-----SDMQQ-------------V---CSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGA 484 (1255)
Q Consensus 427 ~-~~-----~~~~~-------------~---~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~Gs 484 (1255)
. +. ..... . .......+.|+++|++|+|+.+ +++|+|+||++++||.++|+|||||
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~isl~i~~Ge~~~IvG~nGs 489 (659)
T TIGR00954 412 DVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESLSFEVPSGNHLLICGPNGC 489 (659)
T ss_pred HHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--CeeeecceEEECCCCEEEEECCCCC
Confidence 1 00 00000 0 0000123469999999999743 3799999999999999999999999
Q ss_pred CHHHHHHHHhccCCCCCCc--------------c-----------c-------------------------------CCC
Q 000845 485 GKSTLLAAILGELPRLQGM--------------D-----------L-------------------------------KML 508 (1255)
Q Consensus 485 GKSTLL~~llGe~~~~~G~--------------D-----------i-------------------------------~~l 508 (1255)
|||||+++|+|++++.+|. + + ..-
T Consensus 490 GKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~ 569 (659)
T TIGR00954 490 GKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER 569 (659)
T ss_pred CHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh
Confidence 9999999999999988871 0 0 001
Q ss_pred CCCCccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccC
Q 000845 509 PFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAF 588 (1255)
Q Consensus 509 p~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~a 588 (1255)
|.|.+|..+ .+.+||||||||++||||++++|+++|||||||+||+.+++.+.+ .+.. .++|+|+|||+++.++.|
T Consensus 570 ~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~-~l~~--~~~tvI~isH~~~~~~~~ 645 (659)
T TIGR00954 570 EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYR-LCRE--FGITLFSVSHRKSLWKYH 645 (659)
T ss_pred cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHH-HHHH--cCCEEEEEeCchHHHHhC
Confidence 334445544 457999999999999999999999999999999999999888765 4433 389999999999999999
Q ss_pred CEEEEEeC
Q 000845 589 DSILLISG 596 (1255)
Q Consensus 589 D~Iivl~~ 596 (1255)
|+|++|++
T Consensus 646 d~il~l~~ 653 (659)
T TIGR00954 646 EYLLYMDG 653 (659)
T ss_pred CEEEEEeC
Confidence 99999974
No 108
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.3e-45 Score=412.05 Aligned_cols=240 Identities=48% Similarity=0.811 Sum_probs=221.7
Q ss_pred CCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhc
Q 000845 1000 PTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRS 1079 (1255)
Q Consensus 1000 ~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~ 1079 (1255)
..|.|+++|++++|+.....+|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 35789999999999654356999999999999999999999999999999999999999999999999999999889999
Q ss_pred ccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1080 NLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1080 ~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
.++|+||+|.+|++|+++|+++.....++++++ +++.+++.+.+..+|.|+++.+++.+.+||+|||||++|||
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~------~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~lar 169 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWE------ALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLAR 169 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHH------HHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHH
Confidence 999999999999999999998654344555665 88889999999999999999999999999999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHH
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLF 1239 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f 1239 (1255)
|++++|++|||||||++||+++.+.+.+.+++..+++|+|++||+++.+..||||++|++|++++.|+++++.+.+++.|
T Consensus 170 al~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~ 249 (257)
T cd03288 170 AFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVF 249 (257)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHH
Confidence 99999999999999999999999999999998777899999999999998999999999999999999999998777888
Q ss_pred HHHHHH
Q 000845 1240 AQLVKE 1245 (1255)
Q Consensus 1240 ~~l~~~ 1245 (1255)
+.++..
T Consensus 250 ~~~~~~ 255 (257)
T cd03288 250 ASLVRT 255 (257)
T ss_pred HHHHhc
Confidence 887753
No 109
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-46 Score=376.90 Aligned_cols=224 Identities=24% Similarity=0.407 Sum_probs=197.3
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCC-----CEEEEcCEeCCC--CCh
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTG-----GKIIIDGLDITT--IGL 1074 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~-----G~I~idG~di~~--i~~ 1074 (1255)
..++++|+++.|. ...+|+|||++|++++.+|++|||||||||++++|-|+.+..+ |+|.+||.||-+ ++.
T Consensus 6 ~~~~~~~l~~yYg--~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYG--DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEEC--chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 4689999999996 3469999999999999999999999999999999999999876 999999999965 678
Q ss_pred HHhhcccEEEccCCccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1075 YDLRSNLGIIPQDPTLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1075 ~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
..||+++|+|+|.|.-|+.||+||+.+.. ...+.++.+ ..+++|+++.||+-+... | .+.+..|||||
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~lde--iVe~sLk~AaLWdEVKDr---L----~~sa~~LSGGQ 154 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDE--IVESSLKKAALWDEVKDR---L----HKSALGLSGGQ 154 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHH--HHHHHHHHhHhHHHhHHH---h----hCCccCCChhH
Confidence 89999999999999999999999997542 122222222 123599999999988643 3 34567899999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
+|||||||||.-+|+||+||||||+|||.+...|++.|.++.++-|+++|||.+.-... +|+...+-.|+++|+|..++
T Consensus 155 QQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 155 QQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 99999999999999999999999999999999999999999889999999999998766 89999999999999999999
Q ss_pred HhhcCC
Q 000845 1231 LLRRQD 1236 (1255)
Q Consensus 1231 Ll~~~~ 1236 (1255)
+..+|.
T Consensus 235 iF~~P~ 240 (253)
T COG1117 235 IFTNPK 240 (253)
T ss_pred hhcCcc
Confidence 988764
No 110
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-46 Score=385.64 Aligned_cols=222 Identities=29% Similarity=0.482 Sum_probs=195.4
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+|+|||++|. ...+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++|||
T Consensus 2 I~~~nvsk~y~--~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYG--NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcC--CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 79999999996 3569999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHH--HHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLR--EVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~--~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
|-|.--||+- ||.+||..-. ..+.+++.+ ...+.++.++|. ++....| ..|||||+||+.+
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~--r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv 146 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKK--RADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGV 146 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHH--HHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHH
Confidence 9999999976 9999996322 345555543 112367777774 3555555 4699999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||..+|+|++||||.++|||-|...+|+-+.+..+ ++|+|+|||+++.... +|||.||++|+|+.+|+|++++++
T Consensus 147 ~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~ 226 (309)
T COG1125 147 ARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN 226 (309)
T ss_pred HHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998876543 7899999999998765 999999999999999999999999
Q ss_pred CChHHH
Q 000845 1235 QDSLFA 1240 (1255)
Q Consensus 1235 ~~~~f~ 1240 (1255)
|...|-
T Consensus 227 Pan~FV 232 (309)
T COG1125 227 PANDFV 232 (309)
T ss_pred ccHHHH
Confidence 877664
No 111
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=8.5e-45 Score=401.53 Aligned_cols=234 Identities=31% Similarity=0.570 Sum_probs=213.5
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999996544569999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCCccCCCchhhhcccCCC-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHc
Q 000845 1084 IPQDPTLFSGSVRYNLDPLSQ-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVL 1162 (1255)
Q Consensus 1084 vpQdp~Lf~gTIr~Nl~~~~~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL 1162 (1255)
+||++.+|+.|+++|+..... .+.+++.+ +++..++.+++..+|.|+++.....+.+||||||||++||||++
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~------~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~ 154 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIE------AAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALI 154 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHH------HHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999985432 34455554 67788899999999999999998889999999999999999999
Q ss_pred cCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHH
Q 000845 1163 RRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQL 1242 (1255)
Q Consensus 1163 ~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l 1242 (1255)
++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++++ .+.|+++
T Consensus 155 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 233 (237)
T cd03252 155 HNPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYL 233 (237)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHH
Confidence 999999999999999999999999999988778999999999999988999999999999999999999876 6778776
Q ss_pred HH
Q 000845 1243 VK 1244 (1255)
Q Consensus 1243 ~~ 1244 (1255)
++
T Consensus 234 ~~ 235 (237)
T cd03252 234 YQ 235 (237)
T ss_pred Hh
Confidence 64
No 112
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.4e-44 Score=393.69 Aligned_cols=221 Identities=52% Similarity=0.957 Sum_probs=207.2
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
|.++++|++++|+.+..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.+
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 46899999999975445699999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHH
Q 000845 1082 GIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVV 1161 (1255)
Q Consensus 1082 ~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAl 1161 (1255)
+|+||+|.+|++|+++|++++.....+++.+ +++..++.+++..+|.|+++..++.+.+||+|||||++||||+
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~------~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral 154 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQ------ALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARAL 154 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHH------HHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHH
Confidence 9999999999999999998766666677776 8899999999999999999999999999999999999999999
Q ss_pred ccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcCh
Q 000845 1162 LRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1162 L~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~ 1228 (1255)
+++|+++||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|++
T Consensus 155 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 155 LRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999999999988778999999999999989999999999999998863
No 113
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-43 Score=389.58 Aligned_cols=232 Identities=34% Similarity=0.575 Sum_probs=209.8
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+....++++|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999996443369999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCCccCCCchhhhcccCCC-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHc
Q 000845 1084 IPQDPTLFSGSVRYNLDPLSQ-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVL 1162 (1255)
Q Consensus 1084 vpQdp~Lf~gTIr~Nl~~~~~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL 1162 (1255)
+||+|.+|+.|+++|+..... .+.+++.+ .++..++.+++..+|.|+++..+....+||+|||||++|||||+
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~ 154 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEE------AARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALL 154 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHH------HHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999986432 34444444 67788899999999999999998889999999999999999999
Q ss_pred cCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHH
Q 000845 1163 RRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQL 1242 (1255)
Q Consensus 1163 ~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l 1242 (1255)
++|+++||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|+++++..+ .+.|+.+
T Consensus 155 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 233 (234)
T cd03251 155 KDPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAKL 233 (234)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhhh
Confidence 999999999999999999999999999988788999999999999988999999999999999999999875 5555543
No 114
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-44 Score=367.26 Aligned_cols=226 Identities=27% Similarity=0.438 Sum_probs=188.1
Q ss_pred eEEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC-hHHhhc
Q 000845 1003 KVEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG-LYDLRS 1079 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~-~~~lR~ 1079 (1255)
.++++|+++.|+... .++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.++.... ....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999996432 25999999999999999999999999999999999999999999999998775543 335788
Q ss_pred ccEEEccCCcc-CC--Cchhhhcc-cCCC----CChHHHHhccCchhHHHhccHHH-HHHhhhcCccchhcCCCCCCChh
Q 000845 1080 NLGIIPQDPTL-FS--GSVRYNLD-PLSQ----FTDQEIWEVTIPSQVLEKCQLRE-VIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1080 ~i~~vpQdp~L-f~--gTIr~Nl~-~~~~----~sd~ei~~~~~~~~al~~~~l~~-~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
.+.+|+|||.- ++ -||++-|. |... -..+++++ +|+.+||.+ +....| ..||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~------~L~~VgL~~~~l~R~P-----------~eLSGG 145 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAE------LLDQVGLPPSFLDRRP-----------HELSGG 145 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHH------HHHHcCCCHHHHhcCc-----------hhcChh
Confidence 89999999962 21 25555553 2221 22344666 899999864 444445 469999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCc--EEEEeccCchhhhh-cCEEEEEeCCEEEEEcC
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANC--TVITVAHRIATVMD-CNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~--TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1227 (1255)
||||+||||||.-+|++||||||||+||.-..+.|.+.+.+..+++ |.|+|||+++.+.. ||||+||++|+++|.++
T Consensus 146 Q~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~ 225 (252)
T COG1124 146 QRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGP 225 (252)
T ss_pred HHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeec
Confidence 9999999999999999999999999999999999999998876654 99999999999988 99999999999999999
Q ss_pred hhHHhhcCChHHHHHHHH
Q 000845 1228 PKKLLRRQDSLFAQLVKE 1245 (1255)
Q Consensus 1228 ~~eLl~~~~~~f~~l~~~ 1245 (1255)
-.++...+...|.+.+-+
T Consensus 226 ~~~l~~~~~h~ytr~Ll~ 243 (252)
T COG1124 226 TEELLSHPSHPYTRELLE 243 (252)
T ss_pred hhhhhcCCccHHHHHHHH
Confidence 999998766667655443
No 115
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.6e-43 Score=361.34 Aligned_cols=229 Identities=27% Similarity=0.457 Sum_probs=198.6
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChH---Hhh
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLY---DLR 1078 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~---~lR 1078 (1255)
..|++++|+++|. ...|++||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.|+.+++.+ .+|
T Consensus 7 ~~I~vr~v~~~fG--~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 7 PLIEVRGVTKSFG--DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred ceEEEeeeeeecC--CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 4699999999994 45699999999999999999999999999999999999999999999999999988865 469
Q ss_pred cccEEEccCCccCCC-chhhhccc-CC---CCChHHHHhccCchhHHHhccHHHH-HHhhhcCccchhcCCCCCCChhHH
Q 000845 1079 SNLGIIPQDPTLFSG-SVRYNLDP-LS---QFTDQEIWEVTIPSQVLEKCQLREV-IQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1079 ~~i~~vpQdp~Lf~g-TIr~Nl~~-~~---~~sd~ei~~~~~~~~al~~~~l~~~-i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
+++|+++|...||+. ||+||+.+ .. +.+++++.+. ...-|+.|||... .+..| +.||||.+
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~l--v~~KL~~VGL~~~~~~~~P-----------sELSGGM~ 151 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIREL--VLMKLELVGLRGAAADLYP-----------SELSGGMR 151 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHH--HHHHHHhcCCChhhhhhCc-----------hhhcchHH
Confidence 999999999999987 99999974 33 3455555541 1124667777766 33344 57999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChh
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPK 1229 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1229 (1255)
.|.+||||+.-+|+|+++|||||+|||.+...+-+.|++.. -+.|+++|||+++++.. ||||+++.+|+|+-.|+++
T Consensus 152 KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~ 231 (263)
T COG1127 152 KRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPE 231 (263)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHH
Confidence 99999999999999999999999999999999998888764 37899999999999987 8999999999999999999
Q ss_pred HHhhcCChHHHHHHHH
Q 000845 1230 KLLRRQDSLFAQLVKE 1245 (1255)
Q Consensus 1230 eLl~~~~~~f~~l~~~ 1245 (1255)
||.+.++-..+++++.
T Consensus 232 el~~sd~P~v~qf~~G 247 (263)
T COG1127 232 ELLASDDPWVRQFFNG 247 (263)
T ss_pred HHHhCCCHHHHHHhcC
Confidence 9999888777776653
No 116
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.3e-43 Score=403.86 Aligned_cols=228 Identities=25% Similarity=0.417 Sum_probs=191.8
Q ss_pred EEEEEEEEEeCCC--CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH---hh
Q 000845 1004 VEIYDLQIRYRPN--APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD---LR 1078 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~--~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~---lR 1078 (1255)
|+++||+++|+.+ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cccEEEccCCccCC-CchhhhcccC---CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1079 SNLGIIPQDPTLFS-GSVRYNLDPL---SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1079 ~~i~~vpQdp~Lf~-gTIr~Nl~~~---~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
++|+||||++.+|. .|+++|+... ...+.+++.+ ...++++.+++.+..+..| ..||||||||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~--~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQR 148 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR--KVTELLALVGLGDKHDSYP-----------SNLSGGQKQR 148 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCCchhhhCCh-----------hhCCHHHHHH
Confidence 89999999999996 6999999632 1223333221 0112777787766544333 5799999999
Q ss_pred HHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1155 IGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1155 l~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
++|||||+.+|+|||||||||+||+++.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|+|.|+++++
T Consensus 149 V~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v 228 (343)
T TIGR02314 149 VAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEI 228 (343)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999999999999999999998753 7899999999999976 999999999999999999999
Q ss_pred hhcCChHH-HHHHH
Q 000845 1232 LRRQDSLF-AQLVK 1244 (1255)
Q Consensus 1232 l~~~~~~f-~~l~~ 1244 (1255)
+.++...+ +.++.
T Consensus 229 ~~~p~~~~~~~~~~ 242 (343)
T TIGR02314 229 FSHPKTPLAQKFIR 242 (343)
T ss_pred HcCCCcHHHHHHHh
Confidence 87664433 44443
No 117
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-43 Score=386.39 Aligned_cols=233 Identities=33% Similarity=0.619 Sum_probs=212.4
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999633 459999999999999999999999999999999999999999999999999998888889999999
Q ss_pred EccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHc
Q 000845 1084 IPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVL 1162 (1255)
Q Consensus 1084 vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL 1162 (1255)
+||+|.+|++|+++|+.... ..+++++.+ +++.+++.+.+..+|.|+++.+.....+||||||||++|||||+
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~------~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~ 153 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIE------AAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAIL 153 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHH------HHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 99999999999999997543 345556655 78888999999999999999999889999999999999999999
Q ss_pred cCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHHH
Q 000845 1163 RRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQL 1242 (1255)
Q Consensus 1163 ~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~l 1242 (1255)
++|++|||||||++||+++.+.+.+.|++..++.|+|+++|+++.+..||++++|++|++++.|+++++..+ .+.|+.+
T Consensus 154 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~ 232 (236)
T cd03253 154 KNPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEM 232 (236)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHH
Confidence 999999999999999999999999999887668899999999999988999999999999999999999875 5677666
Q ss_pred HH
Q 000845 1243 VK 1244 (1255)
Q Consensus 1243 ~~ 1244 (1255)
+.
T Consensus 233 ~~ 234 (236)
T cd03253 233 WK 234 (236)
T ss_pred Hh
Confidence 54
No 118
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.8e-43 Score=378.49 Aligned_cols=214 Identities=28% Similarity=0.447 Sum_probs=187.8
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.++++|++|+|+ ..++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.|+.+++..++-++++
T Consensus 2 ~L~~~~ls~~y~--~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYG--GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEEC--CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 478999999996 457999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCc-cCCCchhhhcccC--------CCCC--hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1083 IIPQDPT-LFSGSVRYNLDPL--------SQFT--DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1083 ~vpQdp~-Lf~gTIr~Nl~~~--------~~~s--d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
||||++. -|.-|++|=+..+ ...+ |+++.+ +||+.+++.++..+. + ..|||||
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~-----~aL~~~~~~~la~r~-------~----~~LSGGe 143 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVE-----EALELLGLEHLADRP-------V----DELSGGE 143 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHH-----HHHHHhCcHHHhcCc-------c----cccChhH
Confidence 9999975 4556898877422 2223 333322 389999998886532 2 3699999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhh-hhcCEEEEEeCCEEEEEcCh
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATV-MDCNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti-~~~DrI~vl~~G~ive~G~~ 1228 (1255)
|||+.|||||.++|+||+||||||+||....-.+++.+++.. ++.|+|+|.|+++.. +.||++++|++|+|+..|+|
T Consensus 144 rQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p 223 (258)
T COG1120 144 RQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTP 223 (258)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCc
Confidence 999999999999999999999999999999999999999876 369999999999876 45999999999999999999
Q ss_pred hHHhhc
Q 000845 1229 KKLLRR 1234 (1255)
Q Consensus 1229 ~eLl~~ 1234 (1255)
+|.+..
T Consensus 224 ~evlT~ 229 (258)
T COG1120 224 EEVLTE 229 (258)
T ss_pred chhcCH
Confidence 998864
No 119
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-43 Score=384.75 Aligned_cols=226 Identities=35% Similarity=0.626 Sum_probs=207.5
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
|.|+++|++++|+. ..++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 1 ~~l~~~~l~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDE-KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCC-CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 46899999999963 23599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEccCCccCCCchhhhcccCCC-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1082 GIIPQDPTLFSGSVRYNLDPLSQ-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1082 ~~vpQdp~Lf~gTIr~Nl~~~~~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
+|+||+|.+|++|+++|+..... ..++++.+ +++.+++.++++.+|.|+++.++....+||||||||++||||
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~a 153 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIE------AAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARA 153 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHH------HHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHH
Confidence 99999999999999999986432 34455555 788899999999999999999998889999999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.++
T Consensus 154 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 154 MLRDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999999999987678999999999999988999999999999999999888764
No 120
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.8e-42 Score=387.43 Aligned_cols=192 Identities=23% Similarity=0.331 Sum_probs=161.3
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcc
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSN 1080 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~ 1080 (1255)
...+++.+|+|.|.|+.++.++++++.+..-+++++||++|+||||+++++.+-..|..|.+.+.+ |.+
T Consensus 360 ~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 347999999999998877899999999999999999999999999999999999999999888765 789
Q ss_pred cEEEccCCccCCCchhhhc---c----cCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1081 LGIIPQDPTLFSGSVRYNL---D----PLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1081 i~~vpQdp~Lf~gTIr~Nl---~----~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
|+|-.|.-+=| ..-|. | .+.-.+++|+.. .|...|+...+...+ + ..||||||-
T Consensus 429 i~~f~Qhhvd~---l~~~v~~vd~~~~~~pG~~~ee~r~------hl~~~Gl~g~la~~s------i----~~LSGGQKs 489 (582)
T KOG0062|consen 429 IKYFAQHHVDF---LDKNVNAVDFMEKSFPGKTEEEIRR------HLGSFGLSGELALQS------I----ASLSGGQKS 489 (582)
T ss_pred ecchhHhhhhH---HHHHhHHHHHHHHhCCCCCHHHHHH------HHHhcCCCchhhhcc------c----cccCCcchh
Confidence 99999976533 22222 1 111237888876 777776655443322 1 469999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEE
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1224 (1255)
|+++|-+...+|.+|||||||++||.++-..+-++|+.. . .-||+|||+.+.|.. |+.++|.++|+|.-
T Consensus 490 rvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F-~-GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 490 RVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF-N-GGVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred HHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc-C-CcEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 999999999999999999999999999999999999863 3 369999999999987 99999999999986
No 121
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.6e-43 Score=377.86 Aligned_cols=207 Identities=55% Similarity=0.947 Sum_probs=186.5
Q ss_pred CCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh
Q 000845 998 WPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL 1077 (1255)
Q Consensus 998 ~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l 1077 (1255)
||..+.++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 88889999999999996533469999999999999999999999999999999999999999999999999988888888
Q ss_pred hcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1078 RSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1078 R~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
|+.|+|+||+|.+|++|+++|+..+...+++++.+ +++ +......|||||+||++|
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~------~l~------------------~~~~~~~LS~G~~qrv~l 136 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYG------ALR------------------VSEGGLNLSQGQRQLLCL 136 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHH------Hhh------------------ccCCCCcCCHHHHHHHHH
Confidence 99999999999999999999997654444444433 332 234567899999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcCh
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~ 1228 (1255)
|||++++|+++||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+|
T Consensus 137 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 137 ARALLKRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred HHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999999999988778999999999999988999999999999998875
No 122
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.4e-42 Score=384.16 Aligned_cols=233 Identities=33% Similarity=0.627 Sum_probs=208.9
Q ss_pred EEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1004 VEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
++++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4789999999643 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHH
Q 000845 1083 IIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVV 1161 (1255)
Q Consensus 1083 ~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAl 1161 (1255)
|+||+|.+|+.|+++|+.... ....+++.+ .++..++.+++..+|.|+++.......+||||||||++||||+
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al 154 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEE------AAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARAL 154 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHH------HHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHH
Confidence 999999999999999997542 234455554 6778889999999999999999888899999999999999999
Q ss_pred ccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHHHH
Q 000845 1162 LRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQ 1241 (1255)
Q Consensus 1162 L~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~ 1241 (1255)
+.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++... .+..+.
T Consensus 155 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~ 233 (238)
T cd03249 155 LRNPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAK 233 (238)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHH
Confidence 9999999999999999999999999999987678999999999999988999999999999999999998875 445554
Q ss_pred HH
Q 000845 1242 LV 1243 (1255)
Q Consensus 1242 l~ 1243 (1255)
++
T Consensus 234 ~~ 235 (238)
T cd03249 234 LV 235 (238)
T ss_pred Hh
Confidence 44
No 123
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-43 Score=389.14 Aligned_cols=221 Identities=26% Similarity=0.440 Sum_probs=195.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++||+.+|.... +++|+||+|+.||.++|+|||||||||++++|.|+.+|++|+|.|||.|++++++++ ++|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999996432 999999999999999999999999999999999999999999999999999999886 8999
Q ss_pred EEccCCccCCC-chhhhcccCCC---CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLSQ---FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~~---~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
+|+|+..||+- ||++||.+.-+ .+.+|+.+ ...++++..++.+.++..|. .||||||||+|||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~--rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAla 145 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDK--RVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALA 145 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHH--HHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHH
Confidence 99999999987 99999985322 23344332 11238888888888887764 6899999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcC
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
|||+++|++++||||.|+||+.....+...|++..+ +.|+|.|||+...++. +|||+||++|+|.+.|+|.|+..+|
T Consensus 146 RAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 146 RALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 999999999999999999999999998888877543 6799999999999877 9999999999999999999999998
Q ss_pred ChHHH
Q 000845 1236 DSLFA 1240 (1255)
Q Consensus 1236 ~~~f~ 1240 (1255)
...|-
T Consensus 226 ~n~fV 230 (338)
T COG3839 226 ANLFV 230 (338)
T ss_pred cchhh
Confidence 87664
No 124
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.8e-43 Score=346.64 Aligned_cols=211 Identities=24% Similarity=0.369 Sum_probs=187.0
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH---hhcc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD---LRSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~---lR~~ 1080 (1255)
|+|+||+.+|+.+ +++|+||||+|++||.+-++||||||||||+++|++...|++|+|.++|.|++++..++ ||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7999999999866 77999999999999999999999999999999999999999999999999999888765 8999
Q ss_pred cEEEccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1081 LGIIPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1081 i~~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
||+|+||--|+.. |+.||+.+-- ....+++.+ ...++|+.+||.+-...+|. .|||||+||+|
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~--rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRva 147 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRR--RVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVA 147 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHH--HHHHHHHHhccchhhhcCcc-----------ccCchHHHHHH
Confidence 9999999988765 9999997421 233444432 12348999999999988885 68999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhc-CEEEEEeCCEEEEEcCh
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDC-NMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~-DrI~vl~~G~ive~G~~ 1228 (1255)
||||+..+|++||-||||-+||+++...|++.+.+.- .|.||++.||+.+.+..+ -|++.+++|+++....+
T Consensus 148 IARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 148 IARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 9999999999999999999999999999999998753 589999999999999885 78999999999987654
No 125
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-43 Score=376.22 Aligned_cols=219 Identities=29% Similarity=0.491 Sum_probs=195.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCC-CCChHHhhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDIT-TIGLYDLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~-~i~~~~lR~~i 1081 (1255)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58999999999876 67999999999999999999999999999999999999999999999999998 48889999999
Q ss_pred EEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1082 GIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1082 ~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
|+|.|+| .+|..||.+.+.+.. ..+.+|+.+ ...++++.+++.++....| .+||||||||+|
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~--rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRva 148 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEE--RVAEALELVGLEELLDRPP-----------FNLSGGQKQRVA 148 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHH--HHHHHHHHcCchhhccCCc-----------cccCCcceeeHH
Confidence 9999999 799999999998643 245555443 2234888998887744433 579999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhh
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLR 1233 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~ 1233 (1255)
||.+|..+|+|||||||||+||+...+.+.+.++++.+ ++|+|+|||+++.+.. |||++||++|+++.+|+|+++.+
T Consensus 149 IA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 149 IAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred hhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 99999999999999999999999999999999998764 4799999999999988 99999999999999999999987
Q ss_pred cC
Q 000845 1234 RQ 1235 (1255)
Q Consensus 1234 ~~ 1235 (1255)
+.
T Consensus 229 ~~ 230 (235)
T COG1122 229 DA 230 (235)
T ss_pred hh
Confidence 63
No 126
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.5e-42 Score=377.49 Aligned_cols=219 Identities=32% Similarity=0.551 Sum_probs=198.9
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
|+++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+...+|+.+
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999964334699999999999999999999999999999999999999999999999999888877788999
Q ss_pred EEEccCCccCCCchhhhcccCCC-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1082 GIIPQDPTLFSGSVRYNLDPLSQ-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1082 ~~vpQdp~Lf~gTIr~Nl~~~~~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
+|+||+|.+|..|+++|+..... .+.+++.+ +++..++.+.+...|.|+++.+.+...+||||||||++||||
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~a 154 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILR------AAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARA 154 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHH------HHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHH
Confidence 99999999999999999975432 33445554 788899999999999999999988889999999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEc
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1226 (1255)
++.+|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 155 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 155 LLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999999999876668999999999988779999999999998765
No 127
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=351.40 Aligned_cols=470 Identities=20% Similarity=0.246 Sum_probs=333.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchhHHHHhchhhHhhhHhHHHHHH
Q 000845 724 KLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTI 803 (1255)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G~il~r~s~D~~~id~~l~~~~~~ 803 (1255)
.++..|.++.....+...+.......++.+...++|.++.++++.+|+.-+++...++++.++++|+..|. .-...++.
T Consensus 49 ~~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~IS-f~~s~lp~ 127 (546)
T COG4615 49 LVLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNIS-FAFSRLPE 127 (546)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhccccccee-ehHhhhHH
Confidence 34444555555555666677778889999999999999999999999999999999999999999999998 44455777
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCcHHH
Q 000845 804 AVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEER 883 (1255)
Q Consensus 804 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~ 883 (1255)
+.+..+..+++.+-+++.+|.+.++.+..+++.++.+.+.+...-+-.+...+....+.++++..+.|.+..+...-..+
T Consensus 128 ~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~ 207 (546)
T COG4615 128 LVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAE 207 (546)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHH
Confidence 88899999999999999999988776666655554444444333344444555667789999999999999988764433
Q ss_pred HHH--HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccCcccHHHHHHHHHHHH---HHHH
Q 000845 884 FFA--KNL----DLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALCTT-LLHKGHKGAGYTGMALSFGL---SLND 953 (1255)
Q Consensus 884 ~~~--~~~----~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~---~~~~ 953 (1255)
... .+. ...+..............|....+- ..+.+..+ ....+..+.. .+.++++ -+-.
T Consensus 208 ~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~-------~lIGlvf~lal~~~w~st~---~a~tivlvlLflr~ 277 (546)
T COG4615 208 YVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLL-------GLIGLVFWLALSLGWASTN---VAATIVLVLLFLRT 277 (546)
T ss_pred HHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHH-------HHHHHHHHHHHhhccchhh---HHHHHHHHHHHHhh
Confidence 222 111 1111111111111122333322221 11111111 1111111212 2222332 2344
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCCCCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcE
Q 000845 954 FLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHK 1033 (1255)
Q Consensus 954 ~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~ 1033 (1255)
++...+.....+-...++.+++.++...|... ......+.++|. .||++||.|.|.+.. -=+..||++|+.||.
T Consensus 278 pL~s~vgilP~l~~AqvA~~kiakle~~~~~a--~~~~~q~~p~~~---~lelrnvrfay~~~~-FhvgPiNl~ikrGel 351 (546)
T COG4615 278 PLLSAVGILPTLLTAQVAFNKIAKLELAPYKA--DFPRPQAFPDWK---TLELRNVRFAYQDNA-FHVGPINLTIKRGEL 351 (546)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhcCCccc--cCCCCCcCCccc---ceeeeeeeeccCccc-ceecceeeEEecCcE
Confidence 55556666666677788999999886533221 112223334453 699999999997654 347889999999999
Q ss_pred EEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhc
Q 000845 1034 IGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEV 1113 (1255)
Q Consensus 1034 vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~ 1113 (1255)
|-|+|.|||||||++++|.|+|.|++|+|++||.+++.-++++.|+-++-|.-|-+||+.++- +.+..+.+.+..
T Consensus 352 vFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~----~e~~as~q~i~~- 426 (546)
T COG4615 352 VFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLG----PEGKASPQLIEK- 426 (546)
T ss_pred EEEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhC----CccCCChHHHHH-
Confidence 999999999999999999999999999999999999999999999999999999999986552 222345554433
Q ss_pred cCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc
Q 000845 1114 TIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF 1193 (1255)
Q Consensus 1114 ~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~ 1193 (1255)
-|++..+..... +.+|==+ ...||-|||.|+|+--|++.+.+|+++||=.+.-||.=.+...+.+-...
T Consensus 427 -----~LqrLel~~kts-l~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~L 495 (546)
T COG4615 427 -----WLQRLELAHKTS-LNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLL 495 (546)
T ss_pred -----HHHHHHHhhhhc-ccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHH
Confidence 444444433322 1122111 13699999999999999999999999999999999999998877664433
Q ss_pred --CCcEEEEeccCchhhhhcCEEEEEeCCEEEEEc
Q 000845 1194 --ANCTVITVAHRIATVMDCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1194 --~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1226 (1255)
.|+|++.|||+-.--..+||++.|++|+++|.-
T Consensus 496 K~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 496 KEQGKTIFAISHDDHYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred HHhCCeEEEEecCchhhhhHHHHHHHhcCceeecc
Confidence 589999999999999999999999999999864
No 128
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-42 Score=395.10 Aligned_cols=221 Identities=22% Similarity=0.352 Sum_probs=184.8
Q ss_pred CceEEEEEEEEEeCCC---CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCC-----
Q 000845 1001 TGKVEIYDLQIRYRPN---APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTI----- 1072 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~---~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i----- 1072 (1255)
...|+++||+|+|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.+.
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 3469999999999642 23699999999999999999999999999999999999999999999999998653
Q ss_pred -----------ChHHhhcccEEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCc
Q 000845 1073 -----------GLYDLRSNLGIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGL 1136 (1255)
Q Consensus 1073 -----------~~~~lR~~i~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gl 1136 (1255)
+...+|++|+||+|+| .+|++|+++|+.+.. ..++++..+ .+ .+.+..+ |+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~---------~~--~~~l~~~--gL 165 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK---------LA--KFYLNKM--GL 165 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH---------HH--HHHHHHc--CC
Confidence 3567899999999998 699999999996432 123333221 11 1233322 44
Q ss_pred c-chhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhh-hcCE
Q 000845 1137 D-SLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVM-DCNM 1213 (1255)
Q Consensus 1137 d-t~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~Dr 1213 (1255)
+ ......+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .|||
T Consensus 166 ~~~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adr 245 (320)
T PRK13631 166 DDSYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADE 245 (320)
T ss_pred ChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCE
Confidence 3 34566678999999999999999999999999999999999999999999998753 5789999999999885 5999
Q ss_pred EEEEeCCEEEEEcChhHHhhc
Q 000845 1214 VLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1214 I~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|++|++|++++.|+|+++..+
T Consensus 246 i~vl~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 246 VIVMDKGKILKTGTPYEIFTD 266 (320)
T ss_pred EEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999988754
No 129
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-42 Score=369.76 Aligned_cols=209 Identities=25% Similarity=0.421 Sum_probs=181.2
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++|++|+|... +||+||||+|++||.+||+||||||||||+++++|+++|++|+|.+.|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999754 49999999999999999999999999999999999999999999999998766432 57899
Q ss_pred EEccCC---ccCCCchhhhcccCC--------CCC--h-HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1083 IIPQDP---TLFSGSVRYNLDPLS--------QFT--D-QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1083 ~vpQdp---~Lf~gTIr~Nl~~~~--------~~s--d-~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
||||.. .-|+-||+|-+.... ..+ | +++.+ ||+++++.++..+ +++ .||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~------aL~~Vgm~~~~~r-------~i~----~LS 141 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDE------ALERVGMEDLRDR-------QIG----ELS 141 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHH------HHHHcCchhhhCC-------ccc----ccC
Confidence 999965 358889999886431 111 2 45555 9999999987543 343 599
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA-NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||+||+.|||||+++|++|+|||||+++|+.++..+.+.|+++.+ ||||++|+|+++.+.. ||+|+.|. ++++..|
T Consensus 142 GGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G 220 (254)
T COG1121 142 GGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASG 220 (254)
T ss_pred cHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEecc
Confidence 9999999999999999999999999999999999999999998765 8999999999999976 99999985 5788999
Q ss_pred ChhHHhhc
Q 000845 1227 EPKKLLRR 1234 (1255)
Q Consensus 1227 ~~~eLl~~ 1234 (1255)
+|++.+..
T Consensus 221 ~~~~~~~~ 228 (254)
T COG1121 221 PPEEVLTE 228 (254)
T ss_pred ChhhccCH
Confidence 99999864
No 130
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-42 Score=354.55 Aligned_cols=224 Identities=23% Similarity=0.421 Sum_probs=192.4
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC---hHHhhc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG---LYDLRS 1079 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~---~~~lR~ 1079 (1255)
.|+++||+.+|+ +...+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|.++|.++.... ++++|+
T Consensus 3 ~i~~~nl~k~yp-~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYP-GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecC-CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 489999999997 5567999999999999999999999999999999999999999999999999999888 566788
Q ss_pred ccEEEccCCccCCC-chhhhccc------------CCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1080 NLGIIPQDPTLFSG-SVRYNLDP------------LSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1080 ~i~~vpQdp~Lf~g-TIr~Nl~~------------~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
+||+|+|++.|-+. |+.+|+.. ++-++.++-.. ..++|+++|+.+..-.. ..+
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~---Al~aLervgi~~~A~qr-----------a~~ 147 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQ---ALDALERVGILDKAYQR-----------AST 147 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHH---HHHHHHHcCcHHHHHHH-----------hcc
Confidence 99999999998865 89999742 23344433222 12389999998876543 247
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEE
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLV 1223 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv 1223 (1255)
|||||+||++|||||.++|+|++-|||+|+|||++.+.|++.|++.- .|.|||+.-|.++..++ ||||+-|++|+|+
T Consensus 148 LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~iv 227 (258)
T COG3638 148 LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIV 227 (258)
T ss_pred CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEE
Confidence 99999999999999999999999999999999999999999998764 57899999999999976 8999999999999
Q ss_pred EEcChhHHhhcCChHHHHHHH
Q 000845 1224 EYDEPKKLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1224 e~G~~~eLl~~~~~~f~~l~~ 1244 (1255)
-.|++.||-+ ..+...+.
T Consensus 228 fDg~~~el~~---~~~~~iYg 245 (258)
T COG3638 228 FDGPASELTD---EALDEIYG 245 (258)
T ss_pred EeCChhhhhH---HHHHHHhc
Confidence 9999999643 34444443
No 131
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.3e-42 Score=360.62 Aligned_cols=204 Identities=26% Similarity=0.427 Sum_probs=173.4
Q ss_pred EEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH---h-
Q 000845 1004 VEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD---L- 1077 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~---l- 1077 (1255)
++++||+..|..+. ..+|+++||+|++||.|||+||||||||||+++|.++..|++|.|.++|.|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996443 36999999999999999999999999999999999999999999999999999998543 3
Q ss_pred hcccEEEccCCccCCC-chhhhccc---CCCCCh----HHHHhccCchhHHHhccHHHHHH-hhhcCccchhcCCCCCCC
Q 000845 1078 RSNLGIIPQDPTLFSG-SVRYNLDP---LSQFTD----QEIWEVTIPSQVLEKCQLREVIQ-EKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1078 R~~i~~vpQdp~Lf~g-TIr~Nl~~---~~~~sd----~ei~~~~~~~~al~~~~l~~~i~-~lp~gldt~v~e~G~~LS 1148 (1255)
|++||+|+|+..|++. |++||+.. +..... +... ..++.+|+.+... ..| .+||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~------~l~~~lgl~~~~~~~~p-----------~eLS 144 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAE------ELLEVLGLEDRLLKKKP-----------SELS 144 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHH------HHHHhcCChhhhccCCc-----------hhcC
Confidence 5679999999999876 99999972 222221 2222 2566667765544 333 5799
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhhcCEEEEEeCCEEEE
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMDCNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive 1224 (1255)
||||||+||||||+.+|+|++.||||.+||.+|.+.|.+.+++.- .++|+|+|||+......|||++.|.+|++.+
T Consensus 145 GGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 145 GGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999999999874 3789999999999999999999999999543
No 132
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-42 Score=377.14 Aligned_cols=225 Identities=30% Similarity=0.491 Sum_probs=191.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999953 45999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCccCCCchhhhcccCCCC---ChHHHHhccCchhHHHhccHH-HHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1083 IIPQDPTLFSGSVRYNLDPLSQF---TDQEIWEVTIPSQVLEKCQLR-EVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1083 ~vpQdp~Lf~gTIr~Nl~~~~~~---sd~ei~~~~~~~~al~~~~l~-~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
|+||+|.+|+.|+++|+...... .++++.+ .++..++. +. .......||||||||++||
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~------~l~~~~l~~~~-----------~~~~~~~LS~G~~qrl~la 143 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEY------YLSIVGLNKEY-----------ATRDVKNLSGGEAQRVSIA 143 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHH------HHHHcCCCHHH-----------hhCCcccCCHHHHHHHHHH
Confidence 99999999999999999743211 1223333 56666553 22 2234567999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcC
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
||++++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 223 (241)
T PRK14250 144 RTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNP 223 (241)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCC
Confidence 99999999999999999999999999999998864 37899999999999876 9999999999999999999998765
Q ss_pred ChHHHHHHHHH
Q 000845 1236 DSLFAQLVKEY 1246 (1255)
Q Consensus 1236 ~~~f~~l~~~~ 1246 (1255)
...|.+.+...
T Consensus 224 ~~~~~~~~~~~ 234 (241)
T PRK14250 224 QNEVTKLFIQG 234 (241)
T ss_pred CcHHHHHHHhc
Confidence 54565555433
No 133
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-42 Score=379.81 Aligned_cols=216 Identities=29% Similarity=0.468 Sum_probs=182.5
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh---HHhhcc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL---YDLRSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~---~~lR~~ 1080 (1255)
|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+.
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 578999999953 459999999999999999999999999999999999999999999999999987764 567889
Q ss_pred cEEEccCCccCCC-chhhhcccCC----CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1081 LGIIPQDPTLFSG-SVRYNLDPLS----QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1081 i~~vpQdp~Lf~g-TIr~Nl~~~~----~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
++|+||++.+|.+ |+++|+.... ..+.++..+ ...++++.+++.++... ...+||||||||+
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv 145 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIRE--IVLEKLEAVGLRGAEDL-----------YPAELSGGMKKRV 145 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHH--HHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHH
Confidence 9999999999986 9999996421 123222211 00125666665443322 2347999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
+||||++++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 146 ~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 146 ALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELR 225 (235)
T ss_pred HHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHc
Confidence 999999999999999999999999999999999988653 7899999999999876 9999999999999999999987
Q ss_pred hc
Q 000845 1233 RR 1234 (1255)
Q Consensus 1233 ~~ 1234 (1255)
..
T Consensus 226 ~~ 227 (235)
T cd03261 226 AS 227 (235)
T ss_pred CC
Confidence 64
No 134
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.7e-42 Score=377.84 Aligned_cols=211 Identities=27% Similarity=0.480 Sum_probs=181.5
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccC-----CCCCCEEEEcCEeCCCCC--hHH
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLV-----EPTGGKIIIDGLDITTIG--LYD 1076 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~-----~~~~G~I~idG~di~~i~--~~~ 1076 (1255)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGD--KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 578999999953 35999999999999999999999999999999999999 999999999999998776 567
Q ss_pred hhcccEEEccCCccCCCchhhhcccCCC---C-C----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1077 LRSNLGIIPQDPTLFSGSVRYNLDPLSQ---F-T----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1077 lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~---~-s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
+|++++|+||++.+|..|+++|+.+... . . ++++.+ +++.+++.+.....++ +.+||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~~---------~~~LS 143 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEE------ALRKAALWDEVKDRLH---------ALGLS 143 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHH------HHHHcCCChHHhccCC---------cccCC
Confidence 7899999999999998899999974211 1 1 122333 6677776554433211 36899
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcC
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1227 (1255)
||||||++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 144 gG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 223 (227)
T cd03260 144 GGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGP 223 (227)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecC
Confidence 99999999999999999999999999999999999999999987656899999999999875 99999999999999999
Q ss_pred hhHH
Q 000845 1228 PKKL 1231 (1255)
Q Consensus 1228 ~~eL 1231 (1255)
++++
T Consensus 224 ~~~~ 227 (227)
T cd03260 224 TEQI 227 (227)
T ss_pred cccC
Confidence 8764
No 135
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-42 Score=385.89 Aligned_cols=222 Identities=23% Similarity=0.386 Sum_probs=197.1
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
..|+++||+.+|. ...+++|+||+|++||.++++|||||||||++++|.||..|++|+|.+||.|+..++++ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999996 45799999999999999999999999999999999999999999999999999999987 5899
Q ss_pred EEEccCCccCCC-chhhhcccCCC----CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQ----FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~----~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
++|+|+..||+- ||++|+.+.-. ..++|+.+ ...++|+.++|.++-...|. .|||||+||+|
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~--rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVA 146 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKA--RVEEALELVGLEGFADRKPH-----------QLSGGQQQRVA 146 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHH--HHHHHHHHcCchhhhhhChh-----------hhChHHHHHHH
Confidence 999999999976 99999975322 34444322 12348999999998777764 69999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhh
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLR 1233 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~ 1233 (1255)
|||||..+|++|+||||-|+||..-...++.-+++.. .|.|.|+|||+-+.... +|||.||++|+|...|+|+|+..
T Consensus 147 LARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~ 226 (352)
T COG3842 147 LARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYE 226 (352)
T ss_pred HHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhh
Confidence 9999999999999999999999999999999888754 37899999999998766 89999999999999999999999
Q ss_pred cCChHHH
Q 000845 1234 RQDSLFA 1240 (1255)
Q Consensus 1234 ~~~~~f~ 1240 (1255)
+|...|-
T Consensus 227 ~P~~~fV 233 (352)
T COG3842 227 RPATRFV 233 (352)
T ss_pred CcchHHH
Confidence 9887774
No 136
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=392.48 Aligned_cols=222 Identities=24% Similarity=0.364 Sum_probs=190.3
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++|++++|+.+ ..+|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+++.. +++|+
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999422 4699999999999999999999999999999999999999999999999999987765 47899
Q ss_pred EEccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
||||++.+|+. |+++|+.+.. ..+.++..+ ...++++.+++.++....| .+||||||||++||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~--~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalA 146 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE--RVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMG 146 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH--HHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHH
Confidence 99999999964 9999997432 123222211 0113788888877665554 47999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcC
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
|||+++|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++++++
T Consensus 147 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 147 RAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999999987654 7899999999998865 9999999999999999999999887
Q ss_pred ChHHH
Q 000845 1236 DSLFA 1240 (1255)
Q Consensus 1236 ~~~f~ 1240 (1255)
...|.
T Consensus 227 ~~~~~ 231 (356)
T PRK11650 227 ASTFV 231 (356)
T ss_pred ccHHH
Confidence 65554
No 137
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-41 Score=377.02 Aligned_cols=219 Identities=22% Similarity=0.400 Sum_probs=189.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC---CCCCEEEEcCEeCCCCChHHhhc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE---PTGGKIIIDGLDITTIGLYDLRS 1079 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~---~~~G~I~idG~di~~i~~~~lR~ 1079 (1255)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.+.+...+|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 3789999999963 469999999999999999999999999999999999985 69999999999999888888899
Q ss_pred ccEEEccCCccCCCchhhhcccCCC---C------ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1080 NLGIIPQDPTLFSGSVRYNLDPLSQ---F------TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1080 ~i~~vpQdp~Lf~gTIr~Nl~~~~~---~------sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
.++|+||+|.+|+.|+++|+.+... . .++++.+ +++.+++.+++.. .....+.+||||
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~-------~~~~~~~~LS~G 146 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVD------CLQKVGLFEEVKD-------KLKQNALALSGG 146 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHH------HHHHcCCChhhhH-------HhcCCcccCCHH
Confidence 9999999999999999999964311 1 1112333 6777777554432 233455789999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChh
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPK 1229 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1229 (1255)
||||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 226 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESK 226 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999999987778999999999998865 9999999999999999999
Q ss_pred HHhhcCC
Q 000845 1230 KLLRRQD 1236 (1255)
Q Consensus 1230 eLl~~~~ 1236 (1255)
++...+.
T Consensus 227 ~~~~~~~ 233 (246)
T PRK14269 227 EFFENPK 233 (246)
T ss_pred HHHhCCC
Confidence 9987543
No 138
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=390.97 Aligned_cols=222 Identities=25% Similarity=0.380 Sum_probs=190.0
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
..|+++||+++|.. ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+.+ +++|
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 36999999999953 4699999999999999999999999999999999999999999999999999887654 6789
Q ss_pred EEEccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
+||+|++.+|+. |+++|+.+.- ..+.+++.+ ...++++.+++.++..+. ...||||||||+||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~--~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaL 147 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQ--RVKEALELVDLAGFEDRY-----------VDQISGGQQQRVAL 147 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHH--HHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHH
Confidence 999999999976 9999997431 123333221 011277777776554433 35799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||+++|+|||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||+||++|+|++.|+|+++.++
T Consensus 148 ARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 148 ARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999999988754 7899999999999866 999999999999999999999988
Q ss_pred CChHHH
Q 000845 1235 QDSLFA 1240 (1255)
Q Consensus 1235 ~~~~f~ 1240 (1255)
+...|.
T Consensus 228 p~~~~~ 233 (351)
T PRK11432 228 PASRFM 233 (351)
T ss_pred CCchHH
Confidence 776554
No 139
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=392.36 Aligned_cols=224 Identities=25% Similarity=0.404 Sum_probs=186.7
Q ss_pred EEEEEEEEEeCC--CCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH---hh
Q 000845 1004 VEIYDLQIRYRP--NAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD---LR 1078 (1255)
Q Consensus 1004 I~~~nvs~~Y~~--~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~---lR 1078 (1255)
|+++||+++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999962 2346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cccEEEccCCccCC-CchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1079 SNLGIIPQDPTLFS-GSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1079 ~~i~~vpQdp~Lf~-gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
++|+||||++.+|. .|+++|+.... ..+.++..+ ...++++.+++.+... ....+||||||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~--~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qR 148 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA--RVTELLELVGLSDKAD-----------RYPAQLSGGQKQR 148 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCCchhhh-----------CChhhCCHHHHHH
Confidence 89999999999986 69999997421 222222211 0011555555544433 2335799999999
Q ss_pred HHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1155 IGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1155 l~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
++|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 v~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~ 228 (343)
T PRK11153 149 VAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEV 228 (343)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999999999999999999998653 7899999999999876 999999999999999999999
Q ss_pred hhcCChHHH
Q 000845 1232 LRRQDSLFA 1240 (1255)
Q Consensus 1232 l~~~~~~f~ 1240 (1255)
..++...+.
T Consensus 229 ~~~~~~~~~ 237 (343)
T PRK11153 229 FSHPKHPLT 237 (343)
T ss_pred HhCCCcHHH
Confidence 876544343
No 140
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.9e-41 Score=330.31 Aligned_cols=210 Identities=22% Similarity=0.394 Sum_probs=184.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|.+++|.|+|.. .+. ..+++|++||+|||+||||||||||++++.||..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~~---~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LPM---RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ceE---EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567899999953 332 46899999999999999999999999999999999999999999999887765 577999
Q ss_pred EccCCccCCC-chhhhcccCC----CCC--h-HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLS----QFT--D-QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~----~~s--d-~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
++||..||.- ||++|+..+- ..+ + +.+. .++.++|+.++.+.+|. .||||||||+
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~------~aa~~vGl~~~~~RLP~-----------~LSGGqRQRv 138 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVE------AAAAQVGLAGFLKRLPG-----------ELSGGQRQRV 138 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHH------HHHHHhChhhHhhhCcc-----------ccCchHHHHH
Confidence 9999999976 9999997432 222 2 2333 38999999999999985 5899999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
||||+|+|+.+||+||||.|+|||.-...+...+.+.. ++.|+++|||.++.+.. +||++++++|||...|+-++++
T Consensus 139 ALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~ 218 (231)
T COG3840 139 ALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELL 218 (231)
T ss_pred HHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHh
Confidence 99999999999999999999999999999888887755 46799999999999876 9999999999999999999999
Q ss_pred hcCC
Q 000845 1233 RRQD 1236 (1255)
Q Consensus 1233 ~~~~ 1236 (1255)
+...
T Consensus 219 ~~~~ 222 (231)
T COG3840 219 SGKA 222 (231)
T ss_pred ccCC
Confidence 8643
No 141
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=2e-38 Score=372.89 Aligned_cols=469 Identities=20% Similarity=0.222 Sum_probs=335.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccc------hhHHHHhchhhHhhhHh
Q 000845 724 KLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVG------RILSRVSSDLSIIDLDL 797 (1255)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~~G------~il~r~s~D~~~id~~l 797 (1255)
..+.+|..++.+...+...+.|+......+.-..|-..++++-+... .||.....| +.=+|+.+|+...-...
T Consensus 87 ~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t 165 (604)
T COG4178 87 QQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-RYYRLAQAGGIGLIDNPDQRIQEDIRNFTETT 165 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHhcccccCCCChHHhHHHHHHHHHhhH
Confidence 34566777777777777888888888888888888888888888777 444443332 44579999997766655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---------------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000845 798 SIKSTIAVGTTMAVISTFVVLGA---------------LTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLA 862 (1255)
Q Consensus 798 ~~~~~~~~~~~~~~i~~~~~~~~---------------~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~ 862 (1255)
......++.++++++.-.+++.. +..++..+++..++..-++...+.+....+.-......+.+.
T Consensus 166 ~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR 245 (604)
T COG4178 166 LDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFR 245 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHH
Confidence 55555666666555554444431 111222222222222223333344433333333344445555
Q ss_pred HHHHHHHhchHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCcccHH
Q 000845 863 SHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWLI---QRLETLSAIVLATSALCTTLLHKGHKGAG 939 (1255)
Q Consensus 863 ~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (1255)
..+.-.-++...|-.|+.|+...++..+..+...+.+......+.++. .....++.++... +.+-....|.++.|
T Consensus 246 ~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~l--i~ap~~f~g~i~~G 323 (604)
T COG4178 246 YSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPIL--IAAPRYFSGQITFG 323 (604)
T ss_pred HHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHH--hccHhhhcCcChHH
Confidence 666667778889999999988777777766666555544444433333 2222222211111 11112346888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcC------CCCCcccccCCCCCCCCCCCceEEEEEEEEEe
Q 000845 940 YTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRI------PSEAPELVQKNSPAPDWPPTGKVEIYDLQIRY 1013 (1255)
Q Consensus 940 ~~g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~------~~e~~~~~~~~~~~~~~p~~g~I~~~nvs~~Y 1013 (1255)
.+..+..-..++...+.|++..+..+.....++.|+.++.+. +++.+.... ......-.....|.|+|++..-
T Consensus 324 ~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~l~~ 402 (604)
T COG4178 324 GLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTG-RRIDFDDNADHGITLENLSLRT 402 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccc-ccccccccccceeEEeeeeEEC
Confidence 888888888999999999999999999999999999998632 211111100 0000000014689999999998
Q ss_pred CCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCC
Q 000845 1014 RPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSG 1093 (1255)
Q Consensus 1014 ~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~g 1093 (1255)
+++. ..++++||+|+|||.+-|.|+||||||||+++|.|+.+.-+|+|.+-. -+++-++||.|++-.|
T Consensus 403 p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~G 470 (604)
T COG4178 403 PDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQG 470 (604)
T ss_pred CCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCc
Confidence 6554 689999999999999999999999999999999999999999987541 2458999999999999
Q ss_pred chhhhcc-cCC--CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEE
Q 000845 1094 SVRYNLD-PLS--QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVL 1170 (1255)
Q Consensus 1094 TIr~Nl~-~~~--~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiL 1170 (1255)
|+||-|. |.. .++|+|+.+ +|.+|+|.+++.++.+ .+. -..-||+||||||++||.+|++|++++|
T Consensus 471 tLre~l~YP~~~~~~~d~~l~~------vL~~vgL~~L~~rl~~-~~~----W~~vLS~GEqQRlafARilL~kP~~v~L 539 (604)
T COG4178 471 TLREALCYPNAAPDFSDAELVA------VLHKVGLGDLAERLDE-EDR----WDRVLSGGEQQRLAFARLLLHKPKWVFL 539 (604)
T ss_pred cHHHHHhCCCCCCCCChHHHHH------HHHHcCcHHHHHHHhc-cCc----HhhhcChhHHHHHHHHHHHHcCCCEEEE
Confidence 9999997 333 389999998 9999999999998743 332 3356999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeC
Q 000845 1171 DEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSD 1219 (1255)
Q Consensus 1171 DE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~ 1219 (1255)
|||||+||+++|..+.+.+++..+++|+|.|+||.....-.++.+-+++
T Consensus 540 DEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 540 DEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred ecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 9999999999999999999999999999999999887777777665543
No 142
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=382.54 Aligned_cols=215 Identities=27% Similarity=0.455 Sum_probs=187.8
Q ss_pred eEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1003 KVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
.++++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999643 24599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCc--cCCCchhhhcccCC---CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1082 GIIPQDPT--LFSGSVRYNLDPLS---QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1082 ~~vpQdp~--Lf~gTIr~Nl~~~~---~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
+|+||+|. ++..|+++||.+.. ..+. +.+.+ +++.+++.++.+..| .+||||||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~------~l~~~gL~~~~~~~~-----------~~LSgGq~ 146 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNE------ALELVGMQDFKEREP-----------ARLSGGQK 146 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHH------HHHHCCCHhHhhCCc-----------ccCCHHHH
Confidence 99999983 56779999997431 1232 22333 777888766654433 57999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhH
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~e 1230 (1255)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|++++
T Consensus 147 qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~ 226 (279)
T PRK13650 147 QRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRE 226 (279)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999988753 789999999999997799999999999999999999
Q ss_pred Hhhc
Q 000845 1231 LLRR 1234 (1255)
Q Consensus 1231 Ll~~ 1234 (1255)
+.+.
T Consensus 227 ~~~~ 230 (279)
T PRK13650 227 LFSR 230 (279)
T ss_pred HHcC
Confidence 8765
No 143
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.7e-41 Score=370.71 Aligned_cols=216 Identities=29% Similarity=0.490 Sum_probs=194.7
Q ss_pred CceEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhc
Q 000845 1001 TGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRS 1079 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~ 1079 (1255)
.|.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+....|+
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 5789999999999643 246999999999999999999999999999999999999999999999999998888778889
Q ss_pred ccEEEccCCccCCCchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1080 NLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1080 ~i~~vpQdp~Lf~gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
.++|+||+|.+|++|+++|++... ....+++++ ..+..++.+++..+|.|+++.+.....+||||||||++||
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~------~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~la 162 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKE------AAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIA 162 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHH------HHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHH
Confidence 999999999999999999998532 233344444 4566778899999988999989998999999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEE
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKL 1222 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~i 1222 (1255)
||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 163 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 163 RALIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999999999999987777899999999999988999999999975
No 144
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.9e-41 Score=369.04 Aligned_cols=210 Identities=26% Similarity=0.386 Sum_probs=179.6
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++||+++|+.+..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+|++++|
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999643256999999999999999999999999999999999999999999999999987643 567889999
Q ss_pred EccCCccC-CCchhhhcccCC---CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLF-SGSVRYNLDPLS---QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf-~gTIr~Nl~~~~---~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||+|.+| ..|+++|+.... .... +++.+ +++..++.+... + ...+||+|||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~-------~----~~~~LS~G~~qrv 142 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVEL------LLRVLGLTDKAN-------K----RARTLSGGMKRKL 142 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHH------HHHHcCCHHHHh-------C----hhhhCCHHHHHHH
Confidence 99999998 579999996421 1222 22233 566666654332 2 2357999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
+||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 143 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 143 SLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999999999988777999999999999976 999999999999999998875
No 145
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.1e-41 Score=389.41 Aligned_cols=209 Identities=25% Similarity=0.406 Sum_probs=179.2
Q ss_pred CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh----hcccEEEccCCccCCC
Q 000845 1018 PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL----RSNLGIIPQDPTLFSG 1093 (1255)
Q Consensus 1018 ~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l----R~~i~~vpQdp~Lf~g 1093 (1255)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.|+...+...+ |++|+||||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 459999999999999999999999999999999999999999999999999999998887 7899999999999985
Q ss_pred -chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEE
Q 000845 1094 -SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILV 1169 (1255)
Q Consensus 1094 -TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILi 1169 (1255)
|+++|+.+.. ..+.++..+ ...++++.++|.++....| .+||||||||++|||||+++|+|||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~--~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLL 152 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE--KALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILL 152 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH--HHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999996421 122222211 0112677777765554443 4799999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcCChHH
Q 000845 1170 LDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQDSLF 1239 (1255)
Q Consensus 1170 LDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~~~f 1239 (1255)
||||||+||+.+.+.+++.+.+.. .++|+|+|||+++.+.. ||||++|++|++++.|+|++++.++...|
T Consensus 153 lDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 153 MDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 999999999999999999998764 37899999999998755 99999999999999999999998765444
No 146
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-41 Score=381.14 Aligned_cols=220 Identities=30% Similarity=0.473 Sum_probs=183.7
Q ss_pred EEEEEEEEEeCCCC---CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC--hHHhh
Q 000845 1004 VEIYDLQIRYRPNA---PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG--LYDLR 1078 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~---~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~--~~~lR 1078 (1255)
|+++||+++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999996432 36999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cccEEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1079 SNLGIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1079 ~~i~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
++|+||||+| .+|+.|+++|+.+.. ..+.++..+ ...++++.+++.. .+........|||||||
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~q 151 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIEN--RVKRAMNIVGLDY---------EDYKDKSPFELSGGQKR 151 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHH--HHHHHHHHcCCCc---------hhhccCCcccCCHHHHH
Confidence 9999999998 578899999997421 233333221 0012566666530 02233344689999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|++++
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999988753 7899999999999865 99999999999999999999
Q ss_pred Hhhc
Q 000845 1231 LLRR 1234 (1255)
Q Consensus 1231 Ll~~ 1234 (1255)
+.+.
T Consensus 232 ~~~~ 235 (287)
T PRK13637 232 VFKE 235 (287)
T ss_pred HHhC
Confidence 8753
No 147
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-41 Score=379.05 Aligned_cols=212 Identities=23% Similarity=0.410 Sum_probs=185.0
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
-|+++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999632 45999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCC--ccCCCchhhhcccCC---CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1083 IIPQDP--TLFSGSVRYNLDPLS---QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1083 ~vpQdp--~Lf~gTIr~Nl~~~~---~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
|+||+| .+|..|+++|+.+.. ..+. +++.+ +++.+++.+...+.| ..|||||||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~L~~~~~~~~-----------~~LSgG~~q 145 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEE------ALKAVRMWDFRDKPP-----------YHLSYGQKK 145 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHH------HHHHCCCHHHhcCCh-----------hhCCHHHHH
Confidence 999998 678899999997421 1222 22333 777888766654443 369999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
|++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|+++++
T Consensus 146 rv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 146 RVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999999999999999998764 47899999999999865 999999999999999998765
Q ss_pred h
Q 000845 1232 L 1232 (1255)
Q Consensus 1232 l 1232 (1255)
.
T Consensus 226 ~ 226 (274)
T PRK13647 226 T 226 (274)
T ss_pred c
Confidence 3
No 148
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.6e-41 Score=388.90 Aligned_cols=221 Identities=24% Similarity=0.355 Sum_probs=187.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++||+++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.. ++.++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999963 4599999999999999999999999999999999999999999999999999887764 67899
Q ss_pred EEccCCccCC-CchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1083 IIPQDPTLFS-GSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1083 ~vpQdp~Lf~-gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
||||++.+|+ .|+++|+.+.- ..+.++..+ ...++++..++.++.+ ....+||||||||++||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~--~~~~~l~~l~L~~~~~-----------~~~~~LSgGq~QRvaLA 146 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAE--RVAELLDLVGLPGSER-----------KYPGQLSGGQQQRVALA 146 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcCCCchhh-----------CChhhCCHHHHHHHHHH
Confidence 9999999996 59999997421 122222211 0012566665554433 34457999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcC
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
|||+++|++|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++
T Consensus 147 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 147 RALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 999999999999999999999999999999988654 7899999999999866 9999999999999999999999987
Q ss_pred ChHHH
Q 000845 1236 DSLFA 1240 (1255)
Q Consensus 1236 ~~~f~ 1240 (1255)
...|.
T Consensus 227 ~~~~~ 231 (353)
T TIGR03265 227 ATPFV 231 (353)
T ss_pred CCHHH
Confidence 76663
No 149
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-41 Score=352.38 Aligned_cols=223 Identities=27% Similarity=0.401 Sum_probs=182.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.+++++|+.+|.. ..||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.++|.++..- ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 5899999999965 5699999999999999999999999999999999999999999999999988442 46799
Q ss_pred EEccCCccCC-CchhhhcccCCC---CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1083 IIPQDPTLFS-GSVRYNLDPLSQ---FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1083 ~vpQdp~Lf~-gTIr~Nl~~~~~---~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
||+|++.||+ -|+++|+.+.-+ .+.+|-.+ ...+.|+.+||.++-+..|. +||||||||++||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~--~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiA 142 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARE--RAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIA 142 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHH--HHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHH
Confidence 9999999998 599999974322 12221111 11248999999999887774 6999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeC--CEE---EEEcChhH
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSD--GKL---VEYDEPKK 1230 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~--G~i---ve~G~~~e 1230 (1255)
|||+.+|+||+||||.++||+.|...+|+-+.+..+ ++||++|||+++.... +|||+||.+ |+| ++.+-|..
T Consensus 143 RAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~~~~~i~l~rp 222 (248)
T COG1116 143 RALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIGEELEIDLPRP 222 (248)
T ss_pred HHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcceeeEEecCCCCC
Confidence 999999999999999999999999999999887653 5899999999998766 999999999 545 33332211
Q ss_pred HhhcCChHHHHHHHHH
Q 000845 1231 LLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1231 Ll~~~~~~f~~l~~~~ 1246 (1255)
- ...+..|..+.++-
T Consensus 223 R-~~~~~~f~~l~~~i 237 (248)
T COG1116 223 R-IRGDPEFLELREEL 237 (248)
T ss_pred c-cccChHHHHHHHHH
Confidence 1 22345676666554
No 150
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-41 Score=370.71 Aligned_cols=216 Identities=25% Similarity=0.385 Sum_probs=180.1
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999953 469999999999999999999999999999999999999999999999999876653 3678999
Q ss_pred EccCCccCC-CchhhhcccCCC---C----ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFS-GSVRYNLDPLSQ---F----TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~-gTIr~Nl~~~~~---~----sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||+|.+|. .|+++|+.+... . ..++..+ ...++++..++.+... ....+||||||||+
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl 145 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRA--KVHELLKLVQLDWLAD-----------RYPAQLSGGQRQRV 145 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHH--HHHHHHHHcCChhhhh-----------cChhhCCHHHHHHH
Confidence 999999986 599999974311 1 1111111 0012556666544433 23357999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
+|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 146 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (239)
T cd03296 146 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVY 225 (239)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHh
Confidence 999999999999999999999999999999999988643 7899999999998865 9999999999999999999997
Q ss_pred hcCC
Q 000845 1233 RRQD 1236 (1255)
Q Consensus 1233 ~~~~ 1236 (1255)
+.+.
T Consensus 226 ~~~~ 229 (239)
T cd03296 226 DHPA 229 (239)
T ss_pred cCCC
Confidence 6543
No 151
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.5e-40 Score=370.46 Aligned_cols=219 Identities=24% Similarity=0.355 Sum_probs=193.0
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcc
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSN 1080 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~ 1080 (1255)
.+.|+++|+++. + .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~---~-~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLV---G-APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEe---c-ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 457999999985 2 4599999999999999999999999999999999999999999999998 3
Q ss_pred cEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1081 LGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1081 i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
|+|+||++.+|++|+++|+.+.....+.++.+ +++.+++.+.+..+|.++++.+++.+.+||||||||++||||
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~------~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAra 173 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKS------VVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARA 173 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHH------HHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHH
Confidence 99999999999999999997543333444444 677888889999999999999999899999999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHHH-HHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhcCChHH
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQNT-IRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLF 1239 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~~-l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~~~f 1239 (1255)
++++|+||||||||++||+++.+.+.+. +++...++|+|+|||+++.+..||+|++|++|++++.|+++++.+. ...|
T Consensus 174 L~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~ 252 (282)
T cd03291 174 VYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDF 252 (282)
T ss_pred HhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHH
Confidence 9999999999999999999999988765 4555567899999999999988999999999999999999999864 3455
Q ss_pred HHHH
Q 000845 1240 AQLV 1243 (1255)
Q Consensus 1240 ~~l~ 1243 (1255)
.+.+
T Consensus 253 ~~~~ 256 (282)
T cd03291 253 SSKL 256 (282)
T ss_pred HHHH
Confidence 5444
No 152
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=373.41 Aligned_cols=220 Identities=24% Similarity=0.390 Sum_probs=187.8
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCC--CC
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITT--IG 1073 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~--i~ 1073 (1255)
.+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 467999999999963 469999999999999999999999999999999999986 589999999999863 45
Q ss_pred hHHhhcccEEEccCCccCCCchhhhcccCC----CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCC
Q 000845 1074 LYDLRSNLGIIPQDPTLFSGSVRYNLDPLS----QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1074 ~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~----~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
...+|++++|+||+|.+|+.|+++|+.... ..+. +++.+ +++.+++.+.+. ........
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~-------~~~~~~~~ 155 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEW------ALTKAALWNEVK-------DKLHQSGY 155 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHH------HHHHcCCChhhH-------HHHhcCCC
Confidence 667899999999999999999999997421 1222 22333 666666543322 22344557
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1224 (1255)
+||||||||++||||++++|+||||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 156 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 235 (260)
T PRK10744 156 SLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIE 235 (260)
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 89999999999999999999999999999999999999999999988677899999999999865 99999999999999
Q ss_pred EcChhHHhhcC
Q 000845 1225 YDEPKKLLRRQ 1235 (1255)
Q Consensus 1225 ~G~~~eLl~~~ 1235 (1255)
.|+++++...+
T Consensus 236 ~g~~~~~~~~~ 246 (260)
T PRK10744 236 FGNTDTIFTKP 246 (260)
T ss_pred eCCHHHHHhCC
Confidence 99999998754
No 153
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-41 Score=377.95 Aligned_cols=219 Identities=23% Similarity=0.437 Sum_probs=189.2
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++.|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999644456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1083 IIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1083 ~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
|+||+| .++..|+++||.... ..+.++..+ ...++++.+++.+++...| ..||||||||++|
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~--~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~l 151 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVE--RVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAI 151 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHH--HHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHH
Confidence 999998 466789999997431 123322211 0123777777776665544 4799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 152 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 152 AGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999999998754 7899999999999988999999999999999999988764
No 154
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=6.8e-41 Score=372.40 Aligned_cols=225 Identities=24% Similarity=0.390 Sum_probs=186.7
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC-----CCEEEEcCEeCCCC--ChHH
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT-----GGKIIIDGLDITTI--GLYD 1076 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~-----~G~I~idG~di~~i--~~~~ 1076 (1255)
++++||+++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGE--KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECC--eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 789999999963 35999999999999999999999999999999999999998 99999999998763 4556
Q ss_pred hhcccEEEccCCccCCCchhhhcccC---CC-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1077 LRSNLGIIPQDPTLFSGSVRYNLDPL---SQ-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1077 lR~~i~~vpQdp~Lf~gTIr~Nl~~~---~~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
.|++++|+||++.+|+.|+++|+... .. .+.++..+ ...++++..++.+.+. ........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 150 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE--IVEESLKKAALWDEVK-------DRLHDSALGLSGGQQ 150 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH--HHHHHHHHcCCCcchh-------hHhhCCcccCCHHHH
Confidence 78899999999999999999999632 11 12221111 0012666666653331 122334468999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
||++||||++++|+++||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 151 QRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667899999999999876 999999999999999999999
Q ss_pred hhcCChHH
Q 000845 1232 LRRQDSLF 1239 (1255)
Q Consensus 1232 l~~~~~~f 1239 (1255)
..++...+
T Consensus 231 ~~~~~~~~ 238 (247)
T TIGR00972 231 FTNPKEKR 238 (247)
T ss_pred HhCCCChH
Confidence 87654443
No 155
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-41 Score=373.94 Aligned_cols=222 Identities=21% Similarity=0.324 Sum_probs=187.8
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCC--CChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITT--IGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~--i~~~ 1075 (1255)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 6999999999963 4599999999999999999999999999999999999997 48999999999863 3445
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCCC----CCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLSQ----FTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~----~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
.+|++++|+||+|.+|..|+++|+.+... ... +.+.+ +++.+++.+.+ ++.+++ ...+|
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~l---~~~~~~----~~~~L 151 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQ------SLKKSALWNEV---KDKLNT----NALSL 151 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHH------HHHHhCCchhh---HHHHhC----CcccC
Confidence 67899999999999999999999974211 111 22222 66776664333 223444 34689
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 152 SgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g 231 (254)
T PRK14273 152 SGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEES 231 (254)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999988777899999999999866 9999999999999999
Q ss_pred ChhHHhhcCChHH
Q 000845 1227 EPKKLLRRQDSLF 1239 (1255)
Q Consensus 1227 ~~~eLl~~~~~~f 1239 (1255)
+++++.+++.-.|
T Consensus 232 ~~~~~~~~~~~~~ 244 (254)
T PRK14273 232 STDELFFNPKNTK 244 (254)
T ss_pred CHHHHHhCCCChH
Confidence 9999987655444
No 156
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.3e-41 Score=367.33 Aligned_cols=202 Identities=24% Similarity=0.359 Sum_probs=173.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChH---Hhhcc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLY---DLRSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~---~lR~~ 1080 (1255)
|+++|++++|+.+.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 689999999964434699999999999999999999999999999999999999999999999999876543 47889
Q ss_pred cEEEccCCccCC-CchhhhcccCC---CCC----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1081 LGIIPQDPTLFS-GSVRYNLDPLS---QFT----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1081 i~~vpQdp~Lf~-gTIr~Nl~~~~---~~s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
++|+||+|.+|. .|+++|+.... ... ++++.+ +++.+++.+.....| .+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LSgG~~ 144 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSA------ALEKVGLEGKAHALP-----------MQLSGGEQ 144 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHH------HHHHcCChhhhhCCh-----------hhCCHHHH
Confidence 999999999987 59999997421 111 233443 777777766554433 47999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEE
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKL 1222 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1222 (1255)
||++|||||+++|+||||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 145 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 145 QRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999999998764 47899999999999976 899999999985
No 157
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=8.4e-41 Score=385.88 Aligned_cols=220 Identities=27% Similarity=0.383 Sum_probs=186.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++|++++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++|+
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3889999999953 469999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEccCCccCCC-chhhhcccCC-------CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLS-------QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~-------~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
||||++.+|+. |+++|+.+.. ..+.++..+ ...++++.+++.++.+..| ..||||||||
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QR 144 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA--KVTQLLEMVQLAHLADRYP-----------AQLSGGQKQR 144 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH--HHHHHHHHcCCchhhhCCh-----------hhCCHHHHHH
Confidence 99999999975 9999997431 122222211 0112677777765544333 4799999999
Q ss_pred HHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1155 IGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1155 l~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
++|||||+++|++||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|+|++.|+|+++
T Consensus 145 valArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i 224 (353)
T PRK10851 145 VALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQV 224 (353)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999999999999999999988754 6899999999999876 999999999999999999999
Q ss_pred hhcCChHH
Q 000845 1232 LRRQDSLF 1239 (1255)
Q Consensus 1232 l~~~~~~f 1239 (1255)
+.++...|
T Consensus 225 ~~~p~~~~ 232 (353)
T PRK10851 225 WREPATRF 232 (353)
T ss_pred HhCccchH
Confidence 98776544
No 158
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-41 Score=372.96 Aligned_cols=211 Identities=28% Similarity=0.464 Sum_probs=179.5
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC---hHHhhcc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG---LYDLRSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~---~~~lR~~ 1080 (1255)
++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|+.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 46999999999999999999999999999999999999999999999999998876 4567889
Q ss_pred cEEEccCCccCC-CchhhhcccCCC------------CCh---HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCC
Q 000845 1081 LGIIPQDPTLFS-GSVRYNLDPLSQ------------FTD---QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDG 1144 (1255)
Q Consensus 1081 i~~vpQdp~Lf~-gTIr~Nl~~~~~------------~sd---~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G 1144 (1255)
++|+||++.+|. .|+++|+..... .++ +++.+ +++..++.+ ......
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~-----------~~~~~~ 142 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALA------ALERVGLLD-----------KAYQRA 142 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHH------HHHHcCChh-----------hhCCCc
Confidence 999999999887 699999963210 111 12222 455554433 333445
Q ss_pred CCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCE
Q 000845 1145 ANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGK 1221 (1255)
Q Consensus 1145 ~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1221 (1255)
.+||||||||++||||++++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|+
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~ 222 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGR 222 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6899999999999999999999999999999999999999999999864 37899999999999985 99999999999
Q ss_pred EEEEcChhHHh
Q 000845 1222 LVEYDEPKKLL 1232 (1255)
Q Consensus 1222 ive~G~~~eLl 1232 (1255)
+++.|+++++.
T Consensus 223 i~~~~~~~~~~ 233 (241)
T cd03256 223 IVFDGPPAELT 233 (241)
T ss_pred EEeecCHHHhh
Confidence 99999999874
No 159
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-41 Score=372.95 Aligned_cols=219 Identities=23% Similarity=0.383 Sum_probs=186.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCC--CChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITT--IGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~--i~~~ 1075 (1255)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999953 459999999999999999999999999999999999975 589999999999875 3455
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCC---CC-C----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLS---QF-T----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~-s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
.+|++++|+||++.+|..|+++|+.+.. .. . ++++.+ +++.+++.+.+.. .......+|
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~-------~~~~~~~~L 150 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVER------SLRHAALWDEVKD-------RLHESALGL 150 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHH------HHHHcCCchhhhH-------HhhCCcccC
Confidence 6789999999999999999999996421 11 1 122333 6677776544322 233445689
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||||||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 151 SgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g 230 (253)
T PRK14242 151 SGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVG 230 (253)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999987667899999999999865 9999999999999999
Q ss_pred ChhHHhhcCC
Q 000845 1227 EPKKLLRRQD 1236 (1255)
Q Consensus 1227 ~~~eLl~~~~ 1236 (1255)
+++++.+.+.
T Consensus 231 ~~~~~~~~~~ 240 (253)
T PRK14242 231 PTEQIFTRPR 240 (253)
T ss_pred CHHHHHcCCC
Confidence 9999986543
No 160
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.5e-41 Score=360.54 Aligned_cols=199 Identities=24% Similarity=0.422 Sum_probs=180.3
Q ss_pred EEEEEEEEEeCCCC---CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcc
Q 000845 1004 VEIYDLQIRYRPNA---PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~---~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~ 1080 (1255)
|+++||+++|++.. +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999996542 3699999999999999999999999999999999999999999999999 6
Q ss_pred cEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1081 LGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1081 i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
|+|+||+|.+|++|+++|+.+.....+++..+ +++.+++.+++..+|.|+++.+.+.+.+||+|||||++||||
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~lara 141 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEK------VIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARA 141 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHH------HHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHH
Confidence 99999999999999999998754555555655 788889999999999999999999999999999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHH-HHHHHc-CCcEEEEeccCchhhhhcCEEEEEeCCE
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQN-TIRREF-ANCTVITVAHRIATVMDCNMVLSMSDGK 1221 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~-~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1221 (1255)
++++|+++||||||++||+++.+.+.+ .+++.. +++|||++||+++.+..||+|++|++|+
T Consensus 142 l~~~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 142 VYSDADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999999999888876 566553 4689999999999998899999999985
No 161
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=5.7e-41 Score=370.96 Aligned_cols=216 Identities=26% Similarity=0.427 Sum_probs=181.1
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh-hcccE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL-RSNLG 1082 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l-R~~i~ 1082 (1255)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |.+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999953 459999999999999999999999999999999999999999999999999988876654 57899
Q ss_pred EEccCCccCCC-chhhhcccCCC-C------------ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLSQ-F------------TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~~-~------------sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
|+||+|.+|.+ |+++|+..... . ..++.. ....+.++.+ |++.........||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~--~l~~~~~~~~~~LS 145 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREAR-----------ERAEELLERV--GLADLADRPAGELS 145 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHH-----------HHHHHHHHHc--CccchhhCChhhCC
Confidence 99999999987 99999964211 0 011111 1122333332 44444445556899
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
||||||++||||++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 146 gG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~ 225 (236)
T cd03219 146 YGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEG 225 (236)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeec
Confidence 999999999999999999999999999999999999999998765 57899999999999976 9999999999999999
Q ss_pred ChhHHhhc
Q 000845 1227 EPKKLLRR 1234 (1255)
Q Consensus 1227 ~~~eLl~~ 1234 (1255)
+++++..+
T Consensus 226 ~~~~~~~~ 233 (236)
T cd03219 226 TPDEVRNN 233 (236)
T ss_pred CHHHhccC
Confidence 99998754
No 162
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-41 Score=369.44 Aligned_cols=214 Identities=26% Similarity=0.444 Sum_probs=181.9
Q ss_pred EEEEEEEEEeCCC--CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH---hh
Q 000845 1004 VEIYDLQIRYRPN--APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD---LR 1078 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~--~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~---lR 1078 (1255)
|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 6899999999642 126999999999999999999999999999999999999999999999999998776543 47
Q ss_pred cccEEEccCCccCC-CchhhhcccC---CCCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1079 SNLGIIPQDPTLFS-GSVRYNLDPL---SQFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1079 ~~i~~vpQdp~Lf~-gTIr~Nl~~~---~~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
+.++|+||+|.+|. .|+++|+... ...+. +++.+ +++..++.+.... ...+||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~-----------~~~~LS~G 144 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLE------LLELVGLEDKADA-----------YPAQLSGG 144 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHH------HHHHCCChhhhhc-----------ChhhCCHH
Confidence 89999999999997 5999999632 11221 22333 5666666544333 33579999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcC
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1227 (1255)
||||++||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 145 ~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 224 (233)
T cd03258 145 QKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGT 224 (233)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999999999999988643 7899999999999876 99999999999999999
Q ss_pred hhHHhhc
Q 000845 1228 PKKLLRR 1234 (1255)
Q Consensus 1228 ~~eLl~~ 1234 (1255)
++++.++
T Consensus 225 ~~~~~~~ 231 (233)
T cd03258 225 VEEVFAN 231 (233)
T ss_pred HHHHhcC
Confidence 9988754
No 163
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-41 Score=378.74 Aligned_cols=218 Identities=24% Similarity=0.393 Sum_probs=182.1
Q ss_pred EEEEEEEEEeCCCC---CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCC----CChHH
Q 000845 1004 VEIYDLQIRYRPNA---PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITT----IGLYD 1076 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~---~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~----i~~~~ 1076 (1255)
|+++||+++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999996432 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred hhcccEEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHH-HHHHhhhcCccchhcCCCCCCChh
Q 000845 1077 LRSNLGIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLR-EVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1077 lR~~i~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~-~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
+|++++||+|+| .+|..|+.+|+.+.. ..+.+++.+ ...++++.+++. ++ ......+||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~L~~~~-----------~~~~~~~LSgG 148 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK--IAAEKLEMVGLADEF-----------WEKSPFELSGG 148 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH--HHHHHHHHcCCChhh-----------ccCCcccCCHH
Confidence 899999999998 789999999997431 122332211 001255555552 22 22344689999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcCh
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1228 (1255)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|++
T Consensus 149 qkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~ 228 (288)
T PRK13643 149 QMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTP 228 (288)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999998764 47899999999998865 999999999999999999
Q ss_pred hHHhhc
Q 000845 1229 KKLLRR 1234 (1255)
Q Consensus 1229 ~eLl~~ 1234 (1255)
+++..+
T Consensus 229 ~~~~~~ 234 (288)
T PRK13643 229 SDVFQE 234 (288)
T ss_pred HHHHcC
Confidence 998753
No 164
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6.5e-41 Score=387.02 Aligned_cols=223 Identities=26% Similarity=0.390 Sum_probs=189.6
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCC--CEEEEcCEeCCCCChHHhh
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTG--GKIIIDGLDITTIGLYDLR 1078 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~--G~I~idG~di~~i~~~~lR 1078 (1255)
.|.|+++||+++|+. ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++...+.. +
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~--~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH--K 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH--H
Confidence 478999999999963 469999999999999999999999999999999999999999 9999999999876653 6
Q ss_pred cccEEEccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1079 SNLGIIPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1079 ~~i~~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
++|+||+|++.+|.. |+++|+.+.- ..+.+++.+ ...++++.++|.++..+.| .+||||||||
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~--~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QR 145 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE--RVADALKLVGLGDAAAHLP-----------AQLSGGMQQR 145 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHhcCCCchhhCCh-----------hhCCHHHHHH
Confidence 789999999999976 9999997421 223333221 0112666666665544443 4799999999
Q ss_pred HHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC---CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1155 IGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA---NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1155 l~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~---~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
++|||||+++|++|+||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|++++.|+|++
T Consensus 146 vaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~ 225 (362)
T TIGR03258 146 IAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQA 225 (362)
T ss_pred HHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999999999987654 6899999999999866 99999999999999999999
Q ss_pred HhhcCChHHH
Q 000845 1231 LLRRQDSLFA 1240 (1255)
Q Consensus 1231 Ll~~~~~~f~ 1240 (1255)
+.+++...|-
T Consensus 226 ~~~~p~~~~~ 235 (362)
T TIGR03258 226 LYDAPADGFA 235 (362)
T ss_pred HHhCcCcHHH
Confidence 9988766553
No 165
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-41 Score=370.97 Aligned_cols=221 Identities=27% Similarity=0.437 Sum_probs=183.3
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999642 459999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EccCCccCC-CchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1084 IPQDPTLFS-GSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1084 vpQdp~Lf~-gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
+||+|.+|. .|+++|+.... ..+.++..+ ...++++..++.+ +........+||||||||++|||
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lar 148 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIRE--RADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVAR 148 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHH
Confidence 999999996 69999996421 111111111 0011444444432 01233445689999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcCC
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQD 1236 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~ 1236 (1255)
|++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 149 al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 228 (242)
T cd03295 149 ALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPA 228 (242)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCC
Confidence 99999999999999999999999999999998653 7899999999998765 99999999999999999999876543
No 166
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=376.41 Aligned_cols=219 Identities=26% Similarity=0.432 Sum_probs=182.6
Q ss_pred eEEEEEEEEEeCCCC---CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC----hH
Q 000845 1003 KVEIYDLQIRYRPNA---PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG----LY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~---~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~----~~ 1075 (1255)
.|+++||+++|+.+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996432 36999999999999999999999999999999999999999999999999997543 45
Q ss_pred HhhcccEEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccc-hhcCCCCCCCh
Q 000845 1076 DLRSNLGIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDS-LVVQDGANWSM 1149 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt-~v~e~G~~LSg 1149 (1255)
.+|++|+||||+| .+|..|+++|+.+.. ..+.++..+. ..++++.+ ||++ .......+|||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~--~~~~l~~~-----------gL~~~~~~~~~~~LSg 148 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY--AHRLLMDL-----------GFSRDVMSQSPFQMSG 148 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH--HHHHHHHc-----------CCChhhhhCCcccCCH
Confidence 7899999999998 588899999996421 1233332220 01133333 4542 23445678999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|
T Consensus 149 Gq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g 228 (286)
T PRK13646 149 GQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQT 228 (286)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999999999999864 47899999999999865 8999999999999999
Q ss_pred ChhHHhhc
Q 000845 1227 EPKKLLRR 1234 (1255)
Q Consensus 1227 ~~~eLl~~ 1234 (1255)
+++++.++
T Consensus 229 ~~~~~~~~ 236 (286)
T PRK13646 229 SPKELFKD 236 (286)
T ss_pred CHHHHHhC
Confidence 99998764
No 167
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=372.50 Aligned_cols=222 Identities=23% Similarity=0.367 Sum_probs=188.3
Q ss_pred CCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCC--C
Q 000845 1000 PTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITT--I 1072 (1255)
Q Consensus 1000 ~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~--i 1072 (1255)
..+.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3468999999999963 4699999999999999999999999999999999999975 89999999999875 3
Q ss_pred ChHHhhcccEEEccCCccCCCchhhhcccCC---CC--Ch----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCC
Q 000845 1073 GLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS---QF--TD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQD 1143 (1255)
Q Consensus 1073 ~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~--sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~ 1143 (1255)
+...+|++++|+||+|.+|.+|+++|+.... .. +. +++.+ +++.+++.+.+.. .....
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~-------~~~~~ 160 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVET------SLRKAGLWEEVKD-------RLHEP 160 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHH------HHHHcCCchhhhH-------HhhCC
Confidence 4567889999999999999999999997421 11 11 22333 6777776544321 22344
Q ss_pred CCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEE
Q 000845 1144 GANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKL 1222 (1255)
Q Consensus 1144 G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1222 (1255)
..+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++
T Consensus 161 ~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i 240 (267)
T PRK14235 161 GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNL 240 (267)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEE
Confidence 5689999999999999999999999999999999999999999999987667899999999999966 899999999999
Q ss_pred EEEcChhHHhhcCC
Q 000845 1223 VEYDEPKKLLRRQD 1236 (1255)
Q Consensus 1223 ve~G~~~eLl~~~~ 1236 (1255)
++.|+++++..++.
T Consensus 241 ~~~g~~~~~~~~~~ 254 (267)
T PRK14235 241 VEVGDTEKMFTNPD 254 (267)
T ss_pred EEeCCHHHHHhCCC
Confidence 99999999986543
No 168
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9e-41 Score=365.89 Aligned_cols=216 Identities=24% Similarity=0.380 Sum_probs=178.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh-hcccE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL-RSNLG 1082 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l-R~~i~ 1082 (1255)
|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999953 369999999999999999999999999999999999999999999999999988877654 67899
Q ss_pred EEccCCccCCC-chhhhcccCCCCC-hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLSQFT-DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~~~s-d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
|+||++.+|.+ |+++|+.+..... ..+..+. ..++++.. . +++........+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~--~~~~l~~~------~----~l~~~~~~~~~~LS~G~~qrv~lara 146 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKAR--LERVYELF------P----RLKERRKQLAGTLSGGEQQMLAIARA 146 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHH--HHHHHHHH------H----hhhhhhhCchhhCCHHHHHHHHHHHH
Confidence 99999999987 9999997432211 1111110 00122222 1 12223334456799999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhh
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLR 1233 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~ 1233 (1255)
++++|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 147 LMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred HhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 999999999999999999999999999998765 47899999999999866 99999999999999999988754
No 169
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=371.76 Aligned_cols=222 Identities=22% Similarity=0.423 Sum_probs=187.1
Q ss_pred CCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCC--C
Q 000845 1000 PTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITT--I 1072 (1255)
Q Consensus 1000 ~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~--i 1072 (1255)
....|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 10 ~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~ 87 (269)
T PRK14259 10 KNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRV 87 (269)
T ss_pred CCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccC
Confidence 3457999999999963 459999999999999999999999999999999999987 689999999999863 5
Q ss_pred ChHHhhcccEEEccCCccCCCchhhhcccCCC---CC---hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1073 GLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQ---FT---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1073 ~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~---~s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
+...+|++++|+||+|.+|..|+++|+.+... .. ++++.+ +++.+++...+ +........+
T Consensus 88 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~l-------~~~~~~~~~~ 154 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVER------SLRKAAVWDEC-------KDKLNESGYS 154 (269)
T ss_pred CHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHH------HHHHhCCcchh-------hhhhCCCccc
Confidence 66778899999999999999999999975321 11 122333 56666654322 2223344568
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeC------
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSD------ 1219 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~------ 1219 (1255)
||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++
T Consensus 155 LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~ 234 (269)
T PRK14259 155 LSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGG 234 (269)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccc
Confidence 9999999999999999999999999999999999999999999988667899999999999866 999999996
Q ss_pred -----CEEEEEcChhHHhhcCC
Q 000845 1220 -----GKLVEYDEPKKLLRRQD 1236 (1255)
Q Consensus 1220 -----G~ive~G~~~eLl~~~~ 1236 (1255)
|+++|.|+++++...+.
T Consensus 235 ~~g~~g~~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 235 SGGKVGYLVEFNETKKIFNSPK 256 (269)
T ss_pred cccccceEEEeCCHHHHHhCcC
Confidence 67999999999987644
No 170
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=8.8e-41 Score=371.17 Aligned_cols=211 Identities=27% Similarity=0.425 Sum_probs=178.9
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh---HHhhcc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL---YDLRSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~---~~lR~~ 1080 (1255)
|+++||+++|+. .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ..+|++
T Consensus 2 l~~~~l~~~~~~-~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPN-GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCC-CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 689999999962 3469999999999999999999999999999999999999999999999999987664 346889
Q ss_pred cEEEccCCccCC-CchhhhcccCCC------------CCh---HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCC
Q 000845 1081 LGIIPQDPTLFS-GSVRYNLDPLSQ------------FTD---QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDG 1144 (1255)
Q Consensus 1081 i~~vpQdp~Lf~-gTIr~Nl~~~~~------------~sd---~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G 1144 (1255)
++|+||++.+|. .|+++|+..... ..+ +++.+ +++.+++.+. .....
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~-----------~~~~~ 143 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALS------ALERVGLADK-----------AYQRA 143 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHH------HHHHcCcHhh-----------hcCCc
Confidence 999999999887 599999963210 011 12222 4555555433 33345
Q ss_pred CCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCE
Q 000845 1145 ANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGK 1221 (1255)
Q Consensus 1145 ~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1221 (1255)
.+||||||||++||||++++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~ 223 (243)
T TIGR02315 144 DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGE 223 (243)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCE
Confidence 6899999999999999999999999999999999999999999998864 37899999999999865 99999999999
Q ss_pred EEEEcChhHHh
Q 000845 1222 LVEYDEPKKLL 1232 (1255)
Q Consensus 1222 ive~G~~~eLl 1232 (1255)
+++.|+++++.
T Consensus 224 i~~~~~~~~~~ 234 (243)
T TIGR02315 224 IVFDGAPSELD 234 (243)
T ss_pred EEecCCHHHhC
Confidence 99999999873
No 171
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.8e-40 Score=384.58 Aligned_cols=221 Identities=24% Similarity=0.383 Sum_probs=190.4
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
..++++|++++|.. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++..++.+ +++|
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999953 4599999999999999999999999999999999999999999999999999887764 5789
Q ss_pred EEEccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
+||+|++.+|+. |+++|+.+.- ..+.+++.+ ...++++.+++.++....| .+||||||||++|
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaL 155 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP--RVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAI 155 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH--HHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHH
Confidence 999999999976 9999997421 123332211 0112677778777666555 4799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||+++|++||||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+|++++++
T Consensus 156 ARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 156 ARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999999988754 7899999999999865 999999999999999999999988
Q ss_pred CChHH
Q 000845 1235 QDSLF 1239 (1255)
Q Consensus 1235 ~~~~f 1239 (1255)
+...|
T Consensus 236 p~~~~ 240 (375)
T PRK09452 236 PKNLF 240 (375)
T ss_pred cccHH
Confidence 76555
No 172
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-41 Score=364.12 Aligned_cols=202 Identities=28% Similarity=0.421 Sum_probs=171.8
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++++.+. .+++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 478999999953 469999999999999999999999999999999999999999999999999986543 4778999
Q ss_pred EccCCccCC-CchhhhcccCC---CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFS-GSVRYNLDPLS---QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~-gTIr~Nl~~~~---~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||+|.+|. .|+++|+.... ..+. +++.+ +++..++.++.... ..+||||||||+
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~-----------~~~LSgG~~qrl 139 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRE------LLELVGLEGLLNRY-----------PHELSGGQQQRV 139 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHH------HHHHcCChhhhhcC-----------hhhCCHHHHHHH
Confidence 999999886 59999996421 1121 12222 56666665544332 357999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
+|||||+++|++|||||||++||+++.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 140 ~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 140 ALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999998864 37899999999999866 9999999999999875
No 173
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=376.42 Aligned_cols=218 Identities=27% Similarity=0.473 Sum_probs=184.8
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCC--CCChHHhhcc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDIT--TIGLYDLRSN 1080 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~--~i~~~~lR~~ 1080 (1255)
-|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|++
T Consensus 5 ~l~~~~l~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSD-GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 5899999999963 346999999999999999999999999999999999999999999999999984 3445678899
Q ss_pred cEEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1081 LGIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1081 i~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
++|+||+| .+|+.|+++|+.... ..+.++..+ ...++++.+++.++. .....+||||||||+
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl 150 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRK--RVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRV 150 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHH--HHHHHHHHCCChhhh-----------hCCcccCCHHHHHHH
Confidence 99999998 578899999997421 223332221 011266777765443 233468999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
+|||||+.+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||||++|++|++++.|++++++
T Consensus 151 ~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 151 AIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999988754 7899999999999975 9999999999999999999987
Q ss_pred hc
Q 000845 1233 RR 1234 (1255)
Q Consensus 1233 ~~ 1234 (1255)
+.
T Consensus 231 ~~ 232 (283)
T PRK13636 231 AE 232 (283)
T ss_pred cC
Confidence 63
No 174
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=371.54 Aligned_cols=226 Identities=23% Similarity=0.361 Sum_probs=186.2
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCC--CCChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDIT--TIGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~--~i~~~ 1075 (1255)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999953 4599999999999999999999999999999999999987 4999999999997 45566
Q ss_pred HhhcccEEEccCCccCCC-chhhhcccCC---CC--ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCCh
Q 000845 1076 DLRSNLGIIPQDPTLFSG-SVRYNLDPLS---QF--TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSM 1149 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~g-TIr~Nl~~~~---~~--sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1149 (1255)
.+|++++|+||+|.+|.+ |+++|+.... .. ..++..+ ...++++..++.+.+. ........+|||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 152 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDE--RVEWALKKAALWDEVK-------DRLNDYPSNLSG 152 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHH--HHHHHHHHcCCccchh-------hhhccChhhCCH
Confidence 788999999999999976 9999996421 11 1121111 0012566666543322 122334568999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcCh
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1228 (1255)
|||||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 153 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 232 (253)
T PRK14267 153 GQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPT 232 (253)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987677999999999999876 999999999999999999
Q ss_pred hHHhhcCChHH
Q 000845 1229 KKLLRRQDSLF 1239 (1255)
Q Consensus 1229 ~eLl~~~~~~f 1239 (1255)
+++.+++...+
T Consensus 233 ~~~~~~~~~~~ 243 (253)
T PRK14267 233 RKVFENPEHEL 243 (253)
T ss_pred HHHHhCCCcHH
Confidence 99986643334
No 175
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=387.73 Aligned_cols=221 Identities=24% Similarity=0.353 Sum_probs=186.2
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++|++++|.. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. +++|+
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999953 4599999999999999999999999999999999999999999999999999876653 57899
Q ss_pred EEccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
||||++.+|.. |+++|+.+.. ..+.++..+ ...++++.+++.++....| .+||||||||++||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~--~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLA 145 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ--RVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIG 145 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH--HHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHH
Confidence 99999999975 9999997431 122222111 0012677777655543333 47999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcC
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
|||+++|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++
T Consensus 146 raL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p 225 (369)
T PRK11000 146 RTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYP 225 (369)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 999999999999999999999999999999988643 7899999999998866 9999999999999999999999876
Q ss_pred ChHHH
Q 000845 1236 DSLFA 1240 (1255)
Q Consensus 1236 ~~~f~ 1240 (1255)
...|-
T Consensus 226 ~~~~~ 230 (369)
T PRK11000 226 ANRFV 230 (369)
T ss_pred ccHHH
Confidence 65443
No 176
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.9e-40 Score=380.13 Aligned_cols=227 Identities=24% Similarity=0.374 Sum_probs=188.5
Q ss_pred eEEEEEEEEEeCCC-----------CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCC
Q 000845 1003 KVEIYDLQIRYRPN-----------APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITT 1071 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~-----------~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~ 1071 (1255)
-++++|++++|... ...+++|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 58999999999531 2469999999999999999999999999999999999999999999999999998
Q ss_pred CChHH---hhcccEEEccCC--ccC-CCchhhhccc----CC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchh
Q 000845 1072 IGLYD---LRSNLGIIPQDP--TLF-SGSVRYNLDP----LS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLV 1140 (1255)
Q Consensus 1072 i~~~~---lR~~i~~vpQdp--~Lf-~gTIr~Nl~~----~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v 1140 (1255)
++... +|++|+||+|+| .+| ..||.+|+.. +. ..+.++..+ ...++++.+++.+. ..
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~--~~~~~l~~vgl~~~----------~~ 155 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKD--RVKAMMLKVGLLPN----------LI 155 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHH--HHHHHHHHcCCChH----------Hh
Confidence 87554 678999999999 477 4799999852 11 234333322 01125666666221 12
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEE
Q 000845 1141 VQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSM 1217 (1255)
Q Consensus 1141 ~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl 1217 (1255)
.....+||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||
T Consensus 156 ~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl 235 (331)
T PRK15079 156 NRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVM 235 (331)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 233457999999999999999999999999999999999999999999987653 7899999999999986 9999999
Q ss_pred eCCEEEEEcChhHHhhcCChHHHH
Q 000845 1218 SDGKLVEYDEPKKLLRRQDSLFAQ 1241 (1255)
Q Consensus 1218 ~~G~ive~G~~~eLl~~~~~~f~~ 1241 (1255)
++|+|+|.|+++++++++...|.+
T Consensus 236 ~~G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 236 YLGHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred ECCEEEEEcCHHHHHcCCCCHHHH
Confidence 999999999999999876666655
No 177
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=366.28 Aligned_cols=208 Identities=23% Similarity=0.344 Sum_probs=176.9
Q ss_pred eEEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH---h
Q 000845 1003 KVEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD---L 1077 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~---l 1077 (1255)
-++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999996432 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cccEEEccCCccCCC-chhhhcccC---CCCChH----HHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1078 R-SNLGIIPQDPTLFSG-SVRYNLDPL---SQFTDQ----EIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1078 R-~~i~~vpQdp~Lf~g-TIr~Nl~~~---~~~sd~----ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
| +.++|+||+|.+|.+ |+++|+... .....+ ++.+ +++..++.+. ......+||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~gl~~~-----------~~~~~~~LS 147 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALE------MLAAVGLEHR-----------ANHRPSELS 147 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHH------HHHHcCCchh-----------hhCChhhCC
Confidence 3 679999999999976 999999641 122222 2222 5565555433 333346799
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhhcCEEEEEeCCEEEEEc
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMDCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1226 (1255)
||||||++||||++.+|+||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+..+|++++|++|+|++.|
T Consensus 148 gG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~ 227 (233)
T PRK11629 148 GGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAEL 227 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEe
Confidence 999999999999999999999999999999999999999998864 478999999999999999999999999999887
Q ss_pred C
Q 000845 1227 E 1227 (1255)
Q Consensus 1227 ~ 1227 (1255)
+
T Consensus 228 ~ 228 (233)
T PRK11629 228 S 228 (233)
T ss_pred c
Confidence 6
No 178
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=369.31 Aligned_cols=222 Identities=24% Similarity=0.394 Sum_probs=187.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCCCChHHh
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITTIGLYDL 1077 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~i~~~~l 1077 (1255)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999963 4599999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcccEEEccCCccC-CCchhhhcccCC---CC--C----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1078 RSNLGIIPQDPTLF-SGSVRYNLDPLS---QF--T----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1078 R~~i~~vpQdp~Lf-~gTIr~Nl~~~~---~~--s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
|+.|+|+||+|.+| ..|+++|+.... .. . ++++.+ +++.+++.+.+. ..+|. ...+|
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~---~~~~~----~~~~L 147 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRW------ALEKAQLWDEVK---DRLDA----PAGKL 147 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHH------HHHHcCCCcchh---hhhcC----CcccC
Confidence 99999999999755 579999996421 11 1 122333 677776644322 12333 34579
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||||||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 SgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 227 (250)
T PRK14247 148 SGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWG 227 (250)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEEC
Confidence 999999999999999999999999999999999999999999987678999999999999865 9999999999999999
Q ss_pred ChhHHhhcCChHH
Q 000845 1227 EPKKLLRRQDSLF 1239 (1255)
Q Consensus 1227 ~~~eLl~~~~~~f 1239 (1255)
+++++.+.+...+
T Consensus 228 ~~~~~~~~~~~~~ 240 (250)
T PRK14247 228 PTREVFTNPRHEL 240 (250)
T ss_pred CHHHHHcCCccHH
Confidence 9999987654334
No 179
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=372.64 Aligned_cols=219 Identities=23% Similarity=0.446 Sum_probs=186.6
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++|++++|+.+.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 58999999999644456999999999999999999999999999999999999999999999999998888788899999
Q ss_pred EEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1083 IIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1083 ~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
|+||+| .++..|+++|+.... ..+.++..+ ...++++..++.++... ...+||||||||++|
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 153 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD--IIDDLAKKVGMEDYLDK-----------EPQNLSGGQKQRVAI 153 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH--HHHHHHHHcCCHHHhhC-----------CcccCCHHHHHHHHH
Confidence 999998 455779999997421 123333221 00125666666555433 335899999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 154 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 154 ASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999999999998653 4899999999999888999999999999999999998764
No 180
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.6e-40 Score=386.62 Aligned_cols=213 Identities=25% Similarity=0.443 Sum_probs=187.6
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.++++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+++...+|++|+
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999953 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCcc-CCCchhhhcccCC-----CC---C---hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1083 IIPQDPTL-FSGSVRYNLDPLS-----QF---T---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1083 ~vpQdp~L-f~gTIr~Nl~~~~-----~~---s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
|+||++.+ |+.|+++|+.... .. . .+.+.+ +++.+++.++..+ ...+||||
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~------~le~vgl~~~~~~-----------~~~~LSgG 143 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVER------AMERTGVAQFADR-----------PVTSLSGG 143 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHH------HHHHcCCchhhcC-----------ChhhCCHH
Confidence 99999987 6779999996421 11 1 123343 7888888665433 23579999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcCh
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1228 (1255)
||||++|||||+++|+||||||||++||+.+...+.+.|++.. .++|+|+++|+++.+.. ||||++|++|++++.|+|
T Consensus 144 erQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~ 223 (402)
T PRK09536 144 ERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPP 223 (402)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCH
Confidence 9999999999999999999999999999999999999999875 47899999999999965 999999999999999999
Q ss_pred hHHhhc
Q 000845 1229 KKLLRR 1234 (1255)
Q Consensus 1229 ~eLl~~ 1234 (1255)
++++..
T Consensus 224 ~ev~~~ 229 (402)
T PRK09536 224 ADVLTA 229 (402)
T ss_pred HHHhCc
Confidence 998864
No 181
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-40 Score=374.16 Aligned_cols=218 Identities=24% Similarity=0.381 Sum_probs=184.2
Q ss_pred EEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh----hcc
Q 000845 1005 EIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL----RSN 1080 (1255)
Q Consensus 1005 ~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l----R~~ 1080 (1255)
.++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 46688888853 469999999999999999999999999999999999999999999999999988776543 468
Q ss_pred cEEEccCCccCC-CchhhhcccC---CCCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1081 LGIIPQDPTLFS-GSVRYNLDPL---SQFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1081 i~~vpQdp~Lf~-gTIr~Nl~~~---~~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
++|+||++.+|. .|+++|+... ..... +++.+ +++.+++.++....| .+||||||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LS~Gq~ 166 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAE------ALELVGLEGWEHKYP-----------DELSGGMQ 166 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHH------HHHHcCCHhHhhCCc-----------ccCCHHHH
Confidence 999999999985 6999999642 11122 22333 677777766655443 47999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChh
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPK 1229 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1229 (1255)
||++||||++++|+||||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 167 qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 246 (269)
T cd03294 167 QRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPE 246 (269)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998864 37899999999999865 9999999999999999999
Q ss_pred HHhhcCChHHHH
Q 000845 1230 KLLRRQDSLFAQ 1241 (1255)
Q Consensus 1230 eLl~~~~~~f~~ 1241 (1255)
++++++...|.+
T Consensus 247 ~~~~~~~~~~~~ 258 (269)
T cd03294 247 EILTNPANDYVR 258 (269)
T ss_pred HHHhCcCcHHHH
Confidence 998765554443
No 182
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=376.62 Aligned_cols=220 Identities=23% Similarity=0.377 Sum_probs=183.0
Q ss_pred eEEEEEEEEEeCCCC---CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCC----CChH
Q 000845 1003 KVEIYDLQIRYRPNA---PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITT----IGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~---~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~----i~~~ 1075 (1255)
.++++||+++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996432 459999999999999999999999999999999999999999999999999863 3456
Q ss_pred HhhcccEEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1076 DLRSNLGIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
..|++|+||||+| .+|+.|+++|+.+.. ..+.++..+ ...++++.++|.+.+ .......||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~--~~~~~l~~~gL~~~~----------~~~~~~~LSgG 149 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ--KAREMIELVGLPEEL----------LARSPFELSGG 149 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHCCCChhh----------hhCCcccCCHH
Confidence 7888999999998 688899999996421 123333321 011256666654221 12334679999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcC
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1227 (1255)
||||++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|+
T Consensus 150 q~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~ 229 (290)
T PRK13634 150 QMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGT 229 (290)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999988643 7899999999999865 99999999999999999
Q ss_pred hhHHhhc
Q 000845 1228 PKKLLRR 1234 (1255)
Q Consensus 1228 ~~eLl~~ 1234 (1255)
++++.+.
T Consensus 230 ~~~~~~~ 236 (290)
T PRK13634 230 PREIFAD 236 (290)
T ss_pred HHHHhcC
Confidence 9998754
No 183
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4e-40 Score=363.58 Aligned_cols=215 Identities=25% Similarity=0.373 Sum_probs=179.8
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... +++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 689999999953 46999999999999999999999999999999999999999999999999998776543 468999
Q ss_pred EccCCcc-CCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1084 IPQDPTL-FSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1084 vpQdp~L-f~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
+||++.+ +..|+++|+.... ..+.++..+ ...+.++.. |++........+||||||||++|||
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~-----------gl~~~~~~~~~~LS~G~~qrl~lar 145 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE--RIAALLARL-----------GLAERADDKVRELNGGHRRRVEIAR 145 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHc-----------CChhhhcCChhhCCHHHHHHHHHHH
Confidence 9999987 4679999997432 122211111 000133333 3443344455689999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|++++|+||||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 146 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 146 ALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred HHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999875 37899999999999988999999999999999999999864
No 184
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.6e-40 Score=378.25 Aligned_cols=217 Identities=24% Similarity=0.426 Sum_probs=183.5
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
..|+++||+++|+. ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++|
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999953 46999999999999999999999999999999999999999999999999997754 4578999
Q ss_pred EEEccCCccCC-CchhhhcccCCC---CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1082 GIIPQDPTLFS-GSVRYNLDPLSQ---FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1082 ~~vpQdp~Lf~-gTIr~Nl~~~~~---~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
+|+||+|.+|. .|++||+.++.. .+..+..+ ...++++.+++.+ ..++.+ .+||+|||||++|
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~-------~~~~~~----~~LS~G~~qrl~l 149 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARA--LVPPLLEFAKLEN-------KADAKV----GELSGGMKRRLTL 149 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCCch-------HhcCch----hhCCHHHHHHHHH
Confidence 99999999986 599999974321 22222211 0012455555433 334444 4799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||+++|++|+|||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 150 a~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 150 ARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 999999999999999999999999999999999875 47899999999999976 999999999999999999999764
No 185
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=372.97 Aligned_cols=219 Identities=22% Similarity=0.394 Sum_probs=188.5
Q ss_pred eEEEEEEEEEeCCC-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1003 KVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
-|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999642 34599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1082 GIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1082 ~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
+|+||+| .++..|+.+|+.... ..+++++.+ ....+++.+++.++.... ...||||||||++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ 150 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIK--RVDEALLAVNMLDFKTRE-----------PARLSGGQKQRVA 150 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHH--HHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHH
Confidence 9999998 467889999997421 233333322 012367777776654432 3579999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 151 lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 151 VAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999987754 7899999999999988999999999999999999998864
No 186
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2e-40 Score=349.13 Aligned_cols=178 Identities=30% Similarity=0.539 Sum_probs=165.5
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+...+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|+.++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999965434699999999999999999999999999999999999999999999999998776 6678899999
Q ss_pred EccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHcc
Q 000845 1084 IPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLR 1163 (1255)
Q Consensus 1084 vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~ 1163 (1255)
+||+|.+|+.|+++|+ ..+||+|||||++||||+++
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------------~~~LS~G~~qrv~laral~~ 115 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------------GRRFSGGERQRLALARILLQ 115 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------------cccCCHHHHHHHHHHHHHhc
Confidence 9999999999999886 34799999999999999999
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCEEEEEc
Q 000845 1164 RRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1164 ~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1226 (1255)
+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 116 ~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 116 DAPIVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999999887789999999999999889999999999999865
No 187
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=375.96 Aligned_cols=218 Identities=21% Similarity=0.310 Sum_probs=181.3
Q ss_pred EEEEEEEEEeCCCC---CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCC---------
Q 000845 1004 VEIYDLQIRYRPNA---PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITT--------- 1071 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~---~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~--------- 1071 (1255)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 88999999996432 259999999999999999999999999999999999999999999999987632
Q ss_pred ---------------CChHHhhcccEEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHH-HHHH
Q 000845 1072 ---------------IGLYDLRSNLGIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLR-EVIQ 1130 (1255)
Q Consensus 1072 ---------------i~~~~lR~~i~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~-~~i~ 1130 (1255)
.+...+|++|+||||+| .+|..|+++||.+.. ..+.+++.+ ...++++.++|. ++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~--~~~~~l~~~gL~~~~~- 159 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKK--RAAKYIELVGLDESYL- 159 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHH--HHHHHHHHcCCChhhh-
Confidence 13456789999999986 688899999997432 233333322 011256666653 332
Q ss_pred hhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhh
Q 000845 1131 EKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVM 1209 (1255)
Q Consensus 1131 ~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~ 1209 (1255)
.....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.
T Consensus 160 ----------~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~ 229 (305)
T PRK13651 160 ----------QRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVL 229 (305)
T ss_pred ----------hCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHH
Confidence 23346799999999999999999999999999999999999999999998764 4789999999999885
Q ss_pred h-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1210 D-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1210 ~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
. ||||++|++|++++.|+++++.++
T Consensus 230 ~~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 230 EWTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred HhCCEEEEEECCEEEEECCHHHHhcC
Confidence 5 999999999999999999998765
No 188
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.1e-40 Score=363.90 Aligned_cols=202 Identities=25% Similarity=0.412 Sum_probs=170.3
Q ss_pred EEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH----h
Q 000845 1004 VEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD----L 1077 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~----l 1077 (1255)
|+++||+++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996421 46999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hcccEEEccCCccCCC-chhhhcccCCC---CCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCCh
Q 000845 1078 RSNLGIIPQDPTLFSG-SVRYNLDPLSQ---FTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSM 1149 (1255)
Q Consensus 1078 R~~i~~vpQdp~Lf~g-TIr~Nl~~~~~---~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1149 (1255)
|++++|+||+|.+|.+ |+++|+..... ... +++.+ +++..++.+. ......+|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~-----------~~~~~~~LS~ 143 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEE------LLERVGLGDR-----------LNHYPSELSG 143 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHH------HHHHcCCchh-----------hhcChhhcCH
Confidence 6789999999999987 99999974211 111 12222 5555555433 3334467999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhhcCEEEEEeCCEE
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMDCNMVLSMSDGKL 1222 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~i 1222 (1255)
|||||++||||++++|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 144 G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 144 GQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999999999998754 7899999999999888999999999974
No 189
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3e-40 Score=370.98 Aligned_cols=227 Identities=21% Similarity=0.306 Sum_probs=187.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChH---Hhhc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLY---DLRS 1079 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~---~lR~ 1079 (1255)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5999999999953 4699999999999999999999999999999999999999999999999999876653 3578
Q ss_pred ccEEEccCCccCCC-chhhhcccC----CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1080 NLGIIPQDPTLFSG-SVRYNLDPL----SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1080 ~i~~vpQdp~Lf~g-TIr~Nl~~~----~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
+++|+||++.+|.+ |+++|+... ...+.++..+ ...++++.+++.+... ....+||||||||
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~--~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qr 151 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHS--TVMMKLEAVGLRGAAK-----------LMPSELSGGMARR 151 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHH--HHHHHHHHcCChhhhh-----------CChhhCCHHHHHH
Confidence 89999999999986 999999631 1122211111 0011555555544322 2335799999999
Q ss_pred HHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1155 IGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1155 l~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
++||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (269)
T PRK11831 152 AALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQAL 231 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999988643 7899999999999876 999999999999999999999
Q ss_pred hhcCChHHHHHHH
Q 000845 1232 LRRQDSLFAQLVK 1244 (1255)
Q Consensus 1232 l~~~~~~f~~l~~ 1244 (1255)
.+++...+..++.
T Consensus 232 ~~~~~~~~~~~~~ 244 (269)
T PRK11831 232 QANPDPRVRQFLD 244 (269)
T ss_pred hcCCcHHHHHHHH
Confidence 8765445555554
No 190
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2e-40 Score=361.84 Aligned_cols=205 Identities=24% Similarity=0.440 Sum_probs=174.7
Q ss_pred EEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1004 VEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999996431 169999999999999999999999999999999999999999999999999976 456678999
Q ss_pred EEEccCCccCCC-chhhhcccCC---CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLS---QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~---~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
+|+||+|.+|.+ |+++|+.... ..+. +++.+ +++..++.+...+ ...+|||||||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~-----------~~~~LS~G~~q 143 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEE------LADRLGMEELLDR-----------RVGGFSTGMRQ 143 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHH------HHHHcCCHHHHhh-----------hhhhcCHHHHH
Confidence 999999999986 9999996321 1222 22333 6666666554433 34579999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|++||||++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 144 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 144 KVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999999998864 47899999999999876 8999999999998865
No 191
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3.5e-40 Score=367.84 Aligned_cols=214 Identities=25% Similarity=0.440 Sum_probs=182.0
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC----------
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG---------- 1073 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~---------- 1073 (1255)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999963 46999999999999999999999999999999999999999999999999997653
Q ss_pred ---hHHhhcccEEEccCCccCC-CchhhhcccCC----CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhc
Q 000845 1074 ---LYDLRSNLGIIPQDPTLFS-GSVRYNLDPLS----QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVV 1141 (1255)
Q Consensus 1074 ---~~~lR~~i~~vpQdp~Lf~-gTIr~Nl~~~~----~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~ 1141 (1255)
...+|+.++|+||++.+|. .|+++|+.... .... +++.+ +++..++.+...
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~------~l~~~gl~~~~~----------- 141 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAME------LLDMVGLADKAD----------- 141 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHH------HHHHcCChhHhh-----------
Confidence 2457889999999999885 79999996421 1121 22222 555555554433
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEe
Q 000845 1142 QDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMS 1218 (1255)
Q Consensus 1142 e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~ 1218 (1255)
.....||||||||++||||++++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.+ ||++++|+
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~ 221 (252)
T TIGR03005 142 HMPAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFD 221 (252)
T ss_pred cChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEE
Confidence 33467999999999999999999999999999999999999999999988653 7899999999999965 99999999
Q ss_pred CCEEEEEcChhHHhhcCC
Q 000845 1219 DGKLVEYDEPKKLLRRQD 1236 (1255)
Q Consensus 1219 ~G~ive~G~~~eLl~~~~ 1236 (1255)
+|++++.|+++++.+.+.
T Consensus 222 ~G~i~~~g~~~~~~~~~~ 239 (252)
T TIGR03005 222 KGRIVEQGKPDEIFRQPK 239 (252)
T ss_pred CCEEEEeCCHHHHhcCCC
Confidence 999999999999987654
No 192
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=370.27 Aligned_cols=221 Identities=22% Similarity=0.391 Sum_probs=185.8
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCCCC--hHH
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITTIG--LYD 1076 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~i~--~~~ 1076 (1255)
-+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999953 469999999999999999999999999999999999986 47999999999987654 345
Q ss_pred hhcccEEEccCCccCCCchhhhcccC---CCC--C----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1077 LRSNLGIIPQDPTLFSGSVRYNLDPL---SQF--T----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1077 lR~~i~~vpQdp~Lf~gTIr~Nl~~~---~~~--s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
+|++++|+||++.+|.+|+++|+... ... . ++++.+ +++..++.+.+. +.+...+.+|
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~-------~~~~~~~~~L 150 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEK------SLTSVGLWEELG-------DRLKDSAFEL 150 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHH------HHHHcCCCchhh-------hHhhcChhhC
Confidence 78899999999999999999999632 111 1 122333 566666644321 2233445689
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||||||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 151 S~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~ 230 (251)
T PRK14244 151 SGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYN 230 (251)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999988778999999999999876 9999999999999999
Q ss_pred ChhHHhhcCChHH
Q 000845 1227 EPKKLLRRQDSLF 1239 (1255)
Q Consensus 1227 ~~~eLl~~~~~~f 1239 (1255)
+++++.+.+...+
T Consensus 231 ~~~~~~~~~~~~~ 243 (251)
T PRK14244 231 TTQEIFKNPQSSK 243 (251)
T ss_pred CHHHHhcCCCChH
Confidence 9999987765544
No 193
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-40 Score=368.19 Aligned_cols=225 Identities=21% Similarity=0.372 Sum_probs=186.2
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC--C---CCCEEEEcCEeCCC--CChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE--P---TGGKIIIDGLDITT--IGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~--~---~~G~I~idG~di~~--i~~~ 1075 (1255)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999963 359999999999999999999999999999999999987 3 59999999999863 4456
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCCC----CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLSQ----FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~----~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
.+|++++|+||+|.+|.+|+++|+.+... ..+++..+ ...++++..++.+.+. ........+|||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq 160 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQE--IVEKSLKDVALWDEVK-------DRLHTQALSLSGGQ 160 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHH--HHHHHHHHcCCchhhh-------hhhhCCcccCCHHH
Confidence 78899999999999999999999964211 12222211 0012455665544332 12334556899999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 161 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 240 (259)
T PRK14274 161 QQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNK 240 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999999988778899999999999876 99999999999999999999
Q ss_pred HhhcCChH
Q 000845 1231 LLRRQDSL 1238 (1255)
Q Consensus 1231 Ll~~~~~~ 1238 (1255)
+.+++...
T Consensus 241 ~~~~~~~~ 248 (259)
T PRK14274 241 MFSNPDDQ 248 (259)
T ss_pred HhhCCCCH
Confidence 98765443
No 194
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-40 Score=368.75 Aligned_cols=220 Identities=24% Similarity=0.420 Sum_probs=187.5
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCC--CCh
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITT--IGL 1074 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~--i~~ 1074 (1255)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 36999999999953 569999999999999999999999999999999999996 589999999999864 345
Q ss_pred HHhhcccEEEccCCccCCCchhhhcccCC----CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1075 YDLRSNLGIIPQDPTLFSGSVRYNLDPLS----QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1075 ~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~----~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
..+|+.|+|+||+|.+|.+|+++|+.... ...+ +++.+ +++.+++.+.+. ...+.....
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~i~-------~~~~~~~~~ 163 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVET------SLKQAALWDQVK-------DDLHKSALT 163 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHH------HHHHcCCCchhh-------hhhcCCccc
Confidence 67789999999999999999999997421 1122 22232 566666654432 233455678
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEE
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1225 (1255)
||||||||++||||++++|++|||||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 164 LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~ 243 (267)
T PRK14237 164 LSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEY 243 (267)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999988778899999999999865 999999999999999
Q ss_pred cChhHHhhcCC
Q 000845 1226 DEPKKLLRRQD 1236 (1255)
Q Consensus 1226 G~~~eLl~~~~ 1236 (1255)
|+++++.+.+.
T Consensus 244 g~~~~~~~~~~ 254 (267)
T PRK14237 244 DKTRNIFTNPK 254 (267)
T ss_pred CCHHHHhcCCC
Confidence 99999987543
No 195
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=368.68 Aligned_cols=227 Identities=24% Similarity=0.379 Sum_probs=184.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCC--CChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITT--IGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~--i~~~ 1075 (1255)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999963 469999999999999999999999999999999999997 479999999999864 3445
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
.+|+.++|+||+|.+|++|+++|+.+.. ...+.+..+ .....+++.+++++.. +.. ......+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~~---~~~----~~~~~~~LS~Gq~ 153 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELID-QRVEESLKQAAIWKET---KDN----LDRNAQAFSGGQQ 153 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHH-HHHHHHHHHcCCCcch---HHH----hccChhhCCHHHH
Confidence 6788999999999999999999997421 111111110 0001255665553211 111 2334568999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
||++||||++++|+++||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988677899999999999876 899999999999999999999
Q ss_pred hhcCChHH
Q 000845 1232 LRRQDSLF 1239 (1255)
Q Consensus 1232 l~~~~~~f 1239 (1255)
...+.-.|
T Consensus 234 ~~~~~~~~ 241 (251)
T PRK14251 234 FIAPKKQI 241 (251)
T ss_pred HhCCCCHH
Confidence 86644333
No 196
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=367.98 Aligned_cols=220 Identities=24% Similarity=0.396 Sum_probs=184.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhcc---CCC--CCCEEEEcCEeCCCC--ChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRL---VEP--TGGKIIIDGLDITTI--GLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl---~~~--~~G~I~idG~di~~i--~~~ 1075 (1255)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999953 4599999999999999999999999999999999997 454 589999999998754 345
Q ss_pred HhhcccEEEccCCccCCCchhhhcccC-C--CCC-----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPL-S--QFT-----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~-~--~~s-----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
.+|++++|+||+|.+|.+|+++|+... . ... ++++.+ +++.+++.+.+. +.....+.+|
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~-------~~~~~~~~~L 147 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEE------TLKGAALWDEVK-------DKLKESAFAL 147 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHH------HHHHcCCCcchh-------hhhhCCcccC
Confidence 778899999999999999999999632 1 111 122333 566666544332 2233455689
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||||||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~ 227 (250)
T PRK14245 148 SGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYD 227 (250)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999999999988778999999999999865 9999999999999999
Q ss_pred ChhHHhhcCCh
Q 000845 1227 EPKKLLRRQDS 1237 (1255)
Q Consensus 1227 ~~~eLl~~~~~ 1237 (1255)
+++++.+++..
T Consensus 228 ~~~~~~~~~~~ 238 (250)
T PRK14245 228 DTKKIFTNPEK 238 (250)
T ss_pred CHHHHhcCCCC
Confidence 99999876543
No 197
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=369.10 Aligned_cols=226 Identities=20% Similarity=0.361 Sum_probs=185.8
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCCCC--hH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITTIG--LY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~i~--~~ 1075 (1255)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+ ..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 6999999999953 4599999999999999999999999999999999999985 7999999999986532 44
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
.+|+.++|+||++.+|+.|+++|+.... ..+.++..+ ...++++.+++.+.+. ..++ .....||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~---~~~~----~~~~~LSgG~~ 160 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDG--VVENALRSAALWDETS---DRLK----SPALSLSGGQQ 160 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCCCcchh---hhhc----CChhhCCHHHH
Confidence 6788999999999999999999997421 122222111 0012566666543221 1223 34467999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
||++|||||+++|+||||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999866 999999999999999999999
Q ss_pred hhcCChHH
Q 000845 1232 LRRQDSLF 1239 (1255)
Q Consensus 1232 l~~~~~~f 1239 (1255)
..++...|
T Consensus 241 ~~~~~~~~ 248 (258)
T PRK14268 241 FHNPREKS 248 (258)
T ss_pred hcCCCCHH
Confidence 87654443
No 198
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-40 Score=372.28 Aligned_cols=220 Identities=27% Similarity=0.438 Sum_probs=188.1
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCC---CEEEEcCEeCCCCChHHhh
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTG---GKIIIDGLDITTIGLYDLR 1078 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~---G~I~idG~di~~i~~~~lR 1078 (1255)
+.|+++|++++|++...++|+|+||+|++||++||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999996444469999999999999999999999999999999999999988 8999999999887777889
Q ss_pred cccEEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1079 SNLGIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1079 ~~i~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
++++|+||+| .+++.|+++|+.+.. ..+.++..+ ...++++.+++.++....| .+|||||||
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~--~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~q 150 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK--IVRDVLADVGMLDYIDSEP-----------ANLSGGQKQ 150 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH--HHHHHHHHCCChhHhcCCc-----------ccCCHHHHH
Confidence 9999999998 467889999997421 133333211 0012677777766554443 579999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHH
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eL 1231 (1255)
|++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|+++++
T Consensus 151 rv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 230 (282)
T PRK13640 151 RVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEI 230 (282)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999988753 7899999999999988999999999999999999988
Q ss_pred hhc
Q 000845 1232 LRR 1234 (1255)
Q Consensus 1232 l~~ 1234 (1255)
...
T Consensus 231 ~~~ 233 (282)
T PRK13640 231 FSK 233 (282)
T ss_pred hcC
Confidence 753
No 199
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-40 Score=376.50 Aligned_cols=228 Identities=25% Similarity=0.368 Sum_probs=186.7
Q ss_pred eEEEEEEEEEeCCC--------CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh
Q 000845 1003 KVEIYDLQIRYRPN--------APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL 1074 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~--------~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~ 1074 (1255)
-|+++|++++|+.. ...+|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 48999999999631 2469999999999999999999999999999999999999999999999999988875
Q ss_pred H---HhhcccEEEccCCc--cCCC-chhhhccc----CCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCC
Q 000845 1075 Y---DLRSNLGIIPQDPT--LFSG-SVRYNLDP----LSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDG 1144 (1255)
Q Consensus 1075 ~---~lR~~i~~vpQdp~--Lf~g-TIr~Nl~~----~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G 1144 (1255)
. .+|++|+||||+|. |++. |+.+|+.. ......++..+ ...++++.+++.+ ..++. ..
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~gL~~------~~~~~----~p 152 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERRE--KALAMMAKVGLRP------EHYDR----YP 152 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHH--HHHHHHHHCCCCh------HHhcC----CC
Confidence 4 46789999999994 5553 88888741 11122222111 0112677776642 12232 23
Q ss_pred CCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCE
Q 000845 1145 ANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGK 1221 (1255)
Q Consensus 1145 ~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1221 (1255)
..||||||||++|||||+.+|++||+||||++||..+.+.|.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ 232 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGR 232 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 57999999999999999999999999999999999999999999987643 7899999999999976 99999999999
Q ss_pred EEEEcChhHHhhcCChHHHHH
Q 000845 1222 LVEYDEPKKLLRRQDSLFAQL 1242 (1255)
Q Consensus 1222 ive~G~~~eLl~~~~~~f~~l 1242 (1255)
|+|.|+++++++++...|.+.
T Consensus 233 ive~g~~~~~~~~p~hpyt~~ 253 (327)
T PRK11308 233 CVEKGTKEQIFNNPRHPYTQA 253 (327)
T ss_pred EEEECCHHHHhcCCCCHHHHH
Confidence 999999999998766566554
No 200
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-40 Score=360.55 Aligned_cols=208 Identities=25% Similarity=0.412 Sum_probs=178.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999998763 3567889999
Q ss_pred EccCCccCCC-chhhhcccCC---CCC----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLS---QFT----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~---~~s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||++.+|.. |+++|+.... ... ++++.+ +++..++.+.....| .+||||||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LS~G~~qr~ 140 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDE------LLDFVGLLEAADRLV-----------KTYSGGMRRRL 140 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHH------HHHHcCCHHHhhCCh-----------hhCCHHHHHHH
Confidence 9999998875 9999996321 111 122333 677777765543322 47999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
+||||++.+|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 141 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 141 EIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999999999988653 6899999999999876 999999999999999998764
No 201
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=367.73 Aligned_cols=223 Identities=23% Similarity=0.373 Sum_probs=184.0
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC--C---CCCEEEEcCEeCCCC--ChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE--P---TGGKIIIDGLDITTI--GLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~--~---~~G~I~idG~di~~i--~~~ 1075 (1255)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 4899999999963 459999999999999999999999999999999999853 6 599999999998653 345
Q ss_pred HhhcccEEEccCCccCCCchhhhcccC----CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPL----SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~----~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
.+|+.++|+||+|.+|+.|+++|+... +...+++..+ ....+++.+++.+.+. +.......+|||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 153 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDE--AVEKSLKGASIWDEVK-------DRLHDSALGLSGGQ 153 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHH--HHHHHHHHcCCchhHH-------HHHhcCcccCCHHH
Confidence 678899999999999999999999632 1111111111 0012566666543332 22344556899999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|||++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 154 QQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999865 99999999999999999999
Q ss_pred HhhcCC
Q 000845 1231 LLRRQD 1236 (1255)
Q Consensus 1231 Ll~~~~ 1236 (1255)
+.+++.
T Consensus 234 ~~~~~~ 239 (252)
T PRK14239 234 MFMNPK 239 (252)
T ss_pred HHhCCC
Confidence 987654
No 202
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-40 Score=359.47 Aligned_cols=202 Identities=30% Similarity=0.456 Sum_probs=175.4
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++||+++|+. .++|+|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+|+.++|
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 578999999953 36999999999999 99999999999999999999999999999999999998776 678999999
Q ss_pred EccCCccCCC-chhhhcccC---CCCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPL---SQFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~---~~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||+|.+|.+ |+++|+... ...+. +++.+ +++.+++.+..+ +. ..+||||||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~-------~~----~~~LS~G~~qrv 139 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDE------VLELVNLGDRAK-------KK----IGSLSGGMRRRV 139 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHH------HHHHCCCHHHHh-------Cc----hhhCCHHHHHHH
Confidence 9999999986 999999642 11221 22333 677777765433 22 247999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
+||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. |||+++|++|++++.|
T Consensus 140 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 140 GIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999999999988777999999999999975 8999999999999865
No 203
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.3e-40 Score=357.29 Aligned_cols=202 Identities=26% Similarity=0.417 Sum_probs=176.0
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ..+|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999998764 567889999
Q ss_pred EccCCccCC-CchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1084 IPQDPTLFS-GSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1084 vpQdp~Lf~-gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
+||++.+|. .|+++|+.... ..+++++.+ +++..++.+..... ...||||||||++|||
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~ 139 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDE------VLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIAL 139 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHH------HHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHH
Confidence 999998884 69999996431 223445554 77888887655433 2469999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|++++|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 140 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 140 ALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred HHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998765 47899999999999976 9999999999999875
No 204
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-40 Score=371.29 Aligned_cols=218 Identities=25% Similarity=0.390 Sum_probs=185.6
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
-++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++.++
T Consensus 3 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 37899999999533 35999999999999999999999999999999999999999999999999998877788899999
Q ss_pred EEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1083 IIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1083 ~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
|+||+| .+|..|+++|+.... ..+.++..+ ...++++.+++.+.....| ..||||||||++|
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~l 148 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH--RVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAI 148 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHH--HHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHH
Confidence 999998 478889999996321 123222111 0012677777765544332 4799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||+.+|++|||||||++||+.+.+.+.+.+++..+ ++|+|++||+++.+.. ||||++|++|++++.|++++++..
T Consensus 149 araL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 149 AGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999999999999999999999999988653 7899999999999964 999999999999999999999764
No 205
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-40 Score=357.48 Aligned_cols=198 Identities=26% Similarity=0.436 Sum_probs=170.5
Q ss_pred EEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEE
Q 000845 1005 EIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGII 1084 (1255)
Q Consensus 1005 ~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~v 1084 (1255)
+++|++++|+.+ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 469999999999999999999999999999999999999999999999999864 4567889999
Q ss_pred ccCC--ccCCCchhhhcccCCC-C--ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1085 PQDP--TLFSGSVRYNLDPLSQ-F--TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1085 pQdp--~Lf~gTIr~Nl~~~~~-~--sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
||+| .+|..|+++|+..... . .++++.+ +++.+++.++..+.| ..||||||||++|||
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lar 139 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAET------VLKDLDLYALKERHP-----------LSLSGGQKQRLAIAA 139 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHH------HHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHH
Confidence 9998 4678999999975321 1 1234444 788888766544333 369999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEE
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLV 1223 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv 1223 (1255)
|++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 140 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 140 ALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999999998863 57899999999999976 9999999999985
No 206
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-40 Score=366.92 Aligned_cols=228 Identities=23% Similarity=0.395 Sum_probs=187.6
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCCC--ChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITTI--GLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~i--~~~ 1075 (1255)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999953 4699999999999999999999999999999999999974 899999999998753 345
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCC----CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLS----QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~----~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
.+|+.++|+||+|.+|..|+++|+.... ...+++..+ ...++++..++.+.+. ........+|||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 151 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDR--IVEESLKKAALWDEVK-------SELNKPGTRLSGGQ 151 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHH--HHHHHHHHcCCCchhH-------HHHhCChhhcCHHH
Confidence 6788999999999999999999997421 111222111 0012566666544332 22344557899999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (250)
T PRK14262 152 QQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTRE 231 (250)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 99999999999999999999999999999999999999987778999999999998765 99999999999999999999
Q ss_pred HhhcCChHHHH
Q 000845 1231 LLRRQDSLFAQ 1241 (1255)
Q Consensus 1231 Ll~~~~~~f~~ 1241 (1255)
+.+++...|..
T Consensus 232 ~~~~~~~~~~~ 242 (250)
T PRK14262 232 IVERPKNKLTE 242 (250)
T ss_pred HHhCCCChHHH
Confidence 98765444443
No 207
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-40 Score=365.75 Aligned_cols=222 Identities=23% Similarity=0.395 Sum_probs=185.9
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCC--CCh
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITT--IGL 1074 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~--i~~ 1074 (1255)
|.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 56999999999963 3599999999999999999999999999999999999763 69999999999875 455
Q ss_pred HHhhcccEEEccCCccCCCchhhhcccCC---CC-C----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1075 YDLRSNLGIIPQDPTLFSGSVRYNLDPLS---QF-T----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1075 ~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~-s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
..+|++++|+||+|.+|+.|+++|+.... .. + ++++.+ +++.+++.+.+. ........+
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~l~-------~~~~~~~~~ 146 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEK------SLKGAALWDEVK-------DRLKKSALG 146 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHH------HHHHcCCchhhH-------HHHhcCCCC
Confidence 67899999999999999999999996421 11 1 122222 555665543322 223344568
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEE
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1225 (1255)
||||||||++||||++.+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~ 226 (250)
T PRK14240 147 LSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEF 226 (250)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999987668899999999998876 999999999999999
Q ss_pred cChhHHhhcCChH
Q 000845 1226 DEPKKLLRRQDSL 1238 (1255)
Q Consensus 1226 G~~~eLl~~~~~~ 1238 (1255)
|+++++..++...
T Consensus 227 ~~~~~~~~~~~~~ 239 (250)
T PRK14240 227 GDTVDLFTNPKDK 239 (250)
T ss_pred CCHHHHHhCCCCh
Confidence 9999998664433
No 208
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-40 Score=382.04 Aligned_cols=222 Identities=24% Similarity=0.405 Sum_probs=187.5
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
..++++|++++|.. ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++..++. .|+.+
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 35999999999953 469999999999999999999999999999999999999999999999999987764 47789
Q ss_pred EEEccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
+||+|++.+|+. |++||+.+.- ..+.+++.+ ...++++..++.++.+..| .+||||||||++|
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~--~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaL 160 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS--RVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVAL 160 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHH
Confidence 999999999976 9999997421 223333221 0012566666655443333 4799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||+++|++|+||||||+||..+.+.+.+.|++.. .+.|+|+|||+++.+.. ||||++|++|++++.|+|+|+..+
T Consensus 161 ARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 161 ARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 999999999999999999999999999988887654 36899999999999765 999999999999999999999988
Q ss_pred CChHHH
Q 000845 1235 QDSLFA 1240 (1255)
Q Consensus 1235 ~~~~f~ 1240 (1255)
+...|.
T Consensus 241 p~~~~~ 246 (377)
T PRK11607 241 PTTRYS 246 (377)
T ss_pred CccHHH
Confidence 776554
No 209
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-40 Score=369.28 Aligned_cols=217 Identities=24% Similarity=0.427 Sum_probs=182.6
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC-hHHhhcccE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG-LYDLRSNLG 1082 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~-~~~lR~~i~ 1082 (1255)
++++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+ ...+++.++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 6899999999533 45999999999999999999999999999999999999999999999999998765 367788999
Q ss_pred EEccCCc--cCCCchhhhcccCCC---CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1083 IIPQDPT--LFSGSVRYNLDPLSQ---FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1083 ~vpQdp~--Lf~gTIr~Nl~~~~~---~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
|+||+|. ++..|+++|+..... .+.++..+ ...++++..++.+... .....||||||||++|
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~--~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~l 147 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRK--RVDRALAEIGLEKYRH-----------RSPKTLSGGQGQCVAL 147 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHH--HHHHHHHHCCCHHHhc-----------CCcccCCHHHHHHHHH
Confidence 9999985 567899999974321 22222111 0012566666654433 2335799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|||++++|+||||||||++||+.+...+.+.|++.. .++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 148 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 148 AGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998764 47899999999999988999999999999999999998754
No 210
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5.9e-40 Score=366.87 Aligned_cols=218 Identities=25% Similarity=0.398 Sum_probs=183.6
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC-------
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG------- 1073 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~------- 1073 (1255)
.+.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999963 46999999999999999999999999999999999999999999999999986431
Q ss_pred ------hHHhhcccEEEccCCccCCC-chhhhcccCC----CCChH----HHHhccCchhHHHhccHHHHHHhhhcCccc
Q 000845 1074 ------LYDLRSNLGIIPQDPTLFSG-SVRYNLDPLS----QFTDQ----EIWEVTIPSQVLEKCQLREVIQEKKEGLDS 1138 (1255)
Q Consensus 1074 ------~~~lR~~i~~vpQdp~Lf~g-TIr~Nl~~~~----~~sd~----ei~~~~~~~~al~~~~l~~~i~~lp~gldt 1138 (1255)
...+|++++|+||+|.+|.. |+++|+.... ....+ ++.+ +++..++.+...
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~------~l~~~gl~~~~~-------- 146 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVK------YLAKVGIDERAQ-------- 146 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHH------HHHHcCCChhhh--------
Confidence 34678899999999999975 9999996311 11211 2222 455555543321
Q ss_pred hhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEE
Q 000845 1139 LVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLS 1216 (1255)
Q Consensus 1139 ~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~v 1216 (1255)
......||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||||++
T Consensus 147 --~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~ 224 (257)
T PRK10619 147 --GKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIF 224 (257)
T ss_pred --hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEE
Confidence 33456899999999999999999999999999999999999999999998865 47999999999999986 899999
Q ss_pred EeCCEEEEEcChhHHhhcCC
Q 000845 1217 MSDGKLVEYDEPKKLLRRQD 1236 (1255)
Q Consensus 1217 l~~G~ive~G~~~eLl~~~~ 1236 (1255)
|++|++++.|+++++.+.+.
T Consensus 225 l~~G~i~~~~~~~~~~~~~~ 244 (257)
T PRK10619 225 LHQGKIEEEGAPEQLFGNPQ 244 (257)
T ss_pred EECCEEEEeCCHHHhhhCcc
Confidence 99999999999999986543
No 211
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-40 Score=364.96 Aligned_cols=227 Identities=22% Similarity=0.384 Sum_probs=187.2
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC--C---CCCEEEEcCEeCCCC--C
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE--P---TGGKIIIDGLDITTI--G 1073 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~--~---~~G~I~idG~di~~i--~ 1073 (1255)
.|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 367999999999963 469999999999999999999999999999999999986 3 699999999998754 3
Q ss_pred hHHhhcccEEEccCCccCC-CchhhhcccC----CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1074 LYDLRSNLGIIPQDPTLFS-GSVRYNLDPL----SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1074 ~~~lR~~i~~vpQdp~Lf~-gTIr~Nl~~~----~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
...+|++++|+||++.+|. .|+++|+... +..+.++..+ ...++++.+++.+.+.. .......+||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~-------~~~~~~~~LS 150 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADE--IVESSLKRVALWDEVKD-------RLKSNAMELS 150 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHH--HHHHHHHHcCCchhhhH-------HhhCCcCcCC
Confidence 4567899999999999998 5999999642 1112221111 00125666666543322 1223456899
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcC
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1227 (1255)
||||||++||||++++|++|||||||++||+.+.+.+.+.|++..++.|+|++||+++.+.. ||++++|++|+|++.|+
T Consensus 151 ~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 230 (252)
T PRK14256 151 GGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGE 230 (252)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999988777899999999999865 99999999999999999
Q ss_pred hhHHhhcCChH
Q 000845 1228 PKKLLRRQDSL 1238 (1255)
Q Consensus 1228 ~~eLl~~~~~~ 1238 (1255)
++++...+...
T Consensus 231 ~~~~~~~~~~~ 241 (252)
T PRK14256 231 TKKIFTTPEKK 241 (252)
T ss_pred HHHHHhCCCcH
Confidence 99998765443
No 212
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-40 Score=368.12 Aligned_cols=219 Identities=24% Similarity=0.428 Sum_probs=183.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCC--CChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITT--IGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~--i~~~ 1075 (1255)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5999999999963 469999999999999999999999999999999999865 789999999999865 3445
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCC---CC-C----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLS---QF-T----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~-s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
.+|++++|+||+|.+|++|+++|+.... .. . ++.+.+ +++.+++.+.+. ........+|
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~-------~~~~~~~~~L 165 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEE------SLTKAALWDEVK-------DRLHSSALSL 165 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHH------HHHHcCCCcchH-------HHHhcCcccC
Confidence 6788999999999999999999997421 11 1 112222 555555432211 2233445689
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||||||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 166 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 245 (268)
T PRK14248 166 SGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYD 245 (268)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999988667899999999998865 9999999999999999
Q ss_pred ChhHHhhcCC
Q 000845 1227 EPKKLLRRQD 1236 (1255)
Q Consensus 1227 ~~~eLl~~~~ 1236 (1255)
+++++..++.
T Consensus 246 ~~~~~~~~~~ 255 (268)
T PRK14248 246 QTEQIFTSPK 255 (268)
T ss_pred CHHHHHhCCC
Confidence 9999987643
No 213
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=7e-40 Score=375.72 Aligned_cols=231 Identities=22% Similarity=0.398 Sum_probs=187.2
Q ss_pred eEEEEEEEEEeCC--CCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CCEEEEcCEeCCCCChHHh
Q 000845 1003 KVEIYDLQIRYRP--NAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT---GGKIIIDGLDITTIGLYDL 1077 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~--~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~---~G~I~idG~di~~i~~~~l 1077 (1255)
-++++|++++|+. +...+++||||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.|+..++..++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 5999999999953 2246999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cccEEEccCC--ccCC-Cchhhhcc----cCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1078 R----SNLGIIPQDP--TLFS-GSVRYNLD----PLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1078 R----~~i~~vpQdp--~Lf~-gTIr~Nl~----~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
| ++|+||||+| .+++ -|+.+|+. .....+.++..+ ...++++.+++. ++. ..++....+
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~--~~~~~L~~vgL~-------~~~-~~~~~~p~~ 161 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFE--ESVRMLDAVKMP-------EAR-KRMKMYPHE 161 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcCCC-------ChH-HHhcCCccc
Confidence 3 4799999999 4554 37777663 222223332221 001245555442 221 224455678
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEE
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLV 1223 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv 1223 (1255)
||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||.+|+|+
T Consensus 162 LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~iv 241 (330)
T PRK09473 162 FSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTM 241 (330)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999987654 7899999999999975 9999999999999
Q ss_pred EEcChhHHhhcCChHHHHHH
Q 000845 1224 EYDEPKKLLRRQDSLFAQLV 1243 (1255)
Q Consensus 1224 e~G~~~eLl~~~~~~f~~l~ 1243 (1255)
|.|+++++.+++...|.+.+
T Consensus 242 e~g~~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 242 EYGNARDVFYQPSHPYSIGL 261 (330)
T ss_pred EECCHHHHHhCCCCHHHHHH
Confidence 99999999988766666543
No 214
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-40 Score=381.83 Aligned_cols=204 Identities=25% Similarity=0.420 Sum_probs=175.8
Q ss_pred ceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh----hcccEEEccCCccCCC-
Q 000845 1019 LVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL----RSNLGIIPQDPTLFSG- 1093 (1255)
Q Consensus 1019 ~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l----R~~i~~vpQdp~Lf~g- 1093 (1255)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+.+.+...+ |++++|+||++.+|..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999999999998877654 4689999999999975
Q ss_pred chhhhcccCC---CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCC
Q 000845 1094 SVRYNLDPLS---QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQ 1166 (1255)
Q Consensus 1094 TIr~Nl~~~~---~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ 1166 (1255)
|+++|+.+.. ..+. +++.+ +++.+++.++..+.| .+||||||||++|||||+.+|+
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e------~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~ 184 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALD------ALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPD 184 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHH------HHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCC
Confidence 9999997421 1222 22333 677777765554433 4799999999999999999999
Q ss_pred eEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcCChHH
Q 000845 1167 ILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQDSLF 1239 (1255)
Q Consensus 1167 ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~~~f 1239 (1255)
||||||||++||+.+.+.+++.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++...|
T Consensus 185 iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 185 ILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999999999999999998864 47899999999999865 99999999999999999999988765444
No 215
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.3e-39 Score=363.28 Aligned_cols=219 Identities=26% Similarity=0.392 Sum_probs=181.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC--------h
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG--------L 1074 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~--------~ 1074 (1255)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999963 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHhhcccEEEccCCccCC-CchhhhcccC----CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCCh
Q 000845 1075 YDLRSNLGIIPQDPTLFS-GSVRYNLDPL----SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSM 1149 (1255)
Q Consensus 1075 ~~lR~~i~~vpQdp~Lf~-gTIr~Nl~~~----~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1149 (1255)
..+|++++|+||+|.+|. .|+++|+... .....++..+ ...++++..++ +........+|||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~~~l~~~gl-----------~~~~~~~~~~LS~ 147 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA--RARELLAKVGL-----------AGKETSYPRRLSG 147 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcCC-----------cchhhCChhhCCh
Confidence 457889999999999886 6999999631 1112221111 00013444443 3333445568999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcC
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1227 (1255)
|||||++||||++.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 148 Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 227 (250)
T PRK11264 148 GQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGP 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998765 37899999999999976 99999999999999999
Q ss_pred hhHHhhcCC
Q 000845 1228 PKKLLRRQD 1236 (1255)
Q Consensus 1228 ~~eLl~~~~ 1236 (1255)
++++.+.+.
T Consensus 228 ~~~~~~~~~ 236 (250)
T PRK11264 228 AKALFADPQ 236 (250)
T ss_pred HHHHhcCCC
Confidence 999876543
No 216
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=7.1e-40 Score=367.48 Aligned_cols=224 Identities=25% Similarity=0.402 Sum_probs=183.6
Q ss_pred EEEEEEEEEeCCC-------CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH
Q 000845 1004 VEIYDLQIRYRPN-------APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD 1076 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~-------~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~ 1076 (1255)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 356999999999999999999999999999999999999999999999999998876543
Q ss_pred ---hhcccEEEccCCc--cC-CCchhhhcccC----CCCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcC
Q 000845 1077 ---LRSNLGIIPQDPT--LF-SGSVRYNLDPL----SQFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQ 1142 (1255)
Q Consensus 1077 ---lR~~i~~vpQdp~--Lf-~gTIr~Nl~~~----~~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e 1142 (1255)
+|+.|+|+||+|. ++ ..|+++|+... ..... +++.+ +++..++.+ .....
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~------~l~~~gl~~----------~~~~~ 146 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAE------LLDMVGLRS----------EDADK 146 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHH------HHHHcCCCh----------hhhhC
Confidence 6788999999983 44 36999998521 11111 12222 444444421 22334
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeC
Q 000845 1143 DGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSD 1219 (1255)
Q Consensus 1143 ~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~ 1219 (1255)
....||||||||++||||++.+|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||++++|++
T Consensus 147 ~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~ 226 (265)
T TIGR02769 147 LPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDK 226 (265)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeC
Confidence 4568999999999999999999999999999999999999999999988653 7899999999999975 999999999
Q ss_pred CEEEEEcChhHHhhcCChHHHHHH
Q 000845 1220 GKLVEYDEPKKLLRRQDSLFAQLV 1243 (1255)
Q Consensus 1220 G~ive~G~~~eLl~~~~~~f~~l~ 1243 (1255)
|++++.|+++++...++..++++.
T Consensus 227 G~i~~~g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 227 GQIVEECDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred CEEEEECCHHHHcCCCCHHHHHHH
Confidence 999999999999875443444454
No 217
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.2e-40 Score=364.52 Aligned_cols=212 Identities=21% Similarity=0.330 Sum_probs=181.4
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh-hccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL-RSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l-R~~i 1081 (1255)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+.+
T Consensus 2 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 2 ILYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred eEEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 3789999999953 469999999999999999999999999999999999999999999999999988776653 5679
Q ss_pred EEEccCCccCCC-chhhhcccCCCCC---------------hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCC
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQFT---------------DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~~s---------------d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
+|+||++.+|.+ |+++|+....... ++++.+ +++..+ ++........
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~-----------l~~~~~~~~~ 142 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEE------VLETIG-----------LADEADRLAG 142 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHH------HHHHcC-----------CchhhcCChh
Confidence 999999999987 9999997532100 111111 333333 4333444556
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1224 (1255)
.||||||||++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~ 222 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLA 222 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEe
Confidence 89999999999999999999999999999999999999999999987777899999999999976 99999999999999
Q ss_pred EcChhHHhh
Q 000845 1225 YDEPKKLLR 1233 (1255)
Q Consensus 1225 ~G~~~eLl~ 1233 (1255)
.|+++++..
T Consensus 223 ~~~~~~~~~ 231 (242)
T TIGR03411 223 EGSLDQVQA 231 (242)
T ss_pred eCCHHHHhc
Confidence 999999875
No 218
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=366.10 Aligned_cols=227 Identities=22% Similarity=0.366 Sum_probs=186.2
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCC--CC
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITT--IG 1073 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~--i~ 1073 (1255)
...++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 22 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 346999999999963 359999999999999999999999999999999999987 699999999999853 34
Q ss_pred hHHhhcccEEEccCCccCCCchhhhcccC---CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1074 LYDLRSNLGIIPQDPTLFSGSVRYNLDPL---SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1074 ~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~---~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
...+|++++|+||+|.+|..|+++|+... ....+++..+. ...++++..++.+ ++.......+.+||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~-------~l~~~~~~~~~~LSgG 171 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDE-IVEKSLRGAAIWD-------ELKDRLHDNAYGLSGG 171 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHH-HHHHHHHHcCCcc-------hHHHHHhcCcccCCHH
Confidence 56788999999999999999999999732 12222211110 0011344443322 2223334556789999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChh
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPK 1229 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1229 (1255)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|+++
T Consensus 172 e~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~ 251 (271)
T PRK14238 172 QQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTD 251 (271)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778999999999999876 9999999999999999999
Q ss_pred HHhhcCCh
Q 000845 1230 KLLRRQDS 1237 (1255)
Q Consensus 1230 eLl~~~~~ 1237 (1255)
++..++..
T Consensus 252 ~~~~~~~~ 259 (271)
T PRK14238 252 KIFSNPSD 259 (271)
T ss_pred HHHcCCCC
Confidence 99876543
No 219
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=363.70 Aligned_cols=223 Identities=22% Similarity=0.382 Sum_probs=186.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC-----CCEEEEcCEeCCCC--ChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT-----GGKIIIDGLDITTI--GLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~-----~G~I~idG~di~~i--~~~ 1075 (1255)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 5899999999953 45999999999999999999999999999999999999987 69999999998643 445
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCC---CC-ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLS---QF-TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~-sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
.+|+.++|+||+|.+|+.|+++|+.+.. .. ..++..+ ...++++..++++.+. ......+.+|||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq 152 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDE--VVEKSLRQAALWDEVK-------DNLHKSGLALSGGQ 152 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHH--HHHHHHHHhCCchhhh-------hHhhCCcccCCHHH
Confidence 7889999999999999999999997421 11 1111111 0012455566554332 22445567899999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|++++
T Consensus 153 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 153 QQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667999999999999987 79999999999999999999
Q ss_pred HhhcCC
Q 000845 1231 LLRRQD 1236 (1255)
Q Consensus 1231 Ll~~~~ 1236 (1255)
+...+.
T Consensus 233 ~~~~~~ 238 (251)
T PRK14249 233 IFSRPR 238 (251)
T ss_pred HHhCCC
Confidence 976543
No 220
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-40 Score=368.92 Aligned_cols=212 Identities=24% Similarity=0.390 Sum_probs=184.3
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999953 46999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCccCCC-chhhhcccCCC--------C---ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLSQ--------F---TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~~--------~---sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
|+||++.++.+ |+++|+..... . .++++.+ +++.+++.+.....| .+||||
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LSgG 151 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEE------AISLVGLKPLAHRLV-----------DSLSGG 151 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHH------HHHHcCCHHHhcCCc-----------ccCCHH
Confidence 99999877665 99999974210 1 1223333 677777765443332 479999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcC
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1227 (1255)
||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 152 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~ 231 (265)
T PRK10575 152 ERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGT 231 (265)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecC
Confidence 9999999999999999999999999999999999999998864 27899999999999965 99999999999999999
Q ss_pred hhHHhh
Q 000845 1228 PKKLLR 1233 (1255)
Q Consensus 1228 ~~eLl~ 1233 (1255)
++++..
T Consensus 232 ~~~~~~ 237 (265)
T PRK10575 232 PAELMR 237 (265)
T ss_pred HHHhcC
Confidence 998865
No 221
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6.7e-40 Score=361.39 Aligned_cols=215 Identities=25% Similarity=0.432 Sum_probs=179.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh-hcccE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL-RSNLG 1082 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l-R~~i~ 1082 (1255)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+.... |+.++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999953 459999999999999999999999999999999999999999999999999988776553 57899
Q ss_pred EEccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
|+||++.+|.+ |+++|+.... ....++..+ ...++++..+ ++........+||||||||++||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrl~la 145 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREE--KLEELLEEFH-----------ITHLRKSKASSLSGGERRRVEIA 145 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcC-----------ChhhhhCChhhCCHHHHHHHHHH
Confidence 99999999987 9999997421 111111111 0001333333 44334445568999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhh
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLR 1233 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~ 1233 (1255)
||++++|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 146 ~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 146 RALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 99999999999999999999999999999998764 47899999999988766 99999999999999999998865
No 222
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=6.3e-40 Score=358.79 Aligned_cols=203 Identities=27% Similarity=0.438 Sum_probs=171.1
Q ss_pred EEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH---hh
Q 000845 1004 VEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD---LR 1078 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~---lR 1078 (1255)
++++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996422 46999999999999999999999999999999999999999999999999998887654 34
Q ss_pred -cccEEEccCCccCC-CchhhhcccC---CCCChH----HHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCCh
Q 000845 1079 -SNLGIIPQDPTLFS-GSVRYNLDPL---SQFTDQ----EIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSM 1149 (1255)
Q Consensus 1079 -~~i~~vpQdp~Lf~-gTIr~Nl~~~---~~~sd~----ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1149 (1255)
++++|+||+|.+|. .|+++|+... .....+ ++.+ +++..++.+. .......|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~-----------~~~~~~~LS~ 144 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYE------MLEKVGLEHR-----------INHRPSELSG 144 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHH------HHHHcCChhh-----------hhCChhhCCH
Confidence 68999999999996 5999999642 112211 2222 4555554433 3333467999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhhcCEEEEEeCCEEE
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMDCNMVLSMSDGKLV 1223 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~iv 1223 (1255)
|||||++||||++++|+||||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+..||+|++|++|+++
T Consensus 145 G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 145 GERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999999998764 378999999999999889999999999986
No 223
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-40 Score=369.95 Aligned_cols=215 Identities=25% Similarity=0.432 Sum_probs=185.8
Q ss_pred eEEEEEEEEEeCCC----CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC-hHHh
Q 000845 1003 KVEIYDLQIRYRPN----APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG-LYDL 1077 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~----~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~-~~~l 1077 (1255)
-++++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999642 246999999999999999999999999999999999999999999999999997654 3567
Q ss_pred hcccEEEccCCc--cCCCchhhhcccCC---CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1078 RSNLGIIPQDPT--LFSGSVRYNLDPLS---QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1078 R~~i~~vpQdp~--Lf~gTIr~Nl~~~~---~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
|++++|+||+|. +|..|+.+|+.+.. ..+. +++.+ +++.+++.++....| .+||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~------~l~~~gL~~~~~~~~-----------~~LS 146 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDE------SLKKVGMYEYRRHAP-----------HLLS 146 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHH------HHHHCCCHhHhhCCc-----------ccCC
Confidence 899999999984 67679999996432 1222 22333 777788776655443 4799
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhhcCEEEEEeCCEEEEEc
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMDCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1226 (1255)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+..||++++|++|++++.|
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g 226 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEG 226 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEec
Confidence 999999999999999999999999999999999999999999864 378999999999999889999999999999999
Q ss_pred ChhHHhhc
Q 000845 1227 EPKKLLRR 1234 (1255)
Q Consensus 1227 ~~~eLl~~ 1234 (1255)
+++++..+
T Consensus 227 ~~~~~~~~ 234 (280)
T PRK13633 227 TPKEIFKE 234 (280)
T ss_pred CHHHHhcC
Confidence 99999764
No 224
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-40 Score=369.60 Aligned_cols=219 Identities=22% Similarity=0.416 Sum_probs=184.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++|++++|+...+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 59999999999754346999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEccCCc--cCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1083 IIPQDPT--LFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1083 ~vpQdp~--Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
|+||+|. ++..|+++|+.... ....++..+ ...++++..++.++.. ....+||+|||||++|
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~l 153 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR--RVSEALKQVDMLERAD-----------YEPNALSGGQKQRVAI 153 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH--HHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHHH
Confidence 9999994 44568999986421 112222111 0012556666544332 2346799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|||++.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||||++|++|++++.|+++++..+
T Consensus 154 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 154 AGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999999999988653 7899999999999988999999999999999999998764
No 225
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-40 Score=363.31 Aligned_cols=216 Identities=23% Similarity=0.367 Sum_probs=178.7
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCC------CCChHHh
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDIT------TIGLYDL 1077 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~------~i~~~~l 1077 (1255)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+
T Consensus 3 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 3 IQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 789999999953 46999999999999999999999999999999999999999999999999874 1234567
Q ss_pred hcccEEEccCCccCCC-chhhhcccC--C--CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1078 RSNLGIIPQDPTLFSG-SVRYNLDPL--S--QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1078 R~~i~~vpQdp~Lf~g-TIr~Nl~~~--~--~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
|++++|+||+|.+|.+ |+++|+... . ....++..+ ...++++..++.++. .....+||||||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~--~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~ 147 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALA--RAEKLLERLRLKPYA-----------DRFPLHLSGGQQ 147 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCChhhh-----------hCChhhCCHHHH
Confidence 8899999999999976 999999621 1 112222111 001144555544433 333457999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
||++||||++++|+||||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 227 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASC 227 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998765 37899999999999976 99999999999999999998
Q ss_pred Hhhc
Q 000845 1231 LLRR 1234 (1255)
Q Consensus 1231 Ll~~ 1234 (1255)
+.+.
T Consensus 228 ~~~~ 231 (242)
T PRK11124 228 FTQP 231 (242)
T ss_pred hcCc
Confidence 7653
No 226
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=366.79 Aligned_cols=221 Identities=23% Similarity=0.359 Sum_probs=187.6
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCC--CC
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITT--IG 1073 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~--i~ 1073 (1255)
.+.++++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 23 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 23 QTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred CcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 457999999999953 4699999999999999999999999999999999999884 89999999999875 34
Q ss_pred hHHhhcccEEEccCCccCCCchhhhcccCC---CC-Ch----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCC
Q 000845 1074 LYDLRSNLGIIPQDPTLFSGSVRYNLDPLS---QF-TD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1074 ~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~-sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
...+|+.++|+||++.+|++|+++|+.+.. .. .. +++.+ +++.+++.+.+. +..+..+.
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~-------~~~~~~~~ 167 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVER------SLRGAALWDEVK-------DRLHENAF 167 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHH------HHHHcCCChhHH-------HHhhCCcc
Confidence 567889999999999999999999996421 11 11 22333 566666654332 22344567
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1224 (1255)
+||||||||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++
T Consensus 168 ~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~ 247 (272)
T PRK14236 168 GLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVE 247 (272)
T ss_pred cCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEe
Confidence 89999999999999999999999999999999999999999999988778899999999999865 99999999999999
Q ss_pred EcChhHHhhcCC
Q 000845 1225 YDEPKKLLRRQD 1236 (1255)
Q Consensus 1225 ~G~~~eLl~~~~ 1236 (1255)
.|+++++.+.+.
T Consensus 248 ~g~~~~~~~~~~ 259 (272)
T PRK14236 248 YGDTDTLFTSPA 259 (272)
T ss_pred cCCHHHHhcCCC
Confidence 999999986543
No 227
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=364.89 Aligned_cols=219 Identities=20% Similarity=0.387 Sum_probs=186.3
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCC--CChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITT--IGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~--i~~~ 1075 (1255)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 5999999999953 369999999999999999999999999999999999986 479999999999853 4556
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCCC---CC---hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCCh
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLSQ---FT---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSM 1149 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~---~s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1149 (1255)
.+|++++|+||+|.+|+.|+++|+.+... .. ++++.+ +++.+++.+.+.. .......+|||
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~l~~-------~~~~~~~~LSg 154 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVER------SLRQAALWDEVKD-------KLKQSGLSLSG 154 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHH------HHHHhCchhhHHH-------HhcCCcccCCH
Confidence 78899999999999998999999974221 11 122222 5677777655432 22344568999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEe---------C
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMS---------D 1219 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~---------~ 1219 (1255)
|||||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|+ +
T Consensus 155 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~ 234 (264)
T PRK14243 155 GQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRY 234 (264)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccC
Confidence 9999999999999999999999999999999999999999988777899999999999876 89999998 8
Q ss_pred CEEEEEcChhHHhhcCC
Q 000845 1220 GKLVEYDEPKKLLRRQD 1236 (1255)
Q Consensus 1220 G~ive~G~~~eLl~~~~ 1236 (1255)
|+|++.|+++|+.+++.
T Consensus 235 g~i~~~~~~~~~~~~~~ 251 (264)
T PRK14243 235 GYLVEFDRTEKIFNSPQ 251 (264)
T ss_pred ceEEEeCCHHHHHhCCC
Confidence 99999999999987654
No 228
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-40 Score=364.15 Aligned_cols=227 Identities=20% Similarity=0.363 Sum_probs=189.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCC--CChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITT--IGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~--i~~~ 1075 (1255)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||.+++. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999963 459999999999999999999999999999999999874 489999999999875 3456
Q ss_pred HhhcccEEEccCCccCCCchhhhcccC-C--CCCh-HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPL-S--QFTD-QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~-~--~~sd-~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
.+|++++|+||+|.+|.+|+++|+... . ...+ ++..+ ...++++.+++.+.+... ....+.+||+||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq 151 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEE--RVEESLKAAALWDEVKDK-------LDKSALGLSGGQ 151 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHH--HHHHHHHHcCCchhHHHH-------HhCCcccCCHHH
Confidence 789999999999999999999999742 1 1112 21111 011267777776655422 234456899999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~ 231 (250)
T PRK14266 152 QQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQ 231 (250)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999877 89999999999999999999
Q ss_pred HhhcCChHHH
Q 000845 1231 LLRRQDSLFA 1240 (1255)
Q Consensus 1231 Ll~~~~~~f~ 1240 (1255)
+...+.+.+.
T Consensus 232 ~~~~~~~~~~ 241 (250)
T PRK14266 232 IFINPKDKRT 241 (250)
T ss_pred HHhCCCChHH
Confidence 9876555443
No 229
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-40 Score=374.68 Aligned_cols=227 Identities=20% Similarity=0.329 Sum_probs=184.4
Q ss_pred eEEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC----CCCCEEEEcCEeCCCCChHH
Q 000845 1003 KVEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE----PTGGKIIIDGLDITTIGLYD 1076 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~----~~~G~I~idG~di~~i~~~~ 1076 (1255)
-++++|++++|+... ..+|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 379999999996432 359999999999999999999999999999999999997 48999999999999988776
Q ss_pred hhc----ccEEEccCCc--cCC-Cchhhhc----ccCCCCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhc
Q 000845 1077 LRS----NLGIIPQDPT--LFS-GSVRYNL----DPLSQFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVV 1141 (1255)
Q Consensus 1077 lR~----~i~~vpQdp~--Lf~-gTIr~Nl----~~~~~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~ 1141 (1255)
+|+ .|+||||+|. +++ -|+.+|+ ........ +.+.+ +++.+++.+.. ....
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~------~L~~~gL~~~~--------~~l~ 148 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAID------LLNQVGIPDPA--------SRLD 148 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHH------HHHHCCCCChH--------HHHh
Confidence 543 6999999995 343 2555544 32211222 22333 67777764321 1123
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEe
Q 000845 1142 QDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMS 1218 (1255)
Q Consensus 1142 e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~ 1218 (1255)
....+||||||||++|||||+.+|++||+||||++||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||+
T Consensus 149 ~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~ 228 (326)
T PRK11022 149 VYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMY 228 (326)
T ss_pred CCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 34568999999999999999999999999999999999999999999988753 7899999999999965 99999999
Q ss_pred CCEEEEEcChhHHhhcCChHHHHHH
Q 000845 1219 DGKLVEYDEPKKLLRRQDSLFAQLV 1243 (1255)
Q Consensus 1219 ~G~ive~G~~~eLl~~~~~~f~~l~ 1243 (1255)
+|+|+|.|+++++.+++...|.+.+
T Consensus 229 ~G~ive~g~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 229 AGQVVETGKAHDIFRAPRHPYTQAL 253 (326)
T ss_pred CCEEEEECCHHHHhhCCCChHHHHH
Confidence 9999999999999988766665443
No 230
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-40 Score=365.52 Aligned_cols=225 Identities=21% Similarity=0.355 Sum_probs=187.0
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCC--CCh
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITT--IGL 1074 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~--i~~ 1074 (1255)
+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999963 4599999999999999999999999999999999999985 48999999999864 445
Q ss_pred HHhhcccEEEccCCccCCCchhhhcccCC----CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1075 YDLRSNLGIIPQDPTLFSGSVRYNLDPLS----QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1075 ~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~----~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
..+|++++|+||+|.+|+.|+++|+.+.. ...+.+..+ ...++++.+++.+.+... .......||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~G 154 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDE--IVESALKGAALWQEVKDK-------LNKSALGLSGG 154 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcCCcchhhhH-------hcCCcccCCHH
Confidence 67888999999999999999999996421 112222111 001267777775544321 23345689999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEe-----CCEEEE
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMS-----DGKLVE 1224 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~-----~G~ive 1224 (1255)
||||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|+ +|++++
T Consensus 155 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 234 (259)
T PRK14260 155 QQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVE 234 (259)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEE
Confidence 999999999999999999999999999999999999999987777899999999999976 89999998 599999
Q ss_pred EcChhHHhhcCCh
Q 000845 1225 YDEPKKLLRRQDS 1237 (1255)
Q Consensus 1225 ~G~~~eLl~~~~~ 1237 (1255)
.|+++++.+++..
T Consensus 235 ~~~~~~~~~~~~~ 247 (259)
T PRK14260 235 FGVTTQIFSNPLD 247 (259)
T ss_pred eCCHHHHhcCCCC
Confidence 9999999865443
No 231
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-40 Score=359.61 Aligned_cols=203 Identities=26% Similarity=0.354 Sum_probs=172.4
Q ss_pred EEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1004 VEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999996421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEccCCccCC-CchhhhcccCC---CCC----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1082 GIIPQDPTLFS-GSVRYNLDPLS---QFT----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1082 ~~vpQdp~Lf~-gTIr~Nl~~~~---~~s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
+|+||+|.+|. .|+++|+.... ... ++++.+ +++..++.+...+.| .+|||||||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LSgG~~q 138 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEE------LLELVGLSGFENAYP-----------HQLSGGMRQ 138 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHH------HHHHcCChhhhhCCc-----------ccCCHHHHH
Confidence 99999999987 69999996321 111 122333 666776655544332 479999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEe--CCEEEEEcCh
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMS--DGKLVEYDEP 1228 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~--~G~ive~G~~ 1228 (1255)
|++||||++++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 139 rl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 139 RVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999999998764 37899999999998865 99999999 7999998764
No 232
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.9e-40 Score=361.63 Aligned_cols=217 Identities=23% Similarity=0.367 Sum_probs=180.8
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC--hHHhhccc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG--LYDLRSNL 1081 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~--~~~lR~~i 1081 (1255)
++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999953 46999999999999999999999999999999999999999999999999997643 35678899
Q ss_pred EEEccCCccCC-CchhhhcccCC----CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1082 GIIPQDPTLFS-GSVRYNLDPLS----QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1082 ~~vpQdp~Lf~-gTIr~Nl~~~~----~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
+|+||++.+|. .|+++|+.... ..+.++..+ ...++++..++.+. .......||||||||++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrv~ 146 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK--QARELLAKVGLAER-----------AHHYPSELSGGQQQRVA 146 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH--HHHHHHHHcCChHH-----------HhcChhhcCHHHHHHHH
Confidence 99999999886 59999996421 112222111 00124454444333 33344679999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++.++++.
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 147 IARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 9999999999999999999999999999999998764 47899999999999965 999999999999999999998765
Q ss_pred C
Q 000845 1235 Q 1235 (1255)
Q Consensus 1235 ~ 1235 (1255)
+
T Consensus 227 ~ 227 (240)
T PRK09493 227 P 227 (240)
T ss_pred C
Confidence 3
No 233
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-40 Score=365.93 Aligned_cols=211 Identities=21% Similarity=0.389 Sum_probs=183.3
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++..++...+++.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999953 469999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EccCCccCCC-chhhhcccCC-C-------CC---hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLS-Q-------FT---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~-~-------~s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
+||++.+|.+ |+++|+++.. . .. ++++.+ +++.+++.+... .....|||||
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~-----------~~~~~LS~G~ 143 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQ------AMEQTRINHLAD-----------RRLTDLSGGQ 143 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHH------HHHHcCCHHHHc-----------CCcccCCHHH
Confidence 9999999877 9999997531 0 11 112322 566666654432 2345799999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChh
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPK 1229 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1229 (1255)
|||++||||++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 144 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 223 (255)
T PRK11231 144 RQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPE 223 (255)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHH
Confidence 999999999999999999999999999999999999998764 47899999999999876 9999999999999999999
Q ss_pred HHhh
Q 000845 1230 KLLR 1233 (1255)
Q Consensus 1230 eLl~ 1233 (1255)
++..
T Consensus 224 ~~~~ 227 (255)
T PRK11231 224 EVMT 227 (255)
T ss_pred HhcC
Confidence 9875
No 234
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=366.50 Aligned_cols=220 Identities=21% Similarity=0.404 Sum_probs=185.2
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCCC--Ch
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITTI--GL 1074 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~i--~~ 1074 (1255)
..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++... +.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 45999999999963 459999999999999999999999999999999999997 6899999999998653 45
Q ss_pred HHhhcccEEEccCCccCCCchhhhcccCC---CCC---hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1075 YDLRSNLGIIPQDPTLFSGSVRYNLDPLS---QFT---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1075 ~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
..+|++++|+||++.+|.+|+++|+.... ... ++++.+ +++..++.+.+.. .......+||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~i~~-------~~~~~~~~LS 182 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEE------SLRRAALWDEVKD-------QLDSSGLDLS 182 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHH------HHHHcCCCchhHH-------HHhCCcccCC
Confidence 67789999999999999999999997421 111 233333 6666666433321 2234456899
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEE-EEeCCEEEEEc
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVL-SMSDGKLVEYD 1226 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~-vl~~G~ive~G 1226 (1255)
||||||++|||||+++|+||||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. |||++ +|++|+|++.|
T Consensus 183 gGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g 262 (285)
T PRK14254 183 GGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFD 262 (285)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeC
Confidence 99999999999999999999999999999999999999999988777899999999999876 99975 57999999999
Q ss_pred ChhHHhhcCC
Q 000845 1227 EPKKLLRRQD 1236 (1255)
Q Consensus 1227 ~~~eLl~~~~ 1236 (1255)
+++++.+++.
T Consensus 263 ~~~~~~~~~~ 272 (285)
T PRK14254 263 DTDKIFENPE 272 (285)
T ss_pred CHHHHHhCcC
Confidence 9999986543
No 235
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=9.6e-40 Score=356.20 Aligned_cols=210 Identities=22% Similarity=0.316 Sum_probs=184.6
Q ss_pred EEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh----HHhhcc
Q 000845 1005 EIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL----YDLRSN 1080 (1255)
Q Consensus 1005 ~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~----~~lR~~ 1080 (1255)
.+.|+.|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 567999999755 569999999999999999999999999999999999999999999999998876542 345678
Q ss_pred cEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1081 LGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1081 i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
++|+||+|.+|+.|+++|+.......+++..+ +++.+++.+.+..+|.|+++.++....+||||||||++||||
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~lara 154 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKA------VTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARA 154 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHH------HHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHH
Confidence 99999999999999999998654444555554 788889988888899999999888889999999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHH--HHHHHc-CCcEEEEeccCchhhhhcCEEEEEeCCE
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQN--TIRREF-ANCTVITVAHRIATVMDCNMVLSMSDGK 1221 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~--~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1221 (1255)
++++|++|||||||++||+.+.+.+.+ .++... .+.|+|++||+++.+..||++++|++|.
T Consensus 155 l~~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 155 LYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred HhhCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999999999888877 444332 3689999999999998899999999984
No 236
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=4.5e-40 Score=357.78 Aligned_cols=206 Identities=25% Similarity=0.393 Sum_probs=172.4
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 4699999999999999999999999999999999999999999999999999766543 568999
Q ss_pred EccCCccCC-CchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1084 IPQDPTLFS-GSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1084 vpQdp~Lf~-gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
+||++.+|. .|+++|+.... ....++..+ ...++++..++.+.... ....||||||||++|||
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~lar 143 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE--RVREVAELLQIEHLLDR-----------KPKQLSGGQRQRVALGR 143 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcCCHHHHhC-----------ChhhCCHHHHHHHHHHH
Confidence 999999986 59999997421 122222111 00125666666554433 23579999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|++++|+++||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 144 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 144 AIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999999998864 37899999999999876 8999999999999876
No 237
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.2e-40 Score=357.49 Aligned_cols=204 Identities=31% Similarity=0.473 Sum_probs=170.4
Q ss_pred EEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEE
Q 000845 1005 EIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGII 1084 (1255)
Q Consensus 1005 ~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~v 1084 (1255)
+++|++++|+.+..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++|+|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999964334699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred ccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1085 PQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1085 pQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
||+| .++..|+++|+.... ..++++..+ ...++++..++.+... .....||||||||++|||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~lar 147 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE--RVEEALELVGLEGLRD-----------RSPFTLSGGQKQRVAIAG 147 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCcHhhhc-----------CCcccCCHHHHHHHHHHH
Confidence 9998 367889999996421 122221111 0012555555544433 334679999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeccCchhhhh-cCEEEEEeCCE
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREFA-NCTVITVAHRIATVMD-CNMVLSMSDGK 1221 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1221 (1255)
|++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 148 VLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999999988653 7899999999999987 99999999985
No 238
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.2e-40 Score=361.00 Aligned_cols=212 Identities=27% Similarity=0.423 Sum_probs=178.0
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH-hhcccE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD-LRSNLG 1082 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~-lR~~i~ 1082 (1255)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999963 36999999999999999999999999999999999999999999999999998877655 467899
Q ss_pred EEccCCccCCC-chhhhcccCC-CC--ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLS-QF--TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~-~~--sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
|+||++.+|.+ |+++|+.... .. .+++..+ ++++..+ +++........+||||||||++||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la 143 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPD-----EIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIA 143 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHH-----HHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHH
Confidence 99999999987 9999996321 11 1111111 1233322 122233344567999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
||++++|+++||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 144 ~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 144 RALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 999999999999999999999999999999998653 7899999999999986 9999999999999999999873
No 239
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=368.11 Aligned_cols=219 Identities=26% Similarity=0.397 Sum_probs=181.3
Q ss_pred EEEEEEEEEeCCCC---CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCC----ChHH
Q 000845 1004 VEIYDLQIRYRPNA---PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTI----GLYD 1076 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~---~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i----~~~~ 1076 (1255)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999996432 3599999999999999999999999999999999999999999999999998764 3467
Q ss_pred hhcccEEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1077 LRSNLGIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1077 lR~~i~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
+|++|+|+||+| .+|+.|+++|+.+.. ..+.++..+. ..++++..++.+ ........+|||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~~l~~~~l~~----------~~~~~~~~~LSgG~ 150 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL--AREKLALVGISE----------SLFEKNPFELSGGQ 150 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH--HHHHHHHcCCCh----------hhhhCCcccCCHHH
Confidence 889999999998 688899999996421 1233332210 011344444421 12233456799999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChh
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPK 1229 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1229 (1255)
|||++||||++++|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (280)
T PRK13649 151 MRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPK 230 (280)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998764 37899999999999865 9999999999999999999
Q ss_pred HHhhc
Q 000845 1230 KLLRR 1234 (1255)
Q Consensus 1230 eLl~~ 1234 (1255)
++...
T Consensus 231 ~~~~~ 235 (280)
T PRK13649 231 DIFQD 235 (280)
T ss_pred HHhcC
Confidence 98764
No 240
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=365.22 Aligned_cols=222 Identities=20% Similarity=0.334 Sum_probs=188.1
Q ss_pred CCCceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCC---
Q 000845 999 PPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDIT--- 1070 (1255)
Q Consensus 999 p~~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~--- 1070 (1255)
|..+.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 12 ~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 12 PTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 45678999999999963 3699999999999999999999999999999999999875 7999999998874
Q ss_pred -CCChHHhhcccEEEccCCccCCCchhhhcccCC---CCC-----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhc
Q 000845 1071 -TIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS---QFT-----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVV 1141 (1255)
Q Consensus 1071 -~i~~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~s-----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~ 1141 (1255)
......+|+.++|+||+|.+|.+|+++|+.... ... ++++.+ +++.+++.+.+. ...+
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~l~-------~~~~ 156 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVEN------ALRNAALWDEVK-------DRLG 156 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHH------HHHHcCCchhhh-------HHHh
Confidence 334557889999999999999999999996421 111 233333 666666543222 2334
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCC
Q 000845 1142 QDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDG 1220 (1255)
Q Consensus 1142 e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G 1220 (1255)
....+||||||||++||||++++|+++||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|
T Consensus 157 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G 236 (265)
T PRK14252 157 DLAFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMG 236 (265)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 455789999999999999999999999999999999999999999999987777899999999999975 9999999999
Q ss_pred EEEEEcChhHHhhcC
Q 000845 1221 KLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1221 ~ive~G~~~eLl~~~ 1235 (1255)
++++.|+++++..++
T Consensus 237 ~i~~~g~~~~~~~~~ 251 (265)
T PRK14252 237 ELIEFGATDTIFIKP 251 (265)
T ss_pred EEEEeCCHHHHHhCC
Confidence 999999999998654
No 241
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=362.17 Aligned_cols=222 Identities=21% Similarity=0.369 Sum_probs=185.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCCC--ChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITTI--GLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~i--~~~ 1075 (1255)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999963 4699999999999999999999999999999999999875 799999999999653 345
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCCC---C-ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLSQ---F-TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~---~-sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
.+|++++|+||++.+|+.|+++|+.+... . +.++..+ ...++++.+++.+.+.. ........||+||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~ 152 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDK--IVEWALKKAALWDEVKD-------DLKKSALKLSGGQ 152 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHH--HHHHHHHHcCCchhhhh-------HhhCCcccCCHHH
Confidence 67889999999999999999999974211 1 1111111 00126666666433221 2233456899999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|||++||||++++|+||||||||++||+.+.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|++++
T Consensus 153 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 232 (251)
T PRK14270 153 QQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEK 232 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999988777899999999999876 99999999999999999999
Q ss_pred HhhcC
Q 000845 1231 LLRRQ 1235 (1255)
Q Consensus 1231 Ll~~~ 1235 (1255)
+...+
T Consensus 233 ~~~~~ 237 (251)
T PRK14270 233 IFLEP 237 (251)
T ss_pred HhcCC
Confidence 97654
No 242
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=363.24 Aligned_cols=224 Identities=21% Similarity=0.337 Sum_probs=187.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCCC--ChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITTI--GLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~i--~~~ 1075 (1255)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.++ ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5899999999953 4699999999999999999999999999999999999763 489999999999876 456
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCCC---C-Ch----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLSQ---F-TD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~---~-sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
..|+.++|+||+|.+|++|+++|+.+... . .. +.+.+ +++.+++.+.+ .+.....+.+|
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~l-------~~~~~~~~~~L 150 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEK------SLKGAALWDEV-------KDRLHDSALSL 150 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHH------HHHHhcCchhh-------HHHhhcChhhC
Confidence 77889999999999999999999974321 1 11 11222 45555543322 22344556789
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||||||++||||++.+|+++||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g 230 (253)
T PRK14261 151 SGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFD 230 (253)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcC
Confidence 999999999999999999999999999999999999999999988777899999999999975 9999999999999999
Q ss_pred ChhHHhhcCChHHHH
Q 000845 1227 EPKKLLRRQDSLFAQ 1241 (1255)
Q Consensus 1227 ~~~eLl~~~~~~f~~ 1241 (1255)
+++++..++...+.+
T Consensus 231 ~~~~~~~~~~~~~~~ 245 (253)
T PRK14261 231 KTTQIFENPHEELTE 245 (253)
T ss_pred CHHHHHhCCCcHHHH
Confidence 999998765444444
No 243
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=359.93 Aligned_cols=218 Identities=23% Similarity=0.341 Sum_probs=179.4
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH-hhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD-LRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~-lR~~i 1081 (1255)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... .|+.+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999953 46999999999999999999999999999999999999999999999999998887654 67889
Q ss_pred EEEccCCccCCC-chhhhcccCCC-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQ-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
+|+||++.+|.+ |+++|+..... ...++..+. ..++++.. + +++.........||||||||++|||
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~--~~~~l~~~---------~-~l~~~~~~~~~~LS~G~~qrl~la~ 150 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQER--IKWVYELF---------P-RLHERRIQRAGTMSGGEQQMLAIGR 150 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHH--HHHHHHHH---------H-HHHHHHhCchhhCCHHHHHHHHHHH
Confidence 999999999985 99999974221 122222110 00122222 1 1111122334679999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|++++|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 151 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 151 ALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred HHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 9999999999999999999999999999998764 47999999999998765 999999999999999999999753
No 244
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.7e-40 Score=357.88 Aligned_cols=200 Identities=23% Similarity=0.357 Sum_probs=172.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChH---Hhhcc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLY---DLRSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~---~lR~~ 1080 (1255)
++++|++++|+. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..++.. .+|+.
T Consensus 2 l~~~~l~~~~~~-~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPG-GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCC-CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 689999999952 34699999999999999999999999999999999999999999999999999887643 46789
Q ss_pred cEEEccCCccCC-CchhhhcccCC---CCC----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1081 LGIIPQDPTLFS-GSVRYNLDPLS---QFT----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1081 i~~vpQdp~Lf~-gTIr~Nl~~~~---~~s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
++|+||+|.+|. .|+++|+.... ... ++++.+ +++..++.+.....| .+||||||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LS~G~~ 143 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGA------ALRQVGLEHKADAFP-----------EQLSGGEQ 143 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHH------HHHHcCChhhhhCCh-----------hhCCHHHH
Confidence 999999999986 59999996421 111 233444 777777765544333 47999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCE
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGK 1221 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1221 (1255)
||++|||||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 144 qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 144 QRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999999999864 47899999999999987 89999999985
No 245
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6e-40 Score=357.24 Aligned_cols=201 Identities=26% Similarity=0.383 Sum_probs=171.3
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh---HHhhcc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL---YDLRSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~---~~lR~~ 1080 (1255)
++++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 469999999999999999999999999999999999999999999999999987764 347889
Q ss_pred cEEEccCCccCCC-chhhhcccCC---CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1081 LGIIPQDPTLFSG-SVRYNLDPLS---QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1081 i~~vpQdp~Lf~g-TIr~Nl~~~~---~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
++|+||+|.+|.. |+++|+.... ..+. +++.+ +++.+++.+..... ..+||||||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~-----------~~~LS~G~~ 142 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPA------ALELVGLSHKHRAL-----------PAELSGGEQ 142 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHH------HHHHcCCHHHhhCC-----------hhhcCHHHH
Confidence 9999999999985 9999996421 1222 22333 66666665544332 247999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEE
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKL 1222 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1222 (1255)
||++||||++++|+|+||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 143 qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 143 QRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999999998864 47899999999999986 899999999974
No 246
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=364.02 Aligned_cols=223 Identities=25% Similarity=0.372 Sum_probs=186.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCCCC-hHH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITTIG-LYD 1076 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~i~-~~~ 1076 (1255)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 5899999999963 4699999999999999999999999999999999999985 7999999999998763 456
Q ss_pred hhcccEEEccCCccCCCchhhhcccCC----CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1077 LRSNLGIIPQDPTLFSGSVRYNLDPLS----QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1077 lR~~i~~vpQdp~Lf~gTIr~Nl~~~~----~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
+|++++|+||+|.+|+.|+++|+.... ..+++++.+. ..++++.+++.+.. ++.+.....+||||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~--~~~~l~~~~l~~~~-------~~~l~~~~~~LSgGq~ 169 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGV--AQARLTEVGLWDAV-------KDRLSDSPFRLSGGQQ 169 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHH--HHHHHHHcCCCchh-------hhHhhCCcccCCHHHH
Confidence 789999999999999999999997421 1233333220 01134455543322 2234455678999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 170 qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 249 (276)
T PRK14271 170 QLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQL 249 (276)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667899999999999876 999999999999999999999
Q ss_pred hhcCC
Q 000845 1232 LRRQD 1236 (1255)
Q Consensus 1232 l~~~~ 1236 (1255)
.+.+.
T Consensus 250 ~~~~~ 254 (276)
T PRK14271 250 FSSPK 254 (276)
T ss_pred HhCcC
Confidence 87643
No 247
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=370.54 Aligned_cols=222 Identities=24% Similarity=0.372 Sum_probs=181.0
Q ss_pred CceEEEEEEEEEeCCCC---CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCC----C-
Q 000845 1001 TGKVEIYDLQIRYRPNA---PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITT----I- 1072 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~---~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~----i- 1072 (1255)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46899999999996432 259999999999999999999999999999999999999999999999999852 2
Q ss_pred ChHHhhcccEEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1073 GLYDLRSNLGIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1073 ~~~~lR~~i~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
+...+|++|+|+||+| .+|..|+++|+.+.. ....++..+. ..++++..++. +.........|
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~--~~~ll~~~~L~----------~~~~~~~~~~L 151 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK--VPELLKLVQLP----------EDYVKRSPFEL 151 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH--HHHHHHHcCCC----------hhHhcCChhhC
Confidence 3567888999999998 477889999997421 1222222110 00133333331 11223345689
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEE
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1224 (1255)
|||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++
T Consensus 152 S~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~ 231 (289)
T PRK13645 152 SGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVIS 231 (289)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999988653 7899999999999865 99999999999999
Q ss_pred EcChhHHhhc
Q 000845 1225 YDEPKKLLRR 1234 (1255)
Q Consensus 1225 ~G~~~eLl~~ 1234 (1255)
.|+++++...
T Consensus 232 ~g~~~~~~~~ 241 (289)
T PRK13645 232 IGSPFEIFSN 241 (289)
T ss_pred eCCHHHHhcC
Confidence 9999988654
No 248
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=334.43 Aligned_cols=220 Identities=26% Similarity=0.407 Sum_probs=186.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH-hhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD-LRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~-lR~~i 1081 (1255)
-++++|++..|.. -.+|++|||++++||.++++||||+||||++++|+|+.++.+|+|.++|.||...+++. .|..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 3789999999964 46999999999999999999999999999999999999999999999999999999887 58889
Q ss_pred EEEccCCccCCC-chhhhcccCCCC-ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQF-TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~~-sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
+||||...+|+. ||.|||...... .+++-++ ..+++...-+| -|.......+.+|||||+|.+||||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----------~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaR 149 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----------RDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIAR 149 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhccccccccc----------ccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHH
Confidence 999999999976 999999743221 1111111 01222222233 2444555667899999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcC
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
||+.+|++|+|||||.+|-|.--+.|.++|++..+ +.||+.|-++.....+ +||.+||++|+|+..|+.+||.+++
T Consensus 150 ALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 150 ALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred HHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 99999999999999999999999999999998874 5699999999999876 9999999999999999999999874
No 249
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1e-39 Score=341.86 Aligned_cols=172 Identities=36% Similarity=0.624 Sum_probs=161.7
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+....++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999996544569999999999999999999999999999999999999999999999999999988889999999
Q ss_pred EccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHcc
Q 000845 1084 IPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLR 1163 (1255)
Q Consensus 1084 vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~ 1163 (1255)
++|+|.+|++|+++|+ ||||||||++||||+++
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------------LS~G~~qrv~la~al~~ 113 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------------LSGGQRQRLGLARALYG 113 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------------cCHHHHHHHHHHHHHhc
Confidence 9999999999999886 99999999999999999
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEEEeCCEE
Q 000845 1164 RRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLSMSDGKL 1222 (1255)
Q Consensus 1164 ~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~i 1222 (1255)
+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++
T Consensus 114 ~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 114 NPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred CCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999999999998864 47899999999999988999999999975
No 250
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-40 Score=360.07 Aligned_cols=212 Identities=24% Similarity=0.384 Sum_probs=181.9
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+. .++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++|
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 578999999963 369999999999999999999999999999999999999999999999999987654 3688999
Q ss_pred EccCCccCCC-chhhhcccCC---CCC----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLS---QFT----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~---~~s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||+|.+|.+ |+++|+.+.. ..+ ++++.+ +++..++.++....| .+||+|||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~lS~G~~qrl 139 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAE------ALDLVQLEGYANRKP-----------SQLSGGQQQRV 139 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHH------HHHHcCCchhhcCCh-----------hhCCHHHHHHH
Confidence 9999999976 9999996321 111 122333 566666665544433 57999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
+||||++++|+++||||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 140 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~ 219 (232)
T cd03300 140 AIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIY 219 (232)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHH
Confidence 999999999999999999999999999999999988653 7899999999999876 8999999999999999999998
Q ss_pred hcCC
Q 000845 1233 RRQD 1236 (1255)
Q Consensus 1233 ~~~~ 1236 (1255)
+.+.
T Consensus 220 ~~~~ 223 (232)
T cd03300 220 EEPA 223 (232)
T ss_pred hCCc
Confidence 7543
No 251
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.1e-39 Score=372.45 Aligned_cols=216 Identities=24% Similarity=0.403 Sum_probs=181.0
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++|++++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999963 4599999999999999999999999999999999999999999999999998754 356789999
Q ss_pred EEccCCccCC-CchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1083 IIPQDPTLFS-GSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1083 ~vpQdp~Lf~-gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
|+||++.+|. .|+++|+..+. ..+.++..+. ..++++.+++.+. +++.+ ..||||||||++||
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~ll~~~~l~~~-------~~~~~----~~LSgG~~qrv~la 147 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAV--IPSLLEFARLESK-------ADVRV----ALLSGGMKRRLTLA 147 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHH--HHHHHHHCCChhH-------hcCch----hhCCHHHHHHHHHH
Confidence 9999999885 59999996321 1233322210 0114555554332 33333 47999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 148 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 148 RALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999999999998864 47899999999999976 999999999999999999999754
No 252
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=361.51 Aligned_cols=213 Identities=23% Similarity=0.367 Sum_probs=183.2
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++.++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 3789999999963 46999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCcc-CCCchhhhcccCCC---CC----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1083 IIPQDPTL-FSGSVRYNLDPLSQ---FT----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1083 ~vpQdp~L-f~gTIr~Nl~~~~~---~s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
|+||++.+ +..|+++|+..... .+ ++.+.+ +++.+++.+...+ ....||||||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~-----------~~~~LSgGe~qr 142 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAA------ALAQVDLAHLAGR-----------DYPQLSGGEQQR 142 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHH------HHHHcCCHhHhcC-----------CcccCCHHHHHH
Confidence 99999987 67799999964321 11 122333 6666666543322 335799999999
Q ss_pred HHHHHHHc------cCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEE
Q 000845 1155 IGLGRVVL------RRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1155 l~lARAlL------~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1225 (1255)
++|||||+ .+|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.
T Consensus 143 v~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~ 222 (258)
T PRK13548 143 VQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVAD 222 (258)
T ss_pred HHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEee
Confidence 99999999 5999999999999999999999999998865 47899999999999875 999999999999999
Q ss_pred cChhHHhhc
Q 000845 1226 DEPKKLLRR 1234 (1255)
Q Consensus 1226 G~~~eLl~~ 1234 (1255)
|+++++...
T Consensus 223 ~~~~~~~~~ 231 (258)
T PRK13548 223 GTPAEVLTP 231 (258)
T ss_pred CCHHHHhCh
Confidence 999998753
No 253
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=368.72 Aligned_cols=220 Identities=29% Similarity=0.436 Sum_probs=180.8
Q ss_pred eEEEEEEEEEeCCCC---CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCC----ChH
Q 000845 1003 KVEIYDLQIRYRPNA---PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTI----GLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~---~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i----~~~ 1075 (1255)
.|+++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996422 3699999999999999999999999999999999999999999999999998653 245
Q ss_pred HhhcccEEEccCC--ccCCCchhhhcccC---CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1076 DLRSNLGIIPQDP--TLFSGSVRYNLDPL---SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp--~Lf~gTIr~Nl~~~---~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
..|+.++|+||+| .+|..|+++|+.+. ...+.++..+ ...++++.+++.. ........+||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~~gL~~----------~~~~~~~~~LSgG 149 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE--KALKWLKKVGLSE----------DLISKSPFELSGG 149 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCCCh----------hHhhCCcccCCHH
Confidence 6788999999998 57888999999631 1122222211 0012455555431 1223334689999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcCh
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1228 (1255)
||||++|||||+.+|++|||||||++||+++.+.+.+.|++.. .+.|||++||+++.+.. ||+|++|++|++++.|++
T Consensus 150 q~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (287)
T PRK13641 150 QMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASP 229 (287)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999998864 47899999999999865 999999999999999999
Q ss_pred hHHhhc
Q 000845 1229 KKLLRR 1234 (1255)
Q Consensus 1229 ~eLl~~ 1234 (1255)
+++.+.
T Consensus 230 ~~~~~~ 235 (287)
T PRK13641 230 KEIFSD 235 (287)
T ss_pred HHHhcC
Confidence 998753
No 254
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=360.08 Aligned_cols=203 Identities=25% Similarity=0.347 Sum_probs=175.6
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++
T Consensus 12 ~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i~ 84 (257)
T PRK11247 12 PLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDTR 84 (257)
T ss_pred cEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCceE
Confidence 5999999999963 46999999999999999999999999999999999999999999999998763 4678999
Q ss_pred EEccCCccCC-CchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1083 IIPQDPTLFS-GSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1083 ~vpQdp~Lf~-gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
|+||+|.+|+ .|+++|+.+.. ...++++.+ +++..++.+.... ...+||||||||++||||
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~------~l~~~gl~~~~~~-----------~~~~LSgGqkqrl~lara 147 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQ------ALAAVGLADRANE-----------WPAALSGGQKQRVALARA 147 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHH------HHHHcCChhHhcC-----------ChhhCCHHHHHHHHHHHH
Confidence 9999999987 69999997532 112344444 6777777654332 335799999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChh
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPK 1229 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1229 (1255)
|+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 148 L~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 148 LIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999999999999998764 37899999999999865 9999999999999988754
No 255
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=365.39 Aligned_cols=213 Identities=22% Similarity=0.353 Sum_probs=185.0
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
..|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++.+
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999963 4699999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEccCCccCC-CchhhhcccCC--C------CC---hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCCh
Q 000845 1082 GIIPQDPTLFS-GSVRYNLDPLS--Q------FT---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSM 1149 (1255)
Q Consensus 1082 ~~vpQdp~Lf~-gTIr~Nl~~~~--~------~s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1149 (1255)
+|+||++.+|. .|+++|+.+.. . .. ++.+.+ +++..++.+... .....|||
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~-----------~~~~~LS~ 146 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTK------AMQATGITHLAD-----------QSVDTLSG 146 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHH------HHHHcCCHHHhc-----------CCcccCCh
Confidence 99999998875 59999997431 1 11 122333 666666655432 23467999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||||++||||++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g 226 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQG 226 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999988643 7899999999998866 9999999999999999
Q ss_pred ChhHHhh
Q 000845 1227 EPKKLLR 1233 (1255)
Q Consensus 1227 ~~~eLl~ 1233 (1255)
+++++..
T Consensus 227 ~~~~~~~ 233 (265)
T PRK10253 227 APKEIVT 233 (265)
T ss_pred CHHHHhh
Confidence 9999875
No 256
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.4e-39 Score=375.61 Aligned_cols=210 Identities=22% Similarity=0.307 Sum_probs=175.7
Q ss_pred CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCE----eCCCCChHHhh----cccEEEccCCc
Q 000845 1018 PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGL----DITTIGLYDLR----SNLGIIPQDPT 1089 (1255)
Q Consensus 1018 ~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~----di~~i~~~~lR----~~i~~vpQdp~ 1089 (1255)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. |+...+...+| ++|+||||++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 45899999999999999999999999999999999999999999999996 67777665543 57999999999
Q ss_pred cCC-CchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCC
Q 000845 1090 LFS-GSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRR 1165 (1255)
Q Consensus 1090 Lf~-gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~ 1165 (1255)
+|+ .|+++|+.+.. ..+.++..+ ...++++.++|.++....| .+||||||||++|||||+++|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~--~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P 183 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRK--RVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDA 183 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCC
Confidence 998 69999997421 122222111 0112677777765543332 469999999999999999999
Q ss_pred CeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcCChHHH
Q 000845 1166 QILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQDSLFA 1240 (1255)
Q Consensus 1166 ~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~~~f~ 1240 (1255)
+|||||||||+||+.+.+.+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|++++++.++...|.
T Consensus 184 ~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~ 261 (382)
T TIGR03415 184 DILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYV 261 (382)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHH
Confidence 99999999999999999999999988753 7899999999999855 999999999999999999999987655444
No 257
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=9.8e-40 Score=375.08 Aligned_cols=216 Identities=24% Similarity=0.425 Sum_probs=181.4
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++||+++|+. ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++|+
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999953 45999999999999999999999999999999999999999999999999997654 56789999
Q ss_pred EEccCCccCC-CchhhhcccCCC---CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1083 IIPQDPTLFS-GSVRYNLDPLSQ---FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1083 ~vpQdp~Lf~-gTIr~Nl~~~~~---~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
|+||++.+|. .|+++|+..+.. .+.++..+. ..++++.+++. +..++.+ .+||||||||++||
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~ll~~~~L~-------~~~~~~~----~~LS~G~kqrv~lA 184 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV--IPSLLEFARLE-------SKADARV----SDLSGGMKRRLTLA 184 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH--HHHHHHHcCCc-------hhhCCCh----hhCCHHHHHHHHHH
Confidence 9999999874 599999974321 222222110 00134444433 2334444 47999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 185 ~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 185 RALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999999999998864 47899999999999976 999999999999999999999764
No 258
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=361.22 Aligned_cols=222 Identities=19% Similarity=0.296 Sum_probs=188.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCCC--ChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITTI--GLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~i--~~~ 1075 (1255)
.+.+++.+++|.. .++|+|+||+|+|||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999953 4699999999999999999999999999999999999986 799999999998643 444
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCCC---C---ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCCh
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLSQ---F---TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSM 1149 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~---~---sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1149 (1255)
.+|+.++|+||+|.+|..|+++|+..... . ..+++.+ +++.+++.+.+.. ..++...+|||
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~i~~-------~~~~~~~~LS~ 152 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKH------ALQGAALWDEVKD-------KLKVSGLSLSG 152 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHH------HHHHcCCchhhhh-------hhhCCcccCCH
Confidence 67889999999999999999999974321 1 1123333 7777777555432 22345568999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEe--------CC
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMS--------DG 1220 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~--------~G 1220 (1255)
|||||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|+ +|
T Consensus 153 G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G 232 (261)
T PRK14263 153 GQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTG 232 (261)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCc
Confidence 9999999999999999999999999999999999999999988777899999999999876 99999996 89
Q ss_pred EEEEEcChhHHhhcCChHH
Q 000845 1221 KLVEYDEPKKLLRRQDSLF 1239 (1255)
Q Consensus 1221 ~ive~G~~~eLl~~~~~~f 1239 (1255)
++++.|+++++++++...+
T Consensus 233 ~i~~~g~~~~~~~~~~~~~ 251 (261)
T PRK14263 233 YLVEMGPTAQIFQNPREQL 251 (261)
T ss_pred eEEEeCCHHHHHhCCCcHH
Confidence 9999999999987654333
No 259
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=360.00 Aligned_cols=217 Identities=24% Similarity=0.419 Sum_probs=180.8
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH-hhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD-LRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~-lR~~i 1081 (1255)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3889999999953 46999999999999999999999999999999999999999999999999998877644 57889
Q ss_pred EEEccCCccCCC-chhhhcccCCC----CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQ----FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~----~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
+|+||++.+|.+ |+++|+..... .+.++..+ ...+.+..+ |++.........||||||||++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----------~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~ 147 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRED-----------RANELMEEF--HIEHLRDSMGQSLSGGERRRVE 147 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHH-----------HHHHHHHHc--CCHHHhhcchhhCCHHHHHHHH
Confidence 999999999885 99999975321 11111111 112233322 3444444455689999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||++++|++|||||||++||+.+.+.+.+.+++.. .++|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 148 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 148 IARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 9999999999999999999999999999999998764 47899999999988765 899999999999999999998753
No 260
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.4e-39 Score=370.77 Aligned_cols=215 Identities=23% Similarity=0.380 Sum_probs=182.9
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999953 469999999999999999999999999999999999999999999999999977 44678899999
Q ss_pred EccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
+||+|.+|.+ |++||+.... ....++..+ ...++++..++.+. ......+||||||||++|||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrv~la~ 146 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ--RVEEMIELVGLRPE-----------QHKKIGQLSKGYRQRVGLAQ 146 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHCCCchH-----------hcCchhhCCHHHHHHHHHHH
Confidence 9999999987 9999996422 112221111 00114555554433 33344679999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||+++|++|||||||++||+.+.+.+++.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 147 al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 147 ALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 999999999999999999999999999999988778999999999999977 999999999999999999998764
No 261
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.4e-39 Score=357.18 Aligned_cols=210 Identities=26% Similarity=0.409 Sum_probs=179.9
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+. +++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999963 469999999999999999999999999999999999999999999999999986653 4788999
Q ss_pred EccCCccCCC-chhhhcccCC---CCC----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLS---QFT----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~---~~s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||+|.+|++ |+++|+.... ..+ ++++.+ +++..++.++..+ ...+||+||+||+
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~-----------~~~~lS~G~~qrl 139 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEE------LLELVQLEGLGDR-----------YPNQLSGGQRQRV 139 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHH------HHHHcCCHhHhhC-----------ChhhCCHHHHHHH
Confidence 9999999986 9999996421 111 122222 5566665544332 2357999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
+||||++++|+++||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++++
T Consensus 140 ~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 219 (237)
T TIGR00968 140 ALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVY 219 (237)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999987644 7899999999999876 9999999999999999999998
Q ss_pred hc
Q 000845 1233 RR 1234 (1255)
Q Consensus 1233 ~~ 1234 (1255)
+.
T Consensus 220 ~~ 221 (237)
T TIGR00968 220 DH 221 (237)
T ss_pred cC
Confidence 64
No 262
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-39 Score=362.36 Aligned_cols=220 Identities=20% Similarity=0.370 Sum_probs=186.1
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCC--CCh
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITT--IGL 1074 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~--i~~ 1074 (1255)
-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 19 SVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred ceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 36999999999963 4699999999999999999999999999999999999863 69999999999864 344
Q ss_pred HHhhcccEEEccCCccCCCchhhhcccCCC---C---ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1075 YDLRSNLGIIPQDPTLFSGSVRYNLDPLSQ---F---TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1075 ~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~---~---sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
..+|++|+|+||++.+|+.|+++|+..... . .++++.+ +++.+++.+.+.. ........||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~l~~-------~~~~~~~~LS 163 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVED------SLRRAAIWEEVKD-------KLKEKGTALS 163 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHH------HHHHcccchhhHH-------HhcCCcccCC
Confidence 567899999999999999999999964211 1 1222222 6677776544432 2233456899
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEe---------
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMS--------- 1218 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~--------- 1218 (1255)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||+|+|+++.+.. ||+|++|+
T Consensus 164 gGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~ 243 (274)
T PRK14265 164 GGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKR 243 (274)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeccccccccc
Confidence 99999999999999999999999999999999999999999988778999999999999975 99999997
Q ss_pred CCEEEEEcChhHHhhcCC
Q 000845 1219 DGKLVEYDEPKKLLRRQD 1236 (1255)
Q Consensus 1219 ~G~ive~G~~~eLl~~~~ 1236 (1255)
+|++++.|+++++..++.
T Consensus 244 ~G~~~~~g~~~~~~~~~~ 261 (274)
T PRK14265 244 RGKLVEFSPTEQMFGSPQ 261 (274)
T ss_pred CceEEEeCCHHHHHhCCC
Confidence 899999999999987644
No 263
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=362.16 Aligned_cols=225 Identities=22% Similarity=0.360 Sum_probs=187.1
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC-----CCEEEEcCEeCCC--CCh
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT-----GGKIIIDGLDITT--IGL 1074 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~-----~G~I~idG~di~~--i~~ 1074 (1255)
+.|+++||+++|+. +.+|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 47999999999953 35999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHhhcccEEEccCCccCCCchhhhcccCC---C-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1075 YDLRSNLGIIPQDPTLFSGSVRYNLDPLS---Q-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1075 ~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
..+|+.++|+||++.+|..|++||+.... . .++.+.++ ...++++.+++.+++.. ..+.....||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgG 154 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDD--IVESALKDADLWDEIKH-------KIHKSALDLSGG 154 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHH--HHHHHHHHcCCcchhhh-------HhcCCcccCCHH
Confidence 57789999999999999999999996421 1 12222111 00126777776554432 233455689999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeC-----CEE
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSD-----GKL 1222 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~-----G~i 1222 (1255)
||||++||||++++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++
T Consensus 155 q~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i 234 (261)
T PRK14258 155 QQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQL 234 (261)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceE
Confidence 9999999999999999999999999999999999999998753 47999999999999876 899999999 999
Q ss_pred EEEcChhHHhhcCCh
Q 000845 1223 VEYDEPKKLLRRQDS 1237 (1255)
Q Consensus 1223 ve~G~~~eLl~~~~~ 1237 (1255)
++.|+++++..++..
T Consensus 235 ~~~~~~~~~~~~~~~ 249 (261)
T PRK14258 235 VEFGLTKKIFNSPHD 249 (261)
T ss_pred EEeCCHHHHHhCCCC
Confidence 999999999876544
No 264
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=360.19 Aligned_cols=223 Identities=23% Similarity=0.360 Sum_probs=185.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCC-CCChHH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDIT-TIGLYD 1076 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~-~i~~~~ 1076 (1255)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4899999999963 4699999999999999999999999999999999999986 5999999999986 456677
Q ss_pred hhcccEEEccCCccCCCchhhhcccCC---CCC-hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1077 LRSNLGIIPQDPTLFSGSVRYNLDPLS---QFT-DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1077 lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~s-d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
+|+.++|+||+|.+|..|+++|+.... ... +++..+ ...++++.+++.+.+. .........||||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~ 151 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDE--VVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQ 151 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHH--HHHHHHHHcCCchhhh-------HHhhcCcccCCHHHH
Confidence 899999999999999999999997421 111 111111 0011555566544332 223344568999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
||++||||++.+|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 152 QRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVI 231 (249)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999887 999999999999999999998
Q ss_pred hhcCC
Q 000845 1232 LRRQD 1236 (1255)
Q Consensus 1232 l~~~~ 1236 (1255)
..++.
T Consensus 232 ~~~~~ 236 (249)
T PRK14253 232 FSNPK 236 (249)
T ss_pred HcCCC
Confidence 76543
No 265
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.2e-39 Score=356.19 Aligned_cols=206 Identities=23% Similarity=0.335 Sum_probs=175.7
Q ss_pred eEEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH---h
Q 000845 1003 KVEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD---L 1077 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~---l 1077 (1255)
.|+++|++++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 589999999996432 25999999999999999999999999999999999999999999999999998877654 2
Q ss_pred -hcccEEEccCCccCCC-chhhhcccC---CCCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1078 -RSNLGIIPQDPTLFSG-SVRYNLDPL---SQFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1078 -R~~i~~vpQdp~Lf~g-TIr~Nl~~~---~~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
++.++|+||+|.+|.+ |+++|+... ..... +++.+ +++..++.+.....| ..||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LS 148 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKA------LLEQLGLGKRLDHLP-----------AQLS 148 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHH------HHHHcCCHhHhhCCh-----------hhCC
Confidence 3679999999999885 999999632 11221 22333 677777765544333 4799
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhhcCEEEEEeCCEEEEE
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMDCNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1225 (1255)
||||||++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|+++|.
T Consensus 149 ~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 149 GGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999999999987642 7899999999999888999999999999875
No 266
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-39 Score=352.24 Aligned_cols=200 Identities=25% Similarity=0.387 Sum_probs=172.1
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+. .. .|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~--~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGE--QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCC--Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 578999999953 22 39999999999999999999999999999999999999999999999987654 4678999
Q ss_pred EccCCccCCC-chhhhcccCCC-------CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLSQ-------FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~~-------~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||+|.+|.+ |+++|+.+... ..++++.+ +++.+++.+.....| .+||||||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LS~G~~qrv 137 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEV------ALARVGLAGLEKRLP-----------GELSGGERQRV 137 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHH------HHHHcCCHHHHhCCc-----------ccCCHHHHHHH
Confidence 9999999986 99999974211 11233444 788888766655443 47999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
+||||++++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 138 ~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 138 ALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999999999864 37899999999999976 9999999999998865
No 267
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=362.09 Aligned_cols=222 Identities=22% Similarity=0.393 Sum_probs=182.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCC--CChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITT--IGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~--i~~~ 1075 (1255)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS--FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC--EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 4899999999963 3599999999999999999999999999999999999974 69999999999853 4456
Q ss_pred HhhcccEEEccCCccCC-CchhhhcccC----CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1076 DLRSNLGIIPQDPTLFS-GSVRYNLDPL----SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~-gTIr~Nl~~~----~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
.+|+.++|+||++.+|. .|+++|+... +..+.++..+ ...++++.+++.+.+. ........+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 152 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDE--LVEKSLRGANLWNEVK-------DRLDKPGGGLSGG 152 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHH--HHHHHHHHcCCchhhh-------hHhhCCcccCCHH
Confidence 78899999999999997 4999999632 1111211111 0012566666643322 2233445689999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEe------CCEEE
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMS------DGKLV 1223 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~------~G~iv 1223 (1255)
||||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|+ +|+|+
T Consensus 153 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~ 232 (258)
T PRK14241 153 QQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLV 232 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEE
Confidence 999999999999999999999999999999999999999987667899999999999865 99999997 89999
Q ss_pred EEcChhHHhhcC
Q 000845 1224 EYDEPKKLLRRQ 1235 (1255)
Q Consensus 1224 e~G~~~eLl~~~ 1235 (1255)
+.|++++++.++
T Consensus 233 ~~~~~~~~~~~~ 244 (258)
T PRK14241 233 EIDDTEKIFSNP 244 (258)
T ss_pred ecCCHHHHHhCc
Confidence 999999998654
No 268
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=365.60 Aligned_cols=227 Identities=22% Similarity=0.340 Sum_probs=184.8
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCCC--Ch
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITTI--GL 1074 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~i--~~ 1074 (1255)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 38 ~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 38 PHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred eEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 46999999999953 359999999999999999999999999999999999864 4999999999998643 33
Q ss_pred HHhhcccEEEccCCccCCCchhhhcccCC---CC-ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1075 YDLRSNLGIIPQDPTLFSGSVRYNLDPLS---QF-TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1075 ~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~---~~-sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
..+|++++|+||+|.+|.+|+++|+.... .. +.++..+ ...++++.+++.+.+. + ........||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~l~---~----~~~~~~~~LSgG 186 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEE--IVEKSLRKAALWDEVS---D----RLDKNALGLSGG 186 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHH--HHHHHHHHhCCccchh---h----HhhCChhhCCHH
Confidence 45788999999999999999999997421 11 1111111 0011555555532221 1 123345679999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChh
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPK 1229 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1229 (1255)
||||++|||||+++|++|||||||++||+++.+.+.+.|++..+++|||++||+++.+.+ ||+|++|++|++++.|+++
T Consensus 187 q~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~ 266 (286)
T PRK14275 187 QQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTA 266 (286)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999987667899999999999876 9999999999999999999
Q ss_pred HHhhcCChHH
Q 000845 1230 KLLRRQDSLF 1239 (1255)
Q Consensus 1230 eLl~~~~~~f 1239 (1255)
++.+++...+
T Consensus 267 ~~~~~~~~~~ 276 (286)
T PRK14275 267 QLFTNPKDRM 276 (286)
T ss_pred HHHhCCCcHH
Confidence 9987654433
No 269
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=365.41 Aligned_cols=216 Identities=25% Similarity=0.396 Sum_probs=180.3
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCC--CCChHHhhccc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDIT--TIGLYDLRSNL 1081 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~--~i~~~~lR~~i 1081 (1255)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|++|
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 689999999953 45999999999999999999999999999999999999999999999999985 33456778899
Q ss_pred EEEccCCc--cCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1082 GIIPQDPT--LFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1082 ~~vpQdp~--Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
+|+||+|. +|..|+.+|+.... ..+.++..+ ...++++.+++.++.. ....+||||||||++
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~ 146 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITR--RVDEALTLVDAQHFRH-----------QPIQCLSHGQKKRVA 146 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCCHhHhc-----------CCchhCCHHHHHHHH
Confidence 99999985 57789999986421 122222211 0012566666654422 233579999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 147 laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 147 IAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999998864 47899999999999965 999999999999999999998764
No 270
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-39 Score=371.85 Aligned_cols=226 Identities=19% Similarity=0.318 Sum_probs=185.1
Q ss_pred eEEEEEEEEEeCC--CCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC----CCCCEEEEcCEeCCCCChHH
Q 000845 1003 KVEIYDLQIRYRP--NAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE----PTGGKIIIDGLDITTIGLYD 1076 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~--~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~----~~~G~I~idG~di~~i~~~~ 1076 (1255)
-++++|++++|+. +...+|+||||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||+++.+++...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3899999999953 22469999999999999999999999999999999999986 58999999999999888766
Q ss_pred hh----cccEEEccCCcc--CC-Cchhhhccc-C------CC-CC-----hHHHHhccCchhHHHhccHHHHHHhhhcCc
Q 000845 1077 LR----SNLGIIPQDPTL--FS-GSVRYNLDP-L------SQ-FT-----DQEIWEVTIPSQVLEKCQLREVIQEKKEGL 1136 (1255)
Q Consensus 1077 lR----~~i~~vpQdp~L--f~-gTIr~Nl~~-~------~~-~s-----d~ei~~~~~~~~al~~~~l~~~i~~lp~gl 1136 (1255)
++ +.|+||||+|.. +. -||.+|+.. . +. .. ++++.+ +++.++|.+.-.
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~L~~~gL~~~~~------ 150 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIE------LLHRVGIKDHKD------ 150 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHH------HHHHCCCCChHH------
Confidence 53 479999999963 33 488888741 0 00 01 122333 677777753211
Q ss_pred cchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCE
Q 000845 1137 DSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNM 1213 (1255)
Q Consensus 1137 dt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~Dr 1213 (1255)
........||||||||++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|+|+|||+++.+.. |||
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dr 228 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADK 228 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCE
Confidence 11223357999999999999999999999999999999999999999999998653 7899999999999976 999
Q ss_pred EEEEeCCEEEEEcChhHHhhcCChHHHHH
Q 000845 1214 VLSMSDGKLVEYDEPKKLLRRQDSLFAQL 1242 (1255)
Q Consensus 1214 I~vl~~G~ive~G~~~eLl~~~~~~f~~l 1242 (1255)
|+||++|+|+|.|+++++.+++...|.+.
T Consensus 229 i~vm~~G~ive~g~~~~i~~~p~~~y~~~ 257 (330)
T PRK15093 229 INVLYCGQTVETAPSKELVTTPHHPYTQA 257 (330)
T ss_pred EEEEECCEEEEECCHHHHHhCCCCHHHHH
Confidence 99999999999999999998776667653
No 271
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=365.67 Aligned_cols=217 Identities=25% Similarity=0.422 Sum_probs=181.1
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCC--CChHHhhccc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITT--IGLYDLRSNL 1081 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~--i~~~~lR~~i 1081 (1255)
|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++. .+...+|++|
T Consensus 2 l~~~~l~~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPD-GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 689999999963 3459999999999999999999999999999999999999999999999999852 2345678999
Q ss_pred EEEccCC--ccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1082 GIIPQDP--TLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1082 ~~vpQdp--~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
+|+||+| .+|..|+++|+.... ..+.++..+ ...++++.+++.++.. . ...+||||||||++
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~--~~~~~l~~~~L~~~~~-------~----~~~~LS~Gq~qrv~ 147 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK--RVKEALKAVGMEGFEN-------K----PPHHLSGGQKKRVA 147 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHCCCchhhc-------C----ChhhCCHHHHHHHH
Confidence 9999998 578899999996321 122222211 0012666666654322 2 23579999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||++.+|++|||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 148 laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 148 IAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999865 37899999999999875 999999999999999999998764
No 272
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=9.9e-40 Score=354.94 Aligned_cols=197 Identities=28% Similarity=0.417 Sum_probs=166.4
Q ss_pred EEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEE
Q 000845 1005 EIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGII 1084 (1255)
Q Consensus 1005 ~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~v 1084 (1255)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 46899999953 45999999999999999999999999999999999999999999999998764 468899999
Q ss_pred ccCCcc---CCCchhhhcccCCCC--------C---hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1085 PQDPTL---FSGSVRYNLDPLSQF--------T---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1085 pQdp~L---f~gTIr~Nl~~~~~~--------s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
||+|.+ |+.|+++|+...... . ++++.+ +++..++.+.... ...+||||
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~-----------~~~~LSgG 136 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDE------ALERVGLSELADR-----------QIGELSGG 136 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHH------HHHHcCCHHHHhC-----------CcccCCHH
Confidence 999986 668999999642110 1 122333 6777777654432 23579999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
||||++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 137 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 137 QQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999999999998865 57899999999999976 8999999986 56654
No 273
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=360.11 Aligned_cols=229 Identities=25% Similarity=0.384 Sum_probs=187.8
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcC------EeCCCCChHH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDG------LDITTIGLYD 1076 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG------~di~~i~~~~ 1076 (1255)
.++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+++...
T Consensus 10 ~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 10 VFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred heeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 5999999999953 4699999999999999999999999999999999999999997666655 6777777778
Q ss_pred hhcccEEEccCCccCCC-chhhhcccCC---CC-ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1077 LRSNLGIIPQDPTLFSG-SVRYNLDPLS---QF-TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1077 lR~~i~~vpQdp~Lf~g-TIr~Nl~~~~---~~-sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
+|++++|+||+|.+|.+ |+++|+.... .. .+++..+ ...++++..++.+.+. ......+..||+||
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~ 158 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKK--IVEECLRKVGLWKEVY-------DRLNSPASQLSGGQ 158 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHH--HHHHHHHHcCCCccch-------hhhcCCcccCCHHH
Confidence 89999999999999986 9999997421 11 2233321 0012555555543221 12233456799999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|||++||||++++|+++||||||++||..+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 159 ~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~ 238 (257)
T PRK14246 159 QQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNE 238 (257)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999999987777999999999999955 99999999999999999999
Q ss_pred HhhcCChHHHHH
Q 000845 1231 LLRRQDSLFAQL 1242 (1255)
Q Consensus 1231 Ll~~~~~~f~~l 1242 (1255)
+.+.+...|.+.
T Consensus 239 ~~~~~~~~~~~~ 250 (257)
T PRK14246 239 IFTSPKNELTEK 250 (257)
T ss_pred HHhCCCcHHHHH
Confidence 987765545443
No 274
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-40 Score=346.58 Aligned_cols=221 Identities=23% Similarity=0.392 Sum_probs=187.0
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCE---eCCCCChHHhhc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGL---DITTIGLYDLRS 1079 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~---di~~i~~~~lR~ 1079 (1255)
.|.++|++..|+. ..+++|||++|+.||.+|+.||||||||||+++|.|+..|++|.|.++|. |.++++. -.+
T Consensus 2 ~i~i~~~~~~~~~--~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~--~~R 77 (345)
T COG1118 2 SIRINNVKKRFGA--FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAV--RDR 77 (345)
T ss_pred ceeehhhhhhccc--ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccch--hhc
Confidence 3678888888853 45899999999999999999999999999999999999999999999999 7776433 347
Q ss_pred ccEEEccCCccCCC-chhhhcccCCC-----CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1080 NLGIIPQDPTLFSG-SVRYNLDPLSQ-----FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1080 ~i~~vpQdp~Lf~g-TIr~Nl~~~~~-----~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
+||+|.|+..||.- ||++||.++-+ .++.++.. ...+.|+.++|..+-+..| .+|||||||
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~--rv~elL~lvqL~~la~ryP-----------~QLSGGQrQ 144 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRA--RVEELLRLVQLEGLADRYP-----------AQLSGGQRQ 144 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHH--HHHHHHHHhcccchhhcCc-----------hhcChHHHH
Confidence 89999999999965 99999986532 22333322 1122577777766655554 479999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|+||||||.-.|++|+||||.++||..-.+.+++-|++.. -++|+++|||+.+.+.. ||||+||++|+|...|+|+|
T Consensus 145 RVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~e 224 (345)
T COG1118 145 RVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDE 224 (345)
T ss_pred HHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHH
Confidence 9999999999999999999999999999999999988764 37899999999999866 99999999999999999999
Q ss_pred HhhcCChHHH
Q 000845 1231 LLRRQDSLFA 1240 (1255)
Q Consensus 1231 Ll~~~~~~f~ 1240 (1255)
....|++.|-
T Consensus 225 v~~~P~s~fV 234 (345)
T COG1118 225 VYDHPASRFV 234 (345)
T ss_pred HhcCCCccce
Confidence 9998887763
No 275
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.7e-39 Score=357.47 Aligned_cols=212 Identities=24% Similarity=0.412 Sum_probs=171.6
Q ss_pred EEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh---HHhh
Q 000845 1004 VEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL---YDLR 1078 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~---~~lR 1078 (1255)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999995431 269999999999999999999999999999999999999999999999999988774 5678
Q ss_pred cccEEEccCC--ccC-CCchhhhcccC----CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1079 SNLGIIPQDP--TLF-SGSVRYNLDPL----SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1079 ~~i~~vpQdp--~Lf-~gTIr~Nl~~~----~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
++++|+||+| .++ ..|+++|+... ....+++..+. ...++++..++. +........+|||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-~~~~~l~~~~l~----------~~~~~~~~~~LS~G~ 150 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKE-AVLLLLVGVGLP----------EEVLNRYPHELSGGQ 150 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHH-HHHHHHHHCCCC----------hhHhhCCchhcCHHH
Confidence 8999999999 344 47999998631 11111111110 000133333331 123344556899999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||++||||++.+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 151 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 151 RQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 9999999999999999999999999999999999999988754 7899999999999985 9999999999998865
No 276
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-39 Score=353.72 Aligned_cols=208 Identities=23% Similarity=0.389 Sum_probs=180.3
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++||+++|+. . ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .++.++|
T Consensus 2 l~~~~l~~~~~~--~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHH--L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECC--c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 689999999963 2 249999999999999999999999999999999999999999999999887654 3678999
Q ss_pred EccCCccCCC-chhhhcccCC-C-C-----ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLS-Q-F-----TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~-~-~-----sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||+|.+|.+ |+++|+.... . . .++++.+ +++.+++.+.+...| ..||||||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LS~G~~qrv 138 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHA------IARQMGIEDLLARLP-----------GQLSGGQRQRV 138 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHH------HHHHcCcHHHHhCCc-----------ccCCHHHHHHH
Confidence 9999999986 9999997421 1 1 1233444 788888877665544 36999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
+||||++++|+++||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 139 ~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~ 218 (232)
T PRK10771 139 ALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELL 218 (232)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999988653 7899999999999876 8999999999999999999998
Q ss_pred hc
Q 000845 1233 RR 1234 (1255)
Q Consensus 1233 ~~ 1234 (1255)
..
T Consensus 219 ~~ 220 (232)
T PRK10771 219 SG 220 (232)
T ss_pred hC
Confidence 64
No 277
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-39 Score=366.55 Aligned_cols=220 Identities=24% Similarity=0.430 Sum_probs=185.4
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCCCEEEEcCEeCCCC--C
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-----PTGGKIIIDGLDITTI--G 1073 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-----~~~G~I~idG~di~~i--~ 1073 (1255)
...|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 446999999999963 469999999999999999999999999999999999986 6899999999998753 4
Q ss_pred hHHhhcccEEEccCCccCCCchhhhcccCCC---------------C-----ChHHHHhccCchhHHHhccHHHHHHhhh
Q 000845 1074 LYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQ---------------F-----TDQEIWEVTIPSQVLEKCQLREVIQEKK 1133 (1255)
Q Consensus 1074 ~~~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~---------------~-----sd~ei~~~~~~~~al~~~~l~~~i~~lp 1133 (1255)
...+|++++|+||++.+|++|+++|+..... . .++++.+ +++.+++.+.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~----- 189 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVER------SLRQAALWDE----- 189 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHH------HHHHcCCchh-----
Confidence 5678899999999999999999999974210 0 0112222 4555554332
Q ss_pred cCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cC
Q 000845 1134 EGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CN 1212 (1255)
Q Consensus 1134 ~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~D 1212 (1255)
++........+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++..++.|+|+|||+++.+.. ||
T Consensus 190 --~~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d 267 (305)
T PRK14264 190 --VNDRLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISD 267 (305)
T ss_pred --hhHHhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcC
Confidence 233445566789999999999999999999999999999999999999999999988777899999999999876 99
Q ss_pred EE-EEEeCCEEEEEcChhHHhhcC
Q 000845 1213 MV-LSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1213 rI-~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
+| ++|++|++++.|+++++.+.+
T Consensus 268 ~i~~~l~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 268 QTAVFLTGGELVEYDDTDKIFENP 291 (305)
T ss_pred EEEEEecCCEEEEeCCHHHHHhCc
Confidence 97 578999999999999998653
No 278
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3e-39 Score=362.55 Aligned_cols=226 Identities=25% Similarity=0.377 Sum_probs=186.1
Q ss_pred eEEEEEEEEEeCC-------CCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChH
Q 000845 1003 KVEIYDLQIRYRP-------NAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~-------~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~ 1075 (1255)
-|+++||+++|+. +..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 4899999999952 124699999999999999999999999999999999999999999999999999765555
Q ss_pred HhhcccEEEccCCc--cCCC-chhhhcccC---C-CCC----hHHHHhccCchhHHHhccHH-HHHHhhhcCccchhcCC
Q 000845 1076 DLRSNLGIIPQDPT--LFSG-SVRYNLDPL---S-QFT----DQEIWEVTIPSQVLEKCQLR-EVIQEKKEGLDSLVVQD 1143 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~--Lf~g-TIr~Nl~~~---~-~~s----d~ei~~~~~~~~al~~~~l~-~~i~~lp~gldt~v~e~ 1143 (1255)
..|++++|+||+|. ++.. |+.+|+... . ... ++++.+ +++.+++. +... . .
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~-------~----~ 146 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIE------TLRQVGLLPDHAS-------Y----Y 146 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHH------HHHHcCCChHHHh-------c----C
Confidence 66778999999985 4443 788887521 1 111 123333 67777763 3222 1 2
Q ss_pred CCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCC
Q 000845 1144 GANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDG 1220 (1255)
Q Consensus 1144 G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G 1220 (1255)
..+||||||||++||||++++|+||||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|
T Consensus 147 ~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G 226 (267)
T PRK15112 147 PHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQG 226 (267)
T ss_pred chhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 25799999999999999999999999999999999999999999999864 37899999999999987 9999999999
Q ss_pred EEEEEcChhHHhhcC-ChHHHHHHHH
Q 000845 1221 KLVEYDEPKKLLRRQ-DSLFAQLVKE 1245 (1255)
Q Consensus 1221 ~ive~G~~~eLl~~~-~~~f~~l~~~ 1245 (1255)
++++.|+++++.+.+ ...+++++..
T Consensus 227 ~i~~~~~~~~~~~~~~~~~~~~~~~~ 252 (267)
T PRK15112 227 EVVERGSTADVLASPLHELTKRLIAG 252 (267)
T ss_pred EEEecCCHHHHhcCCCCHHHHHHHHh
Confidence 999999999998764 3456667654
No 279
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.6e-39 Score=361.55 Aligned_cols=211 Identities=22% Similarity=0.348 Sum_probs=181.5
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 789999999953 469999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EccCCc-cCCCchhhhcccCCC--------CC---hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1084 IPQDPT-LFSGSVRYNLDPLSQ--------FT---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1084 vpQdp~-Lf~gTIr~Nl~~~~~--------~s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
+||+|. .+..|+++|+..... .. ++++.+ +++.+++.+.. ......|||||
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~-----------~~~~~~LS~G~ 142 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDR------ALARTELSHLA-----------DRDMSTLSGGE 142 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHH------HHHHcCcHhhh-----------cCCcccCCHHH
Confidence 999995 456799999964310 01 112333 56666654432 22345799999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChh
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA-NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPK 1229 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1229 (1255)
|||++||||++.+|+++||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 143 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 222 (256)
T TIGR03873 143 RQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPR 222 (256)
T ss_pred HHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHH
Confidence 9999999999999999999999999999999999999987643 6899999999999965 9999999999999999999
Q ss_pred HHhh
Q 000845 1230 KLLR 1233 (1255)
Q Consensus 1230 eLl~ 1233 (1255)
++..
T Consensus 223 ~~~~ 226 (256)
T TIGR03873 223 EVLT 226 (256)
T ss_pred HhhC
Confidence 8865
No 280
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=360.94 Aligned_cols=227 Identities=24% Similarity=0.366 Sum_probs=185.4
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC-----CCEEEEcCEeCCC--CChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT-----GGKIIIDGLDITT--IGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~-----~G~I~idG~di~~--i~~~ 1075 (1255)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.+++. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4789999999963 46999999999999999999999999999999999999874 8999999999875 3455
Q ss_pred HhhcccEEEccCCccCCC-chhhhcccC---CCC-ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1076 DLRSNLGIIPQDPTLFSG-SVRYNLDPL---SQF-TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~g-TIr~Nl~~~---~~~-sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
.+|+.++|+||+|.+|.+ |+++|+... ... .+++..+. ..+.++..++.+.+ +..++.. ..+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~--~~~~l~~~~l~~~l---~~~~~~~----~~~LS~G 152 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEV--AERSLRGAALWDEV---KDRLKTP----ATGLSGG 152 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHH--HHHHHHHcCcchhh---hhhhcCC----cccCCHH
Confidence 778899999999999985 999999632 111 22322220 00133444443322 2223333 4679999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChh
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPK 1229 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1229 (1255)
||||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.+ ||+|++|++|++++.|+++
T Consensus 153 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14272 153 QQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTD 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999987667999999999999986 8999999999999999999
Q ss_pred HHhhcCChHHH
Q 000845 1230 KLLRRQDSLFA 1240 (1255)
Q Consensus 1230 eLl~~~~~~f~ 1240 (1255)
+++.++...+.
T Consensus 233 ~~~~~~~~~~~ 243 (252)
T PRK14272 233 QLFTNPRDERT 243 (252)
T ss_pred HHHhCcCcHHH
Confidence 99877654443
No 281
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.9e-39 Score=354.96 Aligned_cols=209 Identities=24% Similarity=0.347 Sum_probs=178.6
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++||+++|.. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999953 45999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCCccCCCchhhhcccC----CCC-ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1083 IIPQDPTLFSGSVRYNLDPL----SQF-TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1083 ~vpQdp~Lf~gTIr~Nl~~~----~~~-sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
|+||+|.+|+.|+++|+... ... .++++.+ +++..++.+ +.......+||||||||++|
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~------~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~l 148 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLD------DLERFALPD----------TILTKNIAELSGGEKQRISL 148 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHH------HHHHcCCCh----------HHhcCCcccCCHHHHHHHHH
Confidence 99999999999999999642 111 1112222 455555432 22334456899999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhhcCEEEEEe-CCEEEEEcChh
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMDCNMVLSMS-DGKLVEYDEPK 1229 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~-~G~ive~G~~~ 1229 (1255)
||||+++|+++||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 149 IRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999999999999865 3789999999999998899999995 67778888885
No 282
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-39 Score=352.44 Aligned_cols=200 Identities=28% Similarity=0.469 Sum_probs=169.1
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 578999999953 469999999999999999999999999999999999999999999999998753 46789999
Q ss_pred EccCCccCCC-chhhhcccCC---CCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLS---QFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~---~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||++.+|.+ |+++|+.... ..+. +++.+ +++..++.+. ......+||||||||+
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~-----------~~~~~~~LS~G~~qrl 137 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDE------WLERLELSEY-----------ANKRVEELSKGNQQKV 137 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHH------HHHHcCChHH-----------HhCcHhhCCHHHHHHH
Confidence 9999999986 9999986421 1111 11222 4555554433 3334467999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
+||||++.+|+++||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998764 47899999999999876 9999999999999865
No 283
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=8.6e-39 Score=357.72 Aligned_cols=225 Identities=23% Similarity=0.354 Sum_probs=182.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEe-----CCCCChHH-
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLD-----ITTIGLYD- 1076 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~d-----i~~i~~~~- 1076 (1255)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5899999999953 469999999999999999999999999999999999999999999999999 87776654
Q ss_pred ---hhcccEEEccCCc--cCC-Cchhhhccc----CCCCChHHHHhccCchhHHHhccHHHHHHhhhcCcc-chhcCCCC
Q 000845 1077 ---LRSNLGIIPQDPT--LFS-GSVRYNLDP----LSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLD-SLVVQDGA 1145 (1255)
Q Consensus 1077 ---lR~~i~~vpQdp~--Lf~-gTIr~Nl~~----~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gld-t~v~e~G~ 1145 (1255)
.|+.++|+||+|. ++. .|+++|+.. +......++.+ ...++++.+ |++ +.....+.
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----------~~~~~l~~~--~l~~~~~~~~~~ 150 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----------TAGDWLERV--EIDAARIDDLPT 150 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----------HHHHHHHHc--CCChhHHhCCCc
Confidence 3567999999984 333 478888742 11111112111 122333333 332 34556678
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKL 1222 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1222 (1255)
+||||||||++||||++++|+||||||||++||+++.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++
T Consensus 151 ~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i 230 (258)
T PRK11701 151 TFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRV 230 (258)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999999987643 7899999999999975 999999999999
Q ss_pred EEEcChhHHhhcCChHHHHH
Q 000845 1223 VEYDEPKKLLRRQDSLFAQL 1242 (1255)
Q Consensus 1223 ve~G~~~eLl~~~~~~f~~l 1242 (1255)
++.|+++++..++...|.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~ 250 (258)
T PRK11701 231 VESGLTDQVLDDPQHPYTQL 250 (258)
T ss_pred EEeCCHHHHhcCCCCHHHHH
Confidence 99999999987655455443
No 284
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4.8e-39 Score=351.72 Aligned_cols=207 Identities=26% Similarity=0.388 Sum_probs=173.0
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH---hhcc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD---LRSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~---lR~~ 1080 (1255)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.+++... +|+.
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999533 46999999999999999999999999999999999999999999999999998876544 6889
Q ss_pred cEEEccCCccC-CCchhhhcccC---CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1081 LGIIPQDPTLF-SGSVRYNLDPL---SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1081 i~~vpQdp~Lf-~gTIr~Nl~~~---~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
++|+||+|.+| ..|+++|+... ...++++..+ ...++++..++.+...+ ...+||||||||++
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ 147 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRR--RVSAALDKVGLLDKAKN-----------FPIQLSGGEQQRVG 147 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHH--HHHHHHHHcCChhhhhC-----------CchhCCHHHHHHHH
Confidence 99999999874 57999999742 1223333221 00125666666554332 23579999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEE
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1224 (1255)
||||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 148 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 148 IARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 9999999999999999999999999999999998764 46899999999999977 89999999999863
No 285
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-39 Score=359.87 Aligned_cols=226 Identities=21% Similarity=0.336 Sum_probs=181.4
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh-hccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL-RSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l-R~~i 1081 (1255)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5899999999953 469999999999999999999999999999999999999999999999999988876654 4569
Q ss_pred EEEccCCccCCC-chhhhcccCCC-CChH----HHHhc---c-CchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQ-FTDQ----EIWEV---T-IPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~-~sd~----ei~~~---~-~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
+|+||+|.+|.+ |+++|+..... ..+. .+... . ...+.. ....+.++.+ |++........+|||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~--gl~~~~~~~~~~LS~G~ 158 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEAL--DRAATWLERV--GLLEHANRQAGNLAYGQ 158 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHH--HHHHHHHHhC--ChhhhhhCChhhCCHHH
Confidence 999999999986 99999974211 0000 00000 0 000000 0112222222 44444555567899999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcCh
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1228 (1255)
|||++||||++.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|++++.|++
T Consensus 159 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~ 238 (255)
T PRK11300 159 QRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTP 238 (255)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCH
Confidence 9999999999999999999999999999999999999987643 7899999999999976 999999999999999999
Q ss_pred hHHhhc
Q 000845 1229 KKLLRR 1234 (1255)
Q Consensus 1229 ~eLl~~ 1234 (1255)
+++..+
T Consensus 239 ~~~~~~ 244 (255)
T PRK11300 239 EEIRNN 244 (255)
T ss_pred HHHhhC
Confidence 998753
No 286
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-39 Score=358.70 Aligned_cols=222 Identities=21% Similarity=0.357 Sum_probs=184.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC--C---CCCEEEEcCEeCCC--CChH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE--P---TGGKIIIDGLDITT--IGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~--~---~~G~I~idG~di~~--i~~~ 1075 (1255)
-|+++||+++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999963 469999999999999999999999999999999999975 4 59999999999864 3445
Q ss_pred HhhcccEEEccCCccCCCchhhhcccC---CCC-Ch----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCC
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPL---SQF-TD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~---~~~-sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
.+|++++|+||+|.+|..|+++|+... ... .+ +++.+ +++.+++.+.+ .........+|
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~i-------~~~~~~~~~~L 149 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVET------SLKQAAIWDEV-------KDHLHESALSL 149 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHH------HHHHcCCccch-------hhHHhcCcccC
Confidence 678899999999999999999999632 111 11 12222 45555554322 22233445689
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||||||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 S~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~ 229 (252)
T PRK14255 150 SGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFA 229 (252)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999987667899999999999976 9999999999999999
Q ss_pred ChhHHhhcCChHH
Q 000845 1227 EPKKLLRRQDSLF 1239 (1255)
Q Consensus 1227 ~~~eLl~~~~~~f 1239 (1255)
++.+...++...+
T Consensus 230 ~~~~~~~~~~~~~ 242 (252)
T PRK14255 230 DTKQMFLNPKEKE 242 (252)
T ss_pred CHHHHhcCCCChH
Confidence 9999987655443
No 287
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.3e-38 Score=388.27 Aligned_cols=203 Identities=24% Similarity=0.341 Sum_probs=167.2
Q ss_pred CCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCCEEEEcCEeCCCCChHHhhcccEEEccCCc-cCC
Q 000845 1016 NAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE--PTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPT-LFS 1092 (1255)
Q Consensus 1016 ~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~--~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~-Lf~ 1092 (1255)
+....|+|||=-++||--.|++|.||||||||++.|.+-.. ..+|+|+|||.+..+ +..++.+|||.|++. +=.
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 34468999999999999999999999999999999998643 357999999998765 789999999999775 545
Q ss_pred CchhhhcccC------CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCC-
Q 000845 1093 GSVRYNLDPL------SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRR- 1165 (1255)
Q Consensus 1093 gTIr~Nl~~~------~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~- 1165 (1255)
-||||-|.+- .+.+++|-.+ ..+++++..+|.++- |..||.-|..||..||.||.||=-|+.||
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~--yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~ 949 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYE--YVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPS 949 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHH--HHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCc
Confidence 6999998531 2345544322 112366666665553 45688888999999999999999999999
Q ss_pred CeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhh--hhcCEEEEEeC-CEEEEEcChhH
Q 000845 1166 QILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATV--MDCNMVLSMSD-GKLVEYDEPKK 1230 (1255)
Q Consensus 1166 ~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti--~~~DrI~vl~~-G~ive~G~~~e 1230 (1255)
.||.||||||+||+++...|.+.+|+.. .|+||++.-|.++.. +.+|+++.|++ |+.|-.|+..+
T Consensus 950 ~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 950 SILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred eeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 8999999999999999999999999875 689999999999964 56999999975 89999988654
No 288
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-39 Score=353.88 Aligned_cols=210 Identities=24% Similarity=0.453 Sum_probs=181.3
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|.. + +|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 578999999963 3 8999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EccCCccCC-CchhhhcccC---CCCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFS-GSVRYNLDPL---SQFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~-gTIr~Nl~~~---~~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||++.+|. .|+++|+... ...+. +++.+ +++.+++.++..+.+ .+||||||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LS~G~~qrl 138 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLE------IAEMLGIDHLLNRKP-----------ETLSGGEQQRV 138 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHH------HHHHcCChhHHhcCc-----------ccCCHHHHHHH
Confidence 999999995 6999999632 11121 22333 677777766554433 47999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
+||||++++|++++|||||++||+.+.+.+.+.|++... ++|+|++||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 139 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 218 (235)
T cd03299 139 AIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVF 218 (235)
T ss_pred HHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999998643 7999999999999876 9999999999999999999998
Q ss_pred hcC
Q 000845 1233 RRQ 1235 (1255)
Q Consensus 1233 ~~~ 1235 (1255)
+.+
T Consensus 219 ~~~ 221 (235)
T cd03299 219 KKP 221 (235)
T ss_pred hCc
Confidence 754
No 289
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.8e-39 Score=364.04 Aligned_cols=213 Identities=28% Similarity=0.522 Sum_probs=186.0
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.++++||+.+|.. ...+|+||||+|++||.+|++||||||||||+++|+|++.|++|+|.++|.|...- ....|++||
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999963 34699999999999999999999999999999999999999999999999998764 678899999
Q ss_pred EEccCCccCCC-chhhhcccCCC---C----ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLSQ---F----TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~~---~----sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
|+||+|.+++. |++|||+++.. . .++.+.+ +++..+|.+.- +..+ ..||+|||||
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~------~l~~~~L~~~~-------~~~~----~~lS~G~kqr 144 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEE------LLELFGLEDKA-------NKKV----RTLSGGMKQR 144 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHH------HHHHcCCchhh-------Ccch----hhcCHHHHHH
Confidence 99999998876 99999986431 1 1234444 78888776521 2222 4699999999
Q ss_pred HHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC-C-cEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1155 IGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA-N-CTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1155 l~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~-~-~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
++||+||+.+|++|||||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||||++|++|+++..|+++++
T Consensus 145 l~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l 224 (293)
T COG1131 145 LSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEEL 224 (293)
T ss_pred HHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998875 4 699999999999988 999999999999999999998
Q ss_pred hhc
Q 000845 1232 LRR 1234 (1255)
Q Consensus 1232 l~~ 1234 (1255)
...
T Consensus 225 ~~~ 227 (293)
T COG1131 225 KEK 227 (293)
T ss_pred HHh
Confidence 654
No 290
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.2e-39 Score=368.43 Aligned_cols=199 Identities=26% Similarity=0.440 Sum_probs=171.4
Q ss_pred CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCC-chh
Q 000845 1018 PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSG-SVR 1096 (1255)
Q Consensus 1018 ~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~g-TIr 1096 (1255)
.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999976 345678999999999999986 999
Q ss_pred hhcccCC---CCChH----HHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEE
Q 000845 1097 YNLDPLS---QFTDQ----EIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILV 1169 (1255)
Q Consensus 1097 ~Nl~~~~---~~sd~----ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILi 1169 (1255)
+|+.+.. ..+.+ ++.+ +++.+++.+.. +. ...+||||||||++|||||+++|++||
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~-------~~----~~~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEE------LLELFELGEAA-------DR----PVGTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHH------HHHHcCChhHh-------CC----chhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9997432 11212 2322 66666665432 22 235799999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1170 LDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1170 LDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999998864 47899999999999976 999999999999999999998764
No 291
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=323.80 Aligned_cols=216 Identities=28% Similarity=0.442 Sum_probs=182.9
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|.|+|||.|+.+ .+...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcce
Confidence 678899999975 2348999999999999999999999999999999999999999999999999987 45678999999
Q ss_pred EccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
++-+.-|+.. |.||||.+|+ ..++.++... ....-+..++.++. |..+ .+||-|+|||++|||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kar--i~~l~k~l~l~~~~-------~rRv----~~~S~G~kqkV~iAR 146 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKAR--IAELSKRLQLLEYL-------DRRV----GEFSTGMKQKVAIAR 146 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHH--HHHHHHHhChHHHH-------HHHH----hhhchhhHHHHHHHH
Confidence 9977777765 9999998765 2344443210 00133344444443 3344 369999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREFA-NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||+++|+|++||||||+||.-+.+.+++.+++... +++||+-||.++.++. ||||+++.+|+++..|+++++.++
T Consensus 147 Alvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 147 ALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 99999999999999999999999999999988765 8999999999999985 999999999999999999999875
No 292
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3.2e-39 Score=351.23 Aligned_cols=204 Identities=28% Similarity=0.448 Sum_probs=169.4
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCC--CChHHhhccc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITT--IGLYDLRSNL 1081 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~--i~~~~lR~~i 1081 (1255)
|+++||+++|+. .++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .+...+|+.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 578999999954 469999999999999999999999999999999999999999999999999853 4556678999
Q ss_pred EEEccCCccCC-CchhhhcccCC----CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1082 GIIPQDPTLFS-GSVRYNLDPLS----QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1082 ~~vpQdp~Lf~-gTIr~Nl~~~~----~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
+|+||+|.+|. .|+++|+.... ..+.++..+ ...++++..++.+... ....+||||||||++
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ 145 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE--RALELLEKVGLADKAD-----------AYPAQLSGGQQQRVA 145 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH--HHHHHHHHcCCHhHhh-----------hCccccCHHHHHHHH
Confidence 99999999987 59999996421 222222111 0011455555544333 334579999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEE
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKL 1222 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1222 (1255)
||||++++|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.+ ||+|++|++|++
T Consensus 146 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 146 IARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999999999865 47899999999999976 999999999975
No 293
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=6.1e-39 Score=348.39 Aligned_cols=201 Identities=20% Similarity=0.394 Sum_probs=173.4
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++||+++|+. +++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ .+|+.++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999952 578999999999999999999999999999999999999999999999987644 46788999
Q ss_pred EccCCccCCC-chhhhccc-CCC-C-----ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDP-LSQ-F-----TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~-~~~-~-----sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||+|.+|.+ |+++|+.. ... . .++++.+ +++..++.+...+.| .+||||||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~~-----------~~LS~G~~qrl 137 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVD------AAQQVGIADYLDRLP-----------EQLSGGQRQRV 137 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHH------HHHHcCcHHHhhCCc-----------ccCCHHHHHHH
Confidence 9999999975 99999963 111 1 1233433 778888776655444 36999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcC
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1227 (1255)
+||||++++|+|+||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|.
T Consensus 138 ~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 138 ALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999999999998653 7899999999999876 99999999999999874
No 294
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=9.8e-39 Score=356.15 Aligned_cols=224 Identities=20% Similarity=0.331 Sum_probs=182.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC----CCCEEEEcCEeCCCCChHHhh
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP----TGGKIIIDGLDITTIGLYDLR 1078 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~----~~G~I~idG~di~~i~~~~lR 1078 (1255)
.++++|++++| + .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..+
T Consensus 4 ~l~~~~l~~~~--~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA--A-QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe--c-cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 2 3599999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cccEEEccCCc-cCC--Cchhhhccc----CC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1079 SNLGIIPQDPT-LFS--GSVRYNLDP----LS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1079 ~~i~~vpQdp~-Lf~--gTIr~Nl~~----~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
+.++|+||+|. .|. .|+.+|+.. .+ ...++++.+ +++.+++.+. ++.++.....||||
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~--------~~~~~~~~~~LS~G 144 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTA------ALEAVGLENA--------ARVLKLYPFEMSGG 144 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHH------HHHHcCCCCh--------hhhhhcCCcccCHH
Confidence 67999999985 343 477777532 11 122334444 6776666432 11334455689999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcC
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1227 (1255)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|+
T Consensus 145 q~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~ 224 (254)
T PRK10418 145 MLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGD 224 (254)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999999999999988643 7899999999999975 99999999999999999
Q ss_pred hhHHhhcCCh-HHHHHHHH
Q 000845 1228 PKKLLRRQDS-LFAQLVKE 1245 (1255)
Q Consensus 1228 ~~eLl~~~~~-~f~~l~~~ 1245 (1255)
++++.+++.. .++.++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~ 243 (254)
T PRK10418 225 VETLFNAPKHAVTRSLVSA 243 (254)
T ss_pred HHHHhhCCCCHHHHHHHHh
Confidence 9999876544 45555543
No 295
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=3.2e-38 Score=397.63 Aligned_cols=232 Identities=20% Similarity=0.305 Sum_probs=156.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHh------ccC---CCCCCE------------
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALF------RLV---EPTGGK------------ 1061 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~------rl~---~~~~G~------------ 1061 (1255)
.++++|++. ..|+|+||+|++||.+||+|.||||||||+.-++ ++. .+..+.
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 588888852 2599999999999999999999999999998764 111 122222
Q ss_pred EEEcCEeCCCCC----------hHHhhcccE---------EEccCCccCC-----------CchhhhcccCCC-------
Q 000845 1062 IIIDGLDITTIG----------LYDLRSNLG---------IIPQDPTLFS-----------GSVRYNLDPLSQ------- 1104 (1255)
Q Consensus 1062 I~idG~di~~i~----------~~~lR~~i~---------~vpQdp~Lf~-----------gTIr~Nl~~~~~------- 1104 (1255)
|.||-.++..-+ .+.+|.-++ |-++.-...+ |+++.|+.+..+
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 334433332111 122343332 2222222221 566666654221
Q ss_pred -----------------CChHHHHhccCchhHHHhc----cH---HHHHHhhhcCccc-hhcCCCCCCChhHHHHHHHHH
Q 000845 1105 -----------------FTDQEIWEVTIPSQVLEKC----QL---REVIQEKKEGLDS-LVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1105 -----------------~sd~ei~~~~~~~~al~~~----~l---~~~i~~lp~gldt-~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
.+-.|+.+.. ..++++-. .+ .+.+.. -||+. .++.....||||||||+.|||
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~lt-v~E~l~~f~~~~~i~~~l~~L~~--vgL~~l~l~~~~~tLSgGEkQRl~LAr 843 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMT-VEEALEFFEAIPKIARKLQTLVD--VGLGYIKLGQPATTLSGGEAQRVKLAK 843 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCc-HHHHHHHHHhchhhhHHHHHHHH--CCCCcccccCCcccCCHHHHHHHHHHH
Confidence 1122222110 00111111 00 011111 25654 356677899999999999999
Q ss_pred HHccCC---CeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEEE------eCCEEEEEcChh
Q 000845 1160 VVLRRR---QILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLSM------SDGKLVEYDEPK 1229 (1255)
Q Consensus 1160 AlL~~~---~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl------~~G~ive~G~~~ 1229 (1255)
+|+++| +++||||||++||+++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+
T Consensus 844 aL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~ 923 (943)
T PRK00349 844 ELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPE 923 (943)
T ss_pred HHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHH
Confidence 999999 9999999999999999999999998865 478999999999999889999999 799999999999
Q ss_pred HHhhcCChHHHHHHH
Q 000845 1230 KLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1230 eLl~~~~~~f~~l~~ 1244 (1255)
++.+++++.-.+.++
T Consensus 924 el~~~~~s~t~~~l~ 938 (943)
T PRK00349 924 EVAKVEASYTGRYLK 938 (943)
T ss_pred HHHhCcccHHHHHHH
Confidence 999887666555554
No 296
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1e-38 Score=357.89 Aligned_cols=223 Identities=22% Similarity=0.352 Sum_probs=184.0
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CCEEEEcCEeCCCC-----Ch
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT---GGKIIIDGLDITTI-----GL 1074 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~---~G~I~idG~di~~i-----~~ 1074 (1255)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 4899999999953 46999999999999999999999999999999999999886 49999999998654 23
Q ss_pred HHhhcccEEEccCCccCCC-chhhhcccCCC------------CC---hHHHHhccCchhHHHhccHHHHHHhhhcCccc
Q 000845 1075 YDLRSNLGIIPQDPTLFSG-SVRYNLDPLSQ------------FT---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDS 1138 (1255)
Q Consensus 1075 ~~lR~~i~~vpQdp~Lf~g-TIr~Nl~~~~~------------~s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt 1138 (1255)
..+|++++|+||++.+|.+ |+++|+..... .. .+++.+ +++..++.+..
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~--------- 146 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQ------ALTRVGMVHFA--------- 146 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHH------HHHHcCCHHHH---------
Confidence 5678899999999998885 99999963210 01 112222 55555554433
Q ss_pred hhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEE
Q 000845 1139 LVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVL 1215 (1255)
Q Consensus 1139 ~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~ 1215 (1255)
.....+||||||||++||||++.+|++|||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|+
T Consensus 147 --~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 147 --HQRVSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred --hCCccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEE
Confidence 23345799999999999999999999999999999999999999999999875 37899999999998765 99999
Q ss_pred EEeCCEEEEEcChhHHhhcCChHHHHHHHHHH
Q 000845 1216 SMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1216 vl~~G~ive~G~~~eLl~~~~~~f~~l~~~~~ 1247 (1255)
+|++|++++.|+++++ . .....+++....
T Consensus 225 ~l~~g~i~~~g~~~~~-~--~~~~~~~~~~~~ 253 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF-D--NERFDHLYRSIN 253 (262)
T ss_pred EEECCEEEEeCCHHHh-c--cHHHHHHHhhhh
Confidence 9999999999999996 3 245666665544
No 297
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-39 Score=357.35 Aligned_cols=211 Identities=26% Similarity=0.365 Sum_probs=180.9
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC--------CCEEEEcCEeCCCCChH
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT--------GGKIIIDGLDITTIGLY 1075 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~--------~G~I~idG~di~~i~~~ 1075 (1255)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 689999999953 46999999999999999999999999999999999999998 99999999999888888
Q ss_pred HhhcccEEEccCCc-cCCCchhhhcccCCC--------CCh---HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCC
Q 000845 1076 DLRSNLGIIPQDPT-LFSGSVRYNLDPLSQ--------FTD---QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQD 1143 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~-Lf~gTIr~Nl~~~~~--------~sd---~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~ 1143 (1255)
.+|+.++|+||++. +|..|+++|+..... .+. +.+.+ +++..++. +..+..
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~-----------~~~~~~ 142 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQ------ALALAGAT-----------ALVGRD 142 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHH------HHHHcCcH-----------hhhcCC
Confidence 88889999999986 578899999964211 111 11222 55555543 334445
Q ss_pred CCCCChhHHHHHHHHHHHc---------cCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-c
Q 000845 1144 GANWSMGQRQLIGLGRVVL---------RRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-C 1211 (1255)
Q Consensus 1144 G~~LSgGQrQrl~lARAlL---------~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~ 1211 (1255)
...||||||||++|||||+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.+ |
T Consensus 143 ~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~ 222 (272)
T PRK13547 143 VTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHA 222 (272)
T ss_pred cccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhC
Confidence 5689999999999999999 59999999999999999999999999998653 6899999999999975 9
Q ss_pred CEEEEEeCCEEEEEcChhHHhh
Q 000845 1212 NMVLSMSDGKLVEYDEPKKLLR 1233 (1255)
Q Consensus 1212 DrI~vl~~G~ive~G~~~eLl~ 1233 (1255)
|++++|++|++++.|++++++.
T Consensus 223 d~i~~l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 223 DRIAMLADGAIVAHGAPADVLT 244 (272)
T ss_pred CEEEEEECCeEEEecCHHHHcC
Confidence 9999999999999999999875
No 298
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=370.34 Aligned_cols=212 Identities=22% Similarity=0.360 Sum_probs=181.5
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCC----ChHHhhc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTI----GLYDLRS 1079 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i----~~~~lR~ 1079 (1255)
|++ |++++|.. . .+ |+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +....|+
T Consensus 2 l~~-~l~k~~~~--~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGD--L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCC--E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 99999953 2 23 99999999999999999999999999999999999999999999998653 2445688
Q ss_pred ccEEEccCCccCC-CchhhhcccCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1080 NLGIIPQDPTLFS-GSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1080 ~i~~vpQdp~Lf~-gTIr~Nl~~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
+++|+||++.+|+ .|+++|+.+.. ...++++.+ +++.+++.+..... ..+||||||||++|
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~------~l~~~gl~~~~~~~-----------~~~LSgGq~qRval 139 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDK------IVALLGIEPLLDRY-----------PGSLSGGEKQRVAI 139 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHH------HHHHcCCchhhhCC-----------cccCCHHHHHHHHH
Confidence 9999999999997 59999997432 223344444 77777776554433 35799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..+
T Consensus 140 araL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~ 219 (352)
T PRK11144 140 GRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWAS 219 (352)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999999988654 6899999999998876 999999999999999999999988
Q ss_pred CCh
Q 000845 1235 QDS 1237 (1255)
Q Consensus 1235 ~~~ 1237 (1255)
+..
T Consensus 220 p~~ 222 (352)
T PRK11144 220 SAM 222 (352)
T ss_pred cch
Confidence 753
No 299
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=7.6e-39 Score=355.80 Aligned_cols=216 Identities=21% Similarity=0.276 Sum_probs=173.7
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccC--CCCCCEEEEcCEeCCCCChHHh-hcc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLV--EPTGGKIIIDGLDITTIGLYDL-RSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~--~~~~G~I~idG~di~~i~~~~l-R~~ 1080 (1255)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999953 46999999999999999999999999999999999994 7999999999999988877664 456
Q ss_pred cEEEccCCccCCC-chhhhcccCC----C------CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCCh
Q 000845 1081 LGIIPQDPTLFSG-SVRYNLDPLS----Q------FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSM 1149 (1255)
Q Consensus 1081 i~~vpQdp~Lf~g-TIr~Nl~~~~----~------~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1149 (1255)
++|+||+|.+|++ |+++|+.... . .+.++..+ ...++++..++.+.. ++..+. ..|||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~------~~~~~~---~~LS~ 147 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLK--LLKAKLALLGMDEEF------LNRSVN---EGFSG 147 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHH--HHHHHHHHcCCchhh------cccccc---cCcCH
Confidence 9999999999986 8999985311 0 01111110 001144444442111 121111 24999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh--cCEEEEEeCCEEEEEc
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD--CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~--~DrI~vl~~G~ive~G 1226 (1255)
|||||++||||++++|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999998875 47899999999999976 7999999999999999
Q ss_pred ChhHHh
Q 000845 1227 EPKKLL 1232 (1255)
Q Consensus 1227 ~~~eLl 1232 (1255)
++++..
T Consensus 228 ~~~~~~ 233 (243)
T TIGR01978 228 DVELAK 233 (243)
T ss_pred CHHHhc
Confidence 997654
No 300
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7.4e-40 Score=324.58 Aligned_cols=224 Identities=23% Similarity=0.410 Sum_probs=186.7
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH-hhcc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD-LRSN 1080 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~-lR~~ 1080 (1255)
+.+..+|+..+|. ...|+++|||++++||.||+.||||+||||.+.++.|+..|++|+|.+||.||+.+|++. -|-.
T Consensus 3 ~~L~a~~l~K~y~--kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYK--KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhC--CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 3578899999995 356999999999999999999999999999999999999999999999999999999987 4677
Q ss_pred cEEEccCCccCCC-chhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1081 LGIIPQDPTLFSG-SVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1081 i~~vpQdp~Lf~g-TIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
|+|+||+|.+|.+ |+++||...-+..+.+... +-++..+.+.++.+ .+...-...|..||||||+|+-|||
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~------~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIAR 152 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKK------AERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIAR 152 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhH------HHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHH
Confidence 9999999999987 9999997533322211111 12222233333332 3444444567799999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhh-hhcCEEEEEeCCEEEEEcChhHHhhcC
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATV-MDCNMVLSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti-~~~DrI~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
||..+|+.++||||.+++||.+-..||+.++.+. +|--|++.-|..... .-|||.+++.+|+|...|+|+|+.+++
T Consensus 153 aLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~ 230 (243)
T COG1137 153 ALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNE 230 (243)
T ss_pred HHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcCh
Confidence 9999999999999999999999999999998765 466899999998754 559999999999999999999999874
No 301
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=353.03 Aligned_cols=201 Identities=25% Similarity=0.332 Sum_probs=170.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +..++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 689999999953 4699999999999999999999999999999999999999999999999998642 346899
Q ss_pred EccCCccCC-CchhhhcccCC---CCChH----HHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1084 IPQDPTLFS-GSVRYNLDPLS---QFTDQ----EIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1084 vpQdp~Lf~-gTIr~Nl~~~~---~~sd~----ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+||++.+|. .|+++|+.... ....+ ++.+ +++..++.+... ....+||||||||+
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~gl~~~~~-----------~~~~~LSgGq~qrl 137 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQ------MLKKVGLEGAEK-----------RYIWQLSGGQRQRV 137 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHH------HHHHcCChhHhh-----------CChhhCCHHHHHHH
Confidence 999999887 59999996421 12222 2222 566666554332 23457999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEe--CCEEEEEcCh
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMS--DGKLVEYDEP 1228 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~--~G~ive~G~~ 1228 (1255)
+||||++++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.+++
T Consensus 138 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 138 GIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999999999999999998863 37999999999999876 99999998 5999998764
No 302
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.5e-38 Score=347.04 Aligned_cols=206 Identities=26% Similarity=0.369 Sum_probs=173.1
Q ss_pred EEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChH---Hhh
Q 000845 1004 VEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLY---DLR 1078 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~---~lR 1078 (1255)
++++|++++|+++. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996432 5699999999999999999999999999999999999999999999999999877653 468
Q ss_pred cccEEEccCCccCC-CchhhhcccCC----CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1079 SNLGIIPQDPTLFS-GSVRYNLDPLS----QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1079 ~~i~~vpQdp~Lf~-gTIr~Nl~~~~----~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
+.++|+||+|.+|. .|+.+|+.+.. ..+.++..+ ...++++.+++.++....| .+||+||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~q 148 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARE--RARAMLEAVGLGDHLDYYP-----------HNLSGGQKQ 148 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHH--HHHHHHHHcCChhhhhcCh-----------hhCCHHHHH
Confidence 89999999999998 69999997432 122222211 0112566666655544433 479999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhhcCEEEEEeCCEE
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMDCNMVLSMSDGKL 1222 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~i 1222 (1255)
|++||||++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 149 rv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 149 RVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999988753 7999999999997767999999999986
No 303
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6.2e-38 Score=351.78 Aligned_cols=228 Identities=21% Similarity=0.344 Sum_probs=185.3
Q ss_pred eEEEEEEEEEeCCC-------CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChH
Q 000845 1003 KVEIYDLQIRYRPN-------APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~-------~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~ 1075 (1255)
-|+++||+++|+.+ .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999631 35699999999999999999999999999999999999999999999999999887653
Q ss_pred ---HhhcccEEEccCCc--cC-CCchhhhcccC-C---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccc-hhcCCC
Q 000845 1076 ---DLRSNLGIIPQDPT--LF-SGSVRYNLDPL-S---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDS-LVVQDG 1144 (1255)
Q Consensus 1076 ---~lR~~i~~vpQdp~--Lf-~gTIr~Nl~~~-~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt-~v~e~G 1144 (1255)
.+|+.++|+||++. ++ ..|+++|+... . ..+.+ .....+.+.+..+ |+++ ......
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~-----------~~~~~~~~~l~~~--gl~~~~~~~~~ 149 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKA-----------ERLARASEMLRAV--DLDDSVLDKRP 149 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHH-----------HHHHHHHHHHHHc--CCChhHhhCCC
Confidence 46889999999983 43 36899997421 1 11111 1111223334332 4542 345566
Q ss_pred CCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCE
Q 000845 1145 ANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGK 1221 (1255)
Q Consensus 1145 ~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1221 (1255)
..||||||||++|||||+.+|+||||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|+
T Consensus 150 ~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~ 229 (268)
T PRK10419 150 PQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQ 229 (268)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 78999999999999999999999999999999999999999999987653 7899999999999986 99999999999
Q ss_pred EEEEcChhHHhhcCChHHHHHHH
Q 000845 1222 LVEYDEPKKLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1222 ive~G~~~eLl~~~~~~f~~l~~ 1244 (1255)
+++.|+++++... ++.|..-+.
T Consensus 230 i~~~g~~~~~~~~-~~~~~~~~~ 251 (268)
T PRK10419 230 IVETQPVGDKLTF-SSPAGRVLQ 251 (268)
T ss_pred EeeeCChhhccCC-CCHHHHHHH
Confidence 9999999999864 555554443
No 304
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.4e-38 Score=345.28 Aligned_cols=204 Identities=27% Similarity=0.401 Sum_probs=175.6
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.... ++.++|
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999963 46999999999999999999999999999999999999999999999999876422 357999
Q ss_pred EccCCccCC-CchhhhcccC---CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1084 IPQDPTLFS-GSVRYNLDPL---SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1084 vpQdp~Lf~-gTIr~Nl~~~---~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
+||++.+|. .|+++|+... ....++++.+ +++..++.+..... ..+||||||||++|||
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~-----------~~~LS~G~~~rv~lar 137 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDE------VLNIVDLTNTGKKK-----------AKQFSLGMKQRLGIAI 137 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHH------HHHHcCCcHHHhhh-----------HhhCCHHHHHHHHHHH
Confidence 999999886 5999999632 1223445554 77777776554332 2479999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++.+
T Consensus 138 al~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 138 ALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred HHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999999999998764 47899999999999865 99999999999999999865
No 305
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-38 Score=329.93 Aligned_cols=171 Identities=40% Similarity=0.725 Sum_probs=160.5
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+...+.+++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999996543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHcc
Q 000845 1084 IPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLR 1163 (1255)
Q Consensus 1084 vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~ 1163 (1255)
+||+|.+|+.|++||+ ||+|||||++||||+++
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------------LS~G~~~rl~la~al~~ 113 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------------LSGGQRQRIAIARALLR 113 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------------hCHHHHHHHHHHHHHhc
Confidence 9999999988888775 99999999999999999
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCE
Q 000845 1164 RRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGK 1221 (1255)
Q Consensus 1164 ~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1221 (1255)
+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|+
T Consensus 114 ~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 114 DPPILILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred CCCEEEEECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999999999998877799999999999998899999999985
No 306
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2e-38 Score=347.67 Aligned_cols=212 Identities=23% Similarity=0.344 Sum_probs=169.0
Q ss_pred EEEEEEEEEeCCC--CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC---CCCCEEEEcCEeCCCCChHHhh
Q 000845 1004 VEIYDLQIRYRPN--APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE---PTGGKIIIDGLDITTIGLYDLR 1078 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~--~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~---~~~G~I~idG~di~~i~~~~lR 1078 (1255)
++|+||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999755 3679999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cccEEEccCCccCCC-chhhhcccCCC-CChHHHHhccCchhHHHhccHHH-HHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1079 SNLGIIPQDPTLFSG-SVRYNLDPLSQ-FTDQEIWEVTIPSQVLEKCQLRE-VIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1079 ~~i~~vpQdp~Lf~g-TIr~Nl~~~~~-~sd~ei~~~~~~~~al~~~~l~~-~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
++++|+||++.+|.+ |+++|+.+... .......+ ........+ .+.. .+++........+||||||||+
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~------~~~~~~~~~~~l~~--~~l~~~~~~~~~~LS~G~~qrl 152 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSD------AIRKKRVEDVLLRD--LALTRIGGNLVKGISGGERRRV 152 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccch------HHHHHHHHHHHHHh--hcchhhhcccccCcCHHHHHHH
Confidence 899999999999988 99999974211 00000000 000000111 1111 1333333344568999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCc-hhhh-hcCEEEEEeCCEEEEEc
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRI-ATVM-DCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl-~ti~-~~DrI~vl~~G~ive~G 1226 (1255)
+||||++++|+||||||||++||+.+.+.+.+.|++.. .++|+|++||++ +.+. .||+|++|++|++++.|
T Consensus 153 ~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 153 SIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998764 478999999998 4654 59999999999999876
No 307
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.8e-38 Score=367.34 Aligned_cols=212 Identities=24% Similarity=0.359 Sum_probs=177.9
Q ss_pred EEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC----hHHhhcccEE
Q 000845 1008 DLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG----LYDLRSNLGI 1083 (1255)
Q Consensus 1008 nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~----~~~lR~~i~~ 1083 (1255)
|++++|.. . .+ |+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+ ....|++++|
T Consensus 4 ~l~~~~~~--~-~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGD--F-SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECC--E-EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 89999953 2 35 999999999999999999999999999999999999999999999986543 3356889999
Q ss_pred EccCCccCCC-chhhhcccCC-CCChH----HHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLS-QFTDQ----EIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~-~~sd~----ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
+||++.+|.+ |+++|+.+.. ....+ .+.+ +++..++.+.. .....+||||||||++|
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~------~l~~~gL~~~~-----------~~~~~~LSgGqkqRval 142 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSERRISFER------VIELLGIGHLL-----------GRLPGRLSGGEKQRVAI 142 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHHHHHHHH------HHHHcCChhHh-----------cCChhhCCHHHHHHHHH
Confidence 9999999976 9999997421 11111 1222 55555554433 33346799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 143 AraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (354)
T TIGR02142 143 GRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWAS 222 (354)
T ss_pred HHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999999988653 7899999999999876 999999999999999999999987
Q ss_pred CChHHH
Q 000845 1235 QDSLFA 1240 (1255)
Q Consensus 1235 ~~~~f~ 1240 (1255)
+...|.
T Consensus 223 ~~~~~~ 228 (354)
T TIGR02142 223 PDLPWL 228 (354)
T ss_pred cCcccc
Confidence 665553
No 308
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-38 Score=342.02 Aligned_cols=232 Identities=21% Similarity=0.385 Sum_probs=183.2
Q ss_pred EEEEEEEEEeCCCC--CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-C----CCCEEEEcCEeCCCCChHH
Q 000845 1004 VEIYDLQIRYRPNA--PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE-P----TGGKIIIDGLDITTIGLYD 1076 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~--~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~-~----~~G~I~idG~di~~i~~~~ 1076 (1255)
++++|++..|.... ..+++||||+|++||.+||||.|||||||+.++++|+++ | .+|+|.++|.|+-+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999996432 369999999999999999999999999999999999998 3 6799999999999999875
Q ss_pred hh----cccEEEccCCcc-CC--Cchhhhcc----cCCCC-ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCC
Q 000845 1077 LR----SNLGIIPQDPTL-FS--GSVRYNLD----PLSQF-TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDG 1144 (1255)
Q Consensus 1077 lR----~~i~~vpQdp~L-f~--gTIr~Nl~----~~~~~-sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G 1144 (1255)
+| +.|++|||||.- |+ -||.+-+. ..... +.+|..+ ...+.|+.+++.+-- ..+..-.
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~--~a~~~L~~Vgi~~~~--------~~~~~YP 151 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKE--RAIELLELVGIPDPE--------RRLKSYP 151 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHH--HHHHHHHHcCCCCHH--------HHHhhCC
Confidence 43 479999999952 22 13333321 10111 1221111 012266677664321 1122234
Q ss_pred CCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCE
Q 000845 1145 ANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGK 1221 (1255)
Q Consensus 1145 ~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1221 (1255)
.+||||||||+.||-|++.+|++||-||||++||..+.+.|.+.|++.. .+.|+|+|||++..+.. ||||+||.+|+
T Consensus 152 helSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~ 231 (316)
T COG0444 152 HELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGR 231 (316)
T ss_pred cccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcE
Confidence 5799999999999999999999999999999999999999999998876 48899999999999977 99999999999
Q ss_pred EEEEcChhHHhhcCChHHHHHHHH
Q 000845 1222 LVEYDEPKKLLRRQDSLFAQLVKE 1245 (1255)
Q Consensus 1222 ive~G~~~eLl~~~~~~f~~l~~~ 1245 (1255)
|||.|+.++++.++.-.|.+.+-.
T Consensus 232 iVE~g~~~~i~~~P~HPYT~~Ll~ 255 (316)
T COG0444 232 IVEEGPVEEIFKNPKHPYTRGLLN 255 (316)
T ss_pred EEEeCCHHHHhcCCCChHHHHHHH
Confidence 999999999999988888765543
No 309
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.6e-37 Score=346.82 Aligned_cols=224 Identities=21% Similarity=0.330 Sum_probs=179.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEe-----CCCCChHH-
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLD-----ITTIGLYD- 1076 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~d-----i~~i~~~~- 1076 (1255)
.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +..++...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 4899999999963 358999999999999999999999999999999999999999999999988 77666543
Q ss_pred ---hhcccEEEccCCcc---CCCchhhhccc----CCCCChHHHHhccCchhHHHhccHHHHHHhhhcCcc-chhcCCCC
Q 000845 1077 ---LRSNLGIIPQDPTL---FSGSVRYNLDP----LSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLD-SLVVQDGA 1145 (1255)
Q Consensus 1077 ---lR~~i~~vpQdp~L---f~gTIr~Nl~~----~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gld-t~v~e~G~ 1145 (1255)
+++.++|+||+|.+ +..|+.+|+.. .......+. ...+.++++.+ |++ +.......
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~l~~l--~l~~~~~~~~~~ 147 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----------RAAAHDWLEEV--EIDPTRIDDLPR 147 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----------HHHHHHHHHHc--CCChhhhhcCch
Confidence 34679999999852 33578888731 111000011 01123344433 332 34455667
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKL 1222 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1222 (1255)
.||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||++++|++|++
T Consensus 148 ~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i 227 (253)
T TIGR02323 148 AFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRV 227 (253)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999999987643 7899999999999986 999999999999
Q ss_pred EEEcChhHHhhcCChHHHH
Q 000845 1223 VEYDEPKKLLRRQDSLFAQ 1241 (1255)
Q Consensus 1223 ve~G~~~eLl~~~~~~f~~ 1241 (1255)
++.|+++++..++...|.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~ 246 (253)
T TIGR02323 228 VESGLTDQVLDDPQHPYTQ 246 (253)
T ss_pred EEECCHHHHhcCCCCHHHH
Confidence 9999999998765444543
No 310
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=9.8e-38 Score=345.75 Aligned_cols=208 Identities=25% Similarity=0.397 Sum_probs=178.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999963 4599999999999999999999999999999999999999999999987 35799
Q ss_pred EEccCCccCC---CchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1083 IIPQDPTLFS---GSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1083 ~vpQdp~Lf~---gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
|+||+|.++. .|+++|+......+++++.+ +++.+++.+..... ...||||||||++|||
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~l~~~gl~~~~~~~-----------~~~LSgGq~qrv~lar 133 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILP------ALKRVQAGHLIDAP-----------MQKLSGGETQRVLLAR 133 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHH------HHHHcCChHHHhCC-----------hhhCCHHHHHHHHHHH
Confidence 9999998765 38899875433345566665 88888887665432 2479999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcCC
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQD 1236 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~ 1236 (1255)
|++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++ ++++.|+++++.. .
T Consensus 134 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~--~ 210 (251)
T PRK09544 134 ALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSL--H 210 (251)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhC--C
Confidence 99999999999999999999999999999987643 7899999999999865 999999965 7999999999875 3
Q ss_pred hHHHHHH
Q 000845 1237 SLFAQLV 1243 (1255)
Q Consensus 1237 ~~f~~l~ 1243 (1255)
..|.+++
T Consensus 211 ~~~~~~~ 217 (251)
T PRK09544 211 PEFISMF 217 (251)
T ss_pred HHHHHHh
Confidence 4566655
No 311
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-38 Score=330.18 Aligned_cols=172 Identities=33% Similarity=0.514 Sum_probs=158.3
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCC--hHHhhccc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIG--LYDLRSNL 1081 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~--~~~lR~~i 1081 (1255)
|+++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++++++ ....++.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999953 46999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEccCCccCCC-chhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
+|+||+|.+|.+ |+++|+... ||||||||++||||
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------------lS~G~~qr~~la~a 114 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------------LSGGQQQRVALARA 114 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------------CCHHHHHHHHHHHH
Confidence 999999998865 999987521 99999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCE
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGK 1221 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1221 (1255)
++++|+++||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.+ ||+|++|++|+
T Consensus 115 l~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 115 LAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred HHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999999999988654 5899999999999985 99999999985
No 312
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-38 Score=328.82 Aligned_cols=170 Identities=29% Similarity=0.546 Sum_probs=156.4
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+. .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+.++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999963 35999999999999999999999999999999999999999999999999998765 667889999
Q ss_pred EccCCccCCC-chhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHc
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVL 1162 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL 1162 (1255)
+||+|.+|.+ |+++|+. ||||||||++||||++
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------------LS~G~~qrv~laral~ 111 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------------LSGGMKQRLALAQALL 111 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------------cCHHHHHHHHHHHHHH
Confidence 9999998886 8888852 9999999999999999
Q ss_pred cCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEE
Q 000845 1163 RRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKL 1222 (1255)
Q Consensus 1163 ~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1222 (1255)
++|+|+||||||++||+.+.+.+.+.|++.. ++.|+|++||+.+.+.. ||+|++|++|++
T Consensus 112 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 112 HDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999999999999864 46899999999999885 899999999974
No 313
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.8e-38 Score=304.94 Aligned_cols=199 Identities=26% Similarity=0.414 Sum_probs=171.5
Q ss_pred EeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccC
Q 000845 1012 RYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLF 1091 (1255)
Q Consensus 1012 ~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf 1091 (1255)
.|.....++|+|+||++++||.++|.||||||||||++.+.-+.+|++|.+++.|.|++.++++.+|++++|+.|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 46555667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhccc-C---CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCe
Q 000845 1092 SGSVRYNLDP-L---SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQI 1167 (1255)
Q Consensus 1092 ~gTIr~Nl~~-~---~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~I 1167 (1255)
.+||.+|+-+ + +.-+|..... +.++++++.+.+ +..+..+||||||||++|+|-|---|+|
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~aa~-----~llar~~l~~~~----------L~k~it~lSGGE~QriAliR~Lq~~P~I 154 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAAAL-----DLLARFALPDSI----------LTKNITELSGGEKQRIALIRNLQFMPKI 154 (223)
T ss_pred ccchhhccccchHHhccCCChHHHH-----HHHHHcCCchhh----------hcchhhhccchHHHHHHHHHHhhcCCce
Confidence 9999999963 3 1223332211 145666554443 3334468999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchh-hhhcCEEEEEeCCEEEEE
Q 000845 1168 LVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIAT-VMDCNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1168 LiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~t-i~~~DrI~vl~~G~ive~ 1225 (1255)
|+|||+||+||+.+.+.|.+.|.+++ ++..++.|||+.+. ++.+||++-+..|++-|.
T Consensus 155 LLLDE~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~~ 215 (223)
T COG4619 155 LLLDEITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGEM 215 (223)
T ss_pred EEecCchhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCccccc
Confidence 99999999999999999999999988 46799999999998 788999999999986543
No 314
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-38 Score=335.66 Aligned_cols=190 Identities=19% Similarity=0.277 Sum_probs=161.5
Q ss_pred eEEEEEEEEEeCCC--CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC---CCCCEEEEcCEeCCCCChHHh
Q 000845 1003 KVEIYDLQIRYRPN--APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVE---PTGGKIIIDGLDITTIGLYDL 1077 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~---~~~G~I~idG~di~~i~~~~l 1077 (1255)
.+.++||+|.|+.+ ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 47899999999743 5679999999999999999999999999999999999999 89999999999998765 456
Q ss_pred hcccEEEccCCccCCC-chhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHH
Q 000845 1078 RSNLGIIPQDPTLFSG-SVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1078 R~~i~~vpQdp~Lf~g-TIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
|++++|+||++.+|.+ |+++|+.... .+. .+. ....||+|||||++
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~---------------~~~--------------~~~----~~~~LS~Ge~qrl~ 128 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFAL---------------RCK--------------GNE----FVRGISGGERKRVS 128 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhh---------------hhc--------------ccc----chhhCCHHHHHHHH
Confidence 8899999999988875 9999985310 000 122 23479999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEec-cCchhhh-hcCEEEEEeCCEEEEEc
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVA-HRIATVM-DCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~Ia-Hrl~ti~-~~DrI~vl~~G~ive~G 1226 (1255)
||||++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+++ |+++.+. .||+|++|++|++++.|
T Consensus 129 laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 129 IAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred HHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999999999998654 46766655 5556765 49999999999999865
No 315
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=350.83 Aligned_cols=209 Identities=22% Similarity=0.337 Sum_probs=172.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...++.++
T Consensus 6 ~l~~~~l~~~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRN-GHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecC-CcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 5899999999963 3469999999999999999999999999999999999999999999999998752 12234699
Q ss_pred EEccCCcc---CCCchhhhcccC--C------CC---ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1083 IIPQDPTL---FSGSVRYNLDPL--S------QF---TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1083 ~vpQdp~L---f~gTIr~Nl~~~--~------~~---sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
|+||+|.+ +..++++|+... . .. .++.+.+ +++..++.+.. |+. ..+||
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~gl~~~~-------~~~----~~~LS 144 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTA------ALARVDMVEFR-------HRQ----IGELS 144 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHH------HHHHcCChhHh-------cCC----cccCC
Confidence 99999865 456889987531 0 00 1122223 66777765543 222 34699
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+++++ +|++++.|
T Consensus 145 gG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g 223 (272)
T PRK15056 145 GGQKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASG 223 (272)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeec
Confidence 999999999999999999999999999999999999999998864 47899999999999865 8999777 89999999
Q ss_pred ChhHHhh
Q 000845 1227 EPKKLLR 1233 (1255)
Q Consensus 1227 ~~~eLl~ 1233 (1255)
+++++..
T Consensus 224 ~~~~~~~ 230 (272)
T PRK15056 224 PTETTFT 230 (272)
T ss_pred CHHhccC
Confidence 9999864
No 316
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1.2e-37 Score=334.10 Aligned_cols=185 Identities=24% Similarity=0.333 Sum_probs=162.0
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhcc--CCCCCCEEEEcCEeCCCCChHHh-hcc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRL--VEPTGGKIIIDGLDITTIGLYDL-RSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl--~~~~~G~I~idG~di~~i~~~~l-R~~ 1080 (1255)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999963 4699999999999999999999999999999999999 58999999999999998876654 567
Q ss_pred cEEEccCCccCCC-chhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1081 LGIIPQDPTLFSG-SVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1081 i~~vpQdp~Lf~g-TIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
++|+||+|.+|++ |+++|+ .. ...+||||||||++|||
T Consensus 79 i~~v~q~~~~~~~~~~~~~l------------------------------~~-----------~~~~LS~G~~qrv~lar 117 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFL------------------------------RY-----------VNEGFSGGEKKRNEILQ 117 (200)
T ss_pred EEEeecChhhccCccHHHHH------------------------------hh-----------ccccCCHHHHHHHHHHH
Confidence 9999999998876 333332 00 01369999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeccCchhhh--hcCEEEEEeCCEEEEEcChhHHh
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREFA-NCTVITVAHRIATVM--DCNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~-~~TvI~IaHrl~ti~--~~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
|++++|+|+||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.| +.|+.
T Consensus 118 al~~~p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 118 LLLLEPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999999999999988653 789999999999988 58999999999999999 55564
No 317
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.6e-37 Score=331.22 Aligned_cols=182 Identities=23% Similarity=0.408 Sum_probs=161.1
Q ss_pred eEEEEEEEEEeCCC----CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccC--CCCCCEEEEcCEeCCCCChHH
Q 000845 1003 KVEIYDLQIRYRPN----APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLV--EPTGGKIIIDGLDITTIGLYD 1076 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~----~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~--~~~~G~I~idG~di~~i~~~~ 1076 (1255)
.|+++||+++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|.|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999642 256999999999999999999999999999999999999 9999999999999875 36
Q ss_pred hhcccEEEccCCccCCC-chhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHH
Q 000845 1077 LRSNLGIIPQDPTLFSG-SVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLI 1155 (1255)
Q Consensus 1077 lR~~i~~vpQdp~Lf~g-TIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1155 (1255)
+|++++|+||++.+|.+ |+++|+.. . . ... .||||||||+
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~---------~--------~-~~~---------------------~LS~G~~qrv 120 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMF---------A--------A-KLR---------------------GLSGGERKRV 120 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHH---------H--------H-Hhc---------------------cCCHHHHHHH
Confidence 78899999999998875 99998741 0 0 000 6999999999
Q ss_pred HHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCch-hhhh-cCEEEEEeCCEEEEEc
Q 000845 1156 GLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIA-TVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1156 ~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~-ti~~-~DrI~vl~~G~ive~G 1226 (1255)
+||||++++|+++||||||++||+.+.+.+.+.|++.. +++|+|++||+++ .+.. ||+|++|++|++++.|
T Consensus 121 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 121 SIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998865 4789999999997 5654 9999999999998765
No 318
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-38 Score=339.42 Aligned_cols=199 Identities=26% Similarity=0.370 Sum_probs=165.8
Q ss_pred EEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCC----ChHHhhcc
Q 000845 1005 EIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTI----GLYDLRSN 1080 (1255)
Q Consensus 1005 ~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i----~~~~lR~~ 1080 (1255)
++ ||+++|+. ..+ |+||+|++ |++||+|+||||||||+++|+|+++|++|+|.++|.++... +...+|++
T Consensus 3 ~~-~l~~~~~~--~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 76 (214)
T cd03297 3 CV-DIEKRLPD--FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRK 76 (214)
T ss_pred ee-eeeEecCC--eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhc
Confidence 45 89999964 234 99999999 99999999999999999999999999999999999998643 23457889
Q ss_pred cEEEccCCccCC-CchhhhcccCCC-CCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1081 LGIIPQDPTLFS-GSVRYNLDPLSQ-FTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1081 i~~vpQdp~Lf~-gTIr~Nl~~~~~-~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
++|+||++.+|. .|+++|+..... ..+ +++.+ +++..++.+ ........||||||||
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~------~l~~~~l~~-----------~~~~~~~~LS~G~~qr 139 (214)
T cd03297 77 IGLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDE------LLDLLGLDH-----------LLNRYPAQLSGGEKQR 139 (214)
T ss_pred EEEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHH------HHHHcCCHh-----------HhhcCcccCCHHHHHH
Confidence 999999999986 499999974221 111 12222 455555443 3334456899999999
Q ss_pred HHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1155 IGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1155 l~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
++||||++++|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 140 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 140 VALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999999999988643 7899999999999965 9999999999999876
No 319
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-37 Score=329.45 Aligned_cols=181 Identities=21% Similarity=0.321 Sum_probs=159.9
Q ss_pred eEEEEEEEEEeCCC--CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccC--CCCCCEEEEcCEeCCCCChHHhh
Q 000845 1003 KVEIYDLQIRYRPN--APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLV--EPTGGKIIIDGLDITTIGLYDLR 1078 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~--~~~~G~I~idG~di~~i~~~~lR 1078 (1255)
.|+++|++++|+++ .+++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999642 246999999999999999999999999999999999986 489999999999885 5678
Q ss_pred cccEEEccCCccCCC-chhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1079 SNLGIIPQDPTLFSG-SVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1079 ~~i~~vpQdp~Lf~g-TIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
++++|++|+|.+|.+ |+++|+... . .++ +||||||||++|
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~------~~~------------------------~LSgGe~qrv~l 119 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------A------LLR------------------------GLSVEQRKRLTI 119 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------H------HHh------------------------cCCHHHhHHHHH
Confidence 899999999988875 999998520 0 110 699999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchh-h-hhcCEEEEEeC-CEEEEEc
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIAT-V-MDCNMVLSMSD-GKLVEYD 1226 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~t-i-~~~DrI~vl~~-G~ive~G 1226 (1255)
|||++++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++. + ..||+|++|++ |++++.|
T Consensus 120 a~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 120 GVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999999998864 47899999999984 4 55999999999 9999876
No 320
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=328.13 Aligned_cols=224 Identities=25% Similarity=0.382 Sum_probs=192.5
Q ss_pred eEEEEEEEEEeCCC----------------------CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCC
Q 000845 1003 KVEIYDLQIRYRPN----------------------APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGG 1060 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~----------------------~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G 1060 (1255)
.|+++||+.-+..+ ...-++|+||+|+.||+..|.|-||||||||+++|.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 57888888776432 12358999999999999999999999999999999999999999
Q ss_pred EEEEcCEeCCCCChHHhh----cccEEEccCCccCCC-chhhhcccCCC---CChHHHHhccCchhHHHhccHHHHHHhh
Q 000845 1061 KIIIDGLDITTIGLYDLR----SNLGIIPQDPTLFSG-SVRYNLDPLSQ---FTDQEIWEVTIPSQVLEKCQLREVIQEK 1132 (1255)
Q Consensus 1061 ~I~idG~di~~i~~~~lR----~~i~~vpQdp~Lf~g-TIr~Nl~~~~~---~sd~ei~~~~~~~~al~~~~l~~~i~~l 1132 (1255)
+|++||.|+..++..+|| +++++|+|.--||+- ||-+|..+.-+ .+.+|-.+ ...++|+.+||.+|-.+.
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~--~a~~~l~~VgL~~~~~~y 161 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREE--RALEALELVGLEGYADKY 161 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHH--HHHHHHHHcCchhhhhcC
Confidence 999999999999988874 579999999999875 99999976532 23333222 123489999999998877
Q ss_pred hcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh
Q 000845 1133 KEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD 1210 (1255)
Q Consensus 1133 p~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~ 1210 (1255)
|+ .||||+|||+.|||||..+|+||++|||.|+|||--...+|+-|.++- -++|+++|||+|+....
T Consensus 162 p~-----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlr 230 (386)
T COG4175 162 PN-----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALR 230 (386)
T ss_pred cc-----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHh
Confidence 74 689999999999999999999999999999999999999999887654 36899999999998765
Q ss_pred -cCEEEEEeCCEEEEEcChhHHhhcCChHH
Q 000845 1211 -CNMVLSMSDGKLVEYDEPKKLLRRQDSLF 1239 (1255)
Q Consensus 1211 -~DrI~vl~~G~ive~G~~~eLl~~~~~~f 1239 (1255)
-|||..|++|+|+..|+|+|.+.+|..-|
T Consensus 231 iG~rIaimkdG~ivQ~Gtp~eIl~~PAndY 260 (386)
T COG4175 231 IGDRIAIMKDGEIVQVGTPEEILLNPANDY 260 (386)
T ss_pred ccceEEEecCCeEEEeCCHHHHHcCccHHH
Confidence 89999999999999999999999886544
No 321
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.4e-37 Score=328.54 Aligned_cols=172 Identities=27% Similarity=0.469 Sum_probs=155.6
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh-HHhhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL-YDLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~-~~lR~~i 1081 (1255)
.++++|++++| +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999988874 4568899
Q ss_pred EEEccCC----ccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1082 GIIPQDP----TLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1082 ~~vpQdp----~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
+|+||+| .++..|+++|+... .. ||+|||||++|
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~-----------------~~-------------------------LS~G~~qrl~l 115 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALS-----------------SL-------------------------LSGGNQQKVVL 115 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHH-----------------hh-------------------------cCHHHHHHHHH
Confidence 9999995 34456999987521 00 99999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEE
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKL 1222 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1222 (1255)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++
T Consensus 116 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 116 ARWLARDPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred HHHHccCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999999998864 47899999999999987 999999999975
No 322
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.8e-37 Score=327.16 Aligned_cols=177 Identities=30% Similarity=0.500 Sum_probs=158.9
Q ss_pred EEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEE
Q 000845 1005 EIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGII 1084 (1255)
Q Consensus 1005 ~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~v 1084 (1255)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++.++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 57899999963 4699999999999999999999999999999999999999999999999999988888888999999
Q ss_pred ccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccC
Q 000845 1085 PQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRR 1164 (1255)
Q Consensus 1085 pQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~ 1164 (1255)
|| +++.+++.++... ...+||||||||++||||++++
T Consensus 79 ~q--------------------------------~l~~~gl~~~~~~-----------~~~~LS~G~~qrl~laral~~~ 115 (180)
T cd03214 79 PQ--------------------------------ALELLGLAHLADR-----------PFNELSGGERQRVLLARALAQE 115 (180)
T ss_pred HH--------------------------------HHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHHHhcC
Confidence 99 2455666655432 2357999999999999999999
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1165 RQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1165 ~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|+++||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.+ ||++++|++|++++.|
T Consensus 116 p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 116 PPILLLDEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999988654 7899999999999855 9999999999998764
No 323
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-38 Score=324.79 Aligned_cols=217 Identities=24% Similarity=0.409 Sum_probs=185.3
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh-hcccE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL-RSNLG 1082 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l-R~~i~ 1082 (1255)
++.++++.+|. .-.+++||||++++||++||+|||||||||+++++.|+|+|++|+|.++|.||..++++.. |..|+
T Consensus 5 L~v~~l~k~FG--Gl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFG--GLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecC--CEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 57899999994 3469999999999999999999999999999999999999999999999999999998884 66799
Q ss_pred EEccCCccCCC-chhhhcccCCC-------------C--ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCC
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLSQ-------------F--TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGAN 1146 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~~-------------~--sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1146 (1255)
--+|.+-+|++ |+-||+..... + .+++..+ ...+.|+.+ ||+..-.+...+
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e--~A~~~Le~v-----------gL~~~a~~~A~~ 149 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARE--RARELLEFV-----------GLGELADRPAGN 149 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHH--HHHHHHHHc-----------CCchhhcchhhc
Confidence 99999999987 99999863211 1 1222222 111234444 444444555568
Q ss_pred CChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEE
Q 000845 1147 WSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLV 1223 (1255)
Q Consensus 1147 LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv 1223 (1255)
||+||+.||-|||||..+|++|+||||.++|.++-...+.+.|++..+ +.|+++|-||++.+++ ||||+||+.|+++
T Consensus 150 LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~I 229 (250)
T COG0411 150 LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVI 229 (250)
T ss_pred CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCc
Confidence 999999999999999999999999999999999999999999998874 4899999999999988 9999999999999
Q ss_pred EEcChhHHhhcC
Q 000845 1224 EYDEPKKLLRRQ 1235 (1255)
Q Consensus 1224 e~G~~~eLl~~~ 1235 (1255)
.+|+|+|..++|
T Consensus 230 AeG~P~eV~~dp 241 (250)
T COG0411 230 AEGTPEEVRNNP 241 (250)
T ss_pred ccCCHHHHhcCH
Confidence 999999998875
No 324
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=2.6e-37 Score=320.69 Aligned_cols=164 Identities=26% Similarity=0.375 Sum_probs=149.7
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999643 46999999999999999999999999999999999999999999999873 68999
Q ss_pred EccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHcc
Q 000845 1084 IPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLR 1163 (1255)
Q Consensus 1084 vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~ 1163 (1255)
+||+|.++++|+++|+... ....||||||||++||||+++
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------------~~~~LS~G~~~rv~laral~~ 108 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------------WDDVLSGGEQQRLAFARLLLH 108 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------------CCCCCCHHHHHHHHHHHHHHc
Confidence 9999999999999998521 135799999999999999999
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeCCE
Q 000845 1164 RRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGK 1221 (1255)
Q Consensus 1164 ~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1221 (1255)
+|+++||||||++||+++.+.+.+.+++. ++|+|++||+++....||+|++|++|-
T Consensus 109 ~p~~lllDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 109 KPKFVFLDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred CCCEEEEECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99999999999999999999999999876 689999999999877799999998763
No 325
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=3.4e-37 Score=344.19 Aligned_cols=215 Identities=20% Similarity=0.279 Sum_probs=174.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhcc--CCCCCCEEEEcCEeCCCCChHHhhc-
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRL--VEPTGGKIIIDGLDITTIGLYDLRS- 1079 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl--~~~~~G~I~idG~di~~i~~~~lR~- 1079 (1255)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++..++....++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4999999999963 3599999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ccEEEccCCccCCC-chhhhcccCCC----C------ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCC-CC
Q 000845 1080 NLGIIPQDPTLFSG-SVRYNLDPLSQ----F------TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA-NW 1147 (1255)
Q Consensus 1080 ~i~~vpQdp~Lf~g-TIr~Nl~~~~~----~------sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~-~L 1147 (1255)
.++++||+|.+|++ |+++|+..... . ...+..+ ...++++.+++.+ +....... .|
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~----------~~~~~~~~~~L 152 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLE--IINEKLKLVGMDP----------SFLSRNVNEGF 152 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHH--HHHHHHHHcCCch----------hhhccccccCC
Confidence 58999999999986 78898753210 0 0001100 0012455554431 11222222 59
Q ss_pred ChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh--cCEEEEEeCCEEEE
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD--CNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~--~DrI~vl~~G~ive 1224 (1255)
|||||||++||||++++|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++
T Consensus 153 SgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~ 232 (252)
T CHL00131 153 SGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIK 232 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEE
Confidence 9999999999999999999999999999999999999999998865 47899999999999875 89999999999999
Q ss_pred EcChhHH
Q 000845 1225 YDEPKKL 1231 (1255)
Q Consensus 1225 ~G~~~eL 1231 (1255)
.|+++++
T Consensus 233 ~~~~~~~ 239 (252)
T CHL00131 233 TGDAELA 239 (252)
T ss_pred ecChhhh
Confidence 9999844
No 326
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.6e-37 Score=336.01 Aligned_cols=193 Identities=23% Similarity=0.348 Sum_probs=161.5
Q ss_pred EEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh----HHhhccc
Q 000845 1006 IYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL----YDLRSNL 1081 (1255)
Q Consensus 1006 ~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~----~~lR~~i 1081 (1255)
++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.+++.++. ...|+.+
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4689999963 469999999999999999999999999999999999999999999999999775542 2457889
Q ss_pred EEEccCCccCC-CchhhhcccCC---CCC----hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1082 GIIPQDPTLFS-GSVRYNLDPLS---QFT----DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1082 ~~vpQdp~Lf~-gTIr~Nl~~~~---~~s----d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
+|++|+|.+|. .|+++|+.... ... ++++.+ +++..++.+.. .....+|||||||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~-----------~~~~~~lS~G~~q 141 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKE------ALEKVGLNLKL-----------KQKIYELSGGEQQ 141 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHH------HHHHcCchhhh-----------cCChhhCCHHHHH
Confidence 99999999997 69999997421 111 122333 56666654432 2233579999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEEE
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLSM 1217 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl 1217 (1255)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+..||+|++|
T Consensus 142 r~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 142 RVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999999999998864 378999999999988779999885
No 327
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=4.7e-37 Score=340.84 Aligned_cols=209 Identities=22% Similarity=0.313 Sum_probs=172.4
Q ss_pred EEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEE
Q 000845 1005 EIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGII 1084 (1255)
Q Consensus 1005 ~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~v 1084 (1255)
+++||+++ .+|+|+||+|++||++||+|+||||||||+++|.|+++ .+|+|.+||.++...+...+++.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEEe
Confidence 56778775 27999999999999999999999999999999999986 499999999999988888888899999
Q ss_pred ccCCc-cCCCchhhhcccCCCC--ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHH
Q 000845 1085 PQDPT-LFSGSVRYNLDPLSQF--TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVV 1161 (1255)
Q Consensus 1085 pQdp~-Lf~gTIr~Nl~~~~~~--sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAl 1161 (1255)
||++. .+..|+++|+...... ..++..+ ...++++..++.+. .......||||||||++||||+
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la~al 141 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAVAS--ALNEVAEALGLDDK-----------LGRSVNQLSGGEWQRVRLAAVV 141 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHHHH--HHHHHHHHcCCHhH-----------hcCCcccCCHHHHHHHHHHHHH
Confidence 99985 4567999999754221 1111111 00115555555432 2334467999999999999999
Q ss_pred cc-------CCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1162 LR-------RRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1162 L~-------~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
++ +|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 142 ~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 142 LQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVL 221 (248)
T ss_pred hccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 97 679999999999999999999999998765 47899999999998765 9999999999999999999886
Q ss_pred h
Q 000845 1233 R 1233 (1255)
Q Consensus 1233 ~ 1233 (1255)
.
T Consensus 222 ~ 222 (248)
T PRK03695 222 T 222 (248)
T ss_pred C
Confidence 5
No 328
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.5e-37 Score=357.99 Aligned_cols=231 Identities=22% Similarity=0.374 Sum_probs=187.1
Q ss_pred eEEEEEEEEEeCCCCC--ceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC----CCEEEEcCEeCCCCChHH
Q 000845 1003 KVEIYDLQIRYRPNAP--LVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT----GGKIIIDGLDITTIGLYD 1076 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~--~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~----~G~I~idG~di~~i~~~~ 1076 (1255)
-++++|++..|..... .+++||||+|.+||.+||||.|||||||++++|.|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999964432 5999999999999999999999999999999999999987 899999999999888766
Q ss_pred hh----cccEEEccCCc-cCCC--chhhhcc----cCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCC
Q 000845 1077 LR----SNLGIIPQDPT-LFSG--SVRYNLD----PLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1077 lR----~~i~~vpQdp~-Lf~g--TIr~Nl~----~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
.| ++|++|||+|. .|+- ||.+-|. .....+-+|..+ ...+.++.+++.+-... ..-..
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~--~a~elL~~Vgl~~~~~~---------~~yPh 153 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARK--RAVELLEQVGLPDPERR---------DRYPH 153 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHH--HHHHHHHHcCCCChhhh---------ccCCc
Confidence 54 57999999996 4443 5544442 111111111111 01125666666443322 22346
Q ss_pred CCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEE
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKL 1222 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1222 (1255)
.||||||||+.||+||..+|++||+||||.+||+.+.+.|.+.|++.. .+.++|+|||++..+.+ ||||+||.+|++
T Consensus 154 eLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~i 233 (539)
T COG1123 154 QLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEI 233 (539)
T ss_pred ccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEE
Confidence 899999999999999999999999999999999999999999999876 57899999999999987 999999999999
Q ss_pred EEEcChhHHhhcCChHHHHHHH
Q 000845 1223 VEYDEPKKLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1223 ve~G~~~eLl~~~~~~f~~l~~ 1244 (1255)
||.|+++++++++.-.|.+.+-
T Consensus 234 VE~G~~~~i~~~p~hpYT~~Ll 255 (539)
T COG1123 234 VETGPTEEILSNPQHPYTRGLL 255 (539)
T ss_pred EEecCHHHHHhccCCcccHHHH
Confidence 9999999999998877766553
No 329
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=2.3e-36 Score=380.27 Aligned_cols=221 Identities=24% Similarity=0.351 Sum_probs=147.3
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHh------ccCC----C-----------CCCE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALF------RLVE----P-----------TGGK 1061 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~------rl~~----~-----------~~G~ 1061 (1255)
.++++|++. ..|+|+||+|++||.+||+|+||||||||++-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 588999862 2599999999999999999999999999998332 1111 1 1123
Q ss_pred EEEcCEeCCCCCh----------HHhhcccEEEcc------CCccCC--------------CchhhhcccCC--------
Q 000845 1062 IIIDGLDITTIGL----------YDLRSNLGIIPQ------DPTLFS--------------GSVRYNLDPLS-------- 1103 (1255)
Q Consensus 1062 I~idG~di~~i~~----------~~lR~~i~~vpQ------dp~Lf~--------------gTIr~Nl~~~~-------- 1103 (1255)
|.||-.+|..-+. +.+|..++=.|+ .+-.|+ |.+.-++.+..
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 6666655543221 235555555444 223333 11221111110
Q ss_pred ----CCChHHHHhccCc----hhHHHh--ccHHHHHHhhh-----------cCccc-hhcCCCCCCChhHHHHHHHHHHH
Q 000845 1104 ----QFTDQEIWEVTIP----SQVLEK--CQLREVIQEKK-----------EGLDS-LVVQDGANWSMGQRQLIGLGRVV 1161 (1255)
Q Consensus 1104 ----~~sd~ei~~~~~~----~~al~~--~~l~~~i~~lp-----------~gldt-~v~e~G~~LSgGQrQrl~lARAl 1161 (1255)
.+.++ +.++... .++++. ....+|+..++ -||+. .++.....|||||+||++|||+|
T Consensus 765 C~G~R~~~e-~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL 843 (924)
T TIGR00630 765 CKGKRYNRE-TLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKEL 843 (924)
T ss_pred cCCceeChH-HHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHH
Confidence 11111 1111000 001100 01112222221 25654 36777789999999999999999
Q ss_pred cc---CCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEEE------eCCEEEEEcChhHH
Q 000845 1162 LR---RRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLSM------SDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1162 L~---~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl------~~G~ive~G~~~eL 1231 (1255)
++ +|+++||||||++||+.+.+.+.+.|++.. ++.|+|+|+|+++.+..||+|++| ++|+|++.|+|+++
T Consensus 844 ~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 844 SKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 97 589999999999999999999999998875 478999999999999889999999 79999999999886
No 330
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.4e-37 Score=338.70 Aligned_cols=206 Identities=21% Similarity=0.344 Sum_probs=167.6
Q ss_pred eeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC----CCCEEEEcCEeCCCCChHHhhcccEEEccCCc-cCC--
Q 000845 1020 VLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP----TGGKIIIDGLDITTIGLYDLRSNLGIIPQDPT-LFS-- 1092 (1255)
Q Consensus 1020 vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~----~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~-Lf~-- 1092 (1255)
+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... ...++.++|+||+|. .|.
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 58999999999999999999999999999999999999 899999999998754 223468999999995 343
Q ss_pred Cchhhhccc----CCCCC---hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCC
Q 000845 1093 GSVRYNLDP----LSQFT---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRR 1165 (1255)
Q Consensus 1093 gTIr~Nl~~----~~~~s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~ 1165 (1255)
-|+.+|+.. .+... ++++.+ +++.+++.+. ++.......+||||||||++||||++++|
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~--------~~~~~~~~~~LS~G~~qrv~laral~~~p 144 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILE------ALEAVGLPDP--------EEVLKKYPFQLSGGMLQRVMIALALLLEP 144 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHH------HHHHcCCCch--------HHHHhCChhhcCHHHHHHHHHHHHHhcCC
Confidence 488888742 11111 122333 5555555311 12334445689999999999999999999
Q ss_pred CeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcCChHHHH
Q 000845 1166 QILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQ 1241 (1255)
Q Consensus 1166 ~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~~~f~~ 1241 (1255)
+||||||||++||+.+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++...+...|.+
T Consensus 145 ~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 145 PFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred CEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 99999999999999999999999988653 7899999999999975 9999999999999999999998765555554
No 331
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-37 Score=352.95 Aligned_cols=222 Identities=22% Similarity=0.292 Sum_probs=183.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhcccccccCcceEEEEeeEEEecC
Q 000845 377 IPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSDMQQVCSRAELEHSIFIKSADLSWEA 456 (1255)
Q Consensus 377 ~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~ 456 (1255)
++++|+.+|+++++|+.+..|+..+|..... ..|+..|+..++.+...... ..+..+.|+++|++++|+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~nls~~y~~ 92 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE---DFNHANVFEIRNFNFWYMN 92 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC---CCCcCceEEEEeeEEEecC
Confidence 5689999999999999999999888765433 56999999887654321111 1124568999999999974
Q ss_pred CCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCC-----CCCc------cc--------------------
Q 000845 457 DLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPR-----LQGM------DL-------------------- 505 (1255)
Q Consensus 457 ~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~-----~~G~------Di-------------------- 505 (1255)
. ..++|+|+||+|++||+++|+|++|||||||+++|+|++++ .+|. |+
T Consensus 93 ~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~ 171 (329)
T PRK14257 93 R-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQK 171 (329)
T ss_pred C-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecC
Confidence 3 34799999999999999999999999999999999999863 4551 10
Q ss_pred ------------C-------------------------CCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeC
Q 000845 506 ------------K-------------------------MLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDD 548 (1255)
Q Consensus 506 ------------~-------------------------~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDd 548 (1255)
. .++.+-.+.++++|.+|||||||||+||||+|++|+|+||||
T Consensus 172 ~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDE 251 (329)
T PRK14257 172 PTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDE 251 (329)
T ss_pred CccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 0 011111346789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChhHHhh
Q 000845 549 PFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPA-FDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 549 p~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~-aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
||||||+++.++ +.+++..+.+++|+|+|||+++++.. ||+|++|++|++++.|+++++..
T Consensus 252 Pts~LD~~~~~~-i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~ 313 (329)
T PRK14257 252 PTSALDPIATAK-IEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFI 313 (329)
T ss_pred CcccCCHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999877 57788887788999999999999887 89999999999999999999864
No 332
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.4e-36 Score=338.52 Aligned_cols=215 Identities=22% Similarity=0.330 Sum_probs=167.7
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccC--CCCCCEEEEcCEeCCCCChHHhh-cc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLV--EPTGGKIIIDGLDITTIGLYDLR-SN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~--~~~~G~I~idG~di~~i~~~~lR-~~ 1080 (1255)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999963 45999999999999999999999999999999999994 69999999999999888776654 57
Q ss_pred cEEEccCCccCCC-chhhhcccC-CC---CChHHHHhccCchhHHHhccHHHHHHh------hhcCccchhcCCCCCCCh
Q 000845 1081 LGIIPQDPTLFSG-SVRYNLDPL-SQ---FTDQEIWEVTIPSQVLEKCQLREVIQE------KKEGLDSLVVQDGANWSM 1149 (1255)
Q Consensus 1081 i~~vpQdp~Lf~g-TIr~Nl~~~-~~---~sd~ei~~~~~~~~al~~~~l~~~i~~------lp~gldt~v~e~G~~LSg 1149 (1255)
++|++|+|.++.. |..+++... .. ....+ .++..++.+.+.. +|+++.+... ..+|||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--~~~LS~ 148 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQE---------PLDRFDFQDLMEEKIALLKMPEDLLTRSV--NVGFSG 148 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccc---------cchHHHHHHHHHHHHHHcCCChhhcccCC--CCCCCH
Confidence 9999999987764 444433210 00 00000 1111111122211 2222222111 136999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeccCchhhhh--cCEEEEEeCCEEEEEc
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA-NCTVITVAHRIATVMD--CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~-~~TvI~IaHrl~ti~~--~DrI~vl~~G~ive~G 1226 (1255)
|||||++||||++++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 149 G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g 228 (248)
T PRK09580 149 GEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSG 228 (248)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeC
Confidence 999999999999999999999999999999999999999987654 6899999999999987 7999999999999999
Q ss_pred ChhHH
Q 000845 1227 EPKKL 1231 (1255)
Q Consensus 1227 ~~~eL 1231 (1255)
++++.
T Consensus 229 ~~~~~ 233 (248)
T PRK09580 229 DFTLV 233 (248)
T ss_pred CHHHH
Confidence 98854
No 333
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.6e-35 Score=386.27 Aligned_cols=100 Identities=25% Similarity=0.346 Sum_probs=90.2
Q ss_pred Cccch-hcCCCCCCChhHHHHHHHHHHHc---cCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhh
Q 000845 1135 GLDSL-VVQDGANWSMGQRQLIGLGRVVL---RRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVM 1209 (1255)
Q Consensus 1135 gldt~-v~e~G~~LSgGQrQrl~lARAlL---~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~ 1209 (1255)
|++.. .+....+||||||||++|||||+ ++|++|||||||++||+.+.+.+.+.|++.. .+.|||+|+|+++.+.
T Consensus 797 GL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~ 876 (1809)
T PRK00635 797 GLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVK 876 (1809)
T ss_pred CCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 66554 56777889999999999999998 5999999999999999999999999998864 4789999999999997
Q ss_pred hcCEEEEEe------CCEEEEEcChhHHhhc
Q 000845 1210 DCNMVLSMS------DGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1210 ~~DrI~vl~------~G~ive~G~~~eLl~~ 1234 (1255)
.||+|++|+ +|++++.|+|+++...
T Consensus 877 ~aDrVi~L~p~gg~~~G~iv~~Gtpeel~~~ 907 (1809)
T PRK00635 877 VADYVLELGPEGGNLGGYLLASCSPEELIHL 907 (1809)
T ss_pred hCCEEEEEccCCCCCCCEEEEeCCHHHHHhc
Confidence 799999996 7999999999999864
No 334
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.3e-36 Score=326.48 Aligned_cols=194 Identities=24% Similarity=0.339 Sum_probs=165.8
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.... ..+|++++|
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999953 46999999999999999999999999999999999999999999999999987643 467889999
Q ss_pred EccCCccC-CCchhhhcccCCC-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHH
Q 000845 1084 IPQDPTLF-SGSVRYNLDPLSQ-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVV 1161 (1255)
Q Consensus 1084 vpQdp~Lf-~gTIr~Nl~~~~~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAl 1161 (1255)
+||++.++ ..|+++|+..... ..++++.+ +++..++.++.. +. ..+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~------~l~~~~l~~~~~-------~~----~~~LS~G~~qrl~laral 140 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEE------ALARVGLNGFED-------RP----VAQLSAGQQRRVALARLL 140 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHH------HHHHcCChhhhc-------Cc----hhhCCHHHHHHHHHHHHH
Confidence 99999876 5799999975432 34445544 778888765432 22 247999999999999999
Q ss_pred ccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEE
Q 000845 1162 LRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSM 1217 (1255)
Q Consensus 1162 L~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl 1217 (1255)
+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+...+.. ||+++++
T Consensus 141 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 141 LSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999999999998754 47899999998887655 8999887
No 335
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=7.3e-37 Score=335.55 Aligned_cols=194 Identities=25% Similarity=0.407 Sum_probs=160.6
Q ss_pred eeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCC-Cchhhhc
Q 000845 1021 LRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFS-GSVRYNL 1099 (1255)
Q Consensus 1021 L~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~-gTIr~Nl 1099 (1255)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|+||+|.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 579999999999999999999999999999999999999999999999876543 2489999999988 5999998
Q ss_pred ccC-----CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCC
Q 000845 1100 DPL-----SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEAT 1174 (1255)
Q Consensus 1100 ~~~-----~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~T 1174 (1255)
... ...++++..+ ...++++..++.+... .....||||||||++|||||+++|++|||||||
T Consensus 76 ~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt 142 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRA--IVEEHIALVGLTEAAD-----------KRPGQLSGGMKQRVAIARALSIRPKVLLLDEPF 142 (230)
T ss_pred HHHHHhcccCCCHHHHHH--HHHHHHHHcCCHHHHc-----------CChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 642 1222222111 0012556665544332 233579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1175 ASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1175 S~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|++.+++
T Consensus 143 ~gLD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 143 GALDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred cCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 9999999999999998764 37899999999999876 9999999999999999877663
No 336
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2.2e-36 Score=312.78 Aligned_cols=159 Identities=29% Similarity=0.522 Sum_probs=147.7
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChH-HhhcccE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLY-DLRSNLG 1082 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~-~lR~~i~ 1082 (1255)
|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|++++
T Consensus 1 l~~~~l~~~~~~--~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGG--VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 578999999963 3699999999999999999999999999999999999999999999999999887754 4677899
Q ss_pred EEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHc
Q 000845 1083 IIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVL 1162 (1255)
Q Consensus 1083 ~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL 1162 (1255)
|+|| ||+|||||++||||++
T Consensus 79 ~~~q------------------------------------------------------------LS~G~~qrl~laral~ 98 (163)
T cd03216 79 MVYQ------------------------------------------------------------LSVGERQMVEIARALA 98 (163)
T ss_pred EEEe------------------------------------------------------------cCHHHHHHHHHHHHHh
Confidence 9998 9999999999999999
Q ss_pred cCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEE
Q 000845 1163 RRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1163 ~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1224 (1255)
++|++|+|||||++||+++.+.+.+.|++.. ++.|+|++||+++.+.. ||++++|++|++++
T Consensus 99 ~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 99 RNARLLILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999999998764 47899999999998876 99999999999976
No 337
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=8.3e-37 Score=336.50 Aligned_cols=196 Identities=26% Similarity=0.381 Sum_probs=159.3
Q ss_pred CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEc-cCCccC-CCc
Q 000845 1017 APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIP-QDPTLF-SGS 1094 (1255)
Q Consensus 1017 ~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vp-Qdp~Lf-~gT 1094 (1255)
..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...+|++++|+| |++.+| ..|
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~t 111 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLP 111 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCc
Confidence 34699999999999999999999999999999999999999999999999987653 346788999997 667776 469
Q ss_pred hhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEe
Q 000845 1095 VRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLD 1171 (1255)
Q Consensus 1095 Ir~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLD 1171 (1255)
+++|+.... ..+.++..+. ..++++..++.+. +|+.+ ..||||||||++||||++.+|++||||
T Consensus 112 v~e~l~~~~~~~~~~~~~~~~~--~~~~l~~~gl~~~-------~~~~~----~~LS~G~~qrl~la~al~~~p~llllD 178 (236)
T cd03267 112 VIDSFYLLAAIYDLPPARFKKR--LDELSELLDLEEL-------LDTPV----RQLSLGQRMRAEIAAALLHEPEILFLD 178 (236)
T ss_pred HHHHHHHHHHHcCCCHHHHHHH--HHHHHHHcCChhH-------hcCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 999986321 2223332210 0114444444332 23333 469999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1172 EATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1172 E~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
|||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 179 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 179 EPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999998643 6899999999999876 8999999999998765
No 338
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.8e-37 Score=323.94 Aligned_cols=197 Identities=25% Similarity=0.417 Sum_probs=170.6
Q ss_pred eEEEEEEEEEeCCCC-------CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChH
Q 000845 1003 KVEIYDLQIRYRPNA-------PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~-------~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~ 1075 (1255)
-++++|++..|+... -.+++||||+|++||.+||||.|||||||+.++|+|+++|++|+|+++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 478999999996432 25899999999999999999999999999999999999999999999999987766
Q ss_pred HhhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHH-HHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1076 DLRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLRE-VIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1076 ~lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~-~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
.....+++.+ .|+.+|+.+ +..+.| ..||||||||
T Consensus 82 ---------------------------~~~~~~~v~e------lL~~Vgl~~~~~~ryP-----------helSGGQrQR 117 (268)
T COG4608 82 ---------------------------KEERRERVLE------LLEKVGLPEEFLYRYP-----------HELSGGQRQR 117 (268)
T ss_pred ---------------------------hhHHHHHHHH------HHHHhCCCHHHhhcCC-----------cccCchhhhh
Confidence 1112345655 888998765 444443 4699999999
Q ss_pred HHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1155 IGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1155 l~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
++|||||.-+|+++++|||||+||.-.++.|.+.+.+.. .+-|.++|||+++.++. ||||.||..|+|||.|+.+++
T Consensus 118 i~IARALal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~ 197 (268)
T COG4608 118 IGIARALALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEV 197 (268)
T ss_pred HHHHHHHhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHH
Confidence 999999999999999999999999999999999887654 37899999999999998 999999999999999999999
Q ss_pred hhcCChHHHHHHHH
Q 000845 1232 LRRQDSLFAQLVKE 1245 (1255)
Q Consensus 1232 l~~~~~~f~~l~~~ 1245 (1255)
.+++.-.|-+.+-+
T Consensus 198 ~~~p~HpYTk~Ll~ 211 (268)
T COG4608 198 FSNPLHPYTKALLS 211 (268)
T ss_pred hhCCCCHHHHHHHH
Confidence 99988888765544
No 339
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.3e-36 Score=370.21 Aligned_cols=212 Identities=25% Similarity=0.372 Sum_probs=180.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhh-ccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLR-SNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR-~~i 1081 (1255)
.|+++|++++|.. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...++ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999953 4699999999999999999999999999999999999999999999999999887776654 569
Q ss_pred EEEccCCccCCC-chhhhcccCCCCC---hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQFT---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~~s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
+|+||++.+|.. |+++|+.+..... ++.+.+ +++..++.+. ++. ...+||||||||++|
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~------~l~~~~l~~~-------~~~----~~~~LSgG~~qrv~l 151 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQ------LLAALGCQLD-------LDS----SAGSLEVADRQIVEI 151 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHH------HHHHcCCCcc-------ccC----ChhhCCHHHHHHHHH
Confidence 999999998876 9999997532211 122222 5555555322 222 335799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhh
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLR 1233 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~ 1233 (1255)
||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 a~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 152 LRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred HHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 999999999999999999999999999999998764 47899999999999876 99999999999999999998764
No 340
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.8e-36 Score=326.55 Aligned_cols=194 Identities=23% Similarity=0.338 Sum_probs=165.5
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 689999999953 46999999999999999999999999999999999999999999999999987654 456788999
Q ss_pred EccCCccCC-CchhhhcccCCC----CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHH
Q 000845 1084 IPQDPTLFS-GSVRYNLDPLSQ----FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLG 1158 (1255)
Q Consensus 1084 vpQdp~Lf~-gTIr~Nl~~~~~----~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lA 1158 (1255)
++|++.+++ .|+++|+..... ..++++.+ +++..++.++... ....||||||||++||
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~------~l~~~gl~~~~~~-----------~~~~LS~G~~qrl~la 141 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWE------ALAQVGLAGFEDV-----------PVRQLSAGQQRRVALA 141 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHH------HHHHcCCHHHhhC-----------ChhhcCHHHHHHHHHH
Confidence 999998886 599999964321 22334444 7888887654332 2357999999999999
Q ss_pred HHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhc-CEEEEE
Q 000845 1159 RVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDC-NMVLSM 1217 (1255)
Q Consensus 1159 RAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~-DrI~vl 1217 (1255)
||++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+..| +|++++
T Consensus 142 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 142 RLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999999999998764 478999999999999765 778776
No 341
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=5.5e-34 Score=323.43 Aligned_cols=476 Identities=18% Similarity=0.188 Sum_probs=306.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-cchh---HHHHhchhhHhhhHhHHHH
Q 000845 726 VIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTP-VGRI---LSRVSSDLSIIDLDLSIKS 801 (1255)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~~~-~G~i---l~r~s~D~~~id~~l~~~~ 801 (1255)
+..|+++..+.+.+..+..+...-..++...++-..+.++-++. ..||.-+. .++| =.|+++|++..-..+....
T Consensus 125 ~~~~~~~~~~~s~~~a~~ky~~~~L~Lr~R~~ltk~lh~~Y~k~-~~yYkis~~d~ridNPDQrltqDv~kf~~~l~sl~ 203 (659)
T KOG0060|consen 125 LFKYVLLIPGISLLNALLKFTTNELYLRFRKNLTKYLHRLYFKG-FTYYKLSNLDDRIDNPDQRLTQDVEKFCRQLSSLY 203 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHHhcc-ceEEEecccccccCChHHHHhHHHHHHHHHHHHHH
Confidence 34444444444444444444444444444444444443333332 23333322 2333 3588999887666555444
Q ss_pred HHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHHhCc
Q 000845 802 TIAVGTTMAVISTFVVLGA-LTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQN 880 (1255)
Q Consensus 802 ~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~ 880 (1255)
..++...+.++.-....+. ..|+....+...+++...+.+..++..-++.-.+....+...-.-++...+.+.|--|+.
T Consensus 204 s~l~~a~~di~~Y~~~l~~s~g~~gp~~i~~Yf~~~~vi~~~L~~pI~~l~~~qeklEGdfRy~h~rlr~NaE~iAFY~g 283 (659)
T KOG0060|consen 204 SNLLKAPFDLVYYTFRLFESAGWLGPVSIFAYFLIGTVINKTLRGPIVKLTVEQEKLEGDFRYKHSRLRVNAEEIAFYRG 283 (659)
T ss_pred HhhhccceeeehhhhHHhhhcCcccHHHHHHHHHHHHHHHhhhccchhHHHHHHHHhhcchhhheeeeeecchhhhhhcc
Confidence 4444333333322222222 233333333333333344455555554444444444455554555566678888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh--ccCcccHHHHHHHH----HHHHHH
Q 000845 881 EERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALCT---TLL--HKGHKGAGYTGMAL----SFGLSL 951 (1255)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~g~~l----~~~~~~ 951 (1255)
+........+..+..............|+...-+.+..+...+..++. ++. ..+.+++....-.+ .+.+.+
T Consensus 284 ~~~E~~~~~~~f~~Lv~~l~~l~~~r~~l~f~~n~~~Ylg~ilsy~vi~~p~Fs~h~y~~~s~aEL~~~i~~na~~~i~L 363 (659)
T KOG0060|consen 284 GQVEHQRTDQRFRNLVQHLRELMSFRFWLGFIDNIFDYLGGILSYVVIAIPFFSGHVYDDLSPAELSGLISNNAFVFIYL 363 (659)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeeEEeeeeecccccCCcCHHHHHHHHhhhHHHHHHH
Confidence 766655555555555544455556677777766665532221111110 000 12334444332222 223344
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCC-----------------Ccccc-cCCCCCCCCCCCceEEEEEEEEEe
Q 000845 952 NDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSE-----------------APELV-QKNSPAPDWPPTGKVEIYDLQIRY 1013 (1255)
Q Consensus 952 ~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e-----------------~~~~~-~~~~~~~~~p~~g~I~~~nvs~~Y 1013 (1255)
.+.+..++.....+.....-..|+.++++.-.+ ..... ..+..+..||....|+|++|++.-
T Consensus 364 i~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~~G~~~~~~~Dn~i~~e~v~l~t 443 (659)
T KOG0060|consen 364 ISAFGRLVDLSRDLSRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLPPGSGKAEPADNAIEFEEVSLST 443 (659)
T ss_pred HHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCCCCCcccccccceEEeeeeeecC
Confidence 555555555555555555667888877642110 00000 011123457778899999999998
Q ss_pred CCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCC
Q 000845 1014 RPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSG 1093 (1255)
Q Consensus 1014 ~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~g 1093 (1255)
|.+++...+|+||+|+.|+.+-|+||||||||||++.|.|+.+..+|++.--...- -+.+-|+||.|+.=.|
T Consensus 444 Pt~g~~lie~Ls~~V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~~--------~~~lfflPQrPYmt~G 515 (659)
T KOG0060|consen 444 PTNGDLLIENLSLEVPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDGG--------PKDLFFLPQRPYMTLG 515 (659)
T ss_pred CCCCceeeeeeeeEecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccCC--------CCceEEecCCCCcccc
Confidence 76677778889999999999999999999999999999999999999987532110 1458999999999999
Q ss_pred chhhhcc-cC-------CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhc-CCCCCCChhHHHHHHHHHHHccC
Q 000845 1094 SVRYNLD-PL-------SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVV-QDGANWSMGQRQLIGLGRVVLRR 1164 (1255)
Q Consensus 1094 TIr~Nl~-~~-------~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~-e~G~~LSgGQrQrl~lARAlL~~ 1164 (1255)
|+|+.+- |. ...+|++|.+ .|+.++|.+.+.. .+|+|+++. +-...||+||+||||+||.++.+
T Consensus 516 TLRdQvIYP~~~~~~~~~~~~d~~i~r------~Le~v~L~hl~~r-~ggld~~~~~dW~dvLS~GEqQRLa~ARLfy~k 588 (659)
T KOG0060|consen 516 TLRDQVIYPLKAEDMDSKSASDEDILR------ILENVQLGHLLER-EGGLDQQVDWDWMDVLSPGEQQRLAFARLFYHK 588 (659)
T ss_pred chhheeeccCccccccccCCCHHHHHH------HHHHhhhhhHHHH-hCCCCchhhccHHhhcCHHHHHHHHHHHHHhcC
Confidence 9999985 31 1368899988 9999999887765 489997664 45678999999999999999999
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEEeC
Q 000845 1165 RQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSD 1219 (1255)
Q Consensus 1165 ~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~ 1219 (1255)
|++-+|||+|||+|.+.|..+.+.+++ .+-|.|.|.||-+.-+.-|.++-|+.
T Consensus 589 Pk~AiLDE~TSAv~~dvE~~~Yr~~r~--~giT~iSVgHRkSL~kfHd~~L~~~g 641 (659)
T KOG0060|consen 589 PKFAILDECTSAVTEDVEGALYRKCRE--MGITFISVGHRKSLWKFHDYVLRMDG 641 (659)
T ss_pred CceEEeechhhhccHHHHHHHHHHHHH--cCCeEEEeccHHHHHhhhhEEEEecC
Confidence 999999999999999999999999998 58999999999999999999999986
No 342
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=371.67 Aligned_cols=216 Identities=21% Similarity=0.363 Sum_probs=178.0
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCCEEEEcCEeCCCCChHH-hhc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP--TGGKIIIDGLDITTIGLYD-LRS 1079 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~--~~G~I~idG~di~~i~~~~-lR~ 1079 (1255)
-|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.++|.++...+... .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 4899999999953 4699999999999999999999999999999999999996 8999999999998777654 467
Q ss_pred ccEEEccCCccCCC-chhhhcccCCC------CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1080 NLGIIPQDPTLFSG-SVRYNLDPLSQ------FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1080 ~i~~vpQdp~Lf~g-TIr~Nl~~~~~------~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
+++||||+|.+|.. |+++|+.+... .+.++..+ ...++++..++ +........+||||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l-----------~~~~~~~~~~LSgGqk 149 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL--RAQKLLAQLKL-----------DINPATPVGNLGLGQQ 149 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH--HHHHHHHHcCC-----------CCCcccchhhCCHHHH
Confidence 89999999998875 99999974321 11122111 00113444433 2222233457999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
||++|||||+.+|+||||||||++||+++...+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 150 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 229 (506)
T PRK13549 150 QLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAG 229 (506)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeeccccc
Confidence 99999999999999999999999999999999999998864 47899999999999876 99999999999999999988
Q ss_pred Hhh
Q 000845 1231 LLR 1233 (1255)
Q Consensus 1231 Ll~ 1233 (1255)
+..
T Consensus 230 ~~~ 232 (506)
T PRK13549 230 MTE 232 (506)
T ss_pred CCH
Confidence 743
No 343
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-37 Score=297.77 Aligned_cols=220 Identities=26% Similarity=0.424 Sum_probs=186.9
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCC----------
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTI---------- 1072 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i---------- 1072 (1255)
.++++|+..+|... .|||+||++.++|+.|.|+|.|||||||+++++.=+-.|+.|+|.++|..|.-.
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 68899999999654 499999999999999999999999999999999999999999999999876522
Q ss_pred ---ChHHhhcccEEEccCCccCCC-chhhhcc--cCC--CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCC
Q 000845 1073 ---GLYDLRSNLGIIPQDPTLFSG-SVRYNLD--PLS--QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDG 1144 (1255)
Q Consensus 1073 ---~~~~lR~~i~~vpQdp~Lf~g-TIr~Nl~--~~~--~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G 1144 (1255)
..+.+|+++++|+|.-.|.+- |+-||.. |.. ..+..|..+ ..+..|.++|+.+--+.-|
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e--~Ae~~L~kVGi~ek~~~YP----------- 150 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIE--RAEKYLAKVGIAEKADAYP----------- 150 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHH--HHHHHHHHhCchhhhhcCc-----------
Confidence 145689999999999999875 9999984 322 123333222 1123577777776655443
Q ss_pred CCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEE
Q 000845 1145 ANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKL 1222 (1255)
Q Consensus 1145 ~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~i 1222 (1255)
..|||||+||.+|||||.-+|+++++|||||+|||+---.+.+.++++. .|+|+++|||.+.+.++ +..|+.+.+|+|
T Consensus 151 ~~LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~i 230 (256)
T COG4598 151 AHLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKI 230 (256)
T ss_pred cccCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeeccee
Confidence 5799999999999999999999999999999999999999999998865 58999999999999998 799999999999
Q ss_pred EEEcChhHHhhcCCh
Q 000845 1223 VEYDEPKKLLRRQDS 1237 (1255)
Q Consensus 1223 ve~G~~~eLl~~~~~ 1237 (1255)
-|+|+|+++..+|.|
T Consensus 231 EE~G~P~qvf~nP~S 245 (256)
T COG4598 231 EEEGPPEQVFGNPQS 245 (256)
T ss_pred cccCChHHHhcCCCC
Confidence 999999999999876
No 344
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=372.38 Aligned_cols=216 Identities=21% Similarity=0.339 Sum_probs=178.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh-hccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL-RSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l-R~~i 1081 (1255)
-|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999953 469999999999999999999999999999999999999999999999999988776553 5679
Q ss_pred EEEccCCccCCC-chhhhcccCCC-------C---ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQ-------F---TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~-------~---sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
+||||++.+|.. |+++|+..... . +.++..+ ...++++.+++.+ -.+. ...+||||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~gl~~-------~~~~----~~~~LSgG 149 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV--RAAMMLLRVGLKV-------DLDE----KVANLSIS 149 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH--HHHHHHHHcCCCC-------Cccc----chhhCCHH
Confidence 999999998875 99999964210 0 1111111 0011344444321 1233 33579999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcCh
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1228 (1255)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++
T Consensus 150 ~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (510)
T PRK09700 150 HKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMV 229 (510)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecch
Confidence 9999999999999999999999999999999999999998864 47899999999999976 999999999999999999
Q ss_pred hHHhh
Q 000845 1229 KKLLR 1233 (1255)
Q Consensus 1229 ~eLl~ 1233 (1255)
+++..
T Consensus 230 ~~~~~ 234 (510)
T PRK09700 230 SDVSN 234 (510)
T ss_pred hhCCH
Confidence 88754
No 345
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.1e-34 Score=384.49 Aligned_cols=220 Identities=23% Similarity=0.300 Sum_probs=187.3
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
..|+++|++++|+++...+++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.++|.|+.. .....|+.+
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcE
Confidence 3699999999996444579999999999999999999999999999999999999999999999999975 566789999
Q ss_pred EEEccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
+++||++.+|+. |++|||.++. ..+.++..+ ...+.++.++|.+. ......+||||||||++|
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~--~v~~lL~~vgL~~~-----------~~~~~~~LSGGqKQRLsL 1072 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL--EMEAMLEDTGLHHK-----------RNEEAQDLSGGMQRKLSV 1072 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHH
Confidence 999999999975 9999997532 122222211 00125666655433 233345799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcC
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
||||+.+|+|||||||||+||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++.+|.++.
T Consensus 1073 ArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~ 1151 (2272)
T TIGR01257 1073 AIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCF 1151 (2272)
T ss_pred HHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhc
Confidence 99999999999999999999999999999999998778999999999999976 9999999999999999999998753
No 346
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.5e-36 Score=369.80 Aligned_cols=216 Identities=20% Similarity=0.375 Sum_probs=177.0
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH-hhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD-LRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~-lR~~i 1081 (1255)
-|+++|++++|.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999953 46999999999999999999999999999999999999999999999999997665544 36789
Q ss_pred EEEccCCccCCC-chhhhcccCCC-------CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQ-------FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~-------~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
+|+||+|.+|.. |+++|+.+... .+.++..+ ...++++..++.+ -+|.. ..+|||||||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~-------~~~~~----~~~LSgG~~q 148 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA--EADKLLARLNLRF-------SSDKL----VGELSIGEQQ 148 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH--HHHHHHHHcCCCC-------CccCc----hhhCCHHHHH
Confidence 999999988875 99999975311 11121111 0011344444322 12333 3579999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
|++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (501)
T PRK10762 149 MVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADL 228 (501)
T ss_pred HHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcC
Confidence 9999999999999999999999999999999999998763 46899999999999876 899999999999999998876
Q ss_pred hh
Q 000845 1232 LR 1233 (1255)
Q Consensus 1232 l~ 1233 (1255)
..
T Consensus 229 ~~ 230 (501)
T PRK10762 229 TE 230 (501)
T ss_pred CH
Confidence 43
No 347
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-36 Score=300.80 Aligned_cols=213 Identities=22% Similarity=0.381 Sum_probs=184.1
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+.+|++++- .++.+|+++||+++|||.+||+||||||||||+++|.|.+.|++|++.++|.++++.+..++-++-++
T Consensus 2 i~a~nls~~~--~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSL--AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEe--ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 6788998776 34569999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCcc-CCCchhhhcc----cCCC--C--ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1084 IPQDPTL-FSGSVRYNLD----PLSQ--F--TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1084 vpQdp~L-f~gTIr~Nl~----~~~~--~--sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
.||+..| |+=|++|-+. |.+. - .|++|.+ +++.++++..+-... | ..||||||||
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~-----~ala~~d~~~la~R~---y--------~~LSGGEqQR 143 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAA-----QALAATDLSGLAGRD---Y--------RTLSGGEQQR 143 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHH-----HHHHHcChhhhhccc---h--------hhcCchHHHH
Confidence 9999987 8889999875 3321 1 2344544 488888887664321 1 3699999999
Q ss_pred HHHHHHHccC------CCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhh-hcCEEEEEeCCEEEEEc
Q 000845 1155 IGLGRVVLRR------RQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVM-DCNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1155 l~lARAlL~~------~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~ive~G 1226 (1255)
+.+||.|.+- +++|+||||||+||......+.+..|+.. .++.|++|=|+|+... .||||++|.+||++..|
T Consensus 144 VqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g 223 (259)
T COG4559 144 VQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASG 223 (259)
T ss_pred HHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecC
Confidence 9999999863 46999999999999999999999998865 5789999999999875 59999999999999999
Q ss_pred ChhHHhhc
Q 000845 1227 EPKKLLRR 1234 (1255)
Q Consensus 1227 ~~~eLl~~ 1234 (1255)
+|++.+..
T Consensus 224 ~p~~vlt~ 231 (259)
T COG4559 224 SPQDVLTD 231 (259)
T ss_pred CHHHhcCH
Confidence 99999875
No 348
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-36 Score=375.76 Aligned_cols=227 Identities=21% Similarity=0.353 Sum_probs=179.5
Q ss_pred eEEEEEEEEEeCCC--CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCC----------
Q 000845 1003 KVEIYDLQIRYRPN--APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDIT---------- 1070 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~---------- 1070 (1255)
-|+++|++++|+.. ..++|+||||+|++||++||||+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 69999999999532 236999999999999999999999999999999999999999999999998552
Q ss_pred CCChH---Hhh-cccEEEccCC--ccCC-CchhhhcccC----CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccch
Q 000845 1071 TIGLY---DLR-SNLGIIPQDP--TLFS-GSVRYNLDPL----SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSL 1139 (1255)
Q Consensus 1071 ~i~~~---~lR-~~i~~vpQdp--~Lf~-gTIr~Nl~~~----~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~ 1139 (1255)
+.+.. .+| ++|+||+|+| .++. -|+++|+... ...+.++..+ ...++++.+++.+. +..
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~~~l~~~gL~~~--------~~~ 161 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMV--EAKRMLDQVRIPEA--------QTI 161 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHCCCCCh--------hhH
Confidence 22322 334 5799999999 5776 4999999631 1122222211 00125666655211 111
Q ss_pred hcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-C-CcEEEEeccCchhhhh-cCEEEE
Q 000845 1140 VVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-A-NCTVITVAHRIATVMD-CNMVLS 1216 (1255)
Q Consensus 1140 v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~-~~TvI~IaHrl~ti~~-~DrI~v 1216 (1255)
......+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. + ++|||+|||+++.+.. ||||++
T Consensus 162 ~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~v 241 (623)
T PRK10261 162 LSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLV 241 (623)
T ss_pred HhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEE
Confidence 223345799999999999999999999999999999999999999999999875 2 7899999999999876 999999
Q ss_pred EeCCEEEEEcChhHHhhcCChHH
Q 000845 1217 MSDGKLVEYDEPKKLLRRQDSLF 1239 (1255)
Q Consensus 1217 l~~G~ive~G~~~eLl~~~~~~f 1239 (1255)
|++|+|++.|++++++..+...|
T Consensus 242 l~~G~i~~~g~~~~~~~~~~~~~ 264 (623)
T PRK10261 242 MYQGEAVETGSVEQIFHAPQHPY 264 (623)
T ss_pred eeCCeecccCCHHHhhcCCCChh
Confidence 99999999999999986544333
No 349
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.5e-36 Score=324.48 Aligned_cols=195 Identities=24% Similarity=0.266 Sum_probs=163.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
-++++|++++|+. +++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 5999999999953 4599999999999999999999999999999999999999999999999998752 3466799
Q ss_pred EEccCCccCCC-chhhhcccCC---CCCh-HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLS---QFTD-QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~---~~sd-~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
|+||+|.+|.+ |+++|+.... .... +.+.+ +++..++.+. +++.+ .+||||||||++|
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~------~l~~~~l~~~-------~~~~~----~~LS~G~~qrv~l 148 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGS------ALAIVGLAGY-------EDTLV----RQLSAGQKKRLAL 148 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHH------HHHHcCChhh-------ccCCh----hhCCHHHHHHHHH
Confidence 99999999987 9999985321 1122 22222 5555555332 23333 5799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeC
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSD 1219 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~ 1219 (1255)
|||++++|++|+|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||++++++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 149 ARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999999999999999998753 46899999999999976 899999875
No 350
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.2e-36 Score=321.84 Aligned_cols=193 Identities=20% Similarity=0.277 Sum_probs=161.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 689999999963 459999999999999999999999999999999999999999999999999875 34567899999
Q ss_pred EccCCccC-CCchhhhcccCC--CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1084 IPQDPTLF-SGSVRYNLDPLS--QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1084 vpQdp~Lf-~gTIr~Nl~~~~--~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
+||++.++ ..|+++|+.... ...+..+.+ +++..++.+.. +..+ .+||+|||||++||||
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~-------~~~~----~~LS~G~~~rv~lara 141 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITE------LCRLFSLEHLI-------DYPC----GLLSSGQKRQVALLRL 141 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHH------HHHHcCCchhh-------hCCh----hhcCHHHHHHHHHHHH
Confidence 99999987 479999997421 111222333 55555553322 2222 4699999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEE
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLS 1216 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~v 1216 (1255)
++++|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+.+.+.+||.-.+
T Consensus 142 l~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 142 WMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred HhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 999999999999999999999999999999853 57899999999999999987543
No 351
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2.3e-35 Score=324.53 Aligned_cols=163 Identities=23% Similarity=0.354 Sum_probs=125.8
Q ss_pred EEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCC-ccCCCchhhhcccCCC-
Q 000845 1027 TFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDP-TLFSGSVRYNLDPLSQ- 1104 (1255)
Q Consensus 1027 ~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp-~Lf~gTIr~Nl~~~~~- 1104 (1255)
+|..||.+|++||||-||||++++|.|.++|++|+ ..+ -+++|=||-- .-|+||+++-|.-...
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEeecceeecCCCCCcHHHHHHHhhhh
Confidence 45667899999999999999999999999999998 222 3588999933 2388999887642111
Q ss_pred -CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHH
Q 000845 1105 -FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDS 1183 (1255)
Q Consensus 1105 -~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~ 1183 (1255)
+.+.-.+. +..+-.++ +..+...-.+|||||.||++||-||.|++++.+||||++.||.+-.-
T Consensus 429 ~~~~s~~~~-----ei~~pl~l-----------~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~ 492 (591)
T COG1245 429 AFGSSYFKT-----EIVKPLNL-----------EDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRI 492 (591)
T ss_pred hcccchhHH-----hhcCccch-----------HHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHH
Confidence 22221211 13333333 33333344579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeC
Q 000845 1184 ILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSD 1219 (1255)
Q Consensus 1184 ~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~ 1219 (1255)
.+-++||+.. .++|.++|-|++-.+.. +||++|.+.
T Consensus 493 ~vakvIRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~G 531 (591)
T COG1245 493 IVAKVIRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEG 531 (591)
T ss_pred HHHHHHHHHHhhcCceEEEEecceehhhhhhceEEEEec
Confidence 9999998865 46899999999999876 899999964
No 352
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=6.6e-36 Score=365.67 Aligned_cols=212 Identities=18% Similarity=0.199 Sum_probs=180.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
-|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|+.++
T Consensus 3 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSD--TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCC--eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 3899999999953 35999999999999999999999999999999999999999999999999887777777888899
Q ss_pred EEccCCcc--C-------CCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1083 IIPQDPTL--F-------SGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1083 ~vpQdp~L--f-------~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
++||+|.+ + .-|+++|+.... ..++++.+ +++..++.+.... ....|||||||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~l~~~~l~~~~~~-----------~~~~LSgG~~q 142 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDEV-KDPARCEQ------LAQQFGITALLDR-----------RFKYLSTGETR 142 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccch-hHHHHHHH------HHHHcCCHhhhhC-----------CcccCCHHHHH
Confidence 99998753 2 358888875321 11233433 6777776554332 22479999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|+|+++.+.+ ||+|++|++|++++.|+++++
T Consensus 143 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 222 (490)
T PRK10938 143 KTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEI 222 (490)
T ss_pred HHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998864 36899999999999876 999999999999999999988
Q ss_pred hhc
Q 000845 1232 LRR 1234 (1255)
Q Consensus 1232 l~~ 1234 (1255)
...
T Consensus 223 ~~~ 225 (490)
T PRK10938 223 LQQ 225 (490)
T ss_pred hcc
Confidence 753
No 353
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.3e-36 Score=291.41 Aligned_cols=209 Identities=25% Similarity=0.384 Sum_probs=171.9
Q ss_pred eEEEEEEEEEeCCC--CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH---h
Q 000845 1003 KVEIYDLQIRYRPN--APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD---L 1077 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~---l 1077 (1255)
-|+.++++..-+.. .-.+|++|+|.|++||.|||||+||||||||+..|.|+-+|++|+|.+.|.++.+++-+. +
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 57888888776533 235999999999999999999999999999999999999999999999999999998654 4
Q ss_pred h-cccEEEccCCccCCC-chhhhcc-cC---CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1078 R-SNLGIIPQDPTLFSG-SVRYNLD-PL---SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1078 R-~~i~~vpQdp~Lf~g-TIr~Nl~-~~---~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
| +++++|+|.-+|.+. |--||.. |. ++...+.-.. ..+-|+++||.+-+... ..+|||||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~---A~~lL~~vGLg~Rl~Hy-----------P~qLSGGE 151 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAG---AKALLEAVGLGKRLTHY-----------PAQLSGGE 151 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHH---HHHHHHHhCcccccccC-----------ccccCchH
Confidence 5 579999999988764 8889985 32 2211111100 01246666665544443 45799999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhhcCEEEEEeCCEEEEE
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMDCNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1225 (1255)
+||++||||+.-.|+||+-||||-+||.+|.+.|-+.+...- .+.|.++|||++.....|||++-|.+|++++.
T Consensus 152 QQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~~ 227 (228)
T COG4181 152 QQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVED 227 (228)
T ss_pred HHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceeccC
Confidence 999999999999999999999999999999999999887654 47899999999999999999999999999864
No 354
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.7e-36 Score=328.99 Aligned_cols=192 Identities=21% Similarity=0.314 Sum_probs=139.2
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.+-+.||+|.|+.. .|.+++++|-|.--.+||||||+|-|||||+++|.|-++|+.|...=+ -|-+||
T Consensus 586 vLGlH~VtFgy~gq-kpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQ-KPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCCC-CchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 46789999999754 568999999999999999999999999999999999999999976432 255788
Q ss_pred EEccCCc-cCC--CchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1083 IIPQDPT-LFS--GSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1083 ~vpQdp~-Lf~--gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
+.-|... -++ .|--|.|.-.-...-++... +|...||..... |. .-..||||||-|+++|-
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK------~LG~fGL~sHAH-------Ti---kikdLSGGQKaRValae 717 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARK------QLGTFGLASHAH-------TI---KIKDLSGGQKARVALAE 717 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHH------Hhhhhhhhhccc-------eE---eeeecCCcchHHHHHHH
Confidence 8888652 111 12222221100111122221 343333322211 11 11369999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcC-EEEEEeCCEEEE
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCN-MVLSMSDGKLVE 1224 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~D-rI~vl~~G~ive 1224 (1255)
.-++.|+||||||||++||.++-..+-++|+++ +..||+|+|+-..|...| ..+|+++-.|-|
T Consensus 718 Lal~~PDvlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~e 781 (807)
T KOG0066|consen 718 LALGGPDVLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCNLWVVENQGIDE 781 (807)
T ss_pred HhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCceEEEEccCChhh
Confidence 999999999999999999999999999999875 447999999999987643 355666544443
No 355
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-36 Score=302.27 Aligned_cols=164 Identities=31% Similarity=0.478 Sum_probs=137.3
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc--------------------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM-------------------- 503 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~-------------------- 503 (1255)
-|+++|++.+|.. ..+|+|||++|++||.++|+||+||||||||++|.|.-++.+|.
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 4789999999974 46999999999999999999999999999999999999999981
Q ss_pred ------ccCCCCCCC---------------------------ccccc------cCCCcCChHHHHHHHHHHHHccCCCEE
Q 000845 504 ------DLKMLPFGD---------------------------LTQIG------ERGVNLSGGQKQRIQLARALYQDRDIY 544 (1255)
Q Consensus 504 ------Di~~lp~gd---------------------------~T~iG------e~G~~LSGGQkqRIaLARAly~~~~il 544 (1255)
.+..+|+-. ...|| .-...|||||||||||||||.-+|+++
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~P~vm 158 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMDPKVM 158 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCCCCEE
Confidence 122333210 01122 245789999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChhHHhhc
Q 000845 545 LLDDPFSALDAKTAKFLFTEYVMGA-LSKKTVLLVTHQVDFLPA-FDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 545 LLDdp~SaLD~~~~~~i~~~~i~~~-l~~kTvIlvTH~l~~l~~-aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
|+|||||||||+....+.+ ++..+ ..|.|.|+|||.+.|.+. ||+|+.|++|+|+++|+++++..+
T Consensus 159 LFDEPTSALDPElv~EVL~-vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 159 LFDEPTSALDPELVGEVLD-VMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred eecCCcccCCHHHHHHHHH-HHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 9999999999998877754 44444 358999999999999975 599999999999999999988643
No 356
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.4e-35 Score=365.51 Aligned_cols=224 Identities=21% Similarity=0.358 Sum_probs=179.1
Q ss_pred eEEEEEEEEEeCCC--CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCCCChH
Q 000845 1003 KVEIYDLQIRYRPN--APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITTIGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~i~~~ 1075 (1255)
-|+++|++++|+.+ ..++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 24699999999999999999999999999999999999986 799999999999877654
Q ss_pred H---hh-cccEEEccCCc--cCC-CchhhhcccC----CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCC
Q 000845 1076 D---LR-SNLGIIPQDPT--LFS-GSVRYNLDPL----SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDG 1144 (1255)
Q Consensus 1076 ~---lR-~~i~~vpQdp~--Lf~-gTIr~Nl~~~----~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G 1144 (1255)
. +| ++++||||+|. ++. -|+++|+... ...+.++..+ ...++++.+++.+... ......
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~gl~~~~~--------~~~~~~ 154 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARG--EILNCLDRVGIRQAAK--------RLTDYP 154 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHCCCCChHH--------HHhhCC
Confidence 3 34 57999999985 444 4889987521 1122222211 0012666666643110 112233
Q ss_pred CCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCE
Q 000845 1145 ANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGK 1221 (1255)
Q Consensus 1145 ~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1221 (1255)
.+||||||||++|||||+.+|++||||||||+||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|+
T Consensus 155 ~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~ 234 (529)
T PRK15134 155 HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGR 234 (529)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCE
Confidence 5799999999999999999999999999999999999999999998864 37899999999999876 99999999999
Q ss_pred EEEEcChhHHhhcCC
Q 000845 1222 LVEYDEPKKLLRRQD 1236 (1255)
Q Consensus 1222 ive~G~~~eLl~~~~ 1236 (1255)
+++.|++++++..+.
T Consensus 235 i~~~g~~~~~~~~~~ 249 (529)
T PRK15134 235 CVEQNRAATLFSAPT 249 (529)
T ss_pred EEEeCCHHHHhhCCC
Confidence 999999999976543
No 357
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-35 Score=319.64 Aligned_cols=193 Identities=26% Similarity=0.346 Sum_probs=164.0
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. . ..|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~-~~~~~~~~ 77 (207)
T PRK13539 3 LEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--P-DVAEACHY 77 (207)
T ss_pred EEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--h-hhHhhcEE
Confidence 789999999963 359999999999999999999999999999999999999999999999998753 2 27889999
Q ss_pred EccCCccC-CCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1084 IPQDPTLF-SGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1084 vpQdp~Lf-~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
++|++.++ ..|+++|+.... ...++++.+ +++..++.+.... + ...||||||||++|||
T Consensus 78 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~-~----------~~~LS~G~~qrl~la~ 140 (207)
T PRK13539 78 LGHRNAMKPALTVAENLEFWAAFLGGEELDIAA------ALEAVGLAPLAHL-P----------FGYLSAGQKRRVALAR 140 (207)
T ss_pred ecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHH------HHHHcCCHHHHcC-C----------hhhcCHHHHHHHHHHH
Confidence 99988775 579999986422 223444554 7888887654322 1 2469999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEEEeC
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLSMSD 1219 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~ 1219 (1255)
|++++|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. |+++.++.
T Consensus 141 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 141 LLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 9999999999999999999999999999998753 57899999999999988 99988754
No 358
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=361.66 Aligned_cols=211 Identities=22% Similarity=0.318 Sum_probs=173.3
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh-HHhhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL-YDLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~-~~lR~~i 1081 (1255)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. ..+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999953 459999999999999999999999999999999999999999999999999976543 3467899
Q ss_pred EEEccCCccCCC-chhhhcccCC-----C-CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLS-----Q-FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~-----~-~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
+||||+|.+|.+ |+++|+.... . ...++..+ ...++++.+++ +........+||||||||
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l-----------~~~~~~~~~~LSgGq~qr 148 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY--EAREQLEHLGV-----------DIDPDTPLKYLSIGQRQM 148 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH--HHHHHHHHcCC-----------CCCcCCchhhCCHHHHHH
Confidence 999999998876 9999997421 1 11122111 00114444443 222223345799999999
Q ss_pred HHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcCh
Q 000845 1155 IGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1155 l~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1228 (1255)
++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.+++
T Consensus 149 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 149 VEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred HHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 999999999999999999999999999999999998764 47899999999999876 999999999999987764
No 359
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=361.87 Aligned_cols=212 Identities=19% Similarity=0.336 Sum_probs=173.9
Q ss_pred EEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh-HHhhcccEEE
Q 000845 1006 IYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL-YDLRSNLGII 1084 (1255)
Q Consensus 1006 ~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~-~~lR~~i~~v 1084 (1255)
++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++++||
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999953 469999999999999999999999999999999999999999999999999976654 3457889999
Q ss_pred ccCCccCC-CchhhhcccCC----C--CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1085 PQDPTLFS-GSVRYNLDPLS----Q--FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1085 pQdp~Lf~-gTIr~Nl~~~~----~--~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
||++.+|. .|+++|+.... . .+.++..+ ...+.++.+ |++........+||||||||++|
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~l 145 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----------DTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEI 145 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH-----------HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHH
Confidence 99998776 49999997421 1 12222211 111222222 33333334456899999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
||||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 146 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 146 AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred HHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 999999999999999999999999999999998864 47899999999999876 9999999999999999988864
No 360
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.2e-35 Score=318.68 Aligned_cols=192 Identities=23% Similarity=0.306 Sum_probs=160.9
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...|+.++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 578999999953 46999999999999999999999999999999999999999999999999988765 456789999
Q ss_pred EccCCccCC-CchhhhcccCCC-CC--hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1084 IPQDPTLFS-GSVRYNLDPLSQ-FT--DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1084 vpQdp~Lf~-gTIr~Nl~~~~~-~s--d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
+||++.+|. .|+++|+..... .. ++++.+ +++..++.++... . ..+||||||||++|||
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~------~l~~~~l~~~~~~-------~----~~~LS~G~~qrv~la~ 140 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIED------ALAAVGLTGFEDL-------P----AAQLSAGQQRRLALAR 140 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHH------HHHHcCCHHHhcC-------C----hhhcCHHHHHHHHHHH
Confidence 999999886 699999964321 11 223444 7778887665432 2 2479999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHH-cCCcEEEEeccCchhhhhcCEEEE
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRRE-FANCTVITVAHRIATVMDCNMVLS 1216 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~-~~~~TvI~IaHrl~ti~~~DrI~v 1216 (1255)
|++++|+++||||||++||+.+.+.+.+.|++. ..+.|+|++||+...+ .||+++.
T Consensus 141 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~-~~~~~~~ 197 (198)
T TIGR01189 141 LWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGL-VEARELR 197 (198)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccccc-cceEEee
Confidence 999999999999999999999999999999875 3578999999998544 3476654
No 361
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.8e-35 Score=324.21 Aligned_cols=198 Identities=23% Similarity=0.356 Sum_probs=160.1
Q ss_pred EEEEEEEEEeCC----C-CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEc--C--EeCCCCCh
Q 000845 1004 VEIYDLQIRYRP----N-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIID--G--LDITTIGL 1074 (1255)
Q Consensus 1004 I~~~nvs~~Y~~----~-~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~id--G--~di~~i~~ 1074 (1255)
|+++|++++|+. + ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+| | .++..++.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999953 1 2469999999999999999999999999999999999999999999998 4 36666665
Q ss_pred HH---h-hcccEEEccCCccCCC-chhhhcccC---CCCCh----HHHHhccCchhHHHhccHHHHHHhhhcCccchhcC
Q 000845 1075 YD---L-RSNLGIIPQDPTLFSG-SVRYNLDPL---SQFTD----QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQ 1142 (1255)
Q Consensus 1075 ~~---l-R~~i~~vpQdp~Lf~g-TIr~Nl~~~---~~~sd----~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e 1142 (1255)
.. + +++++|+||+|.+|.. |+++|+... ..... +++.+ +++..++.+.. ...
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~----------~~~ 145 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARE------LLARLNIPERL----------WHL 145 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHH------HHHHcCCchhh----------hhC
Confidence 43 3 4679999999998875 999998631 11211 12222 45555443221 122
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEE
Q 000845 1143 DGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSM 1217 (1255)
Q Consensus 1143 ~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl 1217 (1255)
.+.+||||||||++||||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|+.+
T Consensus 146 ~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 146 PPATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 346799999999999999999999999999999999999999999998864 47899999999998864 9999876
No 362
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2e-35 Score=362.30 Aligned_cols=215 Identities=22% Similarity=0.359 Sum_probs=174.7
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCCEEEEcCEeCCCCChHH-hhcc
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP--TGGKIIIDGLDITTIGLYD-LRSN 1080 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~--~~G~I~idG~di~~i~~~~-lR~~ 1080 (1255)
|+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999953 4599999999999999999999999999999999999987 7999999999998877654 4678
Q ss_pred cEEEccCCccCCC-chhhhcccCCC-------CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1081 LGIIPQDPTLFSG-SVRYNLDPLSQ-------FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1081 i~~vpQdp~Lf~g-TIr~Nl~~~~~-------~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
++||||+|.+|.. |+++|+..... ...++..+ ...++++..++.+.. .+.. ...||||||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~------~~~~----~~~LSgG~~ 147 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL--RAKNLLRELQLDADN------VTRP----VGDYGGGQQ 147 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH--HHHHHHHHcCCCCCc------ccCc----hhhCCHHHH
Confidence 9999999988875 99999964211 11111111 001134444332110 1222 347999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
||++|||||+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 148 qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (500)
T TIGR02633 148 QLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMST 227 (500)
T ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCccc
Confidence 99999999999999999999999999999999999998753 47899999999999976 99999999999999998876
Q ss_pred Hh
Q 000845 1231 LL 1232 (1255)
Q Consensus 1231 Ll 1232 (1255)
..
T Consensus 228 ~~ 229 (500)
T TIGR02633 228 MS 229 (500)
T ss_pred CC
Confidence 53
No 363
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=325.95 Aligned_cols=216 Identities=26% Similarity=0.354 Sum_probs=172.5
Q ss_pred eEEEEEEEEEeCC------------------CCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEE
Q 000845 1003 KVEIYDLQIRYRP------------------NAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIII 1064 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~------------------~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~i 1064 (1255)
.|+++||+..|+. ...++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 5788888877743 1235999999999999999999999999999999999999999999999
Q ss_pred cCEeCCCCChHHhhcccEEEccCCccCC-CchhhhcccC---CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchh
Q 000845 1065 DGLDITTIGLYDLRSNLGIIPQDPTLFS-GSVRYNLDPL---SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLV 1140 (1255)
Q Consensus 1065 dG~di~~i~~~~lR~~i~~vpQdp~Lf~-gTIr~Nl~~~---~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v 1140 (1255)
||. +++++|++.+++ .|+++|+... ...+.++..+. ...+++..++. ..+
T Consensus 84 ~g~-------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~--~~~~l~~~~l~-----------~~~ 137 (264)
T PRK13546 84 NGE-------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAM--TPKIIEFSELG-----------EFI 137 (264)
T ss_pred CCE-------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHH--HHHHHHHcCCc-----------hhh
Confidence 994 456788876664 5999998632 12333333220 01133333333 333
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEe
Q 000845 1141 VQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMS 1218 (1255)
Q Consensus 1141 ~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~ 1218 (1255)
......||+|||||++||||++++|+||||||||++||+.+.+.+.+.|.+.. .++|+|++||+++.+.. ||+|++|+
T Consensus 138 ~~~~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~ 217 (264)
T PRK13546 138 YQPVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIE 217 (264)
T ss_pred cCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEE
Confidence 34456899999999999999999999999999999999999999999998753 47899999999999876 99999999
Q ss_pred CCEEEEEcChhHHhhcCChHHHHHHH
Q 000845 1219 DGKLVEYDEPKKLLRRQDSLFAQLVK 1244 (1255)
Q Consensus 1219 ~G~ive~G~~~eLl~~~~~~f~~l~~ 1244 (1255)
+|++++.|++++++++....|+.+.+
T Consensus 218 ~G~i~~~g~~~~~~~~~~~~~~~~~~ 243 (264)
T PRK13546 218 GGKLKDYGELDDVLPKYEAFLNDFKK 243 (264)
T ss_pred CCEEEEeCCHHHHHHHhHHHHHHHHh
Confidence 99999999999999875554544443
No 364
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3.9e-35 Score=364.68 Aligned_cols=203 Identities=25% Similarity=0.353 Sum_probs=168.5
Q ss_pred CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC--CCEEEEcCEeCCCCChHHhhcccEEEccCCccCCC-c
Q 000845 1018 PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT--GGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSG-S 1094 (1255)
Q Consensus 1018 ~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~--~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~g-T 1094 (1255)
+.+|+|+|++++|||++||+||||||||||+++|.|+.+|+ +|+|.+||.++.. ..+++++||||++.+|.. |
T Consensus 81 ~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~~----~~~~~i~yv~Q~~~l~~~lT 156 (659)
T PLN03211 81 RTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPTK----QILKRTGFVTQDDILYPHLT 156 (659)
T ss_pred CeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECch----hhccceEEECcccccCCcCC
Confidence 46999999999999999999999999999999999999885 8999999998742 456789999999999964 9
Q ss_pred hhhhcccCC------CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCC-CCCCChhHHHHHHHHHHHccCCCe
Q 000845 1095 VRYNLDPLS------QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQD-GANWSMGQRQLIGLGRVVLRRRQI 1167 (1255)
Q Consensus 1095 Ir~Nl~~~~------~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~-G~~LSgGQrQrl~lARAlL~~~~I 1167 (1255)
++||+.+.. ..++++..+. ..+.++..+|. +..||.+|+. ...||||||||++|||||+++|+|
T Consensus 157 V~E~l~~~a~~~~~~~~~~~~~~~~--v~~~l~~lgL~-------~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~i 227 (659)
T PLN03211 157 VRETLVFCSLLRLPKSLTKQEKILV--AESVISELGLT-------KCENTIIGNSFIRGISGGERKRVSIAHEMLINPSL 227 (659)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHH--HHHHHHHcCCh-------hhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCE
Confidence 999996421 2233332210 01134444432 3347777653 568999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchh-hh-hcCEEEEEeCCEEEEEcChhHHhh
Q 000845 1168 LVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIAT-VM-DCNMVLSMSDGKLVEYDEPKKLLR 1233 (1255)
Q Consensus 1168 LiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~t-i~-~~DrI~vl~~G~ive~G~~~eLl~ 1233 (1255)
|+|||||++||+.+...+.+.|++.. +++|||+++|+++. +. .||+|++|++|++++.|+++++..
T Consensus 228 LlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~ 296 (659)
T PLN03211 228 LILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMA 296 (659)
T ss_pred EEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHH
Confidence 99999999999999999999999865 58999999999984 54 599999999999999999999864
No 365
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-35 Score=340.62 Aligned_cols=214 Identities=22% Similarity=0.319 Sum_probs=171.6
Q ss_pred eEEEEEEEEEeCCCC-CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhccc
Q 000845 1003 KVEIYDLQIRYRPNA-PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~-~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i 1081 (1255)
.++++|++++|+.+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.+.
T Consensus 21 mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~------------ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA------------ 88 (549)
T ss_pred eeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee------------
Confidence 589999999996532 4699999999999999999999999999999999999999999999999762
Q ss_pred EEEccCCccCC-CchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHH
Q 000845 1082 GIIPQDPTLFS-GSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGL 1157 (1255)
Q Consensus 1082 ~~vpQdp~Lf~-gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~l 1157 (1255)
++++.+.++. .|+++|+.... ..++++..+ ...++++.+++.++... ....||||||||++|
T Consensus 89 -~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e--~i~elLe~lgL~~~ld~-----------~~~~LSGGQrQRVaL 154 (549)
T PRK13545 89 -LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKE--IIPEIIEFADIGKFIYQ-----------PVKTYSSGMKSRLGF 154 (549)
T ss_pred -eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHH--HHHHHHHHcCChhHhhC-----------CcccCCHHHHHHHHH
Confidence 2333444443 49999986422 233333321 00125666666555433 235799999999999
Q ss_pred HHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcC
Q 000845 1158 GRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1158 ARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++..+.
T Consensus 155 ArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~~ 234 (549)
T PRK13545 155 AISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDHY 234 (549)
T ss_pred HHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhhH
Confidence 999999999999999999999999999999998764 47899999999999976 9999999999999999999998752
Q ss_pred ChHHHHHH
Q 000845 1236 DSLFAQLV 1243 (1255)
Q Consensus 1236 ~~~f~~l~ 1243 (1255)
..|...+
T Consensus 235 -~~~~~~~ 241 (549)
T PRK13545 235 -DEFLKKY 241 (549)
T ss_pred -HHHHHHH
Confidence 3444433
No 366
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-32 Score=293.81 Aligned_cols=469 Identities=18% Similarity=0.171 Sum_probs=314.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000845 118 LRALISCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEIIFKYEIYSLAISLFLVKCVES-LAGRHWFFQSRLTG 196 (1255)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 196 (1255)
.-.++|.+++.++....+.+...+... .++..+-+++-+.+...-....+.+++++..++.+ ++.--..+.++...
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~g~~g~---~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~is~lg~t~~gq~~I 80 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLASGALGI---GLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLISQLGLTTLGQHFI 80 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888888776666555544333 33333334443322111111122233333333322 22223344555566
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhccCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000845 197 LKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFWFHQIWSTSLQLCIAVVVVYYSVGLATIATLIV 276 (1255)
Q Consensus 197 ~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~v~~~lL~~~lG~~~l~g~~~ 276 (1255)
.++|..+...| +.-+.......+++.+..-++.|+..|.-.+..+.++..+.+-+..+..+|++.-+..++++++.
T Consensus 81 ~klr~~~~~ki----l~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ 156 (546)
T COG4615 81 YKLRSEFIKKI----LDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVW 156 (546)
T ss_pred HHHHHHHHHHH----hcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 67776665544 43333344456788899999999999998888888777666666677777877666677788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhCc--hHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q 000845 277 MILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAW--DSYFKNVI-EKLRSEEYGWLKVLQLQKGYY 353 (1255)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~w--E~~~~~~i-~~~R~~El~~~~~~~~~~~~~ 353 (1255)
+++.+..+++..++.-++..+..+.-|+-.+..+.++.|-|-.|.+.= +..+.+.+ .+.++.+-. ..+...+.
T Consensus 157 ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~~----~~~~n~f~ 232 (546)
T COG4615 157 IVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRHH----IIRANTFH 232 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHhh----hhhhhHHH
Confidence 888888888888888888888888889999999999999999998762 22233332 223332221 11112221
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q 000845 354 -MVLFWSSPILIGAATLLTCYFLGIPLN-PSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQNSD 431 (1255)
Q Consensus 354 -~~~~~~~~~~~~~~~f~~~~~~~~~L~-~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~ 431 (1255)
....|....+..++....|+...-... ...+.|....+-.++.|+.++...++.+..|.++++||.++=..|+..+-.
T Consensus 233 ~la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~ 312 (546)
T COG4615 233 LLAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFP 312 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCC
Confidence 112222222222222222222111111 223444444556679999999999999999999999999987766543322
Q ss_pred hhcccccccCcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc--------
Q 000845 432 MQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM-------- 503 (1255)
Q Consensus 432 ~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~-------- 503 (1255)
.+ .+ .|.=..++++|+.|+|+... +-+.-||++|++||++.++|.|||||||++++|+|.+.|.+|+
T Consensus 313 ~~-q~--~p~~~~lelrnvrfay~~~~--FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV 387 (546)
T COG4615 313 RP-QA--FPDWKTLELRNVRFAYQDNA--FHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPV 387 (546)
T ss_pred CC-Cc--CCcccceeeeeeeeccCccc--ceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCccC
Confidence 11 11 11234699999999998653 7889999999999999999999999999999999999999991
Q ss_pred -----------------ccCCCC---CCC-------------------ccccccC---CCcCChHHHHHHHHHHHHccCC
Q 000845 504 -----------------DLKMLP---FGD-------------------LTQIGER---GVNLSGGQKQRIQLARALYQDR 541 (1255)
Q Consensus 504 -----------------Di~~lp---~gd-------------------~T~iGe~---G~~LSGGQkqRIaLARAly~~~ 541 (1255)
|...+| .++ .|.+-++ -..||-|||.|+|+--|+.-+.
T Consensus 388 ~~e~ledYR~LfSavFsDyhLF~~ll~~e~~as~q~i~~~LqrLel~~ktsl~d~~fs~~kLStGQkKRlAll~AllEeR 467 (546)
T COG4615 388 SAEQLEDYRKLFSAVFSDYHLFDQLLGPEGKASPQLIEKWLQRLELAHKTSLNDGRFSNLKLSTGQKKRLALLLALLEER 467 (546)
T ss_pred CCCCHHHHHHHHHHHhhhHhhhHhhhCCccCCChHHHHHHHHHHHHhhhhcccCCcccccccccchHHHHHHHHHHHhhC
Confidence 111111 111 1222222 2469999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCccccCCEEEEEeCCEEEEe
Q 000845 542 DIYLLDDPFSALDAKTAKFLFTEYVMGA-LSKKTVLLVTHQVDFLPAFDSILLISGGEIIQA 602 (1255)
Q Consensus 542 ~ilLLDdp~SaLD~~~~~~i~~~~i~~~-l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~ 602 (1255)
|||+|||=-+--||+=+++-++..+-.+ ..|||++.|||+-.+..+|||++.|++|++++.
T Consensus 468 ~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 468 DILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred CeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 9999999999999999887776666333 259999999999999999999999999999875
No 367
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=366.27 Aligned_cols=217 Identities=25% Similarity=0.383 Sum_probs=182.1
Q ss_pred eEEEEEEEEEeCCC--CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHh---
Q 000845 1003 KVEIYDLQIRYRPN--APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDL--- 1077 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~--~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~l--- 1077 (1255)
-++++|++++|+.+ .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+..++
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 48999999999642 2469999999999999999999999999999999999999999999999999999887664
Q ss_pred -hcccEEEccCCccCCC-chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1078 -RSNLGIIPQDPTLFSG-SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1078 -R~~i~~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
|+.++|+||+|.+|++ |+.||+.... ..+.++..+ ...+.++..++. ..+.....+||+||+
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~--~~~~~l~~lgl~-----------~~~~~~~~~LS~Gq~ 150 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQRLL--RAQELLQRLGLE-----------DRVEYQPSQLSGGQQ 150 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHCCCh-----------hhhcCCcccCCHHHH
Confidence 5789999999999975 9999997311 111111110 001144444444 334444568999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEEEeCCEEEEEcChhHH
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eL 1231 (1255)
||++|||||+++|++|||||||++||+++.+.+.+.+++.. +++|+|+|||+++.+..||++++|++|++++.|+++|.
T Consensus 151 qrv~LAraL~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 230 (648)
T PRK10535 151 QRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQEK 230 (648)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCcccc
Confidence 99999999999999999999999999999999999998764 47899999999999988999999999999999999988
Q ss_pred h
Q 000845 1232 L 1232 (1255)
Q Consensus 1232 l 1232 (1255)
.
T Consensus 231 ~ 231 (648)
T PRK10535 231 V 231 (648)
T ss_pred c
Confidence 6
No 368
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=2e-35 Score=322.64 Aligned_cols=186 Identities=25% Similarity=0.419 Sum_probs=156.4
Q ss_pred EEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCcc---CCCchhhhcccC
Q 000845 1026 CTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTL---FSGSVRYNLDPL 1102 (1255)
Q Consensus 1026 ~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~L---f~gTIr~Nl~~~ 1102 (1255)
|+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..|++++|+||+|.+ |+.|+++|+...
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~-----~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~ 75 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPPAKGTVKVAGASPG-----KGWRHIGYVPQRHEFAWDFPISVAHTVMSG 75 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCccch-----HhhCcEEEecccccccCCCCccHHHHHHhc
Confidence 578999999999999999999999999999999999999998864 357789999999976 457999998532
Q ss_pred C--------CCC---hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEe
Q 000845 1103 S--------QFT---DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLD 1171 (1255)
Q Consensus 1103 ~--------~~s---d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLD 1171 (1255)
. ... ++++.+ +++.+++.+... + ....||||||||++||||++++|++||||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~------~l~~~~l~~~~~-------~----~~~~LS~G~~qrv~laral~~~p~llilD 138 (223)
T TIGR03771 76 RTGHIGWLRRPCVADFAAVRD------ALRRVGLTELAD-------R----PVGELSGGQRQRVLVARALATRPSVLLLD 138 (223)
T ss_pred cccccccccCCcHHHHHHHHH------HHHHhCCchhhc-------C----ChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 1 011 122333 667776654432 2 23469999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1172 EATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1172 E~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|+++ +|++++.|+++++..+
T Consensus 139 EP~~~LD~~~~~~l~~~l~~~~~~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~~~ 202 (223)
T TIGR03771 139 EPFTGLDMPTQELLTELFIELAGAGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQDP 202 (223)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhcCh
Confidence 9999999999999999998765 47899999999998876 9999999 7999999999998764
No 369
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=2.8e-35 Score=313.80 Aligned_cols=177 Identities=27% Similarity=0.442 Sum_probs=145.4
Q ss_pred CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCC--CChHHhhcccEEEccCC--ccCCC
Q 000845 1018 PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITT--IGLYDLRSNLGIIPQDP--TLFSG 1093 (1255)
Q Consensus 1018 ~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~--i~~~~lR~~i~~vpQdp--~Lf~g 1093 (1255)
..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++++|+||+| .+|..
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 84 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLFAA 84 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhccccc
Confidence 469999999999999999999999999999999999999999999999999852 23446788999999998 57888
Q ss_pred chhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEE
Q 000845 1094 SVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVL 1170 (1255)
Q Consensus 1094 TIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiL 1170 (1255)
|+++|+.... ..++++..+ ...++++.+++.+..... ...||||||||++|||||+++|++|||
T Consensus 85 tv~~nl~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~laral~~~p~llll 151 (190)
T TIGR01166 85 DVDQDVAFGPLNLGLSEAEVER--RVREALTAVGASGLRERP-----------THCLSGGEKKRVAIAGAVAMRPDVLLL 151 (190)
T ss_pred cHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCchhhhhCC-----------hhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999996421 123222211 001266666665544332 357999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchh
Q 000845 1171 DEATASIDNATDSILQNTIRREF-ANCTVITVAHRIAT 1207 (1255)
Q Consensus 1171 DE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~t 1207 (1255)
||||++||+.+.+.+.+.|++.. +++|+|+|||+++.
T Consensus 152 DEPt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 152 DEPTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 99999999999999999998864 47899999999875
No 370
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3.8e-35 Score=361.31 Aligned_cols=216 Identities=23% Similarity=0.413 Sum_probs=172.9
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccC--CCCCCEEEEc----------------
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLV--EPTGGKIIID---------------- 1065 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~--~~~~G~I~id---------------- 1065 (1255)
|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG--KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC--eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 578999999953 46999999999999999999999999999999999996 7999999997
Q ss_pred -------CEeCC-------CCC---hHHhhcccEEEccC-CccCCC-chhhhcccC---CCCChHHHHhccCchhHHHhc
Q 000845 1066 -------GLDIT-------TIG---LYDLRSNLGIIPQD-PTLFSG-SVRYNLDPL---SQFTDQEIWEVTIPSQVLEKC 1123 (1255)
Q Consensus 1066 -------G~di~-------~i~---~~~lR~~i~~vpQd-p~Lf~g-TIr~Nl~~~---~~~sd~ei~~~~~~~~al~~~ 1123 (1255)
|.++. ..+ ...+|++++|+||+ +.+|+. |+++|+.+. .....++..+ ...++++.+
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~ 156 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVG--RAVDLIEMV 156 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHc
Confidence 33331 111 13467889999998 577764 999999631 1122222211 001256666
Q ss_pred cHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEe
Q 000845 1124 QLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITV 1201 (1255)
Q Consensus 1124 ~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~I 1201 (1255)
++.+... ....+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|++.. .++|||+|
T Consensus 157 gl~~~~~-----------~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviiv 225 (520)
T TIGR03269 157 QLSHRIT-----------HIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLT 225 (520)
T ss_pred CChhhhh-----------cCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEE
Confidence 6644432 2335799999999999999999999999999999999999999999998864 37899999
Q ss_pred ccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1202 AHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1202 aHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 226 tHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 259 (520)
T TIGR03269 226 SHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV 259 (520)
T ss_pred eCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH
Confidence 999999976 999999999999999999888653
No 371
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.3e-35 Score=312.14 Aligned_cols=188 Identities=17% Similarity=0.342 Sum_probs=157.1
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|+. +.++ ++||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.. ++.++|
T Consensus 2 l~~~~l~~~~~~--~~l~-~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~----~~~~~~ 74 (195)
T PRK13541 2 LSLHQLQFNIEQ--KNLF-DLSITFLPSAITYIKGANGCGKSSLLRMIAGIMQPSSGNIYYKNCNINNIA----KPYCTY 74 (195)
T ss_pred eEEEEeeEEECC--cEEE-EEEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCcccChhh----hhhEEe
Confidence 689999999953 3455 599999999999999999999999999999999999999999999986543 456999
Q ss_pred EccCCcc-CCCchhhhcccCCC-C-ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1084 IPQDPTL-FSGSVRYNLDPLSQ-F-TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1084 vpQdp~L-f~gTIr~Nl~~~~~-~-sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
+||++.+ |..|+++|+..... . .++++.+ +++.+++.+... ..+.+||||||||++||||
T Consensus 75 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~------~l~~~~l~~~~~-----------~~~~~LS~G~~~rl~la~a 137 (195)
T PRK13541 75 IGHNLGLKLEMTVFENLKFWSEIYNSAETLYA------AIHYFKLHDLLD-----------EKCYSLSSGMQKIVAIARL 137 (195)
T ss_pred ccCCcCCCccCCHHHHHHHHHHhcccHHHHHH------HHHHcCCHhhhc-----------cChhhCCHHHHHHHHHHHH
Confidence 9998754 67899999964321 1 2334444 667777655432 2346799999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHHHHHHH-cCCcEEEEeccCchhhhhcCEEE
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQNTIRRE-FANCTVITVAHRIATVMDCNMVL 1215 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~-~~~~TvI~IaHrl~ti~~~DrI~ 1215 (1255)
++++|++++|||||++||+.+.+.+.+.|++. .+++|+|+|||+++.+..+|.|.
T Consensus 138 l~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~ 193 (195)
T PRK13541 138 IACQSDLWLLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLESSIKSAQILQ 193 (195)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCccccchhheec
Confidence 99999999999999999999999999999753 35799999999999999998763
No 372
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=7.1e-35 Score=318.26 Aligned_cols=197 Identities=23% Similarity=0.313 Sum_probs=154.5
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
+.++|++.+|.. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ....+
T Consensus 23 l~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~-----~~~~~- 94 (224)
T cd03220 23 LGILGRKGEVGE--FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLL-----GLGGG- 94 (224)
T ss_pred hhhhhhhhhcCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchhh-----ccccc-
Confidence 677888888853 5699999999999999999999999999999999999999999999999986421 11111
Q ss_pred EccCCccCCCchhhhcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1084 IPQDPTLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1084 vpQdp~Lf~gTIr~Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
+..+.|+++|+.... ..+.++..+ ...++++..++.+. +++.+ ..||||||||++||||
T Consensus 95 -----~~~~~tv~enl~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~-------~~~~~----~~LSgG~~qrv~lara 156 (224)
T cd03220 95 -----FNPELTGRENIYLNGRLLGLSRKEIDE--KIDEIIEFSELGDF-------IDLPV----KTYSSGMKARLAFAIA 156 (224)
T ss_pred -----CCCCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCChhh-------hhCCh----hhCCHHHHHHHHHHHH
Confidence 223569999986321 112222111 00114444444332 23333 5799999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEc
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1226 (1255)
++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 157 l~~~p~llllDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 157 TALEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999999998764 35899999999999875 9999999999998865
No 373
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=334.09 Aligned_cols=211 Identities=25% Similarity=0.386 Sum_probs=177.3
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHH-hhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYD-LRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~-lR~~i 1081 (1255)
-++++|++.+|++ -.+|+||||+++|||..|++|.||||||||+|.|.|.|+|++|+|.+||....-.++.+ .+..|
T Consensus 8 ll~~~~i~K~Fgg--V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 8 LLELRGISKSFGG--VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred eeeeecceEEcCC--ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 5889999999964 36999999999999999999999999999999999999999999999999998777666 56679
Q ss_pred EEEccCCccCCC-chhhhcccCCCC-------ChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQF-------TDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~~-------sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
++|.||+.|++. ||.|||-...+. +..++.+. ..++++..++. ...|++|+ +||+||||
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~--A~~~l~~lg~~-------~~~~~~v~----~LsiaqrQ 152 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRR--ARELLARLGLD-------IDPDTLVG----DLSIAQRQ 152 (500)
T ss_pred EEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHH--HHHHHHHcCCC-------CChhhhhh----hCCHHHHH
Confidence 999999999976 999999544332 22333220 01133333322 22667775 69999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcCh
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1228 (1255)
.+.||||+..+++|||||||||+|+..-.+.+.+.+++.. +|.++|+||||++.+.. ||||.||.+|+.+..+..
T Consensus 153 ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~ 229 (500)
T COG1129 153 MVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPT 229 (500)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeeccc
Confidence 9999999999999999999999999988888888888875 68999999999999977 999999999999988773
No 374
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=275.37 Aligned_cols=226 Identities=23% Similarity=0.381 Sum_probs=186.6
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCE--eCCCCCh----HH
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGL--DITTIGL----YD 1076 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~--di~~i~~----~~ 1076 (1255)
.|+++|+++.|.. ..+|-||+|+-+.||.+.+.||||+|||||++.|-=+--|.+|+..|.|. |.++.+. ..
T Consensus 2 sirv~~in~~yg~--~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k~i~~ 79 (242)
T COG4161 2 SIQLNGINCFYGA--HQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRD 79 (242)
T ss_pred ceEEccccccccc--chheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccHHHHHH
Confidence 4889999999964 35899999999999999999999999999999999888999999999875 5555553 46
Q ss_pred hhcccEEEccCCccCCC-chhhhcc--cCC--CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhH
Q 000845 1077 LRSNLGIIPQDPTLFSG-SVRYNLD--PLS--QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQ 1151 (1255)
Q Consensus 1077 lR~~i~~vpQdp~Lf~g-TIr~Nl~--~~~--~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1151 (1255)
||+.+|+|+|.-.|.+- |+-|||- |.. ..++++-.. ...+.|++..|.++.+..| -.|||||
T Consensus 80 lr~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~--~a~ellkrlrl~~~adr~p-----------lhlsggq 146 (242)
T COG4161 80 LRRNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALA--RAEKLLKRLRLKPYADRYP-----------LHLSGGQ 146 (242)
T ss_pred HHHhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHH--HHHHHHHHhccccccccCc-----------eecccch
Confidence 89999999999999875 9999994 321 234443322 0123567777777776665 3699999
Q ss_pred HHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChh
Q 000845 1152 RQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPK 1229 (1255)
Q Consensus 1152 rQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1229 (1255)
+||++|||||+-+|++|++||||++||||-...|-+.|++.. .|-|-++|||..+..+. +.+|+.|++|+|+|.|++.
T Consensus 147 qqrvaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~va~k~as~vvyme~g~ive~g~a~ 226 (242)
T COG4161 147 QQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDAS 226 (242)
T ss_pred hhhHHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeecCeeEeecchh
Confidence 999999999999999999999999999999999999999876 37799999999999876 8999999999999999987
Q ss_pred HHhhcCChHHHHHH
Q 000845 1230 KLLRRQDSLFAQLV 1243 (1255)
Q Consensus 1230 eLl~~~~~~f~~l~ 1243 (1255)
-.-+-....|++.+
T Consensus 227 ~ft~p~te~f~~yl 240 (242)
T COG4161 227 CFTEPQTEAFKNYL 240 (242)
T ss_pred hccCccHHHHHHHh
Confidence 76543334555443
No 375
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.1e-34 Score=361.76 Aligned_cols=205 Identities=20% Similarity=0.306 Sum_probs=170.9
Q ss_pred CCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CCEEEEcCEeCCCCChHHhhcccEEEccCCccCC-
Q 000845 1017 APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT---GGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFS- 1092 (1255)
Q Consensus 1017 ~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~---~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~- 1092 (1255)
.+++|+|+|++|+|||.+||+||||||||||+++|.|..++. +|+|.+||.+++ ...+|+.++||||++.+|+
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~---~~~~~~~i~yv~Q~~~~~~~ 113 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPID---AKEMRAISAYVQQDDLFIPT 113 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC---HHHHhhhceeeccccccCcc
Confidence 457999999999999999999999999999999999998875 899999999875 3568899999999999995
Q ss_pred CchhhhcccCC------CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCC--CCCCChhHHHHHHHHHHHccC
Q 000845 1093 GSVRYNLDPLS------QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQD--GANWSMGQRQLIGLGRVVLRR 1164 (1255)
Q Consensus 1093 gTIr~Nl~~~~------~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~--G~~LSgGQrQrl~lARAlL~~ 1164 (1255)
.||||||.+.. ..+.++..+ ...+.++..++ ++..||.+|+. +..||||||||++|||||+.+
T Consensus 114 lTV~e~l~f~~~~~~~~~~~~~~~~~--~v~~~l~~lgL-------~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~ 184 (617)
T TIGR00955 114 LTVREHLMFQAHLRMPRRVTKKEKRE--RVDEVLQALGL-------RKCANTRIGVPGRVKGLSGGERKRLAFASELLTD 184 (617)
T ss_pred CcHHHHHHHHHhcCCCCCCCHHHHHH--HHHHHHHHcCc-------hhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcC
Confidence 59999996421 122222211 00113333333 34678999984 468999999999999999999
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCch-hh-hhcCEEEEEeCCEEEEEcChhHHhh
Q 000845 1165 RQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIA-TV-MDCNMVLSMSDGKLVEYDEPKKLLR 1233 (1255)
Q Consensus 1165 ~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~-ti-~~~DrI~vl~~G~ive~G~~~eLl~ 1233 (1255)
|+|++||||||+||+.+...+.+.|++.. +++|+|+++|+++ .+ ..||+|++|++|+++++|+++++.+
T Consensus 185 p~vlllDEPtsgLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~ 256 (617)
T TIGR00955 185 PPLLFCDEPTSGLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVP 256 (617)
T ss_pred CCEEEeeCCCcchhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHH
Confidence 99999999999999999999999999875 4799999999996 44 5599999999999999999998854
No 376
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=352.53 Aligned_cols=214 Identities=19% Similarity=0.306 Sum_probs=165.1
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|. .+|+|
T Consensus 2 l~i~~ls~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~~ 68 (530)
T PRK15064 2 LSTANITMQFGA--KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLGK 68 (530)
T ss_pred EEEEEEEEEeCC--cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEEE
Confidence 789999999953 46999999999999999999999999999999999999999999999972 46999
Q ss_pred EccCCccCCC-chhhhcccCCC-C----------------ChH------HHHhccC-chhHHHhccHHHHHHhhhcCccc
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLSQ-F----------------TDQ------EIWEVTI-PSQVLEKCQLREVIQEKKEGLDS 1138 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~~-~----------------sd~------ei~~~~~-~~~al~~~~l~~~i~~lp~gldt 1138 (1255)
+||++.+|.. |+++|+..... . +.+ +..+... ....-....+.+.+..+ |++.
T Consensus 69 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~ 146 (530)
T PRK15064 69 LRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIPE 146 (530)
T ss_pred EeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCCh
Confidence 9999988865 99999863210 0 000 0000000 00000001112222222 3332
Q ss_pred hh-cCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEE
Q 000845 1139 LV-VQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLS 1216 (1255)
Q Consensus 1139 ~v-~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~v 1216 (1255)
.. .....+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|++ .++|||+|||+++.+.. ||+|++
T Consensus 147 ~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~~ 224 (530)
T PRK15064 147 EQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMAD 224 (530)
T ss_pred hHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEEE
Confidence 22 123467999999999999999999999999999999999999999999975 47899999999999876 999999
Q ss_pred EeCCEEE-EEcChhHHhhc
Q 000845 1217 MSDGKLV-EYDEPKKLLRR 1234 (1255)
Q Consensus 1217 l~~G~iv-e~G~~~eLl~~ 1234 (1255)
|++|+++ +.|++++.++.
T Consensus 225 l~~g~i~~~~g~~~~~~~~ 243 (530)
T PRK15064 225 LDYGELRVYPGNYDEYMTA 243 (530)
T ss_pred EeCCEEEEecCCHHHHHHH
Confidence 9999994 78999988754
No 377
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-35 Score=299.30 Aligned_cols=164 Identities=34% Similarity=0.480 Sum_probs=137.7
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK------------ 506 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~------------ 506 (1255)
|+|+|+++.|.. +.+++|+||+|++||+++++||+||||||+|++|.+.++|++| .|+.
T Consensus 2 I~~~nvsk~y~~---~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYGN---KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcCC---ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 689999999973 5799999999999999999999999999999999999999999 1221
Q ss_pred -------CCCCC---------------Cc-----------c--------ccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 507 -------MLPFG---------------DL-----------T--------QIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 507 -------~lp~g---------------d~-----------T--------~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
.+|+- +. . ....-...|||||+|||.+||||..+|+|+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilL 158 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPILL 158 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEe
Confidence 22210 00 0 1123468899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCc-cccCCEEEEEeCCEEEEecChhHHhhcc
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDF-LPAFDSILLISGGEIIQAATYDHLLVTS 612 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~-l~~aD~Iivl~~G~i~~~G~~~el~~~~ 612 (1255)
+|||||||||.+++.+ ++-+..+. -+||+|+|||+++. ++.+|+|.+|++|++++.+++++++.+.
T Consensus 159 MDEPFgALDpI~R~~l-Q~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 159 MDEPFGALDPITRKQL-QEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred ecCCccccChhhHHHH-HHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 9999999999998887 44454433 38999999999987 6789999999999999999999998653
No 378
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=100.00 E-value=2.8e-34 Score=329.93 Aligned_cols=189 Identities=26% Similarity=0.391 Sum_probs=156.6
Q ss_pred EEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCC-chhhhcccCC---CCChHHHH
Q 000845 1036 VVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSG-SVRYNLDPLS---QFTDQEIW 1111 (1255)
Q Consensus 1036 IvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~g-TIr~Nl~~~~---~~sd~ei~ 1111 (1255)
|+||||||||||+++|.|+++|++|+|.+||.++...+. .+++++|+||++.+|+. |+++|+.+.. ..+.++..
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~p~~G~I~i~g~~i~~~~~--~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~ 78 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQPDSGSIMLDGEDVTNVPP--HLRHINMVFQSYALFPHMTVEENVAFGLKMRKVPRAEIK 78 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCEEEEecCccccCCCcHHHHHHHHHhhcCCCHHHHH
Confidence 689999999999999999999999999999999987664 46789999999999976 9999997431 12222221
Q ss_pred hccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHH
Q 000845 1112 EVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRR 1191 (1255)
Q Consensus 1112 ~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~ 1191 (1255)
+ ...++++..++.++.++ ...+||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++
T Consensus 79 ~--~~~~~l~~~~l~~~~~~-----------~~~~LSgGq~qRvalaraL~~~p~lllLDEP~s~LD~~~~~~l~~~l~~ 145 (325)
T TIGR01187 79 P--RVLEALRLVQLEEFADR-----------KPHQLSGGQQQRVALARALVFKPKILLLDEPLSALDKKLRDQMQLELKT 145 (325)
T ss_pred H--HHHHHHHHcCCcchhcC-----------ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHH
Confidence 1 00125666655444332 3357999999999999999999999999999999999999999999988
Q ss_pred HcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcCChHH
Q 000845 1192 EFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQDSLF 1239 (1255)
Q Consensus 1192 ~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~~~f 1239 (1255)
..+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+++++.+++...|
T Consensus 146 l~~~~g~tiiivTHd~~e~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~ 196 (325)
T TIGR01187 146 IQEQLGITFVFVTHDQEEAMTMSDRIAIMRKGKIAQIGTPEEIYEEPANLF 196 (325)
T ss_pred HHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCcHH
Confidence 653 7899999999999876 99999999999999999999998765544
No 379
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=100.00 E-value=1.4e-33 Score=284.90 Aligned_cols=143 Identities=29% Similarity=0.504 Sum_probs=134.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
++++|++++|.. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||. ..++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~~~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 67 (144)
T cd03221 1 IELENLSKTYGG--KLLLKDISLTINPGDRIGLVGRNGAGKSTLLKLIAGELEPDEGIVTWGST-----------VKIGY 67 (144)
T ss_pred CEEEEEEEEECC--ceEEEeeEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCe-----------EEEEE
Confidence 478999999964 35999999999999999999999999999999999999999999999994 47899
Q ss_pred EccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHcc
Q 000845 1084 IPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLR 1163 (1255)
Q Consensus 1084 vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~ 1163 (1255)
+|| ||+||+||++||||+++
T Consensus 68 ~~~------------------------------------------------------------lS~G~~~rv~laral~~ 87 (144)
T cd03221 68 FEQ------------------------------------------------------------LSGGEKMRLALAKLLLE 87 (144)
T ss_pred Ecc------------------------------------------------------------CCHHHHHHHHHHHHHhc
Confidence 988 99999999999999999
Q ss_pred CCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCE
Q 000845 1164 RRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGK 1221 (1255)
Q Consensus 1164 ~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1221 (1255)
+|+++||||||++||+.+...+.+.+++. ++|+|++||+++.+.. ||++++|++|+
T Consensus 88 ~p~illlDEP~~~LD~~~~~~l~~~l~~~--~~til~~th~~~~~~~~~d~v~~l~~g~ 144 (144)
T cd03221 88 NPNLLLLDEPTNHLDLESIEALEEALKEY--PGTVILVSHDRYFLDQVATKIIELEDGK 144 (144)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999876 5799999999999976 89999999986
No 380
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.7e-33 Score=348.13 Aligned_cols=209 Identities=22% Similarity=0.335 Sum_probs=169.4
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
-|+++|++++|++ .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.+|+
T Consensus 4 ~i~~~nls~~~~~-~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i~ 71 (552)
T TIGR03719 4 IYTMNRVSKVVPP-KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKVG 71 (552)
T ss_pred EEEEeeEEEecCC-CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEEE
Confidence 4899999999962 34699999999999999999999999999999999999999999999975 25799
Q ss_pred EEccCCccCCC-chhhhcccCC-C-----------------CCh---------HHHHhccCchhHHHhccHHHH------
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLS-Q-----------------FTD---------QEIWEVTIPSQVLEKCQLREV------ 1128 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~-~-----------------~sd---------~ei~~~~~~~~al~~~~l~~~------ 1128 (1255)
||||+|.+|+. |+++|+...- . ..+ +++.+ +++.++.++.
T Consensus 72 ~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 145 (552)
T TIGR03719 72 YLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQE------IIDAADAWDLDRKLEI 145 (552)
T ss_pred EEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHH------HHHhcCcchhHHHHHH
Confidence 99999998865 9999996411 0 001 11222 4555554322
Q ss_pred -HHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchh
Q 000845 1129 -IQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIAT 1207 (1255)
Q Consensus 1129 -i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~t 1207 (1255)
+..+ |++. ......+||||||||++||||++.+|++|||||||++||+++.+.+.+.|++. ++|||+|||+++.
T Consensus 146 ~l~~~--~l~~-~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~ 220 (552)
T TIGR03719 146 AMDAL--RCPP-WDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYF 220 (552)
T ss_pred HHhhC--CCCc-ccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHH
Confidence 2221 3321 23345689999999999999999999999999999999999999999999875 4699999999999
Q ss_pred hhh-cCEEEEEeCCEEE-EEcChhHHhhc
Q 000845 1208 VMD-CNMVLSMSDGKLV-EYDEPKKLLRR 1234 (1255)
Q Consensus 1208 i~~-~DrI~vl~~G~iv-e~G~~~eLl~~ 1234 (1255)
+.. ||+|++|++|+++ ..|++++.++.
T Consensus 221 ~~~~~d~v~~l~~g~i~~~~g~~~~~~~~ 249 (552)
T TIGR03719 221 LDNVAGWILELDRGRGIPWEGNYSSWLEQ 249 (552)
T ss_pred HHhhcCeEEEEECCEEEEecCCHHHHHHH
Confidence 987 8999999999976 67998876653
No 381
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=100.00 E-value=9.9e-34 Score=312.16 Aligned_cols=192 Identities=24% Similarity=0.326 Sum_probs=155.2
Q ss_pred EEeCCCCCceeeeeeEEEe-----CCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEc
Q 000845 1011 IRYRPNAPLVLRGITCTFE-----GGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIP 1085 (1255)
Q Consensus 1011 ~~Y~~~~~~vL~~is~~I~-----~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vp 1085 (1255)
|+|++.. ..++|++|+++ +||++||+|+||||||||+++|.|+++|++|+|.++|. +|+|+|
T Consensus 1 ~~y~~~~-~~~~~~~l~~~~~~i~~Ge~~~i~G~NGsGKSTLlk~L~G~~~p~~G~i~~~g~------------~i~~~~ 67 (246)
T cd03237 1 YTYPTMK-KTLGEFTLEVEGGSISESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDIEIELD------------TVSYKP 67 (246)
T ss_pred CCCcccc-cccCcEEEEEecCCcCCCCEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCc------------eEEEec
Confidence 4575433 47888888887 69999999999999999999999999999999999984 689999
Q ss_pred cCCc-cCCCchhhhcccCCC-C-C-hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHH
Q 000845 1086 QDPT-LFSGSVRYNLDPLSQ-F-T-DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVV 1161 (1255)
Q Consensus 1086 Qdp~-Lf~gTIr~Nl~~~~~-~-s-d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAl 1161 (1255)
|++. .+.+|+++|+..... . . .+...+ +++..++.+.. ......||||||||++|||||
T Consensus 68 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~------~l~~l~l~~~~-----------~~~~~~LSgGe~qrv~iaraL 130 (246)
T cd03237 68 QYIKADYEGTVRDLLSSITKDFYTHPYFKTE------IAKPLQIEQIL-----------DREVPELSGGELQRVAIAACL 130 (246)
T ss_pred ccccCCCCCCHHHHHHHHhhhccccHHHHHH------HHHHcCCHHHh-----------hCChhhCCHHHHHHHHHHHHH
Confidence 9997 468899999963211 1 1 111222 55555554332 233457999999999999999
Q ss_pred ccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEE--EEcChhHHh
Q 000845 1162 LRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLV--EYDEPKKLL 1232 (1255)
Q Consensus 1162 L~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~iv--e~G~~~eLl 1232 (1255)
+++|+++||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|+++..+ ..++|.++.
T Consensus 131 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsHd~~~~~~~~d~i~~l~~~~~~~~~~~~~~~~~ 206 (246)
T cd03237 131 SKDADIYLLDEPSAYLDVEQRLMASKVIRRFAENNEKTAFVVEHDIIMIDYLADRLIVFEGEPSVNGVANPPQSLR 206 (246)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEcCCCeeEEEeCCchHHH
Confidence 99999999999999999999999999999865 37899999999999986 9999999875444 567777765
No 382
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2e-33 Score=347.48 Aligned_cols=215 Identities=21% Similarity=0.303 Sum_probs=166.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
-|+++|++++|+. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++ +.+|+
T Consensus 6 ~l~i~~l~~~y~~-~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----------~~~i~ 73 (556)
T PRK11819 6 IYTMNRVSKVVPP-KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----------GIKVG 73 (556)
T ss_pred EEEEeeEEEEeCC-CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEEE
Confidence 5899999999962 25699999999999999999999999999999999999999999999975 24799
Q ss_pred EEccCCccCCC-chhhhcccCC-CC----------------ChHHHHh----ccCchhHHHhcc-------HHHHHHhhh
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLS-QF----------------TDQEIWE----VTIPSQVLEKCQ-------LREVIQEKK 1133 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~-~~----------------sd~ei~~----~~~~~~al~~~~-------l~~~i~~lp 1133 (1255)
||||+|.+++. |+++|+.... .+ .++++.. .....+.++.++ +.+.+..+
T Consensus 74 ~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 152 (556)
T PRK11819 74 YLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL- 152 (556)
T ss_pred EEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC-
Confidence 99999999876 9999986321 00 0000000 000000111111 11122221
Q ss_pred cCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cC
Q 000845 1134 EGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CN 1212 (1255)
Q Consensus 1134 ~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~D 1212 (1255)
|++ .......+||||||||++||||++.+|++|||||||++||+++.+.+.+.|++. +.|||+|||+++.+.. ||
T Consensus 153 -gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~--~~tviiisHd~~~~~~~~d 228 (556)
T PRK11819 153 -RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDY--PGTVVAVTHDRYFLDNVAG 228 (556)
T ss_pred -CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcC
Confidence 332 123344579999999999999999999999999999999999999999999875 3599999999999986 89
Q ss_pred EEEEEeCCEEE-EEcChhHHhhc
Q 000845 1213 MVLSMSDGKLV-EYDEPKKLLRR 1234 (1255)
Q Consensus 1213 rI~vl~~G~iv-e~G~~~eLl~~ 1234 (1255)
+|++|++|+++ ..|++++.++.
T Consensus 229 ~i~~l~~g~i~~~~g~~~~~~~~ 251 (556)
T PRK11819 229 WILELDRGRGIPWEGNYSSWLEQ 251 (556)
T ss_pred eEEEEeCCEEEEecCCHHHHHHH
Confidence 99999999987 77888876543
No 383
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.3e-33 Score=315.13 Aligned_cols=175 Identities=27% Similarity=0.411 Sum_probs=155.4
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC---------------------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG--------------------- 502 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G--------------------- 502 (1255)
.|+++|++++|+... .++|+|+||+|++||+++|+|++|||||||+++|.|+++ .+|
T Consensus 2 ~i~~~nls~~~~~~~-~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTEGG-NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCCCC-CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 588999999997433 479999999999999999999999999999999999997 667
Q ss_pred ---------------------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCE
Q 000845 503 ---------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDI 543 (1255)
Q Consensus 503 ---------------------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~i 543 (1255)
..+..+|.+++|.++++|.+||||||||++||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 11345688889999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHHHHHHHH
Q 000845 544 YLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEFQDLVNA 621 (1255)
Q Consensus 544 lLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~~~l~~~ 621 (1255)
+||||||++||+.+.+.+ ++.+....+++|+|+|||+++.+..||+|++|++|++++.|+++++......+.+++..
T Consensus 160 lllDEpts~LD~~~~~~l-~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 236 (275)
T cd03289 160 LLLDEPSAHLDPITYQVI-RKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISP 236 (275)
T ss_pred EEEECccccCCHHHHHHH-HHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhh
Confidence 999999999999998655 56666555689999999999998889999999999999999999998876777777654
No 384
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=2.4e-32 Score=356.66 Aligned_cols=93 Identities=16% Similarity=0.213 Sum_probs=82.9
Q ss_pred CCCCCCChhHHHHHHHHHHHccC--CCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEEE-
Q 000845 1142 QDGANWSMGQRQLIGLGRVVLRR--RQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLSM- 1217 (1255)
Q Consensus 1142 e~G~~LSgGQrQrl~lARAlL~~--~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl- 1217 (1255)
.....|||||-||+-||+.|=.+ -=++||||||.+|-+.--..+.++|+++. .|.|||+|-|+.++|+.||.|+-|
T Consensus 1383 R~~~TLSGGE~QRirLa~~lgs~L~gvlYVLDEPSiGLHp~D~~~Li~~L~~Lrd~GNTvivVEHd~~~i~~AD~iidiG 1462 (1809)
T PRK00635 1383 QEQDTLSDGEHYRLHLAKKISSNLTDIIYLLEDPLSGLHPQDAPTLLQLIKELVTNNNTVIATDRSGSLAEHADHLIHLG 1462 (1809)
T ss_pred CCCCCCcchHHHHHHHHHHhcCCCceeEEEeCCCCcCCChhHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEeC
Confidence 45678999999999999999765 34789999999999988888888888876 589999999999999999999999
Q ss_pred -----eCCEEEEEcChhHHhhc
Q 000845 1218 -----SDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1218 -----~~G~ive~G~~~eLl~~ 1234 (1255)
..|+|+.+|+|++++.+
T Consensus 1463 PgAG~~GG~iv~~G~~~~l~~~ 1484 (1809)
T PRK00635 1463 PGSGPQGGYLLSTSALKQSQPD 1484 (1809)
T ss_pred CCccCCCCEEEecCCHHHHhhh
Confidence 46999999999999754
No 385
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-34 Score=281.73 Aligned_cols=221 Identities=24% Similarity=0.404 Sum_probs=189.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++||+.+|. ...|++|+|++|++|...+|+||||+|||||+..+.|+.+.++|+|.|||.++.+.+.++|-+++++
T Consensus 2 I~i~nv~K~y~--~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~lSI 79 (252)
T COG4604 2 ITIENVSKSYG--TKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKKLSI 79 (252)
T ss_pred eeehhhhHhhC--CEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHHHHH
Confidence 68899999995 4579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCccCC-CchhhhcccCC------CCC--hHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHH
Q 000845 1084 IPQDPTLFS-GSVRYNLDPLS------QFT--DQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQL 1154 (1255)
Q Consensus 1084 vpQdp~Lf~-gTIr~Nl~~~~------~~s--d~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1154 (1255)
+-|+.++-. -|||+=+.++. ..+ |.++.+ +|++-.+|.+.-.+. | ..||||||||
T Consensus 80 LkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~-----~aieyl~L~~l~dry---L--------d~LSGGQrQR 143 (252)
T COG4604 80 LKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIIN-----EAIEYLHLEDLSDRY---L--------DELSGGQRQR 143 (252)
T ss_pred HHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHH-----HHHHHhcccchHHHh---H--------Hhcccchhhh
Confidence 999998754 49998876432 122 334443 377777665543322 1 2599999999
Q ss_pred HHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHH
Q 000845 1155 IGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKL 1231 (1255)
Q Consensus 1155 l~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1231 (1255)
--+|-.+.++.+-++||||-++||......+++.+++... ++|+++|-|+.+.... +|.|+-|.+|+++.+|+|+|.
T Consensus 144 AfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~ei 223 (252)
T COG4604 144 AFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVVKQGSPDEI 223 (252)
T ss_pred hhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEEecCCHHHh
Confidence 9999999999999999999999999999999999988653 7999999999999876 799999999999999999999
Q ss_pred hhcCChHHHHHHH
Q 000845 1232 LRRQDSLFAQLVK 1244 (1255)
Q Consensus 1232 l~~~~~~f~~l~~ 1244 (1255)
++. ....+++.
T Consensus 224 i~~--~~L~eiyd 234 (252)
T COG4604 224 IQP--EILSEIYD 234 (252)
T ss_pred cCH--HHHHHHhc
Confidence 974 45555554
No 386
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-33 Score=279.14 Aligned_cols=208 Identities=25% Similarity=0.345 Sum_probs=170.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
+..++++.+|+....++|+|+|++|.+||.|.++||||||||||++++.|+.+|..|+|.+||..|+--+-+ =++
T Consensus 4 l~~~~~sl~y~g~~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgae-----rgv 78 (259)
T COG4525 4 LNVSHLSLSYEGKPRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAE-----RGV 78 (259)
T ss_pred eehhheEEecCCcchhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCcc-----cee
Confidence 566789999975545699999999999999999999999999999999999999999999999998765433 499
Q ss_pred EccCCccCCC-chhhhcccCCC---CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHH
Q 000845 1084 IPQDPTLFSG-SVRYNLDPLSQ---FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGR 1159 (1255)
Q Consensus 1084 vpQdp~Lf~g-TIr~Nl~~~~~---~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lAR 1159 (1255)
|+|++-|++= |+.+|+.+.-+ ...++-.+ ...+.+..+||.++-.+. --+||||||||+.|||
T Consensus 79 VFQ~~~LlPWl~~~dNvafgL~l~Gi~k~~R~~--~a~q~l~~VgL~~~~~~~-----------i~qLSGGmrQRvGiAR 145 (259)
T COG4525 79 VFQNEALLPWLNVIDNVAFGLQLRGIEKAQRRE--IAHQMLALVGLEGAEHKY-----------IWQLSGGMRQRVGIAR 145 (259)
T ss_pred EeccCccchhhHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHhCcccccccc-----------eEeecchHHHHHHHHH
Confidence 9999999984 99999875321 22221111 012356677766553222 2369999999999999
Q ss_pred HHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEe--CCEEEEEcChh
Q 000845 1160 VVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMS--DGKLVEYDEPK 1229 (1255)
Q Consensus 1160 AlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~--~G~ive~G~~~ 1229 (1255)
||.-+|+.|+||||.++||.-|.+.+|+.|-+.. .++.+++|||+++...- ++|++||+ .|||++.=+++
T Consensus 146 ALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 146 ALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhheeEEecCCCceeeEecCCC
Confidence 9999999999999999999999999999998765 47899999999998765 99999997 49999875543
No 387
>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=100.00 E-value=6.5e-34 Score=314.66 Aligned_cols=202 Identities=22% Similarity=0.279 Sum_probs=157.9
Q ss_pred EEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEE-----------EcCEeCCCCChH
Q 000845 1007 YDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKII-----------IDGLDITTIGLY 1075 (1255)
Q Consensus 1007 ~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~-----------idG~di~~i~~~ 1075 (1255)
.||+++|++. .++|+|+|+ +++||++||+|+||||||||+++|.|+++|++|+|. +||.++.+....
T Consensus 4 ~~~~~~y~~~-~~~l~~i~~-i~~Ge~~~IvG~nGsGKSTLlk~l~Gl~~p~~G~I~~~~~~~~~~~~~~g~~~~~~~~~ 81 (255)
T cd03236 4 DEPVHRYGPN-SFKLHRLPV-PREGQVLGLVGPNGIGKSTALKILAGKLKPNLGKFDDPPDWDEILDEFRGSELQNYFTK 81 (255)
T ss_pred cCcceeecCc-chhhhcCCC-CCCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEeeccccchhhhhccCchhhhhhHH
Confidence 4789999643 359999995 999999999999999999999999999999999996 889988766433
Q ss_pred Hhhc--ccEEEccCCccCC----CchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCCh
Q 000845 1076 DLRS--NLGIIPQDPTLFS----GSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSM 1149 (1255)
Q Consensus 1076 ~lR~--~i~~vpQdp~Lf~----gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1149 (1255)
..|. .+++++|++.+++ +++++|+... ..++++.+ +++..++.+ .......+||+
T Consensus 82 ~~~~~~~i~~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~~~~------~l~~~gl~~-----------~~~~~~~~LS~ 142 (255)
T cd03236 82 LLEGDVKVIVKPQYVDLIPKAVKGKVGELLKKK--DERGKLDE------LVDQLELRH-----------VLDRNIDQLSG 142 (255)
T ss_pred hhhcccceeeecchhccCchHHHHHHHHHhchh--HHHHHHHH------HHHHcCCch-----------hhcCChhhCCH
Confidence 3333 3678888766555 5566654311 11222333 566655543 33344568999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeccCchhhhh-cCEEEEEeCCEEEE---
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA-NCTVITVAHRIATVMD-CNMVLSMSDGKLVE--- 1224 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive--- 1224 (1255)
|||||++||||++++|++++|||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|+ |++++
T Consensus 143 G~~qrv~laral~~~p~illlDEPts~LD~~~~~~l~~~l~~l~~~~~tIIiiSHd~~~~~~~ad~i~~l~-~~~~~~~~ 221 (255)
T cd03236 143 GELQRVAIAAALARDADFYFFDEPSSYLDIKQRLNAARLIRELAEDDNYVLVVEHDLAVLDYLSDYIHCLY-GEPGAYGV 221 (255)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEC-CCCCccee
Confidence 999999999999999999999999999999999999999987653 7999999999999986 99999995 66665
Q ss_pred EcChhH
Q 000845 1225 YDEPKK 1230 (1255)
Q Consensus 1225 ~G~~~e 1230 (1255)
.|.|..
T Consensus 222 ~~~~~~ 227 (255)
T cd03236 222 VTLPKS 227 (255)
T ss_pred eecCcc
Confidence 344544
No 388
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.6e-33 Score=314.54 Aligned_cols=216 Identities=23% Similarity=0.362 Sum_probs=175.4
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh-HHhhccc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL-YDLRSNL 1081 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~-~~lR~~i 1081 (1255)
.+++++++.+|+ .-.+++||||+|++||.-|++|.||+|||||++.|+|+|+|++|+|++||++++--++ +.+|..|
T Consensus 4 ~l~~~~itK~f~--~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~GI 81 (501)
T COG3845 4 ALEMRGITKRFP--GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLGI 81 (501)
T ss_pred eEEEeccEEEcC--CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcCC
Confidence 589999999997 3569999999999999999999999999999999999999999999999999875555 4588899
Q ss_pred EEEccCCccCCC-chhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHH
Q 000845 1082 GIIPQDPTLFSG-SVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRV 1160 (1255)
Q Consensus 1082 ~~vpQdp~Lf~g-TIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARA 1160 (1255)
|+|.|++.|++. |+.|||....+.+---..+ ..++- ..+.+..++ -|++-...+.-..||.|||||+-|-+|
T Consensus 82 GMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~---~~~~~--~~i~~l~~~--yGl~vdp~~~V~dLsVG~qQRVEIlKa 154 (501)
T COG3845 82 GMVHQHFMLVPTLTVAENIILGLEPSKGGLID---RRQAR--ARIKELSER--YGLPVDPDAKVADLSVGEQQRVEILKA 154 (501)
T ss_pred cEEeeccccccccchhhhhhhcCccccccccC---HHHHH--HHHHHHHHH--hCCCCCccceeecCCcchhHHHHHHHH
Confidence 999999999987 9999997654322000000 00011 112222222 233333333445699999999999999
Q ss_pred HccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcC
Q 000845 1161 VLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1161 lL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1227 (1255)
|+|+|+|||||||||-|-|..-+.+.+.+++.. .|+|||+|||+++.++. |||+-||.+|+++....
T Consensus 155 Lyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~ 223 (501)
T COG3845 155 LYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVD 223 (501)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeec
Confidence 999999999999999999999999888988765 58999999999999987 99999999999987665
No 389
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-33 Score=294.63 Aligned_cols=154 Identities=40% Similarity=0.505 Sum_probs=125.9
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc-------------c------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM-------------D------ 504 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~-------------D------ 504 (1255)
.+.+++++.+|.. ..+|+|+||+|++||+++|+|||||||||||++|.|..+|++|. |
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ 79 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQ 79 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEec
Confidence 4788999999976 47999999999999999999999999999999999999999981 1
Q ss_pred -cCCCCCC-------------C-------------ccccc------cCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCC
Q 000845 505 -LKMLPFG-------------D-------------LTQIG------ERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFS 551 (1255)
Q Consensus 505 -i~~lp~g-------------d-------------~T~iG------e~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~S 551 (1255)
-..||.. . ...|| .....||||||||||||||+..+|+|+||||||+
T Consensus 80 ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFg 159 (248)
T COG1116 80 EDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEPFG 159 (248)
T ss_pred cCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 1122210 0 01122 2357899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCc-cccCCEEEEEeC--CEEE
Q 000845 552 ALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDF-LPAFDSILLISG--GEII 600 (1255)
Q Consensus 552 aLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~-l~~aD~Iivl~~--G~i~ 600 (1255)
|||+.|+.++-+.+.+-+. .++|+++|||+++. +--+|+|++|.+ |+|.
T Consensus 160 ALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 160 ALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred hhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 9999998887665554443 47999999999987 456899999988 5553
No 390
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional
Probab=100.00 E-value=3.1e-33 Score=302.39 Aligned_cols=185 Identities=19% Similarity=0.269 Sum_probs=151.6
Q ss_pred eeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEE-EcCEeCCCCChHHhhcccEEEccCCccCCC-chhh
Q 000845 1020 VLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKII-IDGLDITTIGLYDLRSNLGIIPQDPTLFSG-SVRY 1097 (1255)
Q Consensus 1020 vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~-idG~di~~i~~~~lR~~i~~vpQdp~Lf~g-TIr~ 1097 (1255)
||+|+||+|++||++||+||||||||||+++|+|+++|++|+|. ++|.++ .+.|++.+|++ |+++
T Consensus 2 vl~~vs~~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~sG~i~~~~~~~~-------------~~~~~~~l~~~ltv~e 68 (213)
T PRK15177 2 VLDKTDFVMGYHEHIGILAAPGSGKTTLTRLLCGLDAPDEGDFIGLRGDAL-------------PLGANSFILPGLTGEE 68 (213)
T ss_pred eeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCccCCCCCEEEecCcee-------------ccccccccCCcCcHHH
Confidence 79999999999999999999999999999999999999999997 777543 13467788876 9999
Q ss_pred hcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCC
Q 000845 1098 NLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEAT 1174 (1255)
Q Consensus 1098 Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~T 1174 (1255)
|+.... ..+.++..+ .+.+..+ ++..+++.+ ..||+|||||++||||++++|+++||||||
T Consensus 69 nl~~~~~~~~~~~~~~~~-----~~~~~~~-------l~~~~~~~~----~~lS~G~~qrv~la~al~~~p~llllDEP~ 132 (213)
T PRK15177 69 NARMMASLYGLDGDEFSH-----FCYQLTQ-------LEQCYTDRV----SEYSVTMKTHLAFAINLLLPCRLYIADGKL 132 (213)
T ss_pred HHHHHHHHcCCCHHHHHH-----HHHHHhC-------hhHHhhchH----hhcCHHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 997432 223333322 0222222 333445555 359999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhh
Q 000845 1175 ASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLR 1233 (1255)
Q Consensus 1175 S~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~ 1233 (1255)
+++|+.+.+.+.+.+.+..+++|+|++||+++.+.. ||+|++|++|++++.|+-+++.+
T Consensus 133 ~~lD~~~~~~~~~~l~~~~~~~~ii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 192 (213)
T PRK15177 133 YTGDNATQLRMQAALACQLQQKGLIVLTHNPRLIKEHCHAFGVLLHGKITMCEDLAQATA 192 (213)
T ss_pred ccCCHHHHHHHHHHHHHHhhCCcEEEEECCHHHHHHhcCeeEEEECCeEEEeCCHHHHHH
Confidence 999999999999988765667899999999999975 99999999999999999888754
No 391
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.7e-33 Score=301.79 Aligned_cols=163 Identities=29% Similarity=0.451 Sum_probs=136.2
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCC----------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKM---------- 507 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~---------- 507 (1255)
.++++|++|+|+. +++|+|+||++++|++++|+|||||||||||++|.|.++|.+| .|+..
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 3688999999983 5899999999999999999999999999999999999999998 12211
Q ss_pred --CCCC------------------------------Ccccc-------------ccCCCcCChHHHHHHHHHHHHccCCC
Q 000845 508 --LPFG------------------------------DLTQI-------------GERGVNLSGGQKQRIQLARALYQDRD 542 (1255)
Q Consensus 508 --lp~g------------------------------d~T~i-------------Ge~G~~LSGGQkqRIaLARAly~~~~ 542 (1255)
+|+. |...| ...-..|||||||||.|||||.++|+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~LSGGerQrv~iArALaQ~~~ 158 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDELSGGERQRVLIARALAQETP 158 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccccChhHHHHHHHHHHHhcCCC
Confidence 1111 11111 12346799999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHhhh--cCCcEEEEEccCCCc-cccCCEEEEEeCCEEEEecChhHHhh
Q 000845 543 IYLLDDPFSALDAKTAKFLFTEYVMGA--LSKKTVLLVTHQVDF-LPAFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 543 ilLLDdp~SaLD~~~~~~i~~~~i~~~--l~~kTvIlvTH~l~~-l~~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
|+|||||||+||....-.+.+- ++.+ .+|+|+|+|+|++++ +.+||++++|++|+++.+|+++|.+.
T Consensus 159 iLLLDEPTs~LDi~~Q~evl~l-l~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 159 ILLLDEPTSHLDIAHQIEVLEL-LRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred EEEeCCCccccCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999998888754 4443 358999999999987 57899999999999999999998764
No 392
>COG4167 SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.2e-33 Score=273.05 Aligned_cols=213 Identities=26% Similarity=0.368 Sum_probs=174.6
Q ss_pred CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCc--------
Q 000845 1018 PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPT-------- 1089 (1255)
Q Consensus 1018 ~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~-------- 1089 (1255)
..+.+.|||+++.|+.+||+|.||||||||++.|.|+++|++|+|.+||.++.-=+...--++|-+|+|||.
T Consensus 26 ~~AV~~vSFtL~~~QTlaiIG~NGSGKSTLakMlaGmi~PTsG~il~n~~~L~~~Dy~~R~k~IRMiFQDpnts~NPRl~ 105 (267)
T COG4167 26 VEAVKPVSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGEILINDHPLHFGDYSFRSKRIRMIFQDPNTSLNPRLR 105 (267)
T ss_pred hhcccceEEEecCCcEEEEEccCCCcHhHHHHHHhcccCCCCceEEECCccccccchHhhhhheeeeecCCccccChhhh
Confidence 358999999999999999999999999999999999999999999999999877666666678999999995
Q ss_pred ---cCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCC
Q 000845 1090 ---LFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQ 1166 (1255)
Q Consensus 1090 ---Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ 1166 (1255)
++++.+|-|-+.-.+...+.|.+ .|+.+||. |+--+. ....||.|||||+||||||+-+|+
T Consensus 106 iGqiLd~PL~l~T~~~~~~R~~~i~~------TL~~VGL~------Pdhan~----~~~~la~~QKQRVaLARALIL~P~ 169 (267)
T COG4167 106 IGQILDFPLRLNTDLEPEQRRKQIFE------TLRMVGLL------PDHANY----YPHMLAPGQKQRVALARALILRPK 169 (267)
T ss_pred hhhHhcchhhhcccCChHHHHHHHHH------HHHHhccC------cccccc----chhhcCchhHHHHHHHHHHhcCCc
Confidence 33444444444333344556666 78888874 321111 124699999999999999999999
Q ss_pred eEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcCC-hHHHHH
Q 000845 1167 ILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQD-SLFAQL 1242 (1255)
Q Consensus 1167 ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~-~~f~~l 1242 (1255)
|+|-|||-.+||......+.+..-+.. .|-.-|.|+.++-.|++ +|.|+||++|+++|.|++.++++.|. ..-++|
T Consensus 170 iIIaDeAl~~LD~smrsQl~NL~LeLQek~GiSyiYV~QhlG~iKHi~D~viVM~EG~vvE~G~t~~v~a~P~~~~TkRl 249 (267)
T COG4167 170 IIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMIKHISDQVLVMHEGEVVERGSTADVLASPLHELTKRL 249 (267)
T ss_pred EEEehhhhhhccHHHHHHHHHHHHHHHHHhCceEEEEechhhHhhhhcccEEEEecCceeecCChhhhhcCCccHHHHHH
Confidence 999999999999999988877765432 47789999999999998 89999999999999999999999864 355666
Q ss_pred HHHH
Q 000845 1243 VKEY 1246 (1255)
Q Consensus 1243 ~~~~ 1246 (1255)
++.+
T Consensus 250 ieSh 253 (267)
T COG4167 250 IESH 253 (267)
T ss_pred HHHH
Confidence 6654
No 393
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-33 Score=299.42 Aligned_cols=166 Identities=30% Similarity=0.419 Sum_probs=138.9
Q ss_pred EEEEeeEEEecCC--CCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCCCCCCc---
Q 000845 445 IFIKSADLSWEAD--LLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKMLPFGDL--- 513 (1255)
Q Consensus 445 i~~~~~~f~w~~~--~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~lp~gd~--- 513 (1255)
|++++++..|... +..++|+|+||+|++||+.+|+|.+|+|||||+++|.+.-.|++| .|+..++....
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999863 234689999999999999999999999999999999999999998 23322221111
Q ss_pred ---------------------------------------------------cccccCCCcCChHHHHHHHHHHHHccCCC
Q 000845 514 ---------------------------------------------------TQIGERGVNLSGGQKQRIQLARALYQDRD 542 (1255)
Q Consensus 514 ---------------------------------------------------T~iGe~G~~LSGGQkqRIaLARAly~~~~ 542 (1255)
-.-+....+|||||||||+|||||..+|+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARALa~~P~ 161 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYPAQLSGGQKQRVAIARALANNPK 161 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHHhcCCC
Confidence 01134568999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHhhh--cCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhhc
Q 000845 543 IYLLDDPFSALDAKTAKFLFTEYVMGA--LSKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 543 ilLLDdp~SaLD~~~~~~i~~~~i~~~--l~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
|+|.|||||||||+|.+.|.+- +..+ ..|-|+++|||.++.++ -||++.||++|+++++|+..++...
T Consensus 162 iLL~DEaTSALDP~TT~sIL~L-L~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~ 232 (339)
T COG1135 162 ILLCDEATSALDPETTQSILEL-LKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFAN 232 (339)
T ss_pred EEEecCccccCChHHHHHHHHH-HHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcC
Confidence 9999999999999999999754 4332 24899999999999997 5899999999999999999988654
No 394
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-33 Score=290.20 Aligned_cols=167 Identities=32% Similarity=0.533 Sum_probs=137.8
Q ss_pred eEEEEeeEEEecCCC-CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc---c---------------
Q 000845 444 SIFIKSADLSWEADL-LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM---D--------------- 504 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~-~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~---D--------------- 504 (1255)
.++++|.++.|+... ..++|+||||++.+||..+|+|++|||||||.++|+|..+|.+|. |
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 478999999998643 125999999999999999999999999999999999999999981 0
Q ss_pred -cCC----------------------C-CCCC----------ccccc-------cCCCcCChHHHHHHHHHHHHccCCCE
Q 000845 505 -LKM----------------------L-PFGD----------LTQIG-------ERGVNLSGGQKQRIQLARALYQDRDI 543 (1255)
Q Consensus 505 -i~~----------------------l-p~gd----------~T~iG-------e~G~~LSGGQkqRIaLARAly~~~~i 543 (1255)
+.. + ++|. .+.|| .....|||||||||||||||..+|++
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~Pkl 162 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPKL 162 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCCE
Confidence 000 0 0010 01122 35788999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChhHHhhc
Q 000845 544 YLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLPA-FDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 544 lLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~~-aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
+||||||||||+.+...|++ ++..+. ++-|.|+|||++..+.+ ||+|+||++|++++.++-+++...
T Consensus 163 LIlDEptSaLD~siQa~Iln-lL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 163 LILDEPTSALDVSVQAQILN-LLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred EEecCchhhhcHHHHHHHHH-HHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 99999999999999999984 554444 36699999999999875 799999999999999999888754
No 395
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.7e-33 Score=284.92 Aligned_cols=168 Identities=36% Similarity=0.528 Sum_probs=142.4
Q ss_pred cceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCCCCCC---
Q 000845 442 EHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKMLPFGD--- 512 (1255)
Q Consensus 442 ~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~lp~gd--- 512 (1255)
+..|+++++++++.. +.+|+|+||+|++||+++|+||+||||||||++|+|.++|.+| .|+..++..+
T Consensus 6 ~~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 6 EPLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred cceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 567999999999964 4799999999999999999999999999999999999999998 2332222111
Q ss_pred -----------------cc-----------------------------ccccCC-------CcCChHHHHHHHHHHHHcc
Q 000845 513 -----------------LT-----------------------------QIGERG-------VNLSGGQKQRIQLARALYQ 539 (1255)
Q Consensus 513 -----------------~T-----------------------------~iGe~G-------~~LSGGQkqRIaLARAly~ 539 (1255)
.| .||-+| ..||||.|.|+|||||+..
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAial 162 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIAL 162 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhc
Confidence 11 244444 5899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhhcch
Q 000845 540 DRDIYLLDDPFSALDAKTAKFLFTEYVMGALS--KKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLVTSQ 613 (1255)
Q Consensus 540 ~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~--~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~~~~ 613 (1255)
||+|+++|||||+|||.++. .|.++|..+.+ +-|+|+|||+++.+. -||+|+++.||+|+..|+++|+.+.+.
T Consensus 163 dPell~~DEPtsGLDPI~a~-~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~sd~ 238 (263)
T COG1127 163 DPELLFLDEPTSGLDPISAG-VIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLASDD 238 (263)
T ss_pred CCCEEEecCCCCCCCcchHH-HHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhCCC
Confidence 99999999999999999975 66888866543 899999999999875 569999999999999999999986543
No 396
>COG1101 PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.2e-33 Score=280.60 Aligned_cols=204 Identities=27% Similarity=0.383 Sum_probs=170.9
Q ss_pred CCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCcc--C-
Q 000845 1015 PNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTL--F- 1091 (1255)
Q Consensus 1015 ~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~L--f- 1091 (1255)
+..+++|+++|++|+.||.|-|+|.||||||||++.+.|-+.|++|+|.|||+|+.+++.+.--..++-|+|||.. +
T Consensus 16 ~~ek~~l~~~sL~I~~g~FvtViGsNGAGKSTlln~iaG~l~~t~G~I~Idg~dVtk~~~~~RA~~larVfQdp~~gt~~ 95 (263)
T COG1101 16 PLEKRALNGLSLEIAEGDFVTVIGSNGAGKSTLLNAIAGDLKPTSGQILIDGVDVTKKSVAKRANLLARVFQDPLAGTAP 95 (263)
T ss_pred hhHHHHHhcCceeecCCceEEEEcCCCccHHHHHHHhhCccccCCceEEECceecccCCHHHHhhHHHHHhcchhhCCcc
Confidence 3456799999999999999999999999999999999999999999999999999999999988899999999963 4
Q ss_pred CCchhhhcccCCC------CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCC
Q 000845 1092 SGSVRYNLDPLSQ------FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRR 1165 (1255)
Q Consensus 1092 ~gTIr~Nl~~~~~------~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~ 1165 (1255)
+-||.||+..... .+.. +. .-.+....+.+..++.||.-.++..-.-|||||||-++|+-|.+++|
T Consensus 96 ~lTieENl~la~~Rg~~rgl~~~-ln-------~~~~~~f~~~l~~l~lgLenrL~~~iglLSGGQRQalsL~MAtl~~p 167 (263)
T COG1101 96 ELTIEENLALAESRGKKRGLSSA-LN-------ERRRSSFRERLARLGLGLENRLSDRIGLLSGGQRQALSLLMATLHPP 167 (263)
T ss_pred cccHHHHHHHHHhcCcccccchh-hh-------HHHHHHHHHHHhhcccchhhhhcChhhhccchHHHHHHHHHHhcCCC
Confidence 3499999963211 1110 00 11223345566777888877777777789999999999999999999
Q ss_pred CeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhhc-CEEEEEeCCEEEEEc
Q 000845 1166 QILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMDC-NMVLSMSDGKLVEYD 1226 (1255)
Q Consensus 1166 ~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~-DrI~vl~~G~ive~G 1226 (1255)
+||+|||=|++|||.+.+.|++.-.+.. .+-|.++|||.++...+| +|.++|++|+||-.-
T Consensus 168 kiLLLDEHTAALDPkta~~vm~lT~kiV~~~klTtlMVTHnm~~Al~yG~RlImLh~G~IvlDv 231 (263)
T COG1101 168 KILLLDEHTAALDPKTAEFVMELTAKIVEEHKLTTLMVTHNMEDALDYGNRLIMLHSGKIVLDV 231 (263)
T ss_pred cEEEecchhhcCCcchHHHHHHHHHHHHHhcCCceEEEeccHHHHHhhCCeEEEEeCCeEEEEc
Confidence 9999999999999999999887766543 346999999999998875 999999999999653
No 397
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-32 Score=286.35 Aligned_cols=208 Identities=24% Similarity=0.345 Sum_probs=173.9
Q ss_pred EEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCC----CCChHHhhcccEEE
Q 000845 1009 LQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDIT----TIGLYDLRSNLGII 1084 (1255)
Q Consensus 1009 vs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~----~i~~~~lR~~i~~v 1084 (1255)
++|+++-+. .+| +++|..+.--.+||-|+||||||||++++.|+..|++|.|.+||.-+. .+.+..-|++||||
T Consensus 4 ~~~~~~lG~-~~l-~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPdeG~I~lngr~L~Ds~k~i~lp~~~RriGYV 81 (352)
T COG4148 4 LNFRQRLGN-FAL-DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPDEGRIELNGRVLVDAEKGIFLPPEKRRIGYV 81 (352)
T ss_pred EehhhhcCc-eEE-EEeccCCCCceEEEecCCCCChhhHHHHHhccCCccccEEEECCEEeecccCCcccChhhheeeeE
Confidence 445554332 234 688998888899999999999999999999999999999999997553 44555568999999
Q ss_pred ccCCccCCC-chhhhcccCCCCCh-HHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHc
Q 000845 1085 PQDPTLFSG-SVRYNLDPLSQFTD-QEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVL 1162 (1255)
Q Consensus 1085 pQdp~Lf~g-TIr~Nl~~~~~~sd-~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL 1162 (1255)
+||.-||+- |+|.||.+....++ ++.-+ +....|+....+..| ..||||||||+||+||||
T Consensus 82 FQDARLFpH~tVrgNL~YG~~~~~~~~fd~------iv~lLGI~hLL~R~P-----------~~LSGGEkQRVAIGRALL 144 (352)
T COG4148 82 FQDARLFPHYTVRGNLRYGMWKSMRAQFDQ------LVALLGIEHLLDRYP-----------GTLSGGEKQRVAIGRALL 144 (352)
T ss_pred eeccccccceEEecchhhhhcccchHhHHH------HHHHhCcHHHHhhCC-----------CccCcchhhHHHHHHHHh
Confidence 999999976 99999997654442 33333 555666666666665 479999999999999999
Q ss_pred cCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhcC
Q 000845 1163 RRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRRQ 1235 (1255)
Q Consensus 1163 ~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~ 1235 (1255)
.+|++|+||||.|+||....++|.-.|++..+ +--++.|||.++.+.. +|+|++|++|+|...|.-+|.++++
T Consensus 145 t~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~IPIlYVSHS~~Ev~RLAd~vV~le~GkV~A~g~~e~v~~~~ 220 (352)
T COG4148 145 TAPELLLMDEPLASLDLPRKREILPYLERLRDEINIPILYVSHSLDEVLRLADRVVVLENGKVKASGPLEEVWGSP 220 (352)
T ss_pred cCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCCCEEEEecCHHHHHhhhheEEEecCCeEEecCcHHHHhcCc
Confidence 99999999999999999999999888887765 3579999999999977 9999999999999999999998764
No 398
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-33 Score=281.46 Aligned_cols=165 Identities=28% Similarity=0.425 Sum_probs=139.6
Q ss_pred cceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC-----------cccCC---
Q 000845 442 EHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG-----------MDLKM--- 507 (1255)
Q Consensus 442 ~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G-----------~Di~~--- 507 (1255)
...++++|.++.|.. +.+|+|||++|++++++|++||+||||||||+++.+..+...| .|+..
T Consensus 5 ~~~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~ 81 (253)
T COG1117 5 IPAIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKV 81 (253)
T ss_pred cceeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCC
Confidence 356889999999974 4799999999999999999999999999999999998887664 11110
Q ss_pred ------------------CC-------------CCCc----------------------cccccCCCcCChHHHHHHHHH
Q 000845 508 ------------------LP-------------FGDL----------------------TQIGERGVNLSGGQKQRIQLA 534 (1255)
Q Consensus 508 ------------------lp-------------~gd~----------------------T~iGe~G~~LSGGQkqRIaLA 534 (1255)
+| +|.. -.+.+.+..|||||+||+|||
T Consensus 82 d~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIA 161 (253)
T COG1117 82 DVVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIA 161 (253)
T ss_pred CHHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHH
Confidence 11 0100 113467889999999999999
Q ss_pred HHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChhHHhh
Q 000845 535 RALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPA-FDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 535 RAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~-aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
||+.-+|+|+|||||||||||.+..+| ++++..+.++-|+|+|||+++.... +|++..+-+|+++|.|+-+++..
T Consensus 162 RalAv~PeVlLmDEPtSALDPIsT~kI-EeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~ 237 (253)
T COG1117 162 RALAVKPEVLLMDEPTSALDPISTLKI-EELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFT 237 (253)
T ss_pred HHHhcCCcEEEecCcccccCchhHHHH-HHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhc
Confidence 999999999999999999999998888 8888888888999999999998765 59999999999999999888764
No 399
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.5e-32 Score=296.63 Aligned_cols=230 Identities=20% Similarity=0.351 Sum_probs=186.4
Q ss_pred eEEEEEEEEEeC--CCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CCCEEEEcCEeCCCCChH
Q 000845 1003 KVEIYDLQIRYR--PNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEP-----TGGKIIIDGLDITTIGLY 1075 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~--~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~-----~~G~I~idG~di~~i~~~ 1075 (1255)
-++++|++++|. .+...++++|||+|++||.+|+||.||||||-..+.++|+++. -+|+|.+||.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 478999999885 3345699999999999999999999999999999999999874 479999999999999988
Q ss_pred Hhhc----ccEEEccCCcc-CC--Cchhhhc----ccCCC----CChHHHHhccCchhHHHhccHHHHHHhhhcCccchh
Q 000845 1076 DLRS----NLGIIPQDPTL-FS--GSVRYNL----DPLSQ----FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLV 1140 (1255)
Q Consensus 1076 ~lR~----~i~~vpQdp~L-f~--gTIr~Nl----~~~~~----~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v 1140 (1255)
.+|. +|++|+|+|.- ++ -||-..| ..... ...+++.+ .|+.+|+.+--.. +
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~le------lL~~VgI~~p~~r--------l 151 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALE------LLELVGIPEPEKR--------L 151 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHH------HHHHcCCCchhhh--------h
Confidence 8875 79999999962 11 1332222 11111 12233333 5666666443211 2
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhh-cCEEEEE
Q 000845 1141 VQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMD-CNMVLSM 1217 (1255)
Q Consensus 1141 ~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl 1217 (1255)
..-...||||||||+.||-||..+|++||-||||.+||.....+|.+.|++.. .+..+++|||+|..++. +|||+||
T Consensus 152 ~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM 231 (534)
T COG4172 152 DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVM 231 (534)
T ss_pred hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEE
Confidence 22346799999999999999999999999999999999999999999998765 37899999999999987 8999999
Q ss_pred eCCEEEEEcChhHHhhcCChHHHHHHHHH
Q 000845 1218 SDGKLVEYDEPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1218 ~~G~ive~G~~~eLl~~~~~~f~~l~~~~ 1246 (1255)
.+|+|+|.|+.++|.++|.-.|.+++-+.
T Consensus 232 ~~G~ivE~~~t~~lF~~PqHpYTr~Ll~a 260 (534)
T COG4172 232 QHGEIVETGTTETLFAAPQHPYTRKLLAA 260 (534)
T ss_pred eccEEeecCcHHHHhhCCCChHHHHHHhc
Confidence 99999999999999999988898776554
No 400
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=100.00 E-value=1.2e-30 Score=306.63 Aligned_cols=107 Identities=20% Similarity=0.347 Sum_probs=94.5
Q ss_pred hhcCCCCCCChhHHHHHHHHHHHccCC---CeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEE
Q 000845 1139 LVVQDGANWSMGQRQLIGLGRVVLRRR---QILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMV 1214 (1255)
Q Consensus 1139 ~v~e~G~~LSgGQrQrl~lARAlL~~~---~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI 1214 (1255)
.+|.....|||||.||+-||.-|.+++ -++||||||.+|-.+--+.+.++|.++. +|.|||+|-|.|+.|+.||.|
T Consensus 815 ~LGQpatTLSGGEaQRvKLA~EL~k~~tg~TlYiLDEPTTGLH~~Di~kLl~VL~rLvd~GnTViVIEHNLdVIk~AD~I 894 (935)
T COG0178 815 KLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFDDIKKLLEVLHRLVDKGNTVIVIEHNLDVIKTADWI 894 (935)
T ss_pred ecCCccccccchHHHHHHHHHHHhhccCCCeEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecccceEeecCEE
Confidence 457777899999999999999999987 8999999999999999999988888765 689999999999999999999
Q ss_pred EEE------eCCEEEEEcChhHHhhcCChHHHHHHHH
Q 000845 1215 LSM------SDGKLVEYDEPKKLLRRQDSLFAQLVKE 1245 (1255)
Q Consensus 1215 ~vl------~~G~ive~G~~~eLl~~~~~~f~~l~~~ 1245 (1255)
+=| +.|+|+..|+|+|+.+.++|.=.+.+++
T Consensus 895 IDLGPeGG~~GG~iva~GTPeeva~~~~S~Tg~yLk~ 931 (935)
T COG0178 895 IDLGPEGGDGGGEIVASGTPEEVAKVKASYTGKYLKK 931 (935)
T ss_pred EEcCCCCCCCCceEEEecCHHHHHhCccchhHHHHHH
Confidence 998 4699999999999998776655555443
No 401
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-32 Score=291.98 Aligned_cols=163 Identities=36% Similarity=0.548 Sum_probs=133.9
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc---------------ccCC
Q 000845 443 HSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM---------------DLKM 507 (1255)
Q Consensus 443 ~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~---------------Di~~ 507 (1255)
..|+++|++|+|... ++|+||||++++|++++|+||||||||||+++|+|.++|.+|. -+..
T Consensus 3 ~~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgY 79 (254)
T COG1121 3 PMIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGY 79 (254)
T ss_pred cEEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEE
Confidence 368999999999753 5999999999999999999999999999999999999999981 0122
Q ss_pred CCCCC--------------------------------cc-------cc------ccCCCcCChHHHHHHHHHHHHccCCC
Q 000845 508 LPFGD--------------------------------LT-------QI------GERGVNLSGGQKQRIQLARALYQDRD 542 (1255)
Q Consensus 508 lp~gd--------------------------------~T-------~i------Ge~G~~LSGGQkqRIaLARAly~~~~ 542 (1255)
.|+.- .- .| ...-..|||||+|||-|||||.++|+
T Consensus 80 VPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~~LSGGQ~QRV~lARAL~~~p~ 159 (254)
T COG1121 80 VPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIGELSGGQKQRVLLARALAQNPD 159 (254)
T ss_pred cCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcccccCcHHHHHHHHHHHhccCCC
Confidence 22210 00 01 12346799999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChhHHhh
Q 000845 543 IYLLDDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFL-PAFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 543 ilLLDdp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l-~~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
+++|||||+++|+.+++.++ +++..+. +|+|+++|||+++.+ .++|+|+.|++ ++...|+.++...
T Consensus 160 lllLDEP~~gvD~~~~~~i~-~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~-~~~~~G~~~~~~~ 227 (254)
T COG1121 160 LLLLDEPFTGVDVAGQKEIY-DLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNR-HLIASGPPEEVLT 227 (254)
T ss_pred EEEecCCcccCCHHHHHHHH-HHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcC-eeEeccChhhccC
Confidence 99999999999999987765 6676654 399999999999986 57899999975 5778899888764
No 402
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=7.6e-32 Score=278.01 Aligned_cols=155 Identities=38% Similarity=0.589 Sum_probs=144.4
Q ss_pred EEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEE
Q 000845 1005 EIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGII 1084 (1255)
Q Consensus 1005 ~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~v 1084 (1255)
+++|++++|+. .++|+++||+|++||.++|+|+||||||||+++|.|+++|++|+|++||.++.......+++.++|+
T Consensus 1 ~~~~~~~~~~~--~~~l~~~~~~i~~g~~~~i~G~nGsGKStll~~l~g~~~~~~G~i~~~~~~~~~~~~~~~~~~i~~~ 78 (157)
T cd00267 1 EIENLSFRYGG--RTALDNVSLTLKAGEIVALVGPNGSGKSTLLRAIAGLLKPTSGEILIDGKDIAKLPLEELRRRIGYV 78 (157)
T ss_pred CeEEEEEEeCC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccCCHHHHHhceEEE
Confidence 36899999954 3599999999999999999999999999999999999999999999999999887777788899999
Q ss_pred ccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccC
Q 000845 1085 PQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRR 1164 (1255)
Q Consensus 1085 pQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~ 1164 (1255)
|| ||+||+||++||||++.+
T Consensus 79 ~q------------------------------------------------------------lS~G~~~r~~l~~~l~~~ 98 (157)
T cd00267 79 PQ------------------------------------------------------------LSGGQRQRVALARALLLN 98 (157)
T ss_pred ee------------------------------------------------------------CCHHHHHHHHHHHHHhcC
Confidence 99 999999999999999999
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeccCchhhhh-cCEEEEEeCCE
Q 000845 1165 RQILVLDEATASIDNATDSILQNTIRREFA-NCTVITVAHRIATVMD-CNMVLSMSDGK 1221 (1255)
Q Consensus 1165 ~~ILiLDE~TS~LD~~te~~i~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1221 (1255)
|++++|||||++||.++...+.+.+++..+ ++|++++||+++.+.. ||++++|++|+
T Consensus 99 ~~i~ilDEp~~~lD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~ 157 (157)
T cd00267 99 PDLLLLDEPTSGLDPASRERLLELLRELAEEGRTVIIVTHDPELAELAADRVIVLKDGK 157 (157)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCcC
Confidence 999999999999999999999999987644 5899999999999988 69999999985
No 403
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.98 E-value=3.9e-32 Score=281.66 Aligned_cols=154 Identities=26% Similarity=0.297 Sum_probs=135.8
Q ss_pred EEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEcc
Q 000845 1007 YDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQ 1086 (1255)
Q Consensus 1007 ~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQ 1086 (1255)
.||+++|.. ..+++++ |+|++||++||+||||||||||+++|.|+++|++|+|.+||.+ ++++||
T Consensus 4 ~~l~~~~~~--~~~l~~~-~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~------------i~~~~q 68 (177)
T cd03222 4 PDCVKRYGV--FFLLVEL-GVVKEGEVIGIVGPNGTGKTTAVKILAGQLIPNGDNDEWDGIT------------PVYKPQ 68 (177)
T ss_pred CCeEEEECC--EEEEccC-cEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCcEEEECCEE------------EEEEcc
Confidence 578999953 4689884 9999999999999999999999999999999999999999964 788888
Q ss_pred CCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCC
Q 000845 1087 DPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQ 1166 (1255)
Q Consensus 1087 dp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ 1166 (1255)
++. ||||||||++||||++++|+
T Consensus 69 ~~~---------------------------------------------------------LSgGq~qrv~laral~~~p~ 91 (177)
T cd03222 69 YID---------------------------------------------------------LSGGELQRVAIAAALLRNAT 91 (177)
T ss_pred cCC---------------------------------------------------------CCHHHHHHHHHHHHHhcCCC
Confidence 642 99999999999999999999
Q ss_pred eEEEecCCCCCCHHHHHHHHHHHHHHc-C-CcEEEEeccCchhhhh-cCEEEEEeCCEEEEE--cChhHHh
Q 000845 1167 ILVLDEATASIDNATDSILQNTIRREF-A-NCTVITVAHRIATVMD-CNMVLSMSDGKLVEY--DEPKKLL 1232 (1255)
Q Consensus 1167 ILiLDE~TS~LD~~te~~i~~~l~~~~-~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~--G~~~eLl 1232 (1255)
+++|||||++||+++.+.+.+.+++.. + ++|+|+|||+++.+.. ||+|++|+++-.+.. |.|..-+
T Consensus 92 lllLDEPts~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~~~~~~~~~~~~~~~~ 162 (177)
T cd03222 92 FYLFDEPSAYLDIEQRLNAARAIRRLSEEGKKTALVVEHDLAVLDYLSDRIHVFEGEPGVYGIASQPKGTR 162 (177)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHhCCEEEEEcCCCccceeccCCcchh
Confidence 999999999999999999999998764 3 3899999999999986 999999998766533 6665433
No 404
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=99.98 E-value=4e-32 Score=268.15 Aligned_cols=220 Identities=20% Similarity=0.352 Sum_probs=182.3
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcC-EeCCCCChHHh-hcc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDG-LDITTIGLYDL-RSN 1080 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG-~di~~i~~~~l-R~~ 1080 (1255)
.++++||++++. +-.+|+|+||+|.|||-=.|+||||+||||++..+.|-..|+.|+++++| .|++.++-+.. |..
T Consensus 5 iL~~~~vsVsF~--GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGKtrp~~G~v~f~g~~dl~~~~e~~IAr~G 82 (249)
T COG4674 5 ILYLDGVSVSFG--GFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGKTRPQEGEVLFDGDTDLTKLPEHRIARAG 82 (249)
T ss_pred eEEEeceEEEEc--ceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeecccCCCCcceEEEcCchhhccCCHHHHHHhc
Confidence 478999999995 34599999999999999999999999999999999999999999999999 99999998875 778
Q ss_pred cEEEccCCccCCC-chhhhcccCCCCChHHHHhc-cCc---------hhHHHhccHHHHHHhhhcCccchhcCCCCCCCh
Q 000845 1081 LGIIPQDPTLFSG-SVRYNLDPLSQFTDQEIWEV-TIP---------SQVLEKCQLREVIQEKKEGLDSLVVQDGANWSM 1149 (1255)
Q Consensus 1081 i~~vpQdp~Lf~g-TIr~Nl~~~~~~sd~ei~~~-~~~---------~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1149 (1255)
||-=+|.|..|.. |++|||+..... +..+|.. ..+ .++|...+|.+ ....-..+||.
T Consensus 83 IGRKFQ~PtVfe~ltV~eNLelA~~~-~k~v~a~L~~r~~~~e~~ride~La~igL~~-----------~~~~~A~~LSH 150 (249)
T COG4674 83 IGRKFQKPTVFENLTVRENLELALNR-DKSVFASLFARLRAEERRRIDELLATIGLGD-----------ERDRLAALLSH 150 (249)
T ss_pred cCccccCCeehhhccHHHHHHHHhcC-CcchHHHhhhhcChhHHHHHHHHHHHcccch-----------hhhhhhhhhcc
Confidence 9999999999976 999999643211 1112210 000 01444444433 33334467999
Q ss_pred hHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcCh
Q 000845 1150 GQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEP 1228 (1255)
Q Consensus 1150 GQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1228 (1255)
||||+|-|+-.+.++|++|+||||++++-.+..+..-+.+++....|++++|-|++.+++. +|+|-||.+|.|...|+-
T Consensus 151 GqKQwLEIGMll~Q~P~lLLlDEPvAGMTd~Et~~taeLl~~la~~hsilVVEHDM~Fvr~~A~~VTVlh~G~VL~EGsl 230 (249)
T COG4674 151 GQKQWLEIGMLLAQDPKLLLLDEPVAGMTDAETEKTAELLKSLAGKHSILVVEHDMGFVREIADKVTVLHEGSVLAEGSL 230 (249)
T ss_pred chhhhhhhheeeccCCcEEEecCccCCCcHHHHHHHHHHHHHHhcCceEEEEeccHHHHHHhhheeEEEeccceeecccH
Confidence 9999999999999999999999999999666666677778888889999999999999987 899999999999999999
Q ss_pred hHHhhcCC
Q 000845 1229 KKLLRRQD 1236 (1255)
Q Consensus 1229 ~eLl~~~~ 1236 (1255)
+++-++++
T Consensus 231 d~v~~dp~ 238 (249)
T COG4674 231 DEVQNDPK 238 (249)
T ss_pred HHhhcCcc
Confidence 99987753
No 405
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=99.98 E-value=4.6e-32 Score=285.03 Aligned_cols=155 Identities=34% Similarity=0.459 Sum_probs=126.9
Q ss_pred EEEEeeEEEecCCC-CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCC---------
Q 000845 445 IFIKSADLSWEADL-LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKML--------- 508 (1255)
Q Consensus 445 i~~~~~~f~w~~~~-~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~l--------- 508 (1255)
++++|++..|.... ..++|+++||+|++||+++|+||+||||||||+.|-|...|++| .|+..+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 45788888886543 24799999999999999999999999999999999999999988 122111
Q ss_pred --------------------------------CCCCc--------cc--cc-----cCCCcCChHHHHHHHHHHHHccCC
Q 000845 509 --------------------------------PFGDL--------TQ--IG-----ERGVNLSGGQKQRIQLARALYQDR 541 (1255)
Q Consensus 509 --------------------------------p~gd~--------T~--iG-----e~G~~LSGGQkqRIaLARAly~~~ 541 (1255)
+.+.. .. ++ .....||||||||||+|||+..+|
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P 161 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNP 161 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCC
Confidence 11100 00 12 346799999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHhhh--cCCcEEEEEccCCCccccCCEEEEEeCCEEE
Q 000845 542 DIYLLDDPFSALDAKTAKFLFTEYVMGA--LSKKTVLLVTHQVDFLPAFDSILLISGGEII 600 (1255)
Q Consensus 542 ~ilLLDdp~SaLD~~~~~~i~~~~i~~~--l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~ 600 (1255)
+|+|.||||.+||.++++.|++ ++..+ .+|+|+|+|||+......||+++.|.||++.
T Consensus 162 ~iilADEPTgnLD~~t~~~V~~-ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 162 KIILADEPTGNLDSKTAKEVLE-LLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred CeEEeeCccccCChHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 9999999999999999998875 44443 3489999999999999999999999999853
No 406
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]
Probab=99.98 E-value=2.6e-31 Score=275.20 Aligned_cols=210 Identities=20% Similarity=0.320 Sum_probs=170.5
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCCh-HHhhcc
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGL-YDLRSN 1080 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~-~~lR~~ 1080 (1255)
--|+++||+++|. ++++|+|||++|+|||+.+|+|+||||||||++++.+.++|++|.+.+-|...-+.+. .++|++
T Consensus 30 ~li~l~~v~v~r~--gk~iL~~isW~V~~ge~W~I~G~NGsGKTTLL~ll~~~~~pssg~~~~~G~~~G~~~~~~elrk~ 107 (257)
T COG1119 30 PLIELKNVSVRRN--GKKILGDLSWQVNPGEHWAIVGPNGAGKTTLLSLLTGEHPPSSGDVTLLGRRFGKGETIFELRKR 107 (257)
T ss_pred ceEEecceEEEEC--CEeeccccceeecCCCcEEEECCCCCCHHHHHHHHhcccCCCCCceeeeeeeccCCcchHHHHHH
Confidence 3599999999994 4579999999999999999999999999999999999999999999999999988888 999999
Q ss_pred cEEEccCCc---cCCCchhhhcc--------cCC-CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1081 LGIIPQDPT---LFSGSVRYNLD--------PLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1081 i~~vpQdp~---Lf~gTIr~Nl~--------~~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
||+|+-+-. .=.-++||-+. .+. ..++++..+ ....++.+++.+.. +..=..||
T Consensus 108 IG~vS~~L~~~~~~~~~v~dvVlSg~~~siG~y~~~~~~~~~~~---a~~lle~~g~~~la-----------~r~~~~LS 173 (257)
T COG1119 108 IGLVSSELHERFRVRETVRDVVLSGFFASIGIYQEDLTAEDLAA---AQWLLELLGAKHLA-----------DRPFGSLS 173 (257)
T ss_pred hCccCHHHHhhcccccccceeeeecccccccccccCCCHHHHHH---HHHHHHHcchhhhc-----------cCchhhcC
Confidence 999975322 12335555442 111 344444322 12255666655432 12224699
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC---CcEEEEeccCchhhhh-cCEEEEEeCCEEEE
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA---NCTVITVAHRIATVMD-CNMVLSMSDGKLVE 1224 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~---~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive 1224 (1255)
.|||||+-|||||+++|++|||||||++||....+.+.+.+.+... +.|+|+|||+.+.+.. +++++.+++|+++.
T Consensus 174 ~Ge~rrvLiaRALv~~P~LLiLDEP~~GLDl~~re~ll~~l~~~~~~~~~~~ll~VtHh~eEi~~~~th~lll~~g~v~~ 253 (257)
T COG1119 174 QGEQRRVLIARALVKDPELLILDEPAQGLDLIAREQLLNRLEELAASPGAPALLFVTHHAEEIPPCFTHRLLLKEGEVVA 253 (257)
T ss_pred HhHHHHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHhcCCCCceEEEEEcchhhcccccceEEEeeCCceee
Confidence 9999999999999999999999999999999999999888887653 5689999999999977 59999999999998
Q ss_pred EcC
Q 000845 1225 YDE 1227 (1255)
Q Consensus 1225 ~G~ 1227 (1255)
.|.
T Consensus 254 ~g~ 256 (257)
T COG1119 254 QGK 256 (257)
T ss_pred ccc
Confidence 874
No 407
>cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=99.97 E-value=1e-31 Score=278.22 Aligned_cols=160 Identities=21% Similarity=0.272 Sum_probs=132.2
Q ss_pred CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhh
Q 000845 1018 PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRY 1097 (1255)
Q Consensus 1018 ~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~ 1097 (1255)
.++|+|+||+|++||+++|+||||||||||++++++ ++|++.++|.. ... .|+++++++|
T Consensus 8 ~~~l~~isl~i~~G~~~~l~G~nG~GKSTLl~~il~----~~G~v~~~~~~-~~~----~~~~~~~~~q----------- 67 (176)
T cd03238 8 VHNLQNLDVSIPLNVLVVVTGVSGSGKSTLVNEGLY----ASGKARLISFL-PKF----SRNKLIFIDQ----------- 67 (176)
T ss_pred eeeecceEEEEcCCCEEEEECCCCCCHHHHHHHHhh----cCCcEEECCcc-ccc----ccccEEEEhH-----------
Confidence 458999999999999999999999999999999963 69999998762 221 2456888887
Q ss_pred hcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccC--CCeEEEecCCC
Q 000845 1098 NLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRR--RQILVLDEATA 1175 (1255)
Q Consensus 1098 Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~--~~ILiLDE~TS 1175 (1255)
.+ +++..++.+. .......+||+|||||++||||++++ |+++||||||+
T Consensus 68 -------------~~------~l~~~~L~~~----------~~~~~~~~LSgGq~qrl~laral~~~~~p~llLlDEPt~ 118 (176)
T cd03238 68 -------------LQ------FLIDVGLGYL----------TLGQKLSTLSGGELQRVKLASELFSEPPGTLFILDEPST 118 (176)
T ss_pred -------------HH------HHHHcCCCcc----------ccCCCcCcCCHHHHHHHHHHHHHhhCCCCCEEEEeCCcc
Confidence 12 5556554321 13334568999999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhcCEEEEEeC------CEEEEEc
Q 000845 1176 SIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDCNMVLSMSD------GKLVEYD 1226 (1255)
Q Consensus 1176 ~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~------G~ive~G 1226 (1255)
+||+++.+.+.+.|++.. .++|||+|||+++.+..||+|++|++ |++||.|
T Consensus 119 ~LD~~~~~~l~~~l~~~~~~g~tvIivSH~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 176 (176)
T cd03238 119 GLHQQDINQLLEVIKGLIDLGNTVILIEHNLDVLSSADWIIDFGPGSGKSGGKVVFSG 176 (176)
T ss_pred cCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEECCCCCCCCcEEEecC
Confidence 999999999999998865 47999999999999888999999955 6666654
No 408
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=99.97 E-value=4.2e-32 Score=303.97 Aligned_cols=167 Identities=31% Similarity=0.414 Sum_probs=140.1
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------ccc-----------
Q 000845 443 HSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDL----------- 505 (1255)
Q Consensus 443 ~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di----------- 505 (1255)
..++++|++.+|. +.++++|+||+|++||++++.|||||||||+|++|.|+..|++| .|+
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 4789999999998 35899999999999999999999999999999999999999998 233
Q ss_pred ------CCCCCC---------Cc-------cc-----------c------ccCCCcCChHHHHHHHHHHHHccCCCEEEE
Q 000845 506 ------KMLPFG---------DL-------TQ-----------I------GERGVNLSGGQKQRIQLARALYQDRDIYLL 546 (1255)
Q Consensus 506 ------~~lp~g---------d~-------T~-----------i------Ge~G~~LSGGQkqRIaLARAly~~~~ilLL 546 (1255)
+.||+= -. .+ | ..+...|||||||||||||||..+|+++||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~vLLL 160 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARALVPEPKVLLL 160 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhhhChHHHHHHHHHHHhhcCcchhhh
Confidence 333320 00 00 1 235689999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCc-cccCCEEEEEeCCEEEEecChhHHhhcc
Q 000845 547 DDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDF-LPAFDSILLISGGEIIQAATYDHLLVTS 612 (1255)
Q Consensus 547 Ddp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~-l~~aD~Iivl~~G~i~~~G~~~el~~~~ 612 (1255)
|||+||||.+.++++-.++..... .|.|.|+|||+.+. +..+|+|+||++|+|.+.|+++|+....
T Consensus 161 DEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 161 DEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred cCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 999999999999888655543222 39999999999875 6788999999999999999999997543
No 409
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.3e-31 Score=332.33 Aligned_cols=210 Identities=21% Similarity=0.306 Sum_probs=157.2
Q ss_pred EEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEE
Q 000845 1004 VEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGI 1083 (1255)
Q Consensus 1004 I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1083 (1255)
|+++||+++|+. ..+|+|+||+|++||++|||||||||||||+++|.|+++|++|+|.++|.. +++|
T Consensus 2 i~i~nls~~~g~--~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~-----------~i~~ 68 (638)
T PRK10636 2 IVFSSLQIRRGV--RVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNW-----------QLAW 68 (638)
T ss_pred EEEEEEEEEeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCC-----------EEEE
Confidence 789999999953 469999999999999999999999999999999999999999999999842 4888
Q ss_pred EccCCccCCCchhhhcccC----CCCCh-----------HHHHhccCchhHHHh-------ccHHHHHHhhhcCcc-chh
Q 000845 1084 IPQDPTLFSGSVRYNLDPL----SQFTD-----------QEIWEVTIPSQVLEK-------CQLREVIQEKKEGLD-SLV 1140 (1255)
Q Consensus 1084 vpQdp~Lf~gTIr~Nl~~~----~~~sd-----------~ei~~~~~~~~al~~-------~~l~~~i~~lp~gld-t~v 1140 (1255)
++|++..+..|+.+++... ...+. ..+... ....+. ..+.+.+..+ |++ ...
T Consensus 69 ~~q~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~~l--gl~~~~~ 143 (638)
T PRK10636 69 VNQETPALPQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATI---HGKLDAIDAWTIRSRAASLLHGL--GFSNEQL 143 (638)
T ss_pred EecCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHH---HHHHHhcCCcchHHHHHHHHHhC--CCCchhh
Confidence 8887655555555444210 00000 000000 000000 0111222222 332 122
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeC
Q 000845 1141 VQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSD 1219 (1255)
Q Consensus 1141 ~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~ 1219 (1255)
.....+||||||||++|||||+.+|+||||||||++||+++...+.+.|++. +.|||+|||+++.+.. ||+|++|++
T Consensus 144 ~~~~~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~--~~tviivsHd~~~l~~~~d~i~~L~~ 221 (638)
T PRK10636 144 ERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSY--QGTLILISHDRDFLDPIVDKIIHIEQ 221 (638)
T ss_pred cCchhhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHhcCEEEEEeC
Confidence 3344679999999999999999999999999999999999999999999874 5799999999999976 999999999
Q ss_pred CEEEE-EcChhHHhh
Q 000845 1220 GKLVE-YDEPKKLLR 1233 (1255)
Q Consensus 1220 G~ive-~G~~~eLl~ 1233 (1255)
|++++ .|++.....
T Consensus 222 G~i~~~~g~~~~~~~ 236 (638)
T PRK10636 222 QSLFEYTGNYSSFEV 236 (638)
T ss_pred CEEEEecCCHHHHHH
Confidence 99975 577776654
No 410
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=3.6e-32 Score=278.80 Aligned_cols=164 Identities=34% Similarity=0.484 Sum_probs=138.4
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCCCCC------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKMLPFG------ 511 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~lp~g------ 511 (1255)
.|+++|++..||.. +.+|+||||+|++||+++|+|++||||||||++|.|..++++| .++..++..
T Consensus 3 ~i~~~nl~k~yp~~--~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPGG--HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCCC--ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 58999999999843 5899999999999999999999999999999999999999998 111111110
Q ss_pred -------------------------------------------C-------ccccc------cCCCcCChHHHHHHHHHH
Q 000845 512 -------------------------------------------D-------LTQIG------ERGVNLSGGQKQRIQLAR 535 (1255)
Q Consensus 512 -------------------------------------------d-------~T~iG------e~G~~LSGGQkqRIaLAR 535 (1255)
| .+.+| .+..+|||||+|||+|||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~~LSGGQQQRVaIAR 160 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRASTLSGGQQQRVAIAR 160 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhccCCcchhHHHHHHH
Confidence 0 01122 366899999999999999
Q ss_pred HHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhh-hcCCcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChhHHh
Q 000845 536 ALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMG-ALSKKTVLLVTHQVDFL-PAFDSILLISGGEIIQAATYDHLL 609 (1255)
Q Consensus 536 Aly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~-~l~~kTvIlvTH~l~~l-~~aD~Iivl~~G~i~~~G~~~el~ 609 (1255)
||+++|+|+|-|||+++|||.+++++++.+.+- ...|.|+|+.-|++++. ++||||+-|++|+|++.|+.+|+.
T Consensus 161 aL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 161 ALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred HHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 999999999999999999999999997655432 33589999999999986 589999999999999999998863
No 411
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=8.5e-32 Score=275.28 Aligned_cols=210 Identities=24% Similarity=0.439 Sum_probs=178.5
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.+++++|+.+|. ...|++|+||+++||+..|++|+|||||||.+++|+|+++|++|+|.++|.+++. ..+.+||
T Consensus 2 ~L~ie~vtK~Fg--~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~----~~~~rIG 75 (300)
T COG4152 2 ALEIEGVTKSFG--DKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQ----EIKNRIG 75 (300)
T ss_pred ceEEecchhccC--ceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhh----hhhhhcc
Confidence 478999999995 3569999999999999999999999999999999999999999999999999875 4688999
Q ss_pred EEccCCccCCC-chhhhcccCCC---CChHHHHhccCchhHHHhccHHHHHHhhh--cCccchhcCCCCCCChhHHHHHH
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLSQ---FTDQEIWEVTIPSQVLEKCQLREVIQEKK--EGLDSLVVQDGANWSMGQRQLIG 1156 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~~---~sd~ei~~~~~~~~al~~~~l~~~i~~lp--~gldt~v~e~G~~LSgGQrQrl~ 1156 (1255)
|+|-+--|+.. |+.|-|.++.. ...+|+.. .+..+.+++. +.....| ..||-|.+|++.
T Consensus 76 yLPEERGLy~k~tv~dql~yla~LkGm~~~e~~~-----------~~~~wLer~~i~~~~~~kI----k~LSKGnqQKIQ 140 (300)
T COG4152 76 YLPEERGLYPKMTVEDQLKYLAELKGMPKAEIQK-----------KLQAWLERLEIVGKKTKKI----KELSKGNQQKIQ 140 (300)
T ss_pred cChhhhccCccCcHHHHHHHHHHhcCCcHHHHHH-----------HHHHHHHhccccccccchH----HHhhhhhhHHHH
Confidence 99999999975 99999876542 44454432 1233333321 1122222 469999999999
Q ss_pred HHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhh
Q 000845 1157 LGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLR 1233 (1255)
Q Consensus 1157 lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~ 1233 (1255)
+--|++++|.++|||||.|+|||.+.+.+.+.+.+.. .|.|||+-+||++.+.. ||+++.|++|+.|-+|+-++..+
T Consensus 141 fisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~ 219 (300)
T COG4152 141 FISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRR 219 (300)
T ss_pred HHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHH
Confidence 9999999999999999999999999999999998765 58999999999999987 99999999999999999888765
No 412
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=99.97 E-value=3e-31 Score=293.43 Aligned_cols=172 Identities=33% Similarity=0.508 Sum_probs=142.9
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------cc-------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DL------------- 505 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di------------- 505 (1255)
++++|++++|+.. .+++|+|+||++++||+++|+|+||||||||+++|+|.++|.+|. ++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4689999999643 247999999999999999999999999999999999999998881 10
Q ss_pred ------------------------------------------CCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCE
Q 000845 506 ------------------------------------------KMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDI 543 (1255)
Q Consensus 506 ------------------------------------------~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~i 543 (1255)
..+|.|..+..+..+.+|||||||||+||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 01111222233456789999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHHHHH
Q 000845 544 YLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEFQDL 618 (1255)
Q Consensus 544 lLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~~~l 618 (1255)
+||||||++||+.+.+.+. +.+..+.+++|+|++||+++.+..||+|++|++|++++.|+.+++....+.+..+
T Consensus 160 lllDEP~~~LD~~~~~~l~-~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~ 233 (237)
T cd03252 160 LIFDEATSALDYESEHAIM-RNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYL 233 (237)
T ss_pred EEEeCCcccCCHHHHHHHH-HHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHH
Confidence 9999999999999987775 4555555689999999999998889999999999999999999887665555443
No 413
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=99.97 E-value=7.2e-32 Score=263.52 Aligned_cols=161 Identities=34% Similarity=0.468 Sum_probs=128.7
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCCCCCC------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKMLPFGD------ 512 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~lp~gd------ 512 (1255)
+.++++.|+|...+ -..+++|++||.++|+||+||||||||++|.|+..|.+| .|....|..+
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 45678889987543 247899999999999999999999999999999999998 1211111100
Q ss_pred ------------------------------c-------cccc------cCCCcCChHHHHHHHHHHHHccCCCEEEEeCc
Q 000845 513 ------------------------------L-------TQIG------ERGVNLSGGQKQRIQLARALYQDRDIYLLDDP 549 (1255)
Q Consensus 513 ------------------------------~-------T~iG------e~G~~LSGGQkqRIaLARAly~~~~ilLLDdp 549 (1255)
. ..+| .-..+|||||||||||||++.++.+|+|||||
T Consensus 77 FQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~LSGGqRQRvALARclvR~~PilLLDEP 156 (231)
T COG3840 77 FQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPGELSGGQRQRVALARCLVREQPILLLDEP 156 (231)
T ss_pred hhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCccccCchHHHHHHHHHHHhccCCeEEecCc
Confidence 0 1122 23468999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhhc
Q 000845 550 FSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 550 ~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
||||||.-+.... .++..+. ++.|+++|||+++.+. .+|+++++++|+|+++|..+++...
T Consensus 157 FsALdP~LR~eMl-~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 157 FSALDPALRAEML-ALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred hhhcCHHHHHHHH-HHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 9999999876654 4444433 5889999999999865 5799999999999999999888754
No 414
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3e-31 Score=295.55 Aligned_cols=164 Identities=32% Similarity=0.436 Sum_probs=137.2
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCCCCCCc----
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKMLPFGDL---- 513 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~lp~gd~---- 513 (1255)
.|+++|++.+|... .+|+|+||+|++||+++++|||||||||||++|.|..+|++| .|+..+|..+.
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iam 79 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAM 79 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEE
Confidence 58999999999753 299999999999999999999999999999999999999998 23333322211
Q ss_pred ---------------------------------------------cccccCCCcCChHHHHHHHHHHHHccCCCEEEEeC
Q 000845 514 ---------------------------------------------TQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDD 548 (1255)
Q Consensus 514 ---------------------------------------------T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDd 548 (1255)
-....+...||||||||||||||+.++|+++||||
T Consensus 80 VFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DE 159 (338)
T COG3839 80 VFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPKVFLLDE 159 (338)
T ss_pred EeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEecC
Confidence 11234678999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 549 PFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFL-PAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 549 p~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l-~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
|+|.||++....+-.++ ..+. -+.|+|.|||+.... ..+|+|+||++|+|.+.|++.|+..+
T Consensus 160 PlSnLDa~lR~~mr~ei-~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~ 224 (338)
T COG3839 160 PLSNLDAKLRVLMRSEI-KKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYER 224 (338)
T ss_pred chhHhhHHHHHHHHHHH-HHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhC
Confidence 99999999987765444 3332 378999999997664 57899999999999999999998754
No 415
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=99.97 E-value=1.8e-30 Score=291.03 Aligned_cols=171 Identities=40% Similarity=0.644 Sum_probs=145.5
Q ss_pred CcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc-----------------
Q 000845 441 LEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM----------------- 503 (1255)
Q Consensus 441 ~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~----------------- 503 (1255)
....++++|+++.+ +++|+|+||++++|++++|+|+||||||||+++|+|.++|.+|.
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~~~l~ 110 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQFSWIM 110 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCccccc
Confidence 45679999999962 36999999999999999999999999999999999999998881
Q ss_pred ------------------------------ccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCC
Q 000845 504 ------------------------------DLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSAL 553 (1255)
Q Consensus 504 ------------------------------Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaL 553 (1255)
.+..+|.+..|.+++++.+||||||||++||||++++|+++||||||++|
T Consensus 111 ~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gL 190 (282)
T cd03291 111 PGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYL 190 (282)
T ss_pred ccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccC
Confidence 01122344455666777899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHHH
Q 000845 554 DAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEFQ 616 (1255)
Q Consensus 554 D~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~~ 616 (1255)
|+.+.+.+.+.++..+.+++|+|++||+++.+..||+|++|++|++++.|+.+++.....++.
T Consensus 191 D~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 253 (282)
T cd03291 191 DVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLRPDFS 253 (282)
T ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcchHHH
Confidence 999988777666655556899999999999998899999999999999999998875444443
No 416
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=3.5e-31 Score=280.75 Aligned_cols=163 Identities=36% Similarity=0.476 Sum_probs=133.5
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------c---ccCCCCCCC---
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------M---DLKMLPFGD--- 512 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~---Di~~lp~gd--- 512 (1255)
|.++|++..|+. .++++|||++|+.||++++.|||||||||||++|.|...|+.| + |...++..+
T Consensus 3 i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~V 79 (345)
T COG1118 3 IRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKV 79 (345)
T ss_pred eeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcce
Confidence 677888888875 3689999999999999999999999999999999999999999 1 322221111
Q ss_pred -----------------------------------cccc------------c-cCCCcCChHHHHHHHHHHHHccCCCEE
Q 000845 513 -----------------------------------LTQI------------G-ERGVNLSGGQKQRIQLARALYQDRDIY 544 (1255)
Q Consensus 513 -----------------------------------~T~i------------G-e~G~~LSGGQkqRIaLARAly~~~~il 544 (1255)
.+.+ + .....||||||||||||||+..+|++|
T Consensus 80 GfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALARALA~eP~vL 159 (345)
T COG1118 80 GFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPAQLSGGQRQRVALARALAVEPKVL 159 (345)
T ss_pred eEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCchhcChHHHHHHHHHHHhhcCCCeE
Confidence 0111 1 235789999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHhhhc-C-CcEEEEEccCCCc-cccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 545 LLDDPFSALDAKTAKFLFTEYVMGAL-S-KKTVLLVTHQVDF-LPAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 545 LLDdp~SaLD~~~~~~i~~~~i~~~l-~-~kTvIlvTH~l~~-l~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
||||||+|||+++.+.+ ++-+..+. + +.|+|+|||+.++ ++.||+|++|++|+|...|+.+|....
T Consensus 160 LLDEPf~ALDa~vr~~l-r~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~ 228 (345)
T COG1118 160 LLDEPFGALDAKVRKEL-RRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDH 228 (345)
T ss_pred eecCCchhhhHHHHHHH-HHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcC
Confidence 99999999999998766 44443332 3 8899999999987 467899999999999999999998643
No 417
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=99.97 E-value=1.3e-30 Score=288.57 Aligned_cols=167 Identities=34% Similarity=0.533 Sum_probs=139.1
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------cc-------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DL------------- 505 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di------------- 505 (1255)
++++|+++.|+.....++|+|+||++++||+++|+|+||||||||+++|.|.++|.+|. ++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 36889999997543357999999999999999999999999999999999999998881 10
Q ss_pred ------------------------------------------CCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCE
Q 000845 506 ------------------------------------------KMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDI 543 (1255)
Q Consensus 506 ------------------------------------------~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~i 543 (1255)
..+|.|..+..+....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 01122223334445678999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcc
Q 000845 544 YLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTS 612 (1255)
Q Consensus 544 lLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~ 612 (1255)
+||||||++||+.+.+.+. +++..+.+++|+|++||+++.+..||+|++|++|++++.|+.+++....
T Consensus 161 lllDEP~~gLD~~~~~~l~-~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 228 (238)
T cd03249 161 LLLDEATSALDAESEKLVQ-EALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQK 228 (238)
T ss_pred EEEeCccccCCHHHHHHHH-HHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcC
Confidence 9999999999999988775 4555544789999999999998889999999999999999988776543
No 418
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=99.97 E-value=2.6e-30 Score=324.03 Aligned_cols=213 Identities=22% Similarity=0.288 Sum_probs=156.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
-|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.. .++
T Consensus 3 ~l~i~~ls~~~~~--~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~~~-----------~~~ 69 (635)
T PRK11147 3 LISIHGAWLSFSD--APLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQDL-----------IVA 69 (635)
T ss_pred EEEEeeEEEEeCC--ceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCCCC-----------EEE
Confidence 3889999999953 469999999999999999999999999999999999999999999998731 267
Q ss_pred EEccCCcc-CCCchhhhcccCC------------------CCChHHHHhccC-chhHHHh-------ccHHHHHHhhhcC
Q 000845 1083 IIPQDPTL-FSGSVRYNLDPLS------------------QFTDQEIWEVTI-PSQVLEK-------CQLREVIQEKKEG 1135 (1255)
Q Consensus 1083 ~vpQdp~L-f~gTIr~Nl~~~~------------------~~sd~ei~~~~~-~~~al~~-------~~l~~~i~~lp~g 1135 (1255)
+++|++.. ..+++.+++.... ..+.++...... ....+.. ..+.+.+..+ |
T Consensus 70 ~l~q~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--g 147 (635)
T PRK11147 70 RLQQDPPRNVEGTVYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQL--G 147 (635)
T ss_pred EeccCCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhC--C
Confidence 78887642 2356665542100 000011000000 0000000 0111222222 3
Q ss_pred ccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEE
Q 000845 1136 LDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMV 1214 (1255)
Q Consensus 1136 ldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI 1214 (1255)
++ .......||||||||++|||||+.+|+||||||||++||+++.+.+.+.|++. +.|||+|||+++.+.. ||+|
T Consensus 148 l~--~~~~~~~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~--~~tvlivsHd~~~l~~~~d~i 223 (635)
T PRK11147 148 LD--PDAALSSLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTF--QGSIIFISHDRSFIRNMATRI 223 (635)
T ss_pred CC--CCCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHhcCeE
Confidence 32 12334579999999999999999999999999999999999999999999876 3699999999999976 8999
Q ss_pred EEEeCCEEEE-EcChhHHhhc
Q 000845 1215 LSMSDGKLVE-YDEPKKLLRR 1234 (1255)
Q Consensus 1215 ~vl~~G~ive-~G~~~eLl~~ 1234 (1255)
++|++|+++. .|++.+.+..
T Consensus 224 ~~L~~G~i~~~~g~~~~~~~~ 244 (635)
T PRK11147 224 VDLDRGKLVSYPGNYDQYLLE 244 (635)
T ss_pred EEEECCEEEEecCCHHHHHHH
Confidence 9999999986 4888876553
No 419
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.2e-30 Score=287.29 Aligned_cols=164 Identities=34% Similarity=0.588 Sum_probs=139.4
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------c-------------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------D------------- 504 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------D------------- 504 (1255)
.++++|++++|+.. +++++|+||++++|++++|+||||||||||+++|.|..+|.+|. +
T Consensus 2 ~l~~~~l~~~~~~~--~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDEK--KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCCC--CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 47899999999632 36999999999999999999999999999999999999998880 0
Q ss_pred ------------------------------------------cCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCC
Q 000845 505 ------------------------------------------LKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRD 542 (1255)
Q Consensus 505 ------------------------------------------i~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ 542 (1255)
++.+|.|..+..+....+|||||||||+||||++++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 01122233344455668999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhh
Q 000845 543 IYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 543 ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
++||||||++||+.+.+.+. +++..+.+++|+|++||+++.++.||+|++|++|++++.|+.+++..
T Consensus 160 llllDEP~~~LD~~~~~~l~-~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQ-EALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHH-HHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999988775 55655556899999999999988899999999999999998877653
No 420
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=99.97 E-value=8.2e-31 Score=300.43 Aligned_cols=166 Identities=31% Similarity=0.428 Sum_probs=136.9
Q ss_pred EEEEeeEEEecCCC-CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCCCC-------
Q 000845 445 IFIKSADLSWEADL-LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKMLPF------- 510 (1255)
Q Consensus 445 i~~~~~~f~w~~~~-~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~lp~------- 510 (1255)
|+++|++++|+... ..++|+|+||++++||+++|+|+||||||||+++|.|..+|.+| .|+..++.
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 68999999996422 24799999999999999999999999999999999999999988 22211110
Q ss_pred --------C-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCE
Q 000845 511 --------G-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDI 543 (1255)
Q Consensus 511 --------g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~i 543 (1255)
. ..| ........|||||||||+||||+..+|++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~~~P~i 161 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKV 161 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHhCCCE
Confidence 0 000 01234578999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhhc
Q 000845 544 YLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 544 lLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
+||||||||||+.+.+.+. +++..+. .+.|+|++||+++.+. .||+|++|++|++++.|+.+++...
T Consensus 162 LLlDEPts~LD~~t~~~i~-~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~ 231 (343)
T TIGR02314 162 LLCDEATSALDPATTQSIL-ELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSH 231 (343)
T ss_pred EEEeCCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcC
Confidence 9999999999999998886 4554443 3899999999999985 5899999999999999999998643
No 421
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=99.97 E-value=2.2e-30 Score=289.27 Aligned_cols=169 Identities=32% Similarity=0.510 Sum_probs=146.0
Q ss_pred CcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc-----------------
Q 000845 441 LEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM----------------- 503 (1255)
Q Consensus 441 ~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~----------------- 503 (1255)
..+.++++|++++|+.. ..++|+|+||++++|++++|+|++|||||||+++|+|+++|.+|.
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 34679999999999753 247999999999999999999999999999999999999998880
Q ss_pred -------------------------------------------ccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccC
Q 000845 504 -------------------------------------------DLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQD 540 (1255)
Q Consensus 504 -------------------------------------------Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~ 540 (1255)
.+..+|.|.+|.+++.+.+||||||||++||||++++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~ 174 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRK 174 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcC
Confidence 0112344566667778889999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 541 RDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 541 ~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
|+++||||||++||+++.+.+ .+++..+.+++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 175 p~llllDEPt~gLD~~~~~~l-~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 244 (257)
T cd03288 175 SSILIMDEATASIDMATENIL-QKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQ 244 (257)
T ss_pred CCEEEEeCCccCCCHHHHHHH-HHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhc
Confidence 999999999999999997666 4556555568999999999999988999999999999999999988754
No 422
>COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=4.3e-30 Score=262.52 Aligned_cols=214 Identities=24% Similarity=0.323 Sum_probs=180.3
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhcc--CCCCCCEEEEcCEeCCCCChHH-hhc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRL--VEPTGGKIIIDGLDITTIGLYD-LRS 1079 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl--~~~~~G~I~idG~di~~i~~~~-lR~ 1079 (1255)
-++++|++++-... +.+|++||++|++||..+|.||||||||||.++|+|. |++++|+|.+||.||.++++++ -|.
T Consensus 3 ~L~I~dLhv~v~~~-keILkgvnL~v~~GEvhaiMGPNGsGKSTLa~~i~G~p~Y~Vt~G~I~~~GedI~~l~~~ERAr~ 81 (251)
T COG0396 3 MLEIKDLHVEVEGK-KEILKGVNLTVKEGEVHAIMGPNGSGKSTLAYTIMGHPKYEVTEGEILFDGEDILELSPDERARA 81 (251)
T ss_pred eeEEeeeEEEecCc-hhhhcCcceeEcCCcEEEEECCCCCCHHHHHHHHhCCCCceEecceEEECCcccccCCHhHHHhc
Confidence 47899999887532 4699999999999999999999999999999999996 5889999999999999999987 577
Q ss_pred ccEEEccCCccCCC-chhhhcccCCC----------CChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCC
Q 000845 1080 NLGIIPQDPTLFSG-SVRYNLDPLSQ----------FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWS 1148 (1255)
Q Consensus 1080 ~i~~vpQdp~Lf~g-TIr~Nl~~~~~----------~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1148 (1255)
.|.+-.|.|.=++| |+++-|..... ...+++.+ +++..++++.. ++..|.+ .||
T Consensus 82 GifLafQ~P~ei~GV~~~~fLr~a~n~~~~~~~~~~~~~~~~~e------~~~~l~~~~~~------l~R~vN~---GFS 146 (251)
T COG0396 82 GIFLAFQYPVEIPGVTNSDFLRAAMNARRGARGILPEFIKELKE------KAELLGLDEEF------LERYVNE---GFS 146 (251)
T ss_pred CCEEeecCCccCCCeeHHHHHHHHHHhhhccccccHHHHHHHHH------HHHHcCCCHHH------hhcccCC---CcC
Confidence 89999999999999 88877742110 01223333 66677766522 3344444 499
Q ss_pred hhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeccCchhhhhc--CEEEEEeCCEEEEE
Q 000845 1149 MGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF-ANCTVITVAHRIATVMDC--NMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1149 gGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~--DrI~vl~~G~ive~ 1225 (1255)
||||.|.-|+.+++-+|++.|||||-|+||..+-+.|-+.+++.. +++++++|||+-+.+... |+|.||-+|+|+..
T Consensus 147 GGEkKR~EilQ~~~lePkl~ILDE~DSGLDIdalk~V~~~i~~lr~~~~~~liITHy~rll~~i~pD~vhvl~~GrIv~s 226 (251)
T COG0396 147 GGEKKRNEILQLLLLEPKLAILDEPDSGLDIDALKIVAEGINALREEGRGVLIITHYQRLLDYIKPDKVHVLYDGRIVKS 226 (251)
T ss_pred cchHHHHHHHHHHhcCCCEEEecCCCcCccHHHHHHHHHHHHHHhcCCCeEEEEecHHHHHhhcCCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999999999998876 478999999998888764 99999999999999
Q ss_pred cChhHHhh
Q 000845 1226 DEPKKLLR 1233 (1255)
Q Consensus 1226 G~~~eLl~ 1233 (1255)
|.| ||..
T Consensus 227 G~~-el~~ 233 (251)
T COG0396 227 GDP-ELAE 233 (251)
T ss_pred CCH-HHHH
Confidence 999 7765
No 423
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=2e-30 Score=286.35 Aligned_cols=166 Identities=35% Similarity=0.558 Sum_probs=140.4
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc---------------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM--------------------- 503 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~--------------------- 503 (1255)
++++|++++|+... .++++|+||++++|++++|+||||||||||+++|.|.++|.+|.
T Consensus 1 i~~~~l~~~~~~~~-~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGDG-PPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCCC-ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 46889999996432 37999999999999999999999999999999999999998880
Q ss_pred ----c------------------------------------cCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCE
Q 000845 504 ----D------------------------------------LKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDI 543 (1255)
Q Consensus 504 ----D------------------------------------i~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~i 543 (1255)
+ +..+|.|..+..+.+..+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 0 001122333445566789999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcc
Q 000845 544 YLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTS 612 (1255)
Q Consensus 544 lLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~ 612 (1255)
+||||||++||+.+.+.+. +++..+.+++|+|++||+++.+..||+|++|++|++++.|+.+++....
T Consensus 160 llLDEP~~~LD~~~~~~l~-~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 227 (234)
T cd03251 160 LILDEATSALDTESERLVQ-AALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQG 227 (234)
T ss_pred EEEeCccccCCHHHHHHHH-HHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcC
Confidence 9999999999999987774 5666666789999999999998889999999999999999988876443
No 424
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=99.97 E-value=9.7e-31 Score=258.26 Aligned_cols=156 Identities=28% Similarity=0.477 Sum_probs=132.8
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC----------------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG---------------------- 502 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G---------------------- 502 (1255)
|+|+|++..|+.. .++|+|+||+|++||++.++||+||||||||++|.++..|+.|
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7899999999875 5799999999999999999999999999999999999999999
Q ss_pred ------cccCCCCCCCc--------ccccc------------------------CCCcCChHHHHHHHHHHHHccCCCEE
Q 000845 503 ------MDLKMLPFGDL--------TQIGE------------------------RGVNLSGGQKQRIQLARALYQDRDIY 544 (1255)
Q Consensus 503 ------~Di~~lp~gd~--------T~iGe------------------------~G~~LSGGQkqRIaLARAly~~~~il 544 (1255)
+|...|++..- ..+|. -...||||+||||+||||+..+|+++
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIARAiV~~P~vL 159 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQLSGGEQQRVAIARAIVNQPAVL 159 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccccCchHHHHHHHHHHHccCCCeE
Confidence 34444443210 11221 24789999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCccccC-CEEEEEeCCEEEEec
Q 000845 545 LLDDPFSALDAKTAKFLFTEYVMGA-LSKKTVLLVTHQVDFLPAF-DSILLISGGEIIQAA 603 (1255)
Q Consensus 545 LLDdp~SaLD~~~~~~i~~~~i~~~-l~~kTvIlvTH~l~~l~~a-D~Iivl~~G~i~~~G 603 (1255)
|-||||-.|||..+..|+ +++..+ ..|.||+++||+.+.+... -+++.+++|+++...
T Consensus 160 lADEPTGNLDp~~s~~im-~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 160 LADEPTGNLDPDLSWEIM-RLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred eecCCCCCCChHHHHHHH-HHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999886 556543 4699999999999999877 789999999998653
No 425
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=99.97 E-value=3.4e-30 Score=307.33 Aligned_cols=213 Identities=28% Similarity=0.413 Sum_probs=161.8
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccE
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLG 1082 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~ 1082 (1255)
.|.++|++++|+ ..++|+|+||++.+|++||||||||+|||||+++|.|..+|++|+|.+++. -+++
T Consensus 3 ~i~~~~ls~~~g--~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v~ 69 (530)
T COG0488 3 MITLENLSLAYG--DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRVG 69 (530)
T ss_pred eEEEeeeEEeeC--CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceEE
Confidence 488999999993 456999999999999999999999999999999999999999999998752 2699
Q ss_pred EEccCCccCCC-chhhhcccCCC-CC--hHHHHhccC------------chhHHHhcc---HHHHHHhhhcCc-----cc
Q 000845 1083 IIPQDPTLFSG-SVRYNLDPLSQ-FT--DQEIWEVTI------------PSQVLEKCQ---LREVIQEKKEGL-----DS 1138 (1255)
Q Consensus 1083 ~vpQdp~Lf~g-TIr~Nl~~~~~-~s--d~ei~~~~~------------~~~al~~~~---l~~~i~~lp~gl-----dt 1138 (1255)
|++|+|.+.++ |+++.+..... .. ..+..+... .....+..+ +..-+...-.|| ++
T Consensus 70 ~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~~~ 149 (530)
T COG0488 70 YLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDEDR 149 (530)
T ss_pred EeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcccC
Confidence 99999999976 99888753211 00 011110000 000000000 011111111222 34
Q ss_pred hhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEE
Q 000845 1139 LVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSM 1217 (1255)
Q Consensus 1139 ~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl 1217 (1255)
++ .+||||||.|++|||||+.+|+||+|||||++||.++-+-+.+-|.+ +++ |+|+|||+-+++.. |++|+-+
T Consensus 150 ~~----~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~-~~g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 150 PV----SSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKR-YPG-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred ch----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh-CCC-cEEEEeCCHHHHHHHhhheEEe
Confidence 44 47999999999999999999999999999999999999999999985 466 99999999999988 9999999
Q ss_pred eCCEEEEE-cChhHHhhc
Q 000845 1218 SDGKLVEY-DEPKKLLRR 1234 (1255)
Q Consensus 1218 ~~G~ive~-G~~~eLl~~ 1234 (1255)
+.|++..+ |.++.-++.
T Consensus 224 d~g~l~~y~Gny~~~~~~ 241 (530)
T COG0488 224 DRGKLTPYKGNYSSYLEQ 241 (530)
T ss_pred cCCceeEecCCHHHHHHH
Confidence 99988765 566655543
No 426
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.1e-30 Score=281.19 Aligned_cols=164 Identities=29% Similarity=0.456 Sum_probs=136.7
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccC------CC---
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLK------ML--- 508 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~------~l--- 508 (1255)
.++++|++|+|+.+ .++|+|+|+++++|+.++|+|+||||||||++.+.|.++|..|. ++. .+
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 47899999999876 58999999999999999999999999999999999999999982 111 00
Q ss_pred -----CCCCc---------------------------------ccc------ccCCCcCChHHHHHHHHHHHHccCCCEE
Q 000845 509 -----PFGDL---------------------------------TQI------GERGVNLSGGQKQRIQLARALYQDRDIY 544 (1255)
Q Consensus 509 -----p~gd~---------------------------------T~i------Ge~G~~LSGGQkqRIaLARAly~~~~il 544 (1255)
.+.|. ..+ .....+||||||||||||.+|..+|+++
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~P~il 160 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMGPEIL 160 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHhhHHHHcCCCEE
Confidence 00000 011 1346799999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHhhhc-C-CcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChhHHhh
Q 000845 545 LLDDPFSALDAKTAKFLFTEYVMGAL-S-KKTVLLVTHQVDFLPA-FDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 545 LLDdp~SaLD~~~~~~i~~~~i~~~l-~-~kTvIlvTH~l~~l~~-aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
+||||||+||+...+.+.+ .+..+. . ++|+|++||+++.+.. ||++++|++|+++.+|+++++..
T Consensus 161 iLDEPta~LD~~~~~~l~~-~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 161 LLDEPTAGLDPKGRRELLE-LLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred EEcCCCCCCCHHHHHHHHH-HHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 9999999999999988865 444443 3 6899999999998765 99999999999999999887764
No 427
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=3.3e-30 Score=285.01 Aligned_cols=168 Identities=30% Similarity=0.529 Sum_probs=140.9
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cc--------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MD-------------- 504 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~D-------------- 504 (1255)
++++|++++|+.. +++|+|+||+|++|++++|+||||||||||+++|.|..+|.+| .+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 3688999999632 4699999999999999999999999999999999999999888 00
Q ss_pred -----------------------------------------cCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCE
Q 000845 505 -----------------------------------------LKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDI 543 (1255)
Q Consensus 505 -----------------------------------------i~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~i 543 (1255)
+..+|.|..|.++.+..+||||||||++||||++.+|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 012233444445556789999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhcchHH
Q 000845 544 YLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVTSQEF 615 (1255)
Q Consensus 544 lLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~~~~~ 615 (1255)
+||||||++||+.+.+.+. +++..+.+++|+|++||+++.+..||++++|++|++++.|+.+++......+
T Consensus 159 lllDEP~~~LD~~~~~~l~-~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~ 229 (236)
T cd03253 159 LLLDEATSALDTHTEREIQ-AALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLY 229 (236)
T ss_pred EEEeCCcccCCHHHHHHHH-HHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHH
Confidence 9999999999999987775 5555554589999999999998889999999999999999988876544333
No 428
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=99.97 E-value=4.1e-30 Score=281.30 Aligned_cols=159 Identities=34% Similarity=0.519 Sum_probs=138.0
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc--------------------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM-------------------- 503 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~-------------------- 503 (1255)
.++++|++++|+... +++|+|+||++++|++++|+|+||||||||+++|.|+++|.+|.
T Consensus 2 ~l~~~~l~~~~~~~~-~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRPNL-PPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCCCC-cccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 478999999997432 47999999999999999999999999999999999999998880
Q ss_pred ----------------------------------------ccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCE
Q 000845 504 ----------------------------------------DLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDI 543 (1255)
Q Consensus 504 ----------------------------------------Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~i 543 (1255)
.+..+|.|..|..+..+.+||||||||++||||++.+|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 0112345556666778899999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecC
Q 000845 544 YLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAAT 604 (1255)
Q Consensus 544 lLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~ 604 (1255)
+||||||++||+.+.+.+. +++..+.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~-~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQ-KTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHH-HHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 9999999999999987665 55655556799999999999998899999999999988765
No 429
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=99.97 E-value=2.6e-30 Score=345.56 Aligned_cols=205 Identities=19% Similarity=0.223 Sum_probs=166.7
Q ss_pred ceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccC----CCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCC-
Q 000845 1019 LVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLV----EPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSG- 1093 (1255)
Q Consensus 1019 ~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~----~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~g- 1093 (1255)
.+|+|+|++++|||.+||+||||||||||+++|.|.. .|.+|+|.+||.++.+.. ...|+.++||+|++.+|+.
T Consensus 75 ~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~-~~~r~~i~yv~Q~d~~~~~l 153 (1394)
T TIGR00956 75 DILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIK-KHYRGDVVYNAETDVHFPHL 153 (1394)
T ss_pred eeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHH-hhcCceeEEeccccccCCCC
Confidence 5899999999999999999999999999999999986 478999999999986554 3467789999999988875
Q ss_pred chhhhcccCC----------CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcC-CCCCCChhHHHHHHHHHHHc
Q 000845 1094 SVRYNLDPLS----------QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQ-DGANWSMGQRQLIGLGRVVL 1162 (1255)
Q Consensus 1094 TIr~Nl~~~~----------~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e-~G~~LSgGQrQrl~lARAlL 1162 (1255)
|++|||.+.. ..+.++..+. ....+++..+|. +-.||.+|+ ....||||||||++|||||+
T Consensus 154 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~lgL~-------~~~~t~vg~~~~~~LSGGerkRvsIA~aL~ 225 (1394)
T TIGR00956 154 TVGETLDFAARCKTPQNRPDGVSREEYAKH-IADVYMATYGLS-------HTRNTKVGNDFVRGVSGGERKRVSIAEASL 225 (1394)
T ss_pred CHHHHHHHHHHhCCCCCCCCCCCHHHHHHH-HHHHHHHHcCcc-------cccCceeCCCcCCCCCcccchHHHHHHHHH
Confidence 9999997421 1222322110 001134444443 235677764 34579999999999999999
Q ss_pred cCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCc-hhhhh-cCEEEEEeCCEEEEEcChhHHh
Q 000845 1163 RRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRI-ATVMD-CNMVLSMSDGKLVEYDEPKKLL 1232 (1255)
Q Consensus 1163 ~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl-~ti~~-~DrI~vl~~G~ive~G~~~eLl 1232 (1255)
.+|+|++|||||++||+.+...+.+.|++..+ ++|+|+++|++ +.+.+ +|+|++|++|+++.+|+++++.
T Consensus 226 ~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~ 299 (1394)
T TIGR00956 226 GGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAK 299 (1394)
T ss_pred hCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHH
Confidence 99999999999999999999999999998753 78999999997 45654 9999999999999999998873
No 430
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-29 Score=290.06 Aligned_cols=170 Identities=24% Similarity=0.372 Sum_probs=139.5
Q ss_pred CcceEEEEeeEEEecCCC--CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCC-----
Q 000845 441 LEHSIFIKSADLSWEADL--LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKM----- 507 (1255)
Q Consensus 441 ~~~~i~~~~~~f~w~~~~--~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~----- 507 (1255)
.+..++++|++|+|+... ..++|+|+||+|++||+++|+|+||||||||+++|.|.++|.+| .++..
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 445799999999997432 24699999999999999999999999999999999999999888 11110
Q ss_pred -----------------------CCCC-C-----cc-----------------------------------ccccCCCcC
Q 000845 508 -----------------------LPFG-D-----LT-----------------------------------QIGERGVNL 523 (1255)
Q Consensus 508 -----------------------lp~g-d-----~T-----------------------------------~iGe~G~~L 523 (1255)
.++. + .| ..+..+.+|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~L 177 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFGL 177 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcccC
Confidence 0000 0 00 123456789
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcc-ccCCEEEEEeCCEEEE
Q 000845 524 SGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGA-LSKKTVLLVTHQVDFL-PAFDSILLISGGEIIQ 601 (1255)
Q Consensus 524 SGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~-l~~kTvIlvTH~l~~l-~~aD~Iivl~~G~i~~ 601 (1255)
|||||||++||||+..+|+++|||||||+||+.+.+.+. +++..+ .+++|+|+|||+++.+ ..||+|++|++|++++
T Consensus 178 SgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~-~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~~ 256 (320)
T PRK13631 178 SGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMM-QLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKILK 256 (320)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHH-HHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999988776 455443 3589999999999977 5699999999999999
Q ss_pred ecChhHHhhc
Q 000845 602 AATYDHLLVT 611 (1255)
Q Consensus 602 ~G~~~el~~~ 611 (1255)
.|+++++...
T Consensus 257 ~g~~~~~~~~ 266 (320)
T PRK13631 257 TGTPYEIFTD 266 (320)
T ss_pred eCCHHHHhcC
Confidence 9999988654
No 431
>PRK13409 putative ATPase RIL; Provisional
Probab=99.97 E-value=1.2e-30 Score=320.65 Aligned_cols=192 Identities=23% Similarity=0.275 Sum_probs=155.5
Q ss_pred EEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEE-----------EcCEeCCCCChHH
Q 000845 1008 DLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKII-----------IDGLDITTIGLYD 1076 (1255)
Q Consensus 1008 nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~-----------idG~di~~i~~~~ 1076 (1255)
+++.+|.++ ..+|++++ .+++||++||+||||||||||+++|.|+++|++|+|. ++|.|+.++....
T Consensus 78 ~~~~~yg~~-~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~~ 155 (590)
T PRK13409 78 EPVHRYGVN-GFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKKL 155 (590)
T ss_pred CceEEecCC-ceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHHH
Confidence 488999643 35899999 9999999999999999999999999999999999998 9999886543211
Q ss_pred --hhcc----cEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChh
Q 000845 1077 --LRSN----LGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMG 1150 (1255)
Q Consensus 1077 --lR~~----i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1150 (1255)
.+.+ +.+++|.|.+|.+|+++|+.... ..+++.+ +++..++.+. +|..+ .+||||
T Consensus 156 ~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~~--~~~~~~~------~l~~l~l~~~-------~~~~~----~~LSgG 216 (590)
T PRK13409 156 YNGEIKVVHKPQYVDLIPKVFKGKVRELLKKVD--ERGKLDE------VVERLGLENI-------LDRDI----SELSGG 216 (590)
T ss_pred hccCcceeecccchhhhhhhhcchHHHHHHhhh--HHHHHHH------HHHHcCCchh-------hcCCh----hhCCHH
Confidence 1123 44555677788899999996321 1223333 6666666433 23333 479999
Q ss_pred HHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cCEEEEEeCC
Q 000845 1151 QRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CNMVLSMSDG 1220 (1255)
Q Consensus 1151 QrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G 1220 (1255)
||||++||||++++|++|+||||||+||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|
T Consensus 217 e~qrv~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~ 287 (590)
T PRK13409 217 ELQRVAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGE 287 (590)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999987568999999999999976 8999999873
No 432
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=99.97 E-value=4.8e-30 Score=265.45 Aligned_cols=152 Identities=25% Similarity=0.402 Sum_probs=125.2
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCCCCCC--cccc
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKMLPFGD--LTQI 516 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~lp~gd--~T~i 516 (1255)
++++|++++|+. +++++|+||++++||+++|+|+||||||||+++|.|+++|.+| .++...+..+ ...+
T Consensus 1 l~~~~l~~~~~~---~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i 77 (163)
T cd03216 1 LELRGITKRFGG---VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGI 77 (163)
T ss_pred CEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCe
Confidence 468999999964 3799999999999999999999999999999999999999998 2333322111 0112
Q ss_pred ccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCccc-cCCEEEEE
Q 000845 517 GERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGA-LSKKTVLLVTHQVDFLP-AFDSILLI 594 (1255)
Q Consensus 517 Ge~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~-l~~kTvIlvTH~l~~l~-~aD~Iivl 594 (1255)
|-- ..||||||||++||||++++|+++||||||++||+.+.+.+. +++..+ .+++|+|++||+++.+. .||++++|
T Consensus 78 ~~~-~qLS~G~~qrl~laral~~~p~illlDEP~~~LD~~~~~~l~-~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l 155 (163)
T cd03216 78 AMV-YQLSVGERQMVEIARALARNARLLILDEPTAALTPAEVERLF-KVIRRLRAQGVAVIFISHRLDEVFEIADRVTVL 155 (163)
T ss_pred EEE-EecCHHHHHHHHHHHHHhcCCCEEEEECCCcCCCHHHHHHHH-HHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 211 129999999999999999999999999999999999988776 455444 35899999999999876 58999999
Q ss_pred eCCEEEE
Q 000845 595 SGGEIIQ 601 (1255)
Q Consensus 595 ~~G~i~~ 601 (1255)
++|++++
T Consensus 156 ~~g~i~~ 162 (163)
T cd03216 156 RDGRVVG 162 (163)
T ss_pred ECCEEEe
Confidence 9999875
No 433
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=99.97 E-value=8e-30 Score=268.54 Aligned_cols=157 Identities=36% Similarity=0.570 Sum_probs=129.6
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccC-----------C
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLK-----------M 507 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~-----------~ 507 (1255)
++++|++++|+... .++++|+||++++||+++|+|+||||||||+++|.|.++|.+|. ++. .
T Consensus 1 i~~~~~~~~~~~~~-~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQE-QQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCC-ccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEE
Confidence 46889999997532 37999999999999999999999999999999999999999982 111 1
Q ss_pred CCCCC---ccccccC-CCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCC
Q 000845 508 LPFGD---LTQIGER-GVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVD 583 (1255)
Q Consensus 508 lp~gd---~T~iGe~-G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~ 583 (1255)
.++.. ...+.|+ ..+||||||||++||||++.+|+++||||||++||+.+.+.++ +++..+.+++|+|++||+++
T Consensus 80 ~~q~~~~~~~tv~~~i~~~LS~G~~qrv~laral~~~p~~lllDEP~~~LD~~~~~~l~-~~l~~~~~~~tii~~sh~~~ 158 (178)
T cd03247 80 LNQRPYLFDTTLRNNLGRRFSGGERQRLALARILLQDAPIVLLDEPTVGLDPITERQLL-SLIFEVLKDKTLIWITHHLT 158 (178)
T ss_pred EccCCeeecccHHHhhcccCCHHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHH-HHHHHHcCCCEEEEEecCHH
Confidence 11110 0112222 6789999999999999999999999999999999999987776 45555556899999999999
Q ss_pred ccccCCEEEEEeCCEEEEec
Q 000845 584 FLPAFDSILLISGGEIIQAA 603 (1255)
Q Consensus 584 ~l~~aD~Iivl~~G~i~~~G 603 (1255)
.++.||++++|++|++++.|
T Consensus 159 ~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 159 GIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred HHHhCCEEEEEECCEEEecC
Confidence 99889999999999998754
No 434
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=99.97 E-value=6e-30 Score=276.07 Aligned_cols=154 Identities=54% Similarity=0.903 Sum_probs=134.0
Q ss_pred EEEEeeEEEecCCCC--CCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC--------------------
Q 000845 445 IFIKSADLSWEADLL--NPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG-------------------- 502 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~--~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G-------------------- 502 (1255)
++++|++++|+.... +++|+|+||+|++|++++|+||+|||||||+++|+|.++|.+|
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~~ 80 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNG 80 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhccC
Confidence 468999999975321 3699999999999999999999999999999999999999988
Q ss_pred ---------------------------cccCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCH
Q 000845 503 ---------------------------MDLKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDA 555 (1255)
Q Consensus 503 ---------------------------~Di~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~ 555 (1255)
..+..+|.|.+|.+++++.+||||||||++||||++++|+++||||||++||+
T Consensus 81 t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~ 160 (204)
T cd03250 81 TIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDA 160 (204)
T ss_pred cHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCH
Confidence 01233455667777888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCE
Q 000845 556 KTAKFLFTEYVMGAL-SKKTVLLVTHQVDFLPAFDSILLISGGE 598 (1255)
Q Consensus 556 ~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l~~aD~Iivl~~G~ 598 (1255)
+..+.+++.++.... +++|+|++||+++.+..||++++|++|+
T Consensus 161 ~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 161 HVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 998888876765443 4799999999999988899999999984
No 435
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=9.2e-30 Score=294.53 Aligned_cols=165 Identities=28% Similarity=0.414 Sum_probs=135.9
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC-----------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK----------- 506 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~----------- 506 (1255)
.++++|++++|+. +.++|+|+||++++||+++|+|||||||||||++|.|..+|.+| .++.
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 4789999999942 24799999999999999999999999999999999999999988 1211
Q ss_pred ------CCCC--------------C------------------CccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeC
Q 000845 507 ------MLPF--------------G------------------DLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDD 548 (1255)
Q Consensus 507 ------~lp~--------------g------------------d~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDd 548 (1255)
.+|+ + -.........+|||||||||+||||++.+|+++||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLDE 160 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFDE 160 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 1111 0 0001123457899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 549 PFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFL-PAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 549 p~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l-~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
|||+||+.+.+.+.+. +..+. .+.|+|+|||+++.+ ..||+|++|++|++++.|+++++...
T Consensus 161 P~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 161 PLSNLDAKLRVQMRLE-IQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred CcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999888654 44443 389999999999876 56899999999999999999988643
No 436
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=99.96 E-value=3.1e-26 Score=270.25 Aligned_cols=401 Identities=20% Similarity=0.265 Sum_probs=265.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcc-----CChhHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHH
Q 000845 188 WFFQSRLTGLKIRSSLCAAISSKQLRLSNAAKMM-----HTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVV 261 (1255)
Q Consensus 188 ~~~~~~~~~~~~r~~l~~~iy~K~l~l~~~~~~~-----~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~v~~~l 261 (1255)
..|...++..+.|..|+.-+..|=|.-....+-. ...-..-..++.|+..+.+... ....+..+.+.++.-..+
T Consensus 106 ~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~i 185 (604)
T COG4178 106 QTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGI 185 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778999999999999999988765432211 1112345688889888776543 333444444555555556
Q ss_pred HHHHHhHHH---------HHH--HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhhhHHHHHhCch
Q 000845 262 VYYSVGLAT---------IAT--LIVMILTVLGNSPLAKLQHKY-----QETFMTAQNKRLKAITEVLVNMKVLKLYAWD 325 (1255)
Q Consensus 262 L~~~lG~~~---------l~g--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~Rv~~~~e~l~~Ik~IK~~~wE 325 (1255)
||..-|..+ +.| +.++++.+++..+++-+.++- .++....-|-|-.++ .+..+...|-+|+-|
T Consensus 186 Lw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lv-rv~enaE~IAly~GE 264 (604)
T COG4178 186 LWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLV-RVRENAEAIALYRGE 264 (604)
T ss_pred HHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHH-HHHhhHHHHHHhcCc
Confidence 664444211 111 112223334444444333332 333344455555544 577788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 000845 326 SYFKNVIEKLRSEEYGWLKVLQ----LQKGYYMVLFWSSPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLL 401 (1255)
Q Consensus 326 ~~~~~~i~~~R~~El~~~~~~~----~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~l 401 (1255)
+...+++.+.=..=++..++.. .+..+.....++++ +++.. ..+-.+..+.++-+...++-..|+.+...++.+
T Consensus 265 ~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~-v~P~l-i~ap~~f~g~i~~G~lmqa~~aF~~v~sslswf 342 (604)
T COG4178 265 KVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSV-VLPIL-IAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWF 342 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHH-HHHHH-hccHhhhcCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 9888777653332222222211 11112222222222 11111 111124578899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC------CCCcchh-ccc-ccccCcceEEEEeeEEEecCCCCCCccccceeeeeCC
Q 000845 402 PDVFGAFIEAKVSLDRIANFLEAPE------LQNSDMQ-QVC-SRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPA 473 (1255)
Q Consensus 402 p~~i~~~~~a~~s~~Ri~~fL~~~e------~~~~~~~-~~~-~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G 473 (1255)
-..++.+.+=+++..|+.+|-..=+ ....... ... ... .+..|.++|++..-|.. .+.++++|+++++|
T Consensus 343 i~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~nl~l~~p~~--~~ll~~l~~~v~~G 419 (604)
T COG4178 343 IDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDN-ADHGITLENLSLRTPDG--QTLLSELNFEVRPG 419 (604)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccccccccccc-ccceeEEeeeeEECCCC--CeeeccceeeeCCC
Confidence 9999999999999999999985311 1110000 000 011 15789999999998764 38999999999999
Q ss_pred cEEEEEccCCCCHHHHHHHHhccCCCCCCc-----c--c------CCCCCC-----------C-----c------ccc--
Q 000845 474 EKFAICGEVGAGKSTLLAAILGELPRLQGM-----D--L------KMLPFG-----------D-----L------TQI-- 516 (1255)
Q Consensus 474 ~l~~IvG~~GsGKSTLL~~llGe~~~~~G~-----D--i------~~lp~g-----------d-----~------T~i-- 516 (1255)
+-+.|.|++|||||||+++|.|..|.-+|. | + -.+|.| . . .++
T Consensus 420 ~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL 499 (604)
T COG4178 420 ERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGL 499 (604)
T ss_pred CEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCc
Confidence 999999999999999999999999987771 1 1 112222 1 1 011
Q ss_pred ----------ccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc
Q 000845 517 ----------GERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLP 586 (1255)
Q Consensus 517 ----------Ge~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~ 586 (1255)
..-...|||||||||++||.++.+|++++|||+|||||+.++..+++ .+++.+.+.|+|-|.|+.....
T Consensus 500 ~~L~~rl~~~~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q-~l~~~lp~~tvISV~Hr~tl~~ 578 (604)
T COG4178 500 GDLAERLDEEDRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQ-LLKEELPDATVISVGHRPTLWN 578 (604)
T ss_pred HHHHHHHhccCcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHH-HHHhhCCCCEEEEeccchhhHH
Confidence 12246799999999999999999999999999999999999988864 5567778999999999998888
Q ss_pred cCCEEEEEe
Q 000845 587 AFDSILLIS 595 (1255)
Q Consensus 587 ~aD~Iivl~ 595 (1255)
..++.+.++
T Consensus 579 ~h~~~l~l~ 587 (604)
T COG4178 579 FHSRQLELL 587 (604)
T ss_pred HHhhheeec
Confidence 777766664
No 437
>KOG0064 consensus Peroxisomal long-chain acyl-CoA transporter, ABC superfamily [Lipid transport and metabolism]
Probab=99.96 E-value=3.7e-26 Score=255.45 Aligned_cols=469 Identities=16% Similarity=0.194 Sum_probs=306.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-cccchh---HHHHhchhhHhhhHhHHHH
Q 000845 726 VIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDS-TPVGRI---LSRVSSDLSIIDLDLSIKS 801 (1255)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~vl~~p~~~f~~-~~~G~i---l~r~s~D~~~id~~l~~~~ 801 (1255)
++-.+++++-..+.+..-.++..+.++..-.++-...++..+... .||.- +--|++ -|+++.|+....+......
T Consensus 160 LlkW~liaiPAtFvNS~Iryle~klaLafrtrL~~h~y~~Y~snq-TyY~Vsn~d~~i~n~D~sLTeDI~~Fs~svahLy 238 (728)
T KOG0064|consen 160 LLKWFLIAIPASFVNSAIRYLESKLALAFRTRLTRHAYDMYLSNQ-TFYKVSNLDSVIENADNSLTEDIAKFSDSVAHLY 238 (728)
T ss_pred HHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-ceEEEecccchhcCccchhHHHHHHHHHHHHHHH
Confidence 444556666666666666777777777777777777777777666 66654 333443 4678999988777666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhchHHHHH
Q 000845 802 TIAVGTTMAVISTFVVLGALTWQVLL----VIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRA 877 (1255)
Q Consensus 802 ~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIra 877 (1255)
..+.--++-++..-+.+.-.+-.... .+...+.+...+.+.+.+..-++...+..+++.+...-+..+.+.+.|-.
T Consensus 239 snLtKP~lDl~l~s~~L~~s~~s~g~~~~~~~~lvv~lTa~iLr~~sP~Fg~Lv~eeA~r~g~lr~~Hs~ii~NsEEIAf 318 (728)
T KOG0064|consen 239 SNLTKPVLDLILISFTLLDSATSVGAAGITLAGLVVYLTAFILRAVSPKFGKLVAEEAARKGYLRYLHSNIITNSEEIAF 318 (728)
T ss_pred HhhhhHHHHHHHHHHHHHhhhccccccchhhhhhHHHHHHHHHHHhCCchhhHHHHHHhhccHHHHHHHHHhccHHHHHh
Confidence 65555555444333222211111111 11122223334556666667777778888888899999999999999999
Q ss_pred hCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H----hccCcc---cHHH-----H
Q 000845 878 FQNEERFFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALCTT----L----LHKGHK---GAGY-----T 941 (1255)
Q Consensus 878 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~----~----~~~~~~---~~~~-----~ 941 (1255)
|+..+...++.++..+..............|....-+++.--+-.....+.+ + ...++. ..+. .
T Consensus 319 y~GhkvE~~ql~~sy~~L~~qm~li~k~r~~YiMleqF~mKYvWsg~GlvmvsiPI~~~t~~s~~~~~~~e~~~srt~~f 398 (728)
T KOG0064|consen 319 YGGHKVELTQVDESYNRLVEQMNLIFKVRLWYIMLEQFVMKYTWSGTGLVMVSIPILTSTLASEGTLQLSEEGNSRTKEF 398 (728)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeeeecccCCCCcccccccchhHHHHH
Confidence 9999988888777776665555555556666654444332211111111000 0 001110 0111 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcC-----------C--CCCcccc-----cCCCCCCC---CCC
Q 000845 942 GMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRI-----------P--SEAPELV-----QKNSPAPD---WPP 1000 (1255)
Q Consensus 942 g~~l~~~~~~~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~-----------~--~e~~~~~-----~~~~~~~~---~p~ 1000 (1255)
..+=....+....+.-++....++.+...--.|+.+.++. + +|..... .+..+.+. -..
T Consensus 399 ~t~r~LL~saAdAieRlMssyKeItqLaGyt~Rv~~mf~v~~dv~~g~~~k~~v~e~~~~~~~~e~r~s~~l~~~~~i~~ 478 (728)
T KOG0064|consen 399 ITNRRLLLSAADAIERLMSSYKEITQLAGYTNRVFTMFSVLHDVHKGNYNKTAVPEILSSRTIDESRNSNPLPTTDAIRN 478 (728)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcccccccccCchhhccCccccccCCcCCccchhhc
Confidence 1111112233344444555555555555555565543310 0 0100000 00000000 001
Q ss_pred CceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcc
Q 000845 1001 TGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSN 1080 (1255)
Q Consensus 1001 ~g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~ 1080 (1255)
...|.++||-.--|. ...+...+||.|+||-++-|.||||||||||++.|.|+.+...|...+-- +.+
T Consensus 479 ~~gI~lenIpvItP~-~~vvv~~Ltf~i~~G~hLLItGPNGCGKSSLfRILggLWPvy~g~L~~P~-----------~~~ 546 (728)
T KOG0064|consen 479 FNGIILENIPVITPA-GDVLVPKLTFQIEPGMHLLITGPNGCGKSSLFRILGGLWPVYNGLLSIPR-----------PNN 546 (728)
T ss_pred ccceEEecCceeccC-cceeecceeEEecCCceEEEECCCCccHHHHHHHHhccCcccCCeeecCC-----------Ccc
Confidence 235899999887654 45589999999999999999999999999999999999999999876531 456
Q ss_pred cEEEccCCccCCCchhhhccc-C-------CCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1081 LGIIPQDPTLFSGSVRYNLDP-L-------SQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1081 i~~vpQdp~Lf~gTIr~Nl~~-~-------~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
|-||||.|+.=-||+||.+-+ - ..++|.|+.. .|+.++|+..+ +...|+|.... --.-||||+|
T Consensus 547 mFYIPQRPYms~gtlRDQIIYPdS~e~~~~kg~~d~dL~~------iL~~v~L~~i~-qr~~g~da~~d-Wkd~LsgGek 618 (728)
T KOG0064|consen 547 IFYIPQRPYMSGGTLRDQIIYPDSSEQMKRKGYTDQDLEA------ILDIVHLEHIL-QREGGWDAVRD-WKDVLSGGEK 618 (728)
T ss_pred eEeccCCCccCcCcccceeecCCcHHHHHhcCCCHHHHHH------HHHHhhHHHHH-HhccChhhhcc-HHhhccchHH
Confidence 999999999989999999842 1 2478889887 89999997544 55677887653 3357999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhhcCEEEEE
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSM 1217 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl 1217 (1255)
||+++||.+.++|+--+|||+||++-.+.|..|.++.+. .|-+.|.|+||++....-...+-.
T Consensus 619 QR~~mARm~yHrPkyalLDEcTsAvsidvE~~i~~~ak~--~gi~llsithrpslwk~h~~ll~~ 681 (728)
T KOG0064|consen 619 QRMGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKD--AGISLLSITHRPSLWKYHTHLLEF 681 (728)
T ss_pred HHHHHHHHHhcCcchhhhhhhhcccccchHHHHHHHHHh--cCceEEEeecCccHHHHHHHHHhc
Confidence 999999999999999999999999999999999999987 588999999999987654444443
No 438
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=3.2e-29 Score=260.53 Aligned_cols=193 Identities=24% Similarity=0.380 Sum_probs=157.4
Q ss_pred CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCCchhh
Q 000845 1018 PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRY 1097 (1255)
Q Consensus 1018 ~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~ 1097 (1255)
.++|+||||++++||++||||+||||||||+++|.|.|+|++|+|.++|.--.-+.+ ..|+-|| -|-||
T Consensus 40 ~~aL~disf~i~~Ge~vGiiG~NGaGKSTLlkliaGi~~Pt~G~v~v~G~v~~li~l-----g~Gf~pe------lTGre 108 (249)
T COG1134 40 FWALKDISFEIYKGERVGIIGHNGAGKSTLLKLIAGIYKPTSGKVKVTGKVAPLIEL-----GAGFDPE------LTGRE 108 (249)
T ss_pred EEEecCceEEEeCCCEEEEECCCCCcHHHHHHHHhCccCCCCceEEEcceEehhhhc-----ccCCCcc------cchHH
Confidence 369999999999999999999999999999999999999999999999953222111 1233332 48899
Q ss_pred hcccCC---CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCC
Q 000845 1098 NLDPLS---QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEAT 1174 (1255)
Q Consensus 1098 Nl~~~~---~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~T 1174 (1255)
|+-+.+ -.+.+|+.+ ...+..+=++|.+|+ |.|| .+.|-|.+-||++|-|.--+|+|||+||..
T Consensus 109 Ni~l~~~~~G~~~~ei~~--~~~eIieFaELG~fi-------~~Pv----ktYSSGM~aRLaFsia~~~~pdILllDEvl 175 (249)
T COG1134 109 NIYLRGLILGLTRKEIDE--KVDEIIEFAELGDFI-------DQPV----KTYSSGMYARLAFSVATHVEPDILLLDEVL 175 (249)
T ss_pred HHHHHHHHhCccHHHHHH--HHHHHHHHHHHHHHh-------hCch----hhccHHHHHHHHHhhhhhcCCCEEEEehhh
Confidence 986433 345666544 112355566666665 4444 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHH-cCCcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhHHhhc
Q 000845 1175 ASIDNATDSILQNTIRRE-FANCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKKLLRR 1234 (1255)
Q Consensus 1175 S~LD~~te~~i~~~l~~~-~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1234 (1255)
|.-|+.=.++=++.+++. .+++|+|+|+|+++.|++ |||+++|++|+|...|+|++..+.
T Consensus 176 avGD~~F~~K~~~rl~e~~~~~~tiv~VSHd~~~I~~~Cd~~i~l~~G~i~~~G~~~~vi~~ 237 (249)
T COG1134 176 AVGDAAFQEKCLERLNELVEKNKTIVLVSHDLGAIKQYCDRAIWLEHGQIRMEGSPEEVIPA 237 (249)
T ss_pred hcCCHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhcCeeEEEeCCEEEEcCCHHHHHHH
Confidence 999999888877777776 578999999999999987 999999999999999999999864
No 439
>COG4136 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.96 E-value=1.8e-29 Score=238.25 Aligned_cols=192 Identities=23% Similarity=0.326 Sum_probs=157.1
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CCEEEEcCEeCCCCChHHhhc
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT---GGKIIIDGLDITTIGLYDLRS 1079 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~---~G~I~idG~di~~i~~~~lR~ 1079 (1255)
-..++||+.+-+ +...|.|+||+|.+||+|-|.||||||||||+.-+.|.+.++ +|++.+|++++..++.+ |+
T Consensus 2 ~l~l~nvsl~l~--g~cLLa~~n~Tia~GeivtlMGPSGcGKSTLls~~~G~La~~F~~~G~~~l~~~~l~~lPa~--qR 77 (213)
T COG4136 2 MLCLKNVSLRLP--GSCLLANVNFTIAKGEIVTLMGPSGCGKSTLLSWMIGALAGQFSCTGELWLNEQRLDMLPAA--QR 77 (213)
T ss_pred ceeeeeeeecCC--CceEEEeeeEEecCCcEEEEECCCCccHHHHHHHHHhhcccCcceeeEEEECCeeccccchh--hh
Confidence 467899998764 345899999999999999999999999999999999999874 89999999999998866 68
Q ss_pred ccEEEccCCccCCC-chhhhcccCC------CCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHH
Q 000845 1080 NLGIIPQDPTLFSG-SVRYNLDPLS------QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQR 1152 (1255)
Q Consensus 1080 ~i~~vpQdp~Lf~g-TIr~Nl~~~~------~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1152 (1255)
++|+++||+.||+- ++-+||.+.- +....... .||++.+|.++..+.|+ +||||||
T Consensus 78 q~GiLFQD~lLFphlsVg~Nl~fAlp~~~KG~aRr~~a~------aAL~~~gL~g~f~~dP~-----------tlSGGQr 140 (213)
T COG4136 78 QIGILFQDALLFPHLSVGQNLLFALPATLKGNARRNAAN------AALERSGLDGAFHQDPA-----------TLSGGQR 140 (213)
T ss_pred heeeeecccccccccccccceEEecCcccccHHHHhhHH------HHHHHhccchhhhcChh-----------hcCcchH
Confidence 99999999999986 9999996432 11122222 38889888888776664 6999999
Q ss_pred HHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCchhhhhcCEEE
Q 000845 1153 QLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIATVMDCNMVL 1215 (1255)
Q Consensus 1153 Qrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~ 1215 (1255)
-|++|-|+|+..|+.|+||||.|.||..-.....+-+-+.. .+--+|.|||++..+..-.||+
T Consensus 141 ARvaL~R~Lla~Pk~lLLDEPFS~LD~ALR~qfR~wVFs~~r~agiPtv~VTHD~~DvpagsrVi 205 (213)
T COG4136 141 ARVALLRALLAQPKALLLDEPFSRLDVALRDQFRQWVFSEVRAAGIPTVQVTHDLQDVPAGSRVI 205 (213)
T ss_pred HHHHHHHHHHhCcceeeeCCchhHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccccCCCCCeee
Confidence 99999999999999999999999999887776655544332 4678999999998776433433
No 440
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=99.96 E-value=1.5e-29 Score=276.54 Aligned_cols=158 Identities=39% Similarity=0.596 Sum_probs=131.9
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------c-------------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------D------------- 504 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------D------------- 504 (1255)
.++++|+++.|+.. ..++|+|+||++++|++++|+||||||||||+++|.|+.+|.+|. +
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 47899999999642 247999999999999999999999999999999999999988880 0
Q ss_pred ------------------------------------------cCCCCCCCccccccCCCcCChHHHHHHHHHHHHccCCC
Q 000845 505 ------------------------------------------LKMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQDRD 542 (1255)
Q Consensus 505 ------------------------------------------i~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ 542 (1255)
+..+|.|..|.+.....+||||||||++||||+..+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 01122233344444557999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEec
Q 000845 543 IYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAA 603 (1255)
Q Consensus 543 ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G 603 (1255)
++||||||++||+.+.+.+. +++..+.+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLK-ERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHH-HHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999987775 5565555568999999999988889999999999997654
No 441
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.7e-29 Score=291.26 Aligned_cols=164 Identities=27% Similarity=0.427 Sum_probs=136.7
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------ccc-----------
Q 000845 443 HSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDL----------- 505 (1255)
Q Consensus 443 ~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di----------- 505 (1255)
..++++|++++|.. .++|+|+||++++||+++|+|||||||||||++|.|+.+|.+| .++
T Consensus 5 ~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 81 (351)
T PRK11432 5 NFVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDIC 81 (351)
T ss_pred cEEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 36899999999963 4689999999999999999999999999999999999999988 111
Q ss_pred ------CCCCC--------------C---Cc---------------cccccCCCcCChHHHHHHHHHHHHccCCCEEEEe
Q 000845 506 ------KMLPF--------------G---DL---------------TQIGERGVNLSGGQKQRIQLARALYQDRDIYLLD 547 (1255)
Q Consensus 506 ------~~lp~--------------g---d~---------------T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLD 547 (1255)
..+|+ + .. ........+|||||||||+||||++.+|+++|||
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLLD 161 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKPKVLLFD 161 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEc
Confidence 11121 0 00 0112356899999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChhHHhh
Q 000845 548 DPFSALDAKTAKFLFTEYVMGALS--KKTVLLVTHQVDFL-PAFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 548 dp~SaLD~~~~~~i~~~~i~~~l~--~kTvIlvTH~l~~l-~~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
||||+||+.+.+.+.+ .+..+.+ ++|+|+|||+++.+ ..||+|++|++|++++.|+++++..
T Consensus 162 EP~s~LD~~~r~~l~~-~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~ 226 (351)
T PRK11432 162 EPLSNLDANLRRSMRE-KIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYR 226 (351)
T ss_pred CCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999988754 4555443 89999999999986 5689999999999999999988764
No 442
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.96 E-value=9.3e-30 Score=281.00 Aligned_cols=162 Identities=32% Similarity=0.431 Sum_probs=132.4
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCC-----------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKM----------- 507 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~----------- 507 (1255)
++++|++++|+. .++|+|+||++++|++++|+||||||||||+++|.|.++|.+| .++..
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 368899999963 4799999999999999999999999999999999999999888 11110
Q ss_pred ----CCCC-----Ccc-----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCE
Q 000845 508 ----LPFG-----DLT-----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDI 543 (1255)
Q Consensus 508 ----lp~g-----d~T-----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~i 543 (1255)
.|+. +.| .......+||||||||++||||+..+|++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~~p~l 157 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALALDPEL 157 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 0000 000 01123467999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 544 YLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 544 lLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
+||||||++||+.+.+.+. +.+..+. .++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 158 lllDEPt~~LD~~~~~~l~-~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 158 LLYDEPTAGLDPIASGVID-DLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred EEecCCcccCCHHHHHHHH-HHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 9999999999999987775 4555443 3899999999999876 589999999999999999888754
No 443
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.8e-29 Score=284.92 Aligned_cols=167 Identities=29% Similarity=0.360 Sum_probs=137.3
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC-----------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK----------- 506 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~----------- 506 (1255)
.++++|++++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|.++|.+| .++.
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48899999999743334699999999999999999999999999999999999999988 1110
Q ss_pred ---------CCCC--------------CC------------------ccccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 507 ---------MLPF--------------GD------------------LTQIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 507 ---------~lp~--------------gd------------------~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
.++. |. .........+||||||||++||||++.+|+++|
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLl 163 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMRPKIII 163 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 0000 00 001123457999999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
|||||++||+.+.+.++ +++..+. .|+|+|++||+++.+..||+|++|++|+++..|+.+++...
T Consensus 164 LDEPt~~LD~~~~~~l~-~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 164 LDEATSMLDPEGRLELI-KTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred EECCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999987665 5565543 38999999999998888999999999999999998887644
No 444
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=2.3e-29 Score=284.85 Aligned_cols=166 Identities=25% Similarity=0.354 Sum_probs=136.5
Q ss_pred eEEEEeeEEEecCCC--CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCC--------
Q 000845 444 SIFIKSADLSWEADL--LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKM-------- 507 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~--~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~-------- 507 (1255)
.++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|.+| .++..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 378999999997432 14799999999999999999999999999999999999999888 11110
Q ss_pred ------CCCC----------------------------------------Cc--cccccCCCcCChHHHHHHHHHHHHcc
Q 000845 508 ------LPFG----------------------------------------DL--TQIGERGVNLSGGQKQRIQLARALYQ 539 (1255)
Q Consensus 508 ------lp~g----------------------------------------d~--T~iGe~G~~LSGGQkqRIaLARAly~ 539 (1255)
.|+. -. +........||||||||++||||+..
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~ 161 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAM 161 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHc
Confidence 0000 00 11233467899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 540 DRDIYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 540 ~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
+|+++||||||++||+.+.+.++ +++..+. .|+|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 162 ~P~llllDEPt~gLD~~~~~~l~-~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 162 EPKILILDEPTAGLDPKGRDEIL-NKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred CCCEEEEECCccCCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999988775 5565543 3899999999999874 699999999999999999988754
No 445
>PLN03140 ABC transporter G family member; Provisional
Probab=99.96 E-value=6.1e-30 Score=340.00 Aligned_cols=212 Identities=18% Similarity=0.231 Sum_probs=164.6
Q ss_pred CceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CCEEEEcCEeCCCCChHHhhcccEEEccCCccCC-C
Q 000845 1018 PLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPT---GGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFS-G 1093 (1255)
Q Consensus 1018 ~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~---~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~-g 1093 (1255)
..+|+|+|+.|+|||.++|+||||||||||+++|.|.++|+ +|+|.+||.++.+.. .|+.++||+|++.+|. .
T Consensus 178 ~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~---~~~~i~yv~Q~d~~~~~l 254 (1470)
T PLN03140 178 LTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFV---PRKTSAYISQNDVHVGVM 254 (1470)
T ss_pred ceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhc---ccceeEEecccccCCCcC
Confidence 35899999999999999999999999999999999999998 999999999987654 3788999999988876 4
Q ss_pred chhhhcccCCC-------------CChHHHHhccC---c----hhHHHhcc------HHHHHHh--hhcCccchhcCC-C
Q 000845 1094 SVRYNLDPLSQ-------------FTDQEIWEVTI---P----SQVLEKCQ------LREVIQE--KKEGLDSLVVQD-G 1144 (1255)
Q Consensus 1094 TIr~Nl~~~~~-------------~sd~ei~~~~~---~----~~al~~~~------l~~~i~~--lp~gldt~v~e~-G 1144 (1255)
|++|||++... .+.+|-.+... . .++....+ .++.++. +.+-.||.||+. .
T Consensus 255 TV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~ 334 (1470)
T PLN03140 255 TVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMI 334 (1470)
T ss_pred cHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccc
Confidence 99999974211 01111000000 0 00000000 1122222 223346777653 3
Q ss_pred CCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeccCch-hh-hhcCEEEEEeCC
Q 000845 1145 ANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREF--ANCTVITVAHRIA-TV-MDCNMVLSMSDG 1220 (1255)
Q Consensus 1145 ~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~-ti-~~~DrI~vl~~G 1220 (1255)
..||||||||++|||+++.+|++|+|||||++||+.+...+.+.|++.. .++|+|+++|++. .+ .-||+|++|++|
T Consensus 335 rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G 414 (1470)
T PLN03140 335 RGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEG 414 (1470)
T ss_pred cCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCc
Confidence 5799999999999999999999999999999999999999999999874 3789999999973 44 459999999999
Q ss_pred EEEEEcChhHHh
Q 000845 1221 KLVEYDEPKKLL 1232 (1255)
Q Consensus 1221 ~ive~G~~~eLl 1232 (1255)
+++.+|++++++
T Consensus 415 ~ivy~G~~~~~~ 426 (1470)
T PLN03140 415 QIVYQGPRDHIL 426 (1470)
T ss_pred eEEEeCCHHHHH
Confidence 999999999886
No 446
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=99.96 E-value=1.3e-29 Score=291.96 Aligned_cols=152 Identities=31% Similarity=0.403 Sum_probs=127.8
Q ss_pred CCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCC-----------------------CCC
Q 000845 460 NPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKM-----------------------LPF 510 (1255)
Q Consensus 460 ~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~-----------------------lp~ 510 (1255)
+++|+|+||+|++||+++|+|||||||||||++|.|+++|++| .|+.. +|+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 4689999999999999999999999999999999999999988 22211 111
Q ss_pred C--------------------------------CccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHH
Q 000845 511 G--------------------------------DLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTA 558 (1255)
Q Consensus 511 g--------------------------------d~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~ 558 (1255)
. -....+....+|||||||||+||||++.+|+|+||||||||||+.++
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r 165 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIR 165 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHH
Confidence 0 00113456789999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhc-CCcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 559 KFLFTEYVMGAL-SKKTVLLVTHQVDFL-PAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 559 ~~i~~~~i~~~l-~~kTvIlvTH~l~~l-~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
+.+.+.+..-.. .++|+|+|||+++.+ ..||+|++|++|++++.|+++++...
T Consensus 166 ~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 166 DSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 988766554322 489999999999975 56899999999999999999998754
No 447
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=2.6e-29 Score=284.63 Aligned_cols=165 Identities=30% Similarity=0.424 Sum_probs=135.5
Q ss_pred EEEEeeEEEecCCCC--CCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC----------
Q 000845 445 IFIKSADLSWEADLL--NPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK---------- 506 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~--~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~---------- 506 (1255)
|+++|++|+|+.... +++|+|+||+|++||+++|+|+||||||||+++|.|.++|.+| .++.
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 689999999974321 3699999999999999999999999999999999999999888 1110
Q ss_pred ------CCCC----------------------CC-----------------c--cccccCCCcCChHHHHHHHHHHHHcc
Q 000845 507 ------MLPF----------------------GD-----------------L--TQIGERGVNLSGGQKQRIQLARALYQ 539 (1255)
Q Consensus 507 ------~lp~----------------------gd-----------------~--T~iGe~G~~LSGGQkqRIaLARAly~ 539 (1255)
..++ |. . ........+||||||||++||||++.
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL~~ 161 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGILAM 161 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHHHh
Confidence 0000 00 0 01123457899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 540 DRDIYLLDDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 540 ~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
+|+++||||||++||+.+.+.+. +++..+. +|+|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 162 ~p~illLDEPt~gLD~~~~~~l~-~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 162 EPEVLVLDEPTAGLDPKARIEMM-QLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred CCCEEEEECCccCCCHHHHHHHH-HHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 99999999999999999988776 4555543 4899999999999875 699999999999999999998764
No 448
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=99.96 E-value=2.2e-29 Score=286.89 Aligned_cols=164 Identities=29% Similarity=0.439 Sum_probs=136.2
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC----------
Q 000845 443 HSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK---------- 506 (1255)
Q Consensus 443 ~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~---------- 506 (1255)
..++++|++++|+. ..+|+|+||+|++||+++++||||||||||+++|+|.++|.+| .|+.
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 46899999999963 4699999999999999999999999999999999999999988 1110
Q ss_pred -CCCCC-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCEEEE
Q 000845 507 -MLPFG-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDIYLL 546 (1255)
Q Consensus 507 -~lp~g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~ilLL 546 (1255)
.+|+. +.| .......+||||||||++||||+..+|++++|
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~lllL 162 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVL 162 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 00000 000 01123468999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 547 DDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 547 Ddp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
||||++||+.+.+.+++ ++..+. +|+|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 163 DEPt~gLD~~~~~~l~~-~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 163 DEPTTGLDPQARHLMWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred eCCCcCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999888764 555543 4899999999999986 589999999999999999998853
No 449
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=99.96 E-value=2.3e-29 Score=277.84 Aligned_cols=162 Identities=27% Similarity=0.416 Sum_probs=135.2
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccCC-----------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLKM----------- 507 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~~----------- 507 (1255)
++++|++++|+. +++|+|+||+|++||+++|+||||||||||+++|.|.++|.+|. ++..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 578999999963 47999999999999999999999999999999999999998881 1110
Q ss_pred CCC---------------------C------------------CccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeC
Q 000845 508 LPF---------------------G------------------DLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDD 548 (1255)
Q Consensus 508 lp~---------------------g------------------d~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDd 548 (1255)
.|+ + -.........+||||||||++||||+..+|+++||||
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDE 158 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPALLLLDE 158 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 000 0 0011234567899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhh
Q 000845 549 PFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 549 p~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
||++||+.+.+.+.+ .+..+. +++|+|++||+++.+..||+|++|++|++++.|+.+++..
T Consensus 159 P~~~LD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 159 PTVGLDPASRAAIVA-HVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred CccCCCHHHHHHHHH-HHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHH
Confidence 999999999887764 555543 4899999999999988899999999999999999887754
No 450
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=99.96 E-value=2.3e-29 Score=290.85 Aligned_cols=164 Identities=32% Similarity=0.398 Sum_probs=136.6
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cc-------------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MD------------- 504 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~D------------- 504 (1255)
.++++|++++|+. .++|+|+||++++||+++|+|||||||||||++|.|..+|.+| .+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 5889999999964 4689999999999999999999999999999999999999988 11
Q ss_pred ----cCCCCCCC--------------------------------ccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeC
Q 000845 505 ----LKMLPFGD--------------------------------LTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDD 548 (1255)
Q Consensus 505 ----i~~lp~gd--------------------------------~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDd 548 (1255)
...+|+.. .........+|||||||||+||||+..+|+++||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLDE 160 (353)
T TIGR03265 81 VFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPGLLLLDE 160 (353)
T ss_pred EeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 11222100 001234667899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 549 PFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFL-PAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 549 p~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l-~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
|||+||+.+.+++.+ .+..+. .+.|+|+|||+++.+ ..||+|++|++|++++.|+++++...
T Consensus 161 P~s~LD~~~r~~l~~-~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 161 PLSALDARVREHLRT-EIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred CcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999887754 444443 389999999999986 56899999999999999999988653
No 451
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.9e-29 Score=291.88 Aligned_cols=166 Identities=30% Similarity=0.411 Sum_probs=135.9
Q ss_pred EEEEeeEEEecCCC-CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCC---------
Q 000845 445 IFIKSADLSWEADL-LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKML--------- 508 (1255)
Q Consensus 445 i~~~~~~f~w~~~~-~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~l--------- 508 (1255)
++++|++++|+... ..++|+|+||+|++|++++|+||||||||||+++|.|.++|.+| .++..+
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 67899999997321 35799999999999999999999999999999999999999888 122110
Q ss_pred ------CCC-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCE
Q 000845 509 ------PFG-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDI 543 (1255)
Q Consensus 509 ------p~g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~i 543 (1255)
++. +.| .......+|||||||||+||||+..+|++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p~i 161 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALASNPKV 161 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 000 000 01234578999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhhc
Q 000845 544 YLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 544 lLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
+|||||||+||+.+.+.+. +++..+. .|+|+|++||+++.+. .||+|++|++|++++.|+.+++...
T Consensus 162 LlLDEPts~LD~~~~~~l~-~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 162 LLCDEATSALDPATTRSIL-ELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred EEEeCCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999988776 4555443 3899999999999876 5899999999999999999988643
No 452
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=99.96 E-value=2.7e-29 Score=275.75 Aligned_cols=158 Identities=30% Similarity=0.500 Sum_probs=133.9
Q ss_pred CcceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------c----------
Q 000845 441 LEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------D---------- 504 (1255)
Q Consensus 441 ~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------D---------- 504 (1255)
..+.++++|++++|+.....++|+|+||+|++|++++|+||||||||||+++|+|.++|.+|. +
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 346799999999997543347999999999999999999999999999999999999998880 0
Q ss_pred --------------------c-------------------------CCCCCCCccccccCCCcCChHHHHHHHHHHHHcc
Q 000845 505 --------------------L-------------------------KMLPFGDLTQIGERGVNLSGGQKQRIQLARALYQ 539 (1255)
Q Consensus 505 --------------------i-------------------------~~lp~gd~T~iGe~G~~LSGGQkqRIaLARAly~ 539 (1255)
+ +.++.|..+.+..+..+|||||||||+||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 0 0122244455667788999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEE
Q 000845 540 DRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEI 599 (1255)
Q Consensus 540 ~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i 599 (1255)
+|+++||||||++||+.+.+.+. +.+..+.+++|+|++||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQ-QALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHH-HHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999987775 555555567999999999999888999999999874
No 453
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=99.96 E-value=3.6e-29 Score=289.45 Aligned_cols=165 Identities=32% Similarity=0.423 Sum_probs=136.7
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCC--C------cccC--------
Q 000845 443 HSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQ--G------MDLK-------- 506 (1255)
Q Consensus 443 ~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~--G------~Di~-------- 506 (1255)
+.++++|++++|.. .++|+|+||++++||+++|+|||||||||||++|.|..+|.+ | .++.
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ 80 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRG 80 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCC
Confidence 46899999999964 369999999999999999999999999999999999999999 8 1111
Q ss_pred ---------CCCC--------------C------------------CccccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 507 ---------MLPF--------------G------------------DLTQIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 507 ---------~lp~--------------g------------------d~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
.+|+ + -.........+|||||||||+||||+..+|+++|
T Consensus 81 ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~~~P~llL 160 (362)
T TIGR03258 81 LALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIAIEPDVLL 160 (362)
T ss_pred EEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 1111 0 0001234567899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhc-C--CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhhc
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGAL-S--KKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l-~--~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
||||||+||+...+.+.+ .+..+. + |+|+|+|||+++.+. .||+|++|++|++++.|+.+++...
T Consensus 161 LDEP~s~LD~~~r~~l~~-~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 161 LDEPLSALDANIRANMRE-EIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred EcCccccCCHHHHHHHHH-HHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999887764 444443 2 789999999999864 6899999999999999999998643
No 454
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=99.96 E-value=4.2e-29 Score=289.85 Aligned_cols=166 Identities=27% Similarity=0.378 Sum_probs=137.0
Q ss_pred cceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------c------------
Q 000845 442 EHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------M------------ 503 (1255)
Q Consensus 442 ~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~------------ 503 (1255)
...++++|++++|.. .++|+|+||++++||+++|+|||||||||||++|.|..+|.+| .
T Consensus 12 ~~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~i 88 (375)
T PRK09452 12 SPLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHV 88 (375)
T ss_pred CceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCE
Confidence 346899999999963 4689999999999999999999999999999999999999988 1
Q ss_pred -----ccCCCCC---------C------C-----------------ccccccCCCcCChHHHHHHHHHHHHccCCCEEEE
Q 000845 504 -----DLKMLPF---------G------D-----------------LTQIGERGVNLSGGQKQRIQLARALYQDRDIYLL 546 (1255)
Q Consensus 504 -----Di~~lp~---------g------d-----------------~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLL 546 (1255)
|...+|+ + . .........+|||||||||+||||++.+|+++||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~llLL 168 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPKVLLL 168 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 1112221 0 0 0011235578999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 547 DDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFL-PAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 547 Ddp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l-~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
|||||+||++..+.+. +.+..+. .+.|+|+|||+++.+ ..||+|++|++|++++.|+++++...
T Consensus 169 DEP~s~LD~~~r~~l~-~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 169 DESLSALDYKLRKQMQ-NELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred eCCCCcCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999987775 4554443 389999999999875 56899999999999999999988643
No 455
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=99.96 E-value=2.9e-29 Score=262.81 Aligned_cols=151 Identities=34% Similarity=0.543 Sum_probs=123.1
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCCCCC----Ccc
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKMLPFG----DLT 514 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~lp~g----d~T 514 (1255)
++++|++++|+.. ..++++|+||++++||+++|+||+|||||||+++|+|+++|.+| .++...+.. ...
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4689999999743 24699999999999999999999999999999999999999988 222211100 000
Q ss_pred -----------ccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCC
Q 000845 515 -----------QIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQV 582 (1255)
Q Consensus 515 -----------~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l 582 (1255)
.+.++- ||||||||++||||+..+|+++||||||++||+.+.+.+.+ .+..+. +++|+|++||++
T Consensus 80 ~~~q~~~~~~~tv~~~l--LS~G~~qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sh~~ 156 (173)
T cd03246 80 YLPQDDELFSGSIAENI--LSGGQRQRLGLARALYGNPRILVLDEPNSHLDVEGERALNQ-AIAALKAAGATRIVIAHRP 156 (173)
T ss_pred EECCCCccccCcHHHHC--cCHHHHHHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHH-HHHHHHhCCCEEEEEeCCH
Confidence 111111 99999999999999999999999999999999999887764 554443 489999999999
Q ss_pred CccccCCEEEEEeCCEE
Q 000845 583 DFLPAFDSILLISGGEI 599 (1255)
Q Consensus 583 ~~l~~aD~Iivl~~G~i 599 (1255)
+.+..||+|++|++|++
T Consensus 157 ~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 157 ETLASADRILVLEDGRV 173 (173)
T ss_pred HHHHhCCEEEEEECCCC
Confidence 98888999999999974
No 456
>PLN03073 ABC transporter F family; Provisional
Probab=99.96 E-value=4.7e-29 Score=311.68 Aligned_cols=226 Identities=18% Similarity=0.197 Sum_probs=161.7
Q ss_pred ceEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccC---CCCCCEEEEcCEeCCC--CCh--
Q 000845 1002 GKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLV---EPTGGKIIIDGLDITT--IGL-- 1074 (1255)
Q Consensus 1002 g~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~---~~~~G~I~idG~di~~--i~~-- 1074 (1255)
..|+++|++++|+. .++|+|+||+|++||++|||||||||||||+++|.|.. .|.+|+|.+.++++.. ++.
T Consensus 176 ~~I~i~nls~~y~~--~~ll~~isl~i~~Ge~~gLvG~NGsGKSTLLr~l~g~~~~g~p~~g~I~~~~Q~~~g~~~t~~~ 253 (718)
T PLN03073 176 KDIHMENFSISVGG--RDLIVDASVTLAFGRHYGLVGRNGTGKTTFLRYMAMHAIDGIPKNCQILHVEQEVVGDDTTALQ 253 (718)
T ss_pred eeEEEceEEEEeCC--CEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCCCCEEEEEeccCCCCCCCHHH
Confidence 46999999999953 35999999999999999999999999999999999864 5789999865554321 111
Q ss_pred ----------HHhhcccEEEccCCccCCCchhhhccc-CC-CCChHHHHhccCchhHHHhccHH------HHHHhhh--c
Q 000845 1075 ----------YDLRSNLGIIPQDPTLFSGSVRYNLDP-LS-QFTDQEIWEVTIPSQVLEKCQLR------EVIQEKK--E 1134 (1255)
Q Consensus 1075 ----------~~lR~~i~~vpQdp~Lf~gTIr~Nl~~-~~-~~sd~ei~~~~~~~~al~~~~l~------~~i~~lp--~ 1134 (1255)
..++..+++++|+|.+...+..+|... .. ..+.+++.+. ..++++..++. +-+...- -
T Consensus 254 ~v~~~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~~~~~~r~~~~L~~l 331 (718)
T PLN03073 254 CVLNTDIERTQLLEEEAQLVAQQRELEFETETGKGKGANKDGVDKDAVSQR--LEEIYKRLELIDAYTAEARAASILAGL 331 (718)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccchHHHHHH--HHHHHHHHHhcCcchHHHHHHHHHHHC
Confidence 113556899999987654455555421 11 1122222110 00133332221 1111111 1
Q ss_pred Ccc-chhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcCCcEEEEeccCchhhhh-cC
Q 000845 1135 GLD-SLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMD-CN 1212 (1255)
Q Consensus 1135 gld-t~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~D 1212 (1255)
|++ ......-.+||||||||++|||||+.+|+||||||||++||+.+...+.+.|++. ++|+|+|+|+++.+.. ||
T Consensus 332 gl~~~~~~~~~~~LSgG~k~rv~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~~tviivsHd~~~l~~~~d 409 (718)
T PLN03073 332 SFTPEMQVKATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKW--PKTFIVVSHAREFLNTVVT 409 (718)
T ss_pred CCChHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCC
Confidence 332 1122223579999999999999999999999999999999999999999999875 6899999999999987 99
Q ss_pred EEEEEeCCEEE-EEcChhHHhh
Q 000845 1213 MVLSMSDGKLV-EYDEPKKLLR 1233 (1255)
Q Consensus 1213 rI~vl~~G~iv-e~G~~~eLl~ 1233 (1255)
+|++|++|+++ ..|++.+...
T Consensus 410 ~i~~l~~g~i~~~~g~~~~~~~ 431 (718)
T PLN03073 410 DILHLHGQKLVTYKGDYDTFER 431 (718)
T ss_pred EEEEEECCEEEEeCCCHHHHHH
Confidence 99999999997 4667665543
No 457
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=99.96 E-value=6.3e-29 Score=268.73 Aligned_cols=161 Identities=30% Similarity=0.496 Sum_probs=134.1
Q ss_pred cceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------cc----------
Q 000845 442 EHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DL---------- 505 (1255)
Q Consensus 442 ~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di---------- 505 (1255)
.+.++++|++++|+... .++|+|+||++++|++++|+|++|||||||+++|+|++++.+|. ++
T Consensus 4 ~~~l~~~~l~~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (207)
T cd03369 4 HGEIEVENLSVRYAPDL-PPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRS 82 (207)
T ss_pred CCeEEEEEEEEEeCCCC-cccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHh
Confidence 45689999999997532 37999999999999999999999999999999999999999881 10
Q ss_pred --------------------CCCCCCCc------cccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHH
Q 000845 506 --------------------KMLPFGDL------TQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAK 559 (1255)
Q Consensus 506 --------------------~~lp~gd~------T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~ 559 (1255)
.....-+. ..++.+..+||||||||++||||++.+|+++||||||++||+.+.+
T Consensus 83 ~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~ 162 (207)
T cd03369 83 SLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALRVSEGGLNLSQGQRQLLCLARALLKRPRVLVLDEATASIDYATDA 162 (207)
T ss_pred hEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHH
Confidence 00000000 1135567899999999999999999999999999999999999987
Q ss_pred HHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecC
Q 000845 560 FLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAAT 604 (1255)
Q Consensus 560 ~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~ 604 (1255)
.+. +.+..+.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 163 ~l~-~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 163 LIQ-KTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred HHH-HHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 665 55555556899999999999988899999999999988775
No 458
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=99.96 E-value=3.9e-29 Score=263.61 Aligned_cols=154 Identities=33% Similarity=0.465 Sum_probs=127.9
Q ss_pred EEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCCCC---------
Q 000845 446 FIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKMLPF--------- 510 (1255)
Q Consensus 446 ~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~lp~--------- 510 (1255)
+++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|.|.++|.+| .++..++.
T Consensus 1 ~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 77 (180)
T cd03214 1 EVENLSVGYGG---RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAY 77 (180)
T ss_pred CeeEEEEEECC---eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhH
Confidence 36889999964 4699999999999999999999999999999999999999998 23322111
Q ss_pred --------CCccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEcc
Q 000845 511 --------GDLTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALS--KKTVLLVTH 580 (1255)
Q Consensus 511 --------gd~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~--~kTvIlvTH 580 (1255)
|-...+...+.+||||||||++||||+..+|+++||||||++||+.+.+.+. +++..+.+ ++|+|++||
T Consensus 78 ~~q~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~-~~l~~~~~~~~~tiii~sh 156 (180)
T cd03214 78 VPQALELLGLAHLADRPFNELSGGERQRVLLARALAQEPPILLLDEPTSHLDIAHQIELL-ELLRRLARERGKTVVMVLH 156 (180)
T ss_pred HHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHH-HHHHHHHHhcCCEEEEEeC
Confidence 1111234567889999999999999999999999999999999999987665 56655543 789999999
Q ss_pred CCCcc-ccCCEEEEEeCCEEEEec
Q 000845 581 QVDFL-PAFDSILLISGGEIIQAA 603 (1255)
Q Consensus 581 ~l~~l-~~aD~Iivl~~G~i~~~G 603 (1255)
+++.+ ..||++++|++|++++.|
T Consensus 157 ~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 157 DLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred CHHHHHHhCCEEEEEECCEEEecC
Confidence 99997 568999999999997653
No 459
>PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). On the basis of sequence similarities a family of related ATP-binding proteins has been characterised [, , , , ]. The proteins belonging to this family also contain one or two copies of the 'A' consensus sequence [] or the 'P-loop' [] (see IPR001687 from INTERPRO).; GO: 0005524 ATP binding, 0016887 ATPase activity; PDB: 3NHB_A 3NH9_A 3NHA_A 3NH6_A 1VCI_A 1V43_A 2YZ2_B 2PMK_A 2FFA_A 1XEF_D ....
Probab=99.96 E-value=9.5e-30 Score=256.43 Aligned_cols=136 Identities=40% Similarity=0.678 Sum_probs=122.7
Q ss_pred eeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcCEeCCCCChHHhhcccEEEccCCccCCC-chhhhc
Q 000845 1021 LRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSG-SVRYNL 1099 (1255)
Q Consensus 1021 L~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~vpQdp~Lf~g-TIr~Nl 1099 (1255)
|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.+||.++...+...+|+.++++||++.+|.+ |+++|
T Consensus 1 L~~v~~~i~~g~~~~i~G~nGsGKStLl~~l~g~~~~~~G~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~tv~~~- 79 (137)
T PF00005_consen 1 LKNVSLEIKPGEIVAIVGPNGSGKSTLLKALAGLLPPDSGSILINGKDISDIDIEELRRRIGYVPQDPQLFPGLTVREN- 79 (137)
T ss_dssp EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSSHESEEEEEETTEEGTTSHHHHHHHTEEEEESSHCHHTTSBHHHH-
T ss_pred CCceEEEEcCCCEEEEEccCCCccccceeeecccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999987 59999
Q ss_pred ccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHHHHHHHHHHccCCCeEEEecCCC
Q 000845 1100 DPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATA 1175 (1255)
Q Consensus 1100 ~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDE~TS 1175 (1255)
..++++.+ +++.+++.+ ..+..++.....||+|||||++||||++++|++||||||||
T Consensus 80 -----~~~~~~~~------~l~~l~~~~-------~~~~~~~~~~~~LS~Ge~~rl~la~al~~~~~llllDEPt~ 137 (137)
T PF00005_consen 80 -----ESDERIEE------VLKKLGLED-------LLDRKIGQRASSLSGGEKQRLALARALLKNPKLLLLDEPTN 137 (137)
T ss_dssp -----HHHHHHHH------HHHHTTHGG-------GTGSBGTSCGGGSCHHHHHHHHHHHHHHTTSSEEEEESTTT
T ss_pred -----cccccccc------ccccccccc-------ccccccccccchhhHHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 23455655 777776644 35677777778999999999999999999999999999997
No 460
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.96 E-value=3.8e-29 Score=287.12 Aligned_cols=169 Identities=19% Similarity=0.337 Sum_probs=138.4
Q ss_pred cceEEEEeeEEEecCCC-CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCC---CC------cccCC----
Q 000845 442 EHSIFIKSADLSWEADL-LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRL---QG------MDLKM---- 507 (1255)
Q Consensus 442 ~~~i~~~~~~f~w~~~~-~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~---~G------~Di~~---- 507 (1255)
+..++++|++++|.... ..++|+|+||+|++||+++|+|+||||||||+++|+|.+++. +| .|+..
T Consensus 10 ~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~ 89 (330)
T PRK09473 10 DALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEK 89 (330)
T ss_pred CceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHH
Confidence 34689999999996432 246999999999999999999999999999999999999885 66 11110
Q ss_pred ------------CCC-----------------------CC----------------------ccccccCCCcCChHHHHH
Q 000845 508 ------------LPF-----------------------GD----------------------LTQIGERGVNLSGGQKQR 530 (1255)
Q Consensus 508 ------------lp~-----------------------gd----------------------~T~iGe~G~~LSGGQkqR 530 (1255)
.++ +. .+.++..+..||||||||
T Consensus 90 ~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~QR 169 (330)
T PRK09473 90 ELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQR 169 (330)
T ss_pred HHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHHH
Confidence 000 00 011234567899999999
Q ss_pred HHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhH
Q 000845 531 IQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDH 607 (1255)
Q Consensus 531 IaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~e 607 (1255)
|+||||++.+|+++|+||||||||+.+.+.+. +++..+. .+.|+|+|||+++.+. .||+|++|++|+|++.|+.++
T Consensus 170 v~IArAL~~~P~llilDEPts~LD~~~~~~i~-~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~~ 248 (330)
T PRK09473 170 VMIAMALLCRPKLLIADEPTTALDVTVQAQIM-TLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARD 248 (330)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHH-HHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999998886 4555543 3899999999999986 589999999999999999999
Q ss_pred Hhhc
Q 000845 608 LLVT 611 (1255)
Q Consensus 608 l~~~ 611 (1255)
+...
T Consensus 249 i~~~ 252 (330)
T PRK09473 249 VFYQ 252 (330)
T ss_pred HHhC
Confidence 8753
No 461
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=3.4e-29 Score=287.34 Aligned_cols=167 Identities=21% Similarity=0.361 Sum_probs=135.9
Q ss_pred eEEEEeeEEEecCCCC-CCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCC----CCC------cccCC-----
Q 000845 444 SIFIKSADLSWEADLL-NPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPR----LQG------MDLKM----- 507 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~-~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~----~~G------~Di~~----- 507 (1255)
.++++|++++|+.... .++|+||||+|++||+++|+|+||||||||+++|+|.+++ ++| .|+..
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4789999999975322 3699999999999999999999999999999999999973 555 22211
Q ss_pred -----------CCCCC-------c--------------------------------------cccccCCCcCChHHHHHH
Q 000845 508 -----------LPFGD-------L--------------------------------------TQIGERGVNLSGGQKQRI 531 (1255)
Q Consensus 508 -----------lp~gd-------~--------------------------------------T~iGe~G~~LSGGQkqRI 531 (1255)
.++.. . ........+|||||||||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv 162 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRV 162 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHH
Confidence 11100 0 011235678999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHH
Q 000845 532 QLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHL 608 (1255)
Q Consensus 532 aLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el 608 (1255)
+||||+..+|+++|+|||||+||+.+...+.+ ++..+. .|.|+|+|||+++.+. .||+|++|.+|+|++.|+.+++
T Consensus 163 ~iArAL~~~P~llilDEPts~LD~~~~~~il~-lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~~~~ 241 (326)
T PRK11022 163 MIAMAIACRPKLLIADEPTTALDVTIQAQIIE-LLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGKAHDI 241 (326)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999888764 454443 4899999999999985 6899999999999999999998
Q ss_pred hhc
Q 000845 609 LVT 611 (1255)
Q Consensus 609 ~~~ 611 (1255)
...
T Consensus 242 ~~~ 244 (326)
T PRK11022 242 FRA 244 (326)
T ss_pred hhC
Confidence 754
No 462
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=6.3e-29 Score=281.46 Aligned_cols=167 Identities=23% Similarity=0.438 Sum_probs=136.8
Q ss_pred eEEEEeeEEEecCCC--CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC---------
Q 000845 444 SIFIKSADLSWEADL--LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK--------- 506 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~--~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~--------- 506 (1255)
.++++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|.|.++|..| .++.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997432 24799999999999999999999999999999999999999888 1110
Q ss_pred -------CCCC----------------------------------------CCcc-ccccCCCcCChHHHHHHHHHHHHc
Q 000845 507 -------MLPF----------------------------------------GDLT-QIGERGVNLSGGQKQRIQLARALY 538 (1255)
Q Consensus 507 -------~lp~----------------------------------------gd~T-~iGe~G~~LSGGQkqRIaLARAly 538 (1255)
..++ |..+ .....+.+||||||||++||||++
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL~ 161 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILA 161 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 0011 0000 112356889999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhhc
Q 000845 539 QDRDIYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 539 ~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
.+|+++||||||++||+.+.+.+. +++..+. .|+|+|++||+++.+. .||+|++|++|++++.|+.+++...
T Consensus 162 ~~p~illlDEPt~~LD~~~~~~l~-~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 236 (286)
T PRK13646 162 MNPDIIVLDEPTAGLDPQSKRQVM-RLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFKD 236 (286)
T ss_pred hCCCEEEEECCcccCCHHHHHHHH-HHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999988775 5555543 4899999999999875 6899999999999999999887643
No 463
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.96 E-value=2.5e-29 Score=273.26 Aligned_cols=155 Identities=34% Similarity=0.428 Sum_probs=126.6
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCC----------C
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKM----------L 508 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~----------l 508 (1255)
++++|++++|+. +++|+|+||++++|++++|+||||||||||+++|+|.++|.+| .++.. .
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEE
Confidence 367899999964 4799999999999999999999999999999999999999888 12111 0
Q ss_pred CCC-----Cc----------------------------------cccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCc
Q 000845 509 PFG-----DL----------------------------------TQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDP 549 (1255)
Q Consensus 509 p~g-----d~----------------------------------T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp 549 (1255)
|+. +. ........+||||||||++||||+..+|+++|||||
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEP 157 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLDEP 157 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 100 00 011234568999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEec
Q 000845 550 FSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAA 603 (1255)
Q Consensus 550 ~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G 603 (1255)
|++||+.+.+.++ +++..+. .++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 158 t~~LD~~~~~~l~-~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 158 LSALDAKLREELR-EELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred cccCCHHHHHHHH-HHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999988776 5555543 3899999999999875 58999999999998765
No 464
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=99.96 E-value=5e-29 Score=286.59 Aligned_cols=165 Identities=28% Similarity=0.446 Sum_probs=136.4
Q ss_pred cceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC---------
Q 000845 442 EHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK--------- 506 (1255)
Q Consensus 442 ~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~--------- 506 (1255)
...|+++|++++|+. ..+|+|+||+|++|++++++||||||||||+++|+|.++|.+| .|+.
T Consensus 39 ~~~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 39 TVAIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred ceeEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 346999999999963 3699999999999999999999999999999999999999988 1110
Q ss_pred --CCCCC-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 507 --MLPFG-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 507 --~lp~g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
.+|+. +.| ....+..+||||||||++||||+..+|+++|
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lLi 195 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQLLI 195 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 00000 000 0123456899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
|||||++||+.+.+.+++ ++..+. +|+|+|++||+++.+. .||+|++|++|+++..|+.+++..
T Consensus 196 LDEPt~gLD~~~r~~l~~-~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 196 LDEPTTGLDPHARHLIWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred EECCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999887764 554443 5899999999999986 589999999999999999998754
No 465
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=99.96 E-value=4.8e-29 Score=284.88 Aligned_cols=164 Identities=27% Similarity=0.422 Sum_probs=135.1
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC----------
Q 000845 443 HSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK---------- 506 (1255)
Q Consensus 443 ~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~---------- 506 (1255)
..++++|++++|+. .++|+|+||++++|++++|+||||||||||+++|+|.++|.+| .++.
T Consensus 3 ~~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 3 VAIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAI 79 (303)
T ss_pred cEEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcE
Confidence 35899999999963 4699999999999999999999999999999999999999888 1110
Q ss_pred -CCCCC-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCEEEE
Q 000845 507 -MLPFG-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDIYLL 546 (1255)
Q Consensus 507 -~lp~g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~ilLL 546 (1255)
.+|+. +.| .......+||||||||++||||+..+|+++||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllL 159 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQLLIL 159 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 00000 000 01234568999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 547 DDPFSALDAKTAKFLFTEYVMGA-LSKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 547 Ddp~SaLD~~~~~~i~~~~i~~~-l~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
||||++||+.+.+.+++ ++..+ .+|+|+|++||+++.+. .||+|++|++|+++..|+.+++..
T Consensus 160 DEPt~gLD~~~~~~l~~-~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 160 DEPTTGLDPHARHLIWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred eCCCcCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999887764 55444 35899999999999885 589999999999999999988753
No 466
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=99.96 E-value=3.5e-29 Score=273.73 Aligned_cols=162 Identities=28% Similarity=0.495 Sum_probs=132.6
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccC-----------C
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLK-----------M 507 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~-----------~ 507 (1255)
++++|+++.|+.. .+++|+|+||++++|++++|+||||||||||+++|.|.++|.+|. ++. .
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEE
Confidence 4688999999642 247999999999999999999999999999999999999998881 110 0
Q ss_pred CCCC-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCEEEEeC
Q 000845 508 LPFG-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDIYLLDD 548 (1255)
Q Consensus 508 lp~g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDd 548 (1255)
.++. ..| .......+||||||||++||||+..+|+++||||
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDE 159 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLLLDE 159 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 0000 000 0123457899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHH
Q 000845 549 PFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHL 608 (1255)
Q Consensus 549 p~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el 608 (1255)
||++||+.+.+.+. +.+..+.+++|+|++||+++.+. .||++++|++|++++.|+.+++
T Consensus 160 P~~~LD~~~~~~l~-~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 160 PTSGLDPASRRAIW-DLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCCCCCHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999987775 55655556799999999999886 5899999999999999987764
No 467
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.96 E-value=4.3e-29 Score=275.48 Aligned_cols=164 Identities=30% Similarity=0.447 Sum_probs=133.3
Q ss_pred EEEEeeEEEecCCC-CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCC---------
Q 000845 445 IFIKSADLSWEADL-LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKML--------- 508 (1255)
Q Consensus 445 i~~~~~~f~w~~~~-~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~l--------- 508 (1255)
++++|++++|+... ..++|+|+||++++||+++|+||||||||||+++|.|.++|.+| .++...
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 67899999996431 12799999999999999999999999999999999999999888 111100
Q ss_pred ------CCC-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCE
Q 000845 509 ------PFG-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDI 543 (1255)
Q Consensus 509 ------p~g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~i 543 (1255)
|+. ..| .......+||||||||++||||+..+|++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 161 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALANNPKV 161 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 000 000 11234578999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHh
Q 000845 544 YLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLL 609 (1255)
Q Consensus 544 lLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~ 609 (1255)
+||||||++||+.+.+.++ +++..+. .++|+|++||+++.+. .||++++|++|++++.|+.+++.
T Consensus 162 llLDEP~~~LD~~~~~~l~-~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 162 LLCDEATSALDPETTQSIL-ALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred EEecCCCCcCCHHHHHHHH-HHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999987765 5555443 3899999999999876 58999999999999999887764
No 468
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.96 E-value=3.4e-29 Score=273.60 Aligned_cols=160 Identities=27% Similarity=0.426 Sum_probs=129.9
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC-----------C
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK-----------M 507 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~-----------~ 507 (1255)
++++|++++|+. +++|+|+||++++||+++|+|+||||||||+++|.|.++|.+| .++. .
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEE
Confidence 468899999963 3699999999999999999999999999999999999999888 1110 0
Q ss_pred CCCC-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCEEEEeC
Q 000845 508 LPFG-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDIYLLDD 548 (1255)
Q Consensus 508 lp~g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDd 548 (1255)
.|+. +.| .......+||||||||++||||++.+|+++||||
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDE 157 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDE 157 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 0000 000 0112356899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhhhc-C-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHH
Q 000845 549 PFSALDAKTAKFLFTEYVMGAL-S-KKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHL 608 (1255)
Q Consensus 549 p~SaLD~~~~~~i~~~~i~~~l-~-~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el 608 (1255)
||++||+++.+.+. +.+..+. + ++|+|++||+++.+. .||+|++|++|++++.|+.+++
T Consensus 158 Pt~~LD~~~~~~l~-~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 158 PTIGLDPQTRAHVW-EYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CccCCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999987775 4554443 3 789999999999876 5899999999999998887653
No 469
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=99.96 E-value=3.9e-29 Score=272.92 Aligned_cols=158 Identities=25% Similarity=0.389 Sum_probs=127.8
Q ss_pred EEEEeeEEEecCCCC-CCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccC-----------
Q 000845 445 IFIKSADLSWEADLL-NPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLK----------- 506 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~-~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~----------- 506 (1255)
++++|++++|+.... .++|+|+||++++|++++|+|+||||||||+++|.|.++|.+|. ++.
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 678999999975321 26999999999999999999999999999999999999999881 110
Q ss_pred CCCCC-----Cc----------------------------------cccccCCCcCChHHHHHHHHHHHHccCCCEEEEe
Q 000845 507 MLPFG-----DL----------------------------------TQIGERGVNLSGGQKQRIQLARALYQDRDIYLLD 547 (1255)
Q Consensus 507 ~lp~g-----d~----------------------------------T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLD 547 (1255)
..|+. .. ........+||||||||++||||++.+|+++|||
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlD 161 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLD 161 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 00000 00 0123356789999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEec
Q 000845 548 DPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAA 603 (1255)
Q Consensus 548 dp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G 603 (1255)
|||++||+.+.+.+. +.+..+. +++|+|++||+++.+. .||++++|++|++++.|
T Consensus 162 EPt~~LD~~~~~~l~-~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 162 EPTTGLDVMATRALR-EFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCcCCCHHHHHHHH-HHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999987775 4555443 5899999999999875 58999999999998754
No 470
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=99.96 E-value=3.9e-29 Score=276.44 Aligned_cols=161 Identities=28% Similarity=0.426 Sum_probs=132.3
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccC------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLK------------ 506 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~------------ 506 (1255)
++++|++++|+. +++|+|+||++++|++++|+||||||||||+++|.|.++|.+|. ++.
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 357899999963 36999999999999999999999999999999999999998881 110
Q ss_pred --------CCC--------------CCC---------------c-------------cccccCCCcCChHHHHHHHHHHH
Q 000845 507 --------MLP--------------FGD---------------L-------------TQIGERGVNLSGGQKQRIQLARA 536 (1255)
Q Consensus 507 --------~lp--------------~gd---------------~-------------T~iGe~G~~LSGGQkqRIaLARA 536 (1255)
.+| .+. . ........+||||||||++||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~a 157 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIARA 157 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHHH
Confidence 000 000 0 01223456899999999999999
Q ss_pred HccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHh
Q 000845 537 LYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLL 609 (1255)
Q Consensus 537 ly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~ 609 (1255)
+..+|+++||||||++||+.+.+.+++ .+..+. +++|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 158 l~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (236)
T cd03219 158 LATDPKLLLLDEPAAGLNPEETEELAE-LIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVR 231 (236)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhc
Confidence 999999999999999999999887765 454443 6899999999999985 48999999999999999988764
No 471
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.96 E-value=4.5e-29 Score=276.10 Aligned_cols=162 Identities=31% Similarity=0.398 Sum_probs=133.2
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK------------ 506 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~------------ 506 (1255)
++++|++++|+. +++|+|+||++++|++++|+||||||||||+++|.|.++|.+| .++.
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v 79 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFV 79 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEE
Confidence 689999999964 4799999999999999999999999999999999999999888 1110
Q ss_pred -----CCC--------------CC-----Cc-----------------cccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 507 -----MLP--------------FG-----DL-----------------TQIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 507 -----~lp--------------~g-----d~-----------------T~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
.++ .+ +. ........+||||||||++||||++.+|+++|
T Consensus 80 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~lll 159 (239)
T cd03296 80 FQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAVEPKVLL 159 (239)
T ss_pred ecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 000 00 00 00123456899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
|||||++||+++.+.+. +++..+. .++|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 160 lDEP~~~LD~~~~~~l~-~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 160 LDEPFGALDAKVRKELR-RWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred EcCCcccCCHHHHHHHH-HHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999987775 5565543 3789999999999865 589999999999999999887753
No 472
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=7.8e-29 Score=281.02 Aligned_cols=166 Identities=25% Similarity=0.376 Sum_probs=135.8
Q ss_pred EEEEeeEEEecCCC--CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC----------
Q 000845 445 IFIKSADLSWEADL--LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK---------- 506 (1255)
Q Consensus 445 i~~~~~~f~w~~~~--~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~---------- 506 (1255)
++++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|.+| .++.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997432 14699999999999999999999999999999999999999888 1211
Q ss_pred ------CCCCC-C-----cc----------------------------------c-cccCCCcCChHHHHHHHHHHHHcc
Q 000845 507 ------MLPFG-D-----LT----------------------------------Q-IGERGVNLSGGQKQRIQLARALYQ 539 (1255)
Q Consensus 507 ------~lp~g-d-----~T----------------------------------~-iGe~G~~LSGGQkqRIaLARAly~ 539 (1255)
..++. + .| . ......+||||||||++||||++.
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~~ 162 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLAM 162 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 01110 0 00 0 123467899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhhc
Q 000845 540 DRDIYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 540 ~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
+|+++||||||++||+.+.+.+. +++..+. .|+|+|++||+++.+. .||+|++|++|++++.|+.+++...
T Consensus 163 ~P~llllDEPt~~LD~~~~~~l~-~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 236 (290)
T PRK13634 163 EPEVLVLDEPTAGLDPKGRKEMM-EMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFAD 236 (290)
T ss_pred CCCEEEEECCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999988775 4555543 3899999999999875 6899999999999999998887643
No 473
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=7.5e-29 Score=279.05 Aligned_cols=163 Identities=28% Similarity=0.387 Sum_probs=134.9
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCC-----------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKM----------- 507 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~----------- 507 (1255)
++++|++++|+.+ .++|+|+||+|++||+++|+|+||||||||+++|.|.++|.+| .++..
T Consensus 2 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPDG--TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCCC--CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 6789999999632 3699999999999999999999999999999999999999888 11100
Q ss_pred --CCCC------Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 508 --LPFG------DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 508 --lp~g------d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
+|+. +.| ........||||||||++||||++.+|+++|
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 159 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEPECLI 159 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 0000 000 0123567899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhh
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
|||||++||+.+.+.+++ ++..+. +|+|+|++||+++.++.||+|++|++|++++.|+.+++..
T Consensus 160 LDEPt~gLD~~~~~~l~~-~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 160 FDEVTSMLDPDSGIAVLE-RIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred EeCCcccCCHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999877764 454443 5899999999999988899999999999999999888754
No 474
>COG4107 PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.5e-28 Score=237.50 Aligned_cols=236 Identities=21% Similarity=0.354 Sum_probs=176.7
Q ss_pred eEEEEEEEEEeCCCCCceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCCCEEEEcC-----EeCCCCChHH-
Q 000845 1003 KVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDG-----LDITTIGLYD- 1076 (1255)
Q Consensus 1003 ~I~~~nvs~~Y~~~~~~vL~~is~~I~~Ge~vaIvG~sGsGKSTLl~lL~rl~~~~~G~I~idG-----~di~~i~~~~- 1076 (1255)
-++++++|..|.+.. -.+||||.+.|||..||||.||||||||+++|.+-+.|+.|+|.++- .|+-.++..+
T Consensus 6 LL~V~~lsk~Yg~~~--gc~~vsF~l~PGeVLgiVGESGSGKtTLL~~is~rl~p~~G~v~Y~~r~~~~~dl~~msEaeR 83 (258)
T COG4107 6 LLSVSGLSKLYGPGK--GCRDVSFDLYPGEVLGIVGESGSGKTTLLKCISGRLTPDAGTVTYRMRDGQPRDLYTMSEAER 83 (258)
T ss_pred ceeehhhhhhhCCCc--CccccceeecCCcEEEEEecCCCcHHhHHHHHhcccCCCCCeEEEEcCCCCchhHhhhchHHH
Confidence 478899999997653 68999999999999999999999999999999999999999999875 3444444333
Q ss_pred ---hhcccEEEccCCccCCCchhhhcccCCCCChHHHHhccCchhHHHhccHHHHHHhhhcCccchhcCCCCCCChhHHH
Q 000845 1077 ---LRSNLGIIPQDPTLFSGSVRYNLDPLSQFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQ 1153 (1255)
Q Consensus 1077 ---lR~~i~~vpQdp~Lf~gTIr~Nl~~~~~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1153 (1255)
+|..-++|.|+|- .-+|-.....++.- |.+.....+..---++...++.++..-.+ +.+.+....||||.+|
T Consensus 84 R~L~RTeWG~VhQnP~---DGLRm~VSAG~NiG-ERlma~G~RHYG~iR~~a~~WL~~VEI~~-~RiDD~PrtFSGGMqQ 158 (258)
T COG4107 84 RRLLRTEWGFVHQNPR---DGLRMQVSAGGNIG-ERLMAIGARHYGNIRAEAQDWLEEVEIDL-DRIDDLPRTFSGGMQQ 158 (258)
T ss_pred HHHhhhccceeecCcc---ccceeeeccCCccc-hhHHhhhhhhhhhHHHHHHHHHHhcccCc-ccccCcccccchHHHH
Confidence 3556799999994 11111111111111 11111000000000111223443332222 3455666889999999
Q ss_pred HHHHHHHHccCCCeEEEecCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeccCchhhhh-cCEEEEEeCCEEEEEcChhH
Q 000845 1154 LIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFA--NCTVITVAHRIATVMD-CNMVLSMSDGKLVEYDEPKK 1230 (1255)
Q Consensus 1154 rl~lARAlL~~~~ILiLDE~TS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1230 (1255)
|+.|||-|...|+++++||||-+||....+.+.+.++.... +-.+++|||++...+- +||.+||.+|+++|.|-.+.
T Consensus 159 RLQiARnLVt~PrLvfMDEPTGGLDVSVQARLLDllrgLv~~l~la~viVTHDl~VarLla~rlmvmk~g~vve~GLTDr 238 (258)
T COG4107 159 RLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLADRLMVMKQGQVVESGLTDR 238 (258)
T ss_pred HHHHHHHhccCCceEEecCCCCCcchhhHHHHHHHHHHHHHhcCceEEEEechhHHHHHhhhcceeecCCCEeccccccc
Confidence 99999999999999999999999999999999999987653 5689999999999875 99999999999999999999
Q ss_pred HhhcCChHHHHHHHH
Q 000845 1231 LLRRQDSLFAQLVKE 1245 (1255)
Q Consensus 1231 Ll~~~~~~f~~l~~~ 1245 (1255)
.+.+|.-.|.+|+-.
T Consensus 239 vLDDP~hPYTQLLVS 253 (258)
T COG4107 239 VLDDPHHPYTQLLVS 253 (258)
T ss_pred cccCCCCchHHHHHH
Confidence 999999899988754
No 475
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.96 E-value=2.8e-29 Score=276.32 Aligned_cols=160 Identities=29% Similarity=0.477 Sum_probs=132.2
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccC------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLK------------ 506 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~------------ 506 (1255)
++++|+++.|+. +++|+|+||++++||+++|+|+||||||||+++|.|.++|.+|. ++.
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 368999999963 37999999999999999999999999999999999999998881 110
Q ss_pred -CCCC---------------------CC----------------ccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeC
Q 000845 507 -MLPF---------------------GD----------------LTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDD 548 (1255)
Q Consensus 507 -~lp~---------------------gd----------------~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDd 548 (1255)
.+|+ +. .........+||||||||++||||++.+|+++||||
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDE 157 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDE 157 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecC
Confidence 0000 00 001123456799999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHH
Q 000845 549 PFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHL 608 (1255)
Q Consensus 549 p~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el 608 (1255)
||++||+.+.+.+. +.+..+. .++|+|++||+++.+. .||+|+++++|++++.|+.+++
T Consensus 158 Pt~~LD~~~~~~l~-~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 158 PTEGIQPSIIKDIG-RVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CcccCCHHHHHHHH-HHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999988775 4554443 3799999999999987 5899999999999999998886
No 476
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.96 E-value=4.8e-29 Score=276.48 Aligned_cols=163 Identities=32% Similarity=0.449 Sum_probs=132.5
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK------------ 506 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~------------ 506 (1255)
++++|++++|+.. .++|+|+||+|++|++++|+||||||||||+++|.|.++|.+| .++.
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 3678999999742 4699999999999999999999999999999999999999888 1110
Q ss_pred -------CCCC--------------C-C-----------------cc--ccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 507 -------MLPF--------------G-D-----------------LT--QIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 507 -------~lp~--------------g-d-----------------~T--~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
.++. + + .. .....+.+||||||||++||||++.+|+++|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 158 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLL 158 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 0000 0 0 00 1234467899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
|||||++||+.+.+.+. +++..+. +++|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 159 lDEPt~~LD~~~~~~l~-~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 159 MDEPFGALDPITRDQLQ-EEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred ecCCcccCCHHHHHHHH-HHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 99999999999987665 4554443 3899999999999765 589999999999999999887753
No 477
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=6.9e-29 Score=284.59 Aligned_cols=168 Identities=23% Similarity=0.324 Sum_probs=137.6
Q ss_pred ceEEEEeeEEEecCCC-------CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCC-
Q 000845 443 HSIFIKSADLSWEADL-------LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKML- 508 (1255)
Q Consensus 443 ~~i~~~~~~f~w~~~~-------~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~l- 508 (1255)
..++++|++++|+... ..++|+||||+|++||+++|+|+||||||||+++|+|.+++.+| .|+..+
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 3689999999997421 24699999999999999999999999999999999999999888 121110
Q ss_pred --------------CCCC-------cc------------------------------------ccccCCCcCChHHHHHH
Q 000845 509 --------------PFGD-------LT------------------------------------QIGERGVNLSGGQKQRI 531 (1255)
Q Consensus 509 --------------p~gd-------~T------------------------------------~iGe~G~~LSGGQkqRI 531 (1255)
++.. .| ........|||||||||
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv 163 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRI 163 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHH
Confidence 0000 00 01223568999999999
Q ss_pred HHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHH
Q 000845 532 QLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHL 608 (1255)
Q Consensus 532 aLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el 608 (1255)
+||||+..+|+++|+||||++||+.+.+.|++ ++..+. .|.|+|+|||+++.+. .||+|++|++|+|++.|+.+++
T Consensus 164 ~iArAL~~~P~lLilDEPts~LD~~~~~~i~~-lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~~~ 242 (327)
T PRK11308 164 AIARALMLDPDVVVADEPVSALDVSVQAQVLN-LMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQI 242 (327)
T ss_pred HHHHHHHcCCCEEEEECCCccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999988875 444443 3899999999999986 5899999999999999999998
Q ss_pred hhc
Q 000845 609 LVT 611 (1255)
Q Consensus 609 ~~~ 611 (1255)
...
T Consensus 243 ~~~ 245 (327)
T PRK11308 243 FNN 245 (327)
T ss_pred hcC
Confidence 754
No 478
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=99.96 E-value=3.4e-29 Score=274.33 Aligned_cols=161 Identities=29% Similarity=0.433 Sum_probs=131.4
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccCC-----------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLKM----------- 507 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~~----------- 507 (1255)
++++|++++|+. +++|+|+||++++||+++|+||||||||||+++|.|.++|.+|. ++..
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 468899999963 37999999999999999999999999999999999999998881 1100
Q ss_pred --CCC---------------------CC-----------------ccccccCCCcCChHHHHHHHHHHHHccCCCEEEEe
Q 000845 508 --LPF---------------------GD-----------------LTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLD 547 (1255)
Q Consensus 508 --lp~---------------------gd-----------------~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLD 547 (1255)
+|+ +. ......+..+||||||||++||||+..+|+++|||
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllD 157 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLD 157 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 000 00 00112345689999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHh
Q 000845 548 DPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLL 609 (1255)
Q Consensus 548 dp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~ 609 (1255)
|||++||+.+.+.+. +++..+. +++|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 158 EPt~~LD~~~~~~l~-~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 158 EPSEGLAPKIVEEIF-EAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CCcccCCHHHHHHHH-HHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 999999999987775 4554443 5899999999999865 58999999999999999877654
No 479
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=99.96 E-value=8.9e-29 Score=288.44 Aligned_cols=163 Identities=27% Similarity=0.404 Sum_probs=134.5
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC-----------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK----------- 506 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~----------- 506 (1255)
.++++|++++|+. .++|+|+||++++|++++|+|||||||||||++|.|.++|.+| .++.
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEE
Confidence 4789999999963 3699999999999999999999999999999999999999888 1111
Q ss_pred ------CCCC--------------CC------------------ccccccCCCcCChHHHHHHHHHHHHccCCCEEEEeC
Q 000845 507 ------MLPF--------------GD------------------LTQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDD 548 (1255)
Q Consensus 507 ------~lp~--------------gd------------------~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDd 548 (1255)
.+|. +. .........+|||||||||+||||+..+|+++||||
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDE 159 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDE 159 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 1111 00 000123456899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 549 PFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 549 p~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
|||+||+.+.+.+.+ .+..+. .++|+|+|||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 160 Pts~LD~~~~~~l~~-~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 160 PLSNLDAALRVQMRI-EISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred CcccCCHHHHHHHHH-HHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999887764 454443 3899999999998765 689999999999999999988764
No 480
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=99.96 E-value=3.9e-29 Score=272.97 Aligned_cols=154 Identities=33% Similarity=0.463 Sum_probs=124.7
Q ss_pred EEEEeeEEEecCCC-CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCCC--------
Q 000845 445 IFIKSADLSWEADL-LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKMLP-------- 509 (1255)
Q Consensus 445 i~~~~~~f~w~~~~-~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~lp-------- 509 (1255)
++++|++++|+... .+++|+|+||++++|++++|+||||||||||+++|+|.++|.+| .++...+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 36889999996421 14799999999999999999999999999999999999999888 1111100
Q ss_pred --------CC-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCC
Q 000845 510 --------FG-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRD 542 (1255)
Q Consensus 510 --------~g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~ 542 (1255)
+. ..| .......+||||||||++||||++.+|+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 160 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARALANDPK 160 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHHccCCC
Confidence 00 000 0123457899999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCEE
Q 000845 543 IYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLPAFDSILLISGGEI 599 (1255)
Q Consensus 543 ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~~aD~Iivl~~G~i 599 (1255)
++||||||++||+.+.+.+. +++..+. +++|+|++||+++.+..||+|++|++|++
T Consensus 161 lllLDEP~~~LD~~~~~~l~-~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 161 IILADEPTGNLDSETGKEVM-ELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred EEEEcCCcccCCHHHHHHHH-HHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999987775 5565554 38999999999998888899999999974
No 481
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=99.96 E-value=5.6e-29 Score=274.45 Aligned_cols=161 Identities=25% Similarity=0.380 Sum_probs=132.0
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccCC-----------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLKM----------- 507 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~~----------- 507 (1255)
++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|.|.++|.+|. ++..
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 468899999963 36999999999999999999999999999999999999998881 1100
Q ss_pred --CCC---------------------CC------------------ccccccCCCcCChHHHHHHHHHHHHccCCCEEEE
Q 000845 508 --LPF---------------------GD------------------LTQIGERGVNLSGGQKQRIQLARALYQDRDIYLL 546 (1255)
Q Consensus 508 --lp~---------------------gd------------------~T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLL 546 (1255)
.|+ +. .........+||||||||++||||+..+|+++||
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llll 157 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPKFLLL 157 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 000 00 0012334578999999999999999999999999
Q ss_pred eCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHh
Q 000845 547 DDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLL 609 (1255)
Q Consensus 547 Ddp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~ 609 (1255)
||||++||+.+.+.+. +++..+. +++|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 158 DEPt~~LD~~~~~~~~-~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 158 DEPFAGVDPIAVQDIQ-KIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred cCCcccCCHHHHHHHH-HHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 9999999999987775 4554443 5899999999998765 58999999999999999988764
No 482
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=99.96 E-value=1.1e-28 Score=274.16 Aligned_cols=161 Identities=35% Similarity=0.509 Sum_probs=132.2
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccC------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLK------------ 506 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~------------ 506 (1255)
++++|++++|+. ++++|+|+||++++|++++|+||||||||||+++|.|.++|.+|. ++.
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 578999999962 247999999999999999999999999999999999999998881 110
Q ss_pred ----------CCCC---------C----------------C--c-------------cccccCCCcCChHHHHHHHHHHH
Q 000845 507 ----------MLPF---------G----------------D--L-------------TQIGERGVNLSGGQKQRIQLARA 536 (1255)
Q Consensus 507 ----------~lp~---------g----------------d--~-------------T~iGe~G~~LSGGQkqRIaLARA 536 (1255)
.+|. + . . ........+||||||||++||||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~a 159 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIARA 159 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHH
Confidence 0000 0 0 0 01123567899999999999999
Q ss_pred HccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHH
Q 000845 537 LYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHL 608 (1255)
Q Consensus 537 ly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el 608 (1255)
++.+|+++||||||++||+.+.+.+. +++..+. .++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 160 l~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 160 LAQQPDLILADEPIASLDPKTSKQVM-DYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 99999999999999999999987775 5555543 3799999999999875 6899999999999999998876
No 483
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.96 E-value=8.3e-29 Score=275.45 Aligned_cols=162 Identities=30% Similarity=0.442 Sum_probs=134.2
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCC-----CC------cccCC------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRL-----QG------MDLKM------ 507 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~-----~G------~Di~~------ 507 (1255)
++++|++++|+. .++++|+||++++||+++|+|+||||||||+++|.|.++|. +| .++..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 678999999964 36999999999999999999999999999999999999887 77 11110
Q ss_pred --------CC--------------------CCC-------------------c----cccccCCCcCChHHHHHHHHHHH
Q 000845 508 --------LP--------------------FGD-------------------L----TQIGERGVNLSGGQKQRIQLARA 536 (1255)
Q Consensus 508 --------lp--------------------~gd-------------------~----T~iGe~G~~LSGGQkqRIaLARA 536 (1255)
.| .+. . ........+||||||||++||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~lara 158 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIARA 158 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHHH
Confidence 00 010 0 11233467899999999999999
Q ss_pred HccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 537 LYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 537 ly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
++.+|+++||||||++||+.+.+.++ +++..+.+++|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 159 l~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 159 LAVEPEVLLLDEPTSALDPIATGKIE-ELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999987765 56666555689999999999875 589999999999999999888753
No 484
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=99.96 E-value=8.3e-29 Score=256.99 Aligned_cols=148 Identities=30% Similarity=0.445 Sum_probs=122.3
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc-------ccCCCCCC----Cc
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM-------DLKMLPFG----DL 513 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~-------Di~~lp~g----d~ 513 (1255)
++++|++++|+.+ +++|+|+||++++|++++|+|+||||||||+++|+|++++.+|. .+..+++. ..
T Consensus 1 i~~~~~~~~~~~~--~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (166)
T cd03223 1 IELENLSLATPDG--RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYLPLG 78 (166)
T ss_pred CEEEEEEEEcCCC--CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCccccc
Confidence 4689999999643 47999999999999999999999999999999999999999981 12122211 11
Q ss_pred ccccc----CCCcCChHHHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCC
Q 000845 514 TQIGE----RGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFD 589 (1255)
Q Consensus 514 T~iGe----~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~~aD 589 (1255)
|.... ....||||||||++||||++++|+++||||||++||+.+.+.+. +++..+ ++|+|++||+++....||
T Consensus 79 tv~~nl~~~~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~~~~~~l~-~~l~~~--~~tiiivsh~~~~~~~~d 155 (166)
T cd03223 79 TLREQLIYPWDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDEESEDRLY-QLLKEL--GITVISVGHRPSLWKFHD 155 (166)
T ss_pred cHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCHHHHHHHH-HHHHHh--CCEEEEEeCChhHHhhCC
Confidence 21111 56789999999999999999999999999999999999988776 455444 699999999998888899
Q ss_pred EEEEEeCC
Q 000845 590 SILLISGG 597 (1255)
Q Consensus 590 ~Iivl~~G 597 (1255)
+|++|++|
T Consensus 156 ~i~~l~~~ 163 (166)
T cd03223 156 RVLDLDGE 163 (166)
T ss_pred EEEEEcCC
Confidence 99999864
No 485
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.7e-28 Score=275.99 Aligned_cols=166 Identities=22% Similarity=0.343 Sum_probs=136.7
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC-----------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK----------- 506 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~----------- 506 (1255)
.++++|++++|+... +++|+|+||++++||+++|+||||||||||+++|.|.++|.+| .++.
T Consensus 7 ~l~i~~l~~~~~~~~-~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSDA-SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 589999999997532 4699999999999999999999999999999999999999888 1110
Q ss_pred ---------CCCC--------------CCc-----c-------------ccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 507 ---------MLPF--------------GDL-----T-------------QIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 507 ---------~lp~--------------gd~-----T-------------~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
.++. +.. . .......+||||||||++||||++.+|+++|
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lll 165 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNPSVII 165 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 0000 000 0 0123457899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
|||||++||+.+.+.++ +++..+. +++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 166 LDEPt~~LD~~~~~~l~-~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 166 LDEATSMLDPDARQNLL-DLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred EeCCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999988776 4555543 37999999999998878999999999999999999887643
No 486
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=99.96 E-value=7.5e-29 Score=286.59 Aligned_cols=162 Identities=35% Similarity=0.480 Sum_probs=134.3
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------ccc-------------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDL------------- 505 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di------------- 505 (1255)
++++|++++|+. .++|+|+||++++||+++|+|||||||||||++|+|+++|.+| .|+
T Consensus 3 L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v 79 (353)
T PRK10851 3 IEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFV 79 (353)
T ss_pred EEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEE
Confidence 789999999964 3699999999999999999999999999999999999999988 111
Q ss_pred ----CCCCC---------C--------Ccc------c-------------cccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 506 ----KMLPF---------G--------DLT------Q-------------IGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 506 ----~~lp~---------g--------d~T------~-------------iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
..+|. + ..+ . ......+|||||||||+||||++.+|+++|
T Consensus 80 ~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~~~P~llL 159 (353)
T PRK10851 80 FQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILL 159 (353)
T ss_pred ecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 11111 0 000 0 123457899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGALS--KKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l~--~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
||||||+||+.+.+.+. +.+..+.+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++..
T Consensus 160 LDEP~s~LD~~~r~~l~-~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 160 LDEPFGALDAQVRKELR-RWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred EeCCCccCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999988775 45555443 789999999999865 589999999999999999998864
No 487
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.96 E-value=5.7e-29 Score=271.78 Aligned_cols=160 Identities=36% Similarity=0.443 Sum_probs=128.7
Q ss_pred EEEEeeEEEecCCC-CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccC-------CCCC
Q 000845 445 IFIKSADLSWEADL-LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLK-------MLPF 510 (1255)
Q Consensus 445 i~~~~~~f~w~~~~-~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~-------~lp~ 510 (1255)
++++|++++|+... .+++|+|+||+|++|++++|+||||||||||+++|+|.++|.+|. ++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 36889999996421 147999999999999999999999999999999999999998881 110 0010
Q ss_pred C-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcCC
Q 000845 511 G-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPFS 551 (1255)
Q Consensus 511 g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~S 551 (1255)
. ..| .......+||||||||++||||++.+|+++||||||+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~ 160 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDPDVLLLDEPFS 160 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 0 000 1123457899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEe--CCEEEEecCh
Q 000845 552 ALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLIS--GGEIIQAATY 605 (1255)
Q Consensus 552 aLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~--~G~i~~~G~~ 605 (1255)
+||+.+.+.+++ ++..+. .++|+|++||+++.+. .||+|++|+ +|++++.++.
T Consensus 161 ~LD~~~~~~~~~-~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 161 ALDALTREQLQE-ELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCHHHHHHHHH-HHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999887764 554442 3899999999999765 689999999 7999988764
No 488
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.96 E-value=1.2e-28 Score=273.65 Aligned_cols=162 Identities=30% Similarity=0.458 Sum_probs=132.8
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCCc------ccCC-----------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQGM------DLKM----------- 507 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G~------Di~~----------- 507 (1255)
++++|++++|+.+ +++|+|+||++++|++++|+||||||||||+++|.|.++|.+|. ++..
T Consensus 1 l~~~~l~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPNG--KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCCc--cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 3688999999641 47999999999999999999999999999999999999988871 1110
Q ss_pred -----------CCC----------------------C---C--c-------------cccccCCCcCChHHHHHHHHHHH
Q 000845 508 -----------LPF----------------------G---D--L-------------TQIGERGVNLSGGQKQRIQLARA 536 (1255)
Q Consensus 508 -----------lp~----------------------g---d--~-------------T~iGe~G~~LSGGQkqRIaLARA 536 (1255)
++. + + . ......+.+||||||||++||||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~a 158 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRADQLSGGQQQRVAIARA 158 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcccCCHHHHHHHHHHHH
Confidence 000 0 0 0 01123567899999999999999
Q ss_pred HccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHh
Q 000845 537 LYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLL 609 (1255)
Q Consensus 537 ly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~ 609 (1255)
+..+|+++|||||||+||+.+.+.+++ .+..+. .|+|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 159 l~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 159 LMQQPKLILADEPVASLDPASSRQVMD-LLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 999999999999999999999887764 554443 3899999999999987 68999999999999999988763
No 489
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=99.96 E-value=1.3e-28 Score=253.44 Aligned_cols=165 Identities=31% Similarity=0.463 Sum_probs=139.8
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCCC--------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKMLP-------- 509 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~lp-------- 509 (1255)
-.+++|++..|.. ..+|+++||++++||+++++|+||+||||||++|.|..++.+| .|+..+|
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3578899999975 4799999999999999999999999999999999999999877 4443332
Q ss_pred -----CCCc---------------------------------------cccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 510 -----FGDL---------------------------------------TQIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 510 -----~gd~---------------------------------------T~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
+|.. .....++.+|||||+|-+|+||||.++|+++|
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~PklLL 159 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPKLLL 159 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCCEEE
Confidence 1110 11245789999999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCc-cccCCEEEEEeCCEEEEecChhHHhhcc
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGALS--KKTVLLVTHQVDF-LPAFDSILLISGGEIIQAATYDHLLVTS 612 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l~--~kTvIlvTH~l~~-l~~aD~Iivl~~G~i~~~G~~~el~~~~ 612 (1255)
||||+.+|-|...+.||+. +..+.+ +-|++||-++..+ ++.+|+.+||++|+|+..|+.+++....
T Consensus 160 LDEPs~GLaP~iv~~I~~~-i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 160 LDEPSEGLAPKIVEEIFEA-IKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred ecCCccCcCHHHHHHHHHH-HHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 9999999999999999854 555543 5699999999987 5678999999999999999999997653
No 490
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=99.96 E-value=5.6e-29 Score=270.70 Aligned_cols=155 Identities=26% Similarity=0.384 Sum_probs=126.6
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCC----------C
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKM----------L 508 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~----------l 508 (1255)
++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|.++|.+| .++.. +
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEE
Confidence 468899999964 3799999999999999999999999999999999999999888 11110 0
Q ss_pred CCC-----Cc----------------------------------cccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCc
Q 000845 509 PFG-----DL----------------------------------TQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDP 549 (1255)
Q Consensus 509 p~g-----d~----------------------------------T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp 549 (1255)
|+. .. ........+||||||||++||||++.+|+++|||||
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEP 157 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEP 157 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 000 00 011234568999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEec
Q 000845 550 FSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAA 603 (1255)
Q Consensus 550 ~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G 603 (1255)
|++||+.+.+.+.+ ++..+. .++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 158 t~~LD~~~~~~l~~-~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 158 LSNLDAKLRVQMRA-ELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred cccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999887764 554443 3899999999999876 58999999999998765
No 491
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=99.96 E-value=5.9e-29 Score=270.99 Aligned_cols=153 Identities=29% Similarity=0.435 Sum_probs=124.3
Q ss_pred EEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCC-----------
Q 000845 445 IFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKM----------- 507 (1255)
Q Consensus 445 i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~----------- 507 (1255)
++++|++++|+.. .+++|+|+||++++|++++|+||||||||||+++|.|.++|.+| .++..
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6789999999643 23699999999999999999999999999999999999999888 11110
Q ss_pred ----CCCC-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCEE
Q 000845 508 ----LPFG-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDIY 544 (1255)
Q Consensus 508 ----lp~g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~il 544 (1255)
.|+. +.| .......+||||||||++||||++.+|+++
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALPMQLSGGEQQRVAIARAIVHKPPLL 160 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 0000 000 012245689999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCccc-cCCEEEEEeCCEE
Q 000845 545 LLDDPFSALDAKTAKFLFTEYVMGA-LSKKTVLLVTHQVDFLP-AFDSILLISGGEI 599 (1255)
Q Consensus 545 LLDdp~SaLD~~~~~~i~~~~i~~~-l~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i 599 (1255)
||||||++||+.+.+.+.+ .+..+ .+++|+|++||+++.+. .||+|++|++|++
T Consensus 161 llDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 161 LADEPTGNLDPELSRDIMR-LFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred EEeCCCCcCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999887764 55544 34899999999999886 5899999999974
No 492
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.96 E-value=9.2e-29 Score=277.54 Aligned_cols=166 Identities=27% Similarity=0.402 Sum_probs=136.4
Q ss_pred eEEEEeeEEEecCC------CCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC-----
Q 000845 444 SIFIKSADLSWEAD------LLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK----- 506 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~------~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~----- 506 (1255)
.++++|++++|+.. .++++|+|+||++++||+++|+|+||||||||+++|.|.++|.+| .++.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999642 135799999999999999999999999999999999999999888 1110
Q ss_pred ------------------CCCCCCcc------------------------------------ccccCCCcCChHHHHHHH
Q 000845 507 ------------------MLPFGDLT------------------------------------QIGERGVNLSGGQKQRIQ 532 (1255)
Q Consensus 507 ------------------~lp~gd~T------------------------------------~iGe~G~~LSGGQkqRIa 532 (1255)
.++. +.| .....+.+||||||||++
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~-~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~ 160 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNP-RMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRIN 160 (265)
T ss_pred HHHHHhhceEEEecChhhhcCC-CCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHH
Confidence 0110 000 012345789999999999
Q ss_pred HHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHh
Q 000845 533 LARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLL 609 (1255)
Q Consensus 533 LARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~ 609 (1255)
||||++++|+++||||||++||+.+.+.+. +++..+. .++|+|++||+++.+. .||++++|++|++++.|+.+++.
T Consensus 161 laral~~~p~illLDEPt~~LD~~~~~~l~-~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 161 IARALAVKPKLIVLDEAVSNLDMVLQAVIL-ELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHc
Confidence 999999999999999999999999977665 5565543 3899999999999986 58999999999999999999987
Q ss_pred hc
Q 000845 610 VT 611 (1255)
Q Consensus 610 ~~ 611 (1255)
..
T Consensus 240 ~~ 241 (265)
T TIGR02769 240 SF 241 (265)
T ss_pred CC
Confidence 53
No 493
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1e-28 Score=277.88 Aligned_cols=162 Identities=27% Similarity=0.400 Sum_probs=133.1
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC-----------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK----------- 506 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~----------- 506 (1255)
.++++|++++|+.. +++|+|+||++++||+++|+|+||||||||+++|.|.++|.+| .++.
T Consensus 4 ~l~~~~l~~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKDG--TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCCC--CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 58899999999632 4699999999999999999999999999999999999999988 1110
Q ss_pred -CCCCCC------cc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 507 -MLPFGD------LT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 507 -~lp~gd------~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
..++.. .| ........||||||||++||||+..+|+++|
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~lll 161 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIV 161 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 001000 00 0112346899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChhHH
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGA-LSKKTVLLVTHQVDFL-PAFDSILLISGGEIIQAATYDHL 608 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~-l~~kTvIlvTH~l~~l-~~aD~Iivl~~G~i~~~G~~~el 608 (1255)
|||||++||+.+.+.+. +++..+ .+|+|+|++||+++.+ +.||+|++|++|++++.|+.+++
T Consensus 162 lDEPt~~LD~~~~~~l~-~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 162 LDEPMAYLDPRGQETLM-EILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred EECCCcCCCHHHHHHHH-HHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999988775 555544 3489999999999987 46999999999999999998654
No 494
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.8e-28 Score=276.38 Aligned_cols=167 Identities=29% Similarity=0.388 Sum_probs=137.7
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCC---------
Q 000845 443 HSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKM--------- 507 (1255)
Q Consensus 443 ~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~--------- 507 (1255)
..++++|++++|+.. .+++|+|+||+|++||+++|+|+||||||||+++|.|.++|.+| .++..
T Consensus 4 ~~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13635 4 EIIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQ 82 (279)
T ss_pred ceEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhh
Confidence 358999999999642 24799999999999999999999999999999999999999988 11110
Q ss_pred ---CCCC------Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCCEE
Q 000845 508 ---LPFG------DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRDIY 544 (1255)
Q Consensus 508 ---lp~g------d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~il 544 (1255)
.++. ..| .+.....+||||||||++||||+..+|+++
T Consensus 83 i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 162 (279)
T PRK13635 83 VGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQPDII 162 (279)
T ss_pred eEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 0000 000 122345689999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHhhhc-C-CcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 545 LLDDPFSALDAKTAKFLFTEYVMGAL-S-KKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 545 LLDdp~SaLD~~~~~~i~~~~i~~~l-~-~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
||||||++||+.+.+.++ +++..+. + ++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 163 lLDEPt~gLD~~~~~~l~-~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 163 ILDEATSMLDPRGRREVL-ETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred EEeCCcccCCHHHHHHHH-HHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999988776 4555544 2 8999999999998888999999999999999998887643
No 495
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=99.96 E-value=1.2e-28 Score=275.37 Aligned_cols=164 Identities=26% Similarity=0.408 Sum_probs=134.0
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCC-----CCCC------cccCC----
Q 000845 443 HSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELP-----RLQG------MDLKM---- 507 (1255)
Q Consensus 443 ~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~-----~~~G------~Di~~---- 507 (1255)
..++++|++++|+. +++|+|+||++++||+++|+|+||||||||+++|.|.++ +.+| .++..
T Consensus 5 ~~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 35899999999963 369999999999999999999999999999999999864 4566 11110
Q ss_pred ----------CCC--------------------C--C---------------------ccccccCCCcCChHHHHHHHHH
Q 000845 508 ----------LPF--------------------G--D---------------------LTQIGERGVNLSGGQKQRIQLA 534 (1255)
Q Consensus 508 ----------lp~--------------------g--d---------------------~T~iGe~G~~LSGGQkqRIaLA 534 (1255)
+|+ + + .+.......+|||||||||+||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~la 161 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCIA 161 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHH
Confidence 000 0 0 0012334678999999999999
Q ss_pred HHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 535 RALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 535 RAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
||++.+|+++||||||++||+.+.+.+. +.+..+.+++|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 162 ral~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 237 (253)
T PRK14242 162 RALAVEPEVLLMDEPASALDPIATQKIE-ELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIFT 237 (253)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 9999999999999999999999987775 56655556899999999999885 589999999999999999888753
No 496
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.96 E-value=1.1e-28 Score=273.14 Aligned_cols=163 Identities=28% Similarity=0.402 Sum_probs=134.3
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCC---------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKML--------- 508 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~l--------- 508 (1255)
.++++|++++|+. +++|+|+||++++|++++|+||||||||||+++|+|.++|.+| .|+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4789999999963 4699999999999999999999999999999999999999888 111100
Q ss_pred ---C--------------------CCCc---------------cccccCCCcCChHHHHHHHHHHHHccCCCEEEEeCcC
Q 000845 509 ---P--------------------FGDL---------------TQIGERGVNLSGGQKQRIQLARALYQDRDIYLLDDPF 550 (1255)
Q Consensus 509 ---p--------------------~gd~---------------T~iGe~G~~LSGGQkqRIaLARAly~~~~ilLLDdp~ 550 (1255)
| .+.. ........+||||||||++||||++.+|+++||||||
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt 159 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEPT 159 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 0 0000 0112345789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChhHHhh
Q 000845 551 SALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAATYDHLLV 610 (1255)
Q Consensus 551 SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G~~~el~~ 610 (1255)
++||+.+.+.+. +++..+. .|+|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 160 ~~LD~~~~~~l~-~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 160 SALDPTSTEIIE-ELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred ccCCHHHHHHHH-HHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 999999987665 5555543 3899999999999876 589999999999999999888764
No 497
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=99.96 E-value=9.6e-29 Score=270.45 Aligned_cols=155 Identities=30% Similarity=0.466 Sum_probs=126.4
Q ss_pred EEEEeeEEEecCCC-CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCCC---------
Q 000845 445 IFIKSADLSWEADL-LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKML--------- 508 (1255)
Q Consensus 445 i~~~~~~f~w~~~~-~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~l--------- 508 (1255)
++++|++++|+... ..++|+|+||++++|++++|+||||||||||+++|.|.++|.+| .++..+
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 67899999996422 24699999999999999999999999999999999999999888 111100
Q ss_pred -------CCC-----Ccc----------------------------------ccccCCCcCChHHHHHHHHHHHHccCCC
Q 000845 509 -------PFG-----DLT----------------------------------QIGERGVNLSGGQKQRIQLARALYQDRD 542 (1255)
Q Consensus 509 -------p~g-----d~T----------------------------------~iGe~G~~LSGGQkqRIaLARAly~~~~ 542 (1255)
++. ..| .......+||||||||++||||++.+|+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 161 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRPSELSGGERQRVAIARALVNQPS 161 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCC
Confidence 000 000 0123457899999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCEEE
Q 000845 543 IYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLPAFDSILLISGGEII 600 (1255)
Q Consensus 543 ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~~aD~Iivl~~G~i~ 600 (1255)
++||||||++||+.+.+.+. +++..+. .++|+|++||+++.+..+|+|++|++|+++
T Consensus 162 illlDEPt~~LD~~~~~~l~-~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 162 LVLADEPTGNLDNNNAKIIF-DLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred EEEEeCCCCcCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999987775 5555543 379999999999998889999999999975
No 498
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=99.96 E-value=7.9e-29 Score=288.87 Aligned_cols=164 Identities=30% Similarity=0.448 Sum_probs=135.9
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccC-----------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLK----------- 506 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~----------- 506 (1255)
.++++|++++|+. +++|+|+||++++||+++|+|||||||||||++|.|.++|.+| .++.
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4789999999963 4799999999999999999999999999999999999999988 0100
Q ss_pred ----------------------CCCC----C-----Cccc-------------cccCCCcCChHHHHHHHHHHHHccCCC
Q 000845 507 ----------------------MLPF----G-----DLTQ-------------IGERGVNLSGGQKQRIQLARALYQDRD 542 (1255)
Q Consensus 507 ----------------------~lp~----g-----d~T~-------------iGe~G~~LSGGQkqRIaLARAly~~~~ 542 (1255)
..|. + +... ......+||||||||++||||++++|+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~~LSgGerQRv~IArAL~~~P~ 159 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVTSLSGGERQRVLLARALAQATP 159 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 0000 0 0000 123456899999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 543 IYLLDDPFSALDAKTAKFLFTEYVMGAL-SKKTVLLVTHQVDFL-PAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 543 ilLLDdp~SaLD~~~~~~i~~~~i~~~l-~~kTvIlvTH~l~~l-~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
++||||||++||+.+...+. ++++.+. +++|+|++||+++.+ +.||+|++|++|++++.|++++++..
T Consensus 160 iLLLDEPtsgLD~~~~~~l~-~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 160 VLLLDEPTASLDINHQVRTL-ELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred EEEEECCcccCCHHHHHHHH-HHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 99999999999999987775 5555543 589999999999998 46899999999999999999998743
No 499
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=99.96 E-value=1.1e-28 Score=283.11 Aligned_cols=169 Identities=25% Similarity=0.393 Sum_probs=138.2
Q ss_pred cceEEEEeeEEEecCCC----------CCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------ccc
Q 000845 442 EHSIFIKSADLSWEADL----------LNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDL 505 (1255)
Q Consensus 442 ~~~i~~~~~~f~w~~~~----------~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di 505 (1255)
+..++++|++++|+... ..++++|+||+|++||+++|+|+||||||||+++|+|.+++.+| .|+
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 35689999999996421 24689999999999999999999999999999999999999888 111
Q ss_pred C------------------------CCCCC---------------Ccc--------------------ccccCCCcCChH
Q 000845 506 K------------------------MLPFG---------------DLT--------------------QIGERGVNLSGG 526 (1255)
Q Consensus 506 ~------------------------~lp~g---------------d~T--------------------~iGe~G~~LSGG 526 (1255)
. ..|.. +.+ .......+||||
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG 165 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGG 165 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHH
Confidence 1 01100 000 112345789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEec
Q 000845 527 QKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGAL--SKKTVLLVTHQVDFLP-AFDSILLISGGEIIQAA 603 (1255)
Q Consensus 527 QkqRIaLARAly~~~~ilLLDdp~SaLD~~~~~~i~~~~i~~~l--~~kTvIlvTH~l~~l~-~aD~Iivl~~G~i~~~G 603 (1255)
|||||+||||++.+|+++|+|||||+||+.+.+.+.+ ++..+. .+.|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 166 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~-lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g 244 (331)
T PRK15079 166 QCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVN-LLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELG 244 (331)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEc
Confidence 9999999999999999999999999999999988864 555543 3899999999999986 48999999999999999
Q ss_pred ChhHHhhc
Q 000845 604 TYDHLLVT 611 (1255)
Q Consensus 604 ~~~el~~~ 611 (1255)
+.+++...
T Consensus 245 ~~~~i~~~ 252 (331)
T PRK15079 245 TYDEVYHN 252 (331)
T ss_pred CHHHHHcC
Confidence 99998754
No 500
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.5e-28 Score=277.28 Aligned_cols=167 Identities=28% Similarity=0.350 Sum_probs=137.6
Q ss_pred eEEEEeeEEEecCCCCCCccccceeeeeCCcEEEEEccCCCCHHHHHHHHhccCCCCCC------cccCC----------
Q 000845 444 SIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------MDLKM---------- 507 (1255)
Q Consensus 444 ~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~IvG~~GsGKSTLL~~llGe~~~~~G------~Di~~---------- 507 (1255)
.++++|++++|+.....++|+|+||++++||+++|+|+||||||||+++|+|.++|.+| .++..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 58899999999753334699999999999999999999999999999999999999988 11100
Q ss_pred ----------CCC--------------CCc------------------cccccCCCcCChHHHHHHHHHHHHccCCCEEE
Q 000845 508 ----------LPF--------------GDL------------------TQIGERGVNLSGGQKQRIQLARALYQDRDIYL 545 (1255)
Q Consensus 508 ----------lp~--------------gd~------------------T~iGe~G~~LSGGQkqRIaLARAly~~~~ilL 545 (1255)
++. +.. -........||||||||++||||+..+|+++|
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~p~lll 163 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALRPEIII 163 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 000 000 00123457899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCccccCCEEEEEeCCEEEEecChhHHhhc
Q 000845 546 LDDPFSALDAKTAKFLFTEYVMGALS--KKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHLLVT 611 (1255)
Q Consensus 546 LDdp~SaLD~~~~~~i~~~~i~~~l~--~kTvIlvTH~l~~l~~aD~Iivl~~G~i~~~G~~~el~~~ 611 (1255)
|||||++||+.+.+.+. +++..+.+ |+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 164 lDEPt~~LD~~~~~~l~-~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 164 LDESTSMLDPTGRQEIM-RVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred EeCCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999988775 45555433 8999999999999888999999999999999999887643
Done!