Query 000845
Match_columns 1255
No_of_seqs 326 out of 5187
Neff 8.4
Searched_HMMs 29240
Date Tue Mar 26 17:17:14 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000845.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_614-618//hhsearch_pdb/000845hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1545.0 110.4 1168 69-1247 1-1317(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1257.1 100.7 1113 123-1248 44-1272(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 788.2 65.7 515 724-1247 137-654 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 733.4 52.2 514 724-1246 109-625 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 699.5 58.9 560 675-1248 26-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 697.4 64.7 565 670-1246 7-578 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 685.1 58.4 559 675-1245 3-575 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 678.8 69.0 559 674-1246 13-579 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 676.7 70.6 559 674-1246 13-579 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 672.9 64.5 561 676-1247 9-584 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1545.04 Aligned_cols=1168 Identities=18% Similarity=0.213 Sum_probs=889.9
Q ss_pred HHHHHC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-----------CCCCCHHHHHHHHHH----HHHHHHHH
Q ss_conf 998104-57878899969992172889999999998762203-----------999980589999999----88889999
Q 000845 69 LMKKGK-DKVLEDIDVPQLRLADRATTCYSLFIEELNDWNQK-----------RPSAHPSILRALISC----HWKSILFS 132 (1255)
Q Consensus 69 l~~~g~-~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~~-----------~~~~~~~l~~~l~~~----~~~~~~~~ 132 (1255)
+++.|. +++|+..|.+.+.++|..+...+.+...|.....+ ++..++--++.+|+. -+.-++++
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf 98773100687635445679501110000113454243554334310012232025687799997315676789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------------C-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999722676---------------3-----035799999999999999999999999999
Q 000845 133 GFFALIKVISISAGPLFLKAFISAAEGEI---------------I-----FKYEIYSLAISLFLVKCVESLAGRHWFFQS 192 (1255)
Q Consensus 133 ~~~~~~~~~~~~~~p~ll~~li~~~~~~~---------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1255)
.++.++..++.++.+++++.+++.+.... . .......++..+++..+...++.....+..
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999843991121468954899999978999975788-9999999999999999999989769999
Q 000845 193 RLTGLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPF-WFHQIWSTSLQLCIAVVVVYYSVGLATI 271 (1255)
Q Consensus 193 ~~~~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~i~~~~l~~~lg~~~l 271 (1255)
..++.|+...++..+|+|.++++....+..++|+++|+++.|++++.+++. .+..++..++.++.+++++++.-+..++
T Consensus 161 ~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~l 240 (1321)
T 4f4c_A 161 LYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLTL 240 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889899879984899999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999943599998582399999999999999999999999999
Q 000845 272 ATLIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYGWLKVLQLQKG 351 (1255)
Q Consensus 272 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~Ik~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~ 351 (1255)
+.++++++..++..++++...+..++.++..+++.+.++|.++|||+||+|+||+.+.+++.+..++..+...+.....+
T Consensus 241 v~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1321)
T 4f4c_A 241 VMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLG 320 (1321)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999983999998214299999999999999999999999999
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 9999998998--99999999999882898797799999999999999999999999999999999999999826999998
Q 000845 352 YYMVLFWSSP--ILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIANFLEAPELQN 429 (1255)
Q Consensus 352 ~~~~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~ 429 (1255)
.......... .++..++++.+.+..+.++++.+|+++.++..+..|+.+++..+..+.++.+|++||++|++.++..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 400 (1321)
T 4f4c_A 321 ISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVID 400 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999999599869999999999999999999899999999999999999999971785345
Q ss_pred CCHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCC-------
Q ss_conf 3000024433575449999548970689999841021146508968999926999978999999646888789-------
Q 000845 430 SDMQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPRLQG------- 502 (1255)
Q Consensus 430 ~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~ivG~~GsGKSTLl~~llGe~~~~~G------- 502 (1255)
...+......+..+.|+++|++|+||..++.|+|+|+||++++|++++|||++|||||||+++|+|+|++.+|
T Consensus 401 ~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G~I~idG~ 480 (1321)
T 4f4c_A 401 SSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGV 480 (1321)
T ss_dssp CSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEEEEEETTE
T ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 66655656778887679998554079999874333318862288278998058985778888754565164486157996
Q ss_pred ------------------------------------------------------CCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf ------------------------------------------------------65677888985302468776793899
Q 000845 503 ------------------------------------------------------MDLKMLPFGDLTQIGERGVNLSGGQK 528 (1255)
Q Consensus 503 ------------------------------------------------------~Dl~~lp~Gd~T~iGe~G~~LSGGQk 528 (1255)
.|++.||+||+|+|||+|.+||||||
T Consensus 481 ~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQk 560 (1321)
T 4f4c_A 481 DVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQK 560 (1321)
T ss_dssp ETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCCHHHH
T ss_pred CCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHHHH
T ss_conf 50112599985046665875332078616788641552209999999987565468870888886075589887777787
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999703999789807678879998999999999562299589998269894123788999939889881382578
Q 000845 529 QRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGEIIQAATYDHL 608 (1255)
Q Consensus 529 qRIaLARAly~~~~I~LLDdp~SalD~~~~~~i~~~~i~~~l~~kTvIlvTH~~~~l~~aD~Iivl~~G~i~~~Gt~~el 608 (1255)
|||+||||+|+||+|+||||||||||++++ +++++++.+++++||+|+|||++++++.||+|++|++|+|+++|+|+||
T Consensus 561 QRiaiARAl~~~~~IliLDE~tSaLD~~te-~~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gth~eL 639 (1321)
T 4f4c_A 561 QRIAIARALVRNPKILLLDEATSALDAESE-GIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRAL 639 (1321)
T ss_dssp HHHHHHHHHTTCCSEEEEESTTTTSCTTTH-HHHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHH-HHHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECCCCHHHH
T ss_conf 999999987259998998455446887899-9999999998479889997363878986898999639965136899999
Q ss_pred HHCCHHHHHHHHHHHHCCC------C-CCCCCCCC----CCC-C---HHHHCCC----CCC------------CCCC--C
Q ss_conf 6211479999997431389------9-76565578----854-2---0000001----234------------8899--9
Q 000845 609 LVTSQEFQDLVNAHKETMG------P-ETFGEHVS----SKE-D---ENEVKKV----EDE------------GHNN--T 655 (1255)
Q Consensus 609 ~~~~~~~~~l~~~~~~~~~------~-~~~~~~~~----~~~-~---~~~~~~~----~~~------------~~~~--~ 655 (1255)
+..++.|.++++.+..... . ....+... ..+ . ..+.+.. ... .... .
T Consensus 640 ~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1321)
T 4f4c_A 640 MAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITNGPVIDEKEERIG 719 (1321)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHCC--------------------------------------------------CCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHCC
T ss_conf 98532799999962212222332334433223211122222342222222110221110132124567740257775315
Q ss_pred CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-H---HCCCCC---CCHHHHHHH
Q ss_conf 986022158776309976354899873134237899999999999999999999996-5---158888---880378999
Q 000845 656 SPADQLIKKEERETGDTGLKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIA-T---YIPSTS---ISRLKLVIV 728 (1255)
Q Consensus 656 ~~~~~~~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~---~~~~~~---~~~~~~~~~ 728 (1255)
........++.++.+......++.|......++.+.+.+++.++.........+|+. | ...++. ....+|.++
T Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1321)
T 4f4c_A 720 KDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALM 799 (1321)
T ss_dssp CCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 40389999999970786310999999987789999999999999999999999999999987517934556678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999984498432013--344303887710146865676898999999
Q 000845 729 YSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDS--TPVGRILSRVSSDLSIIDLDLSIKSTIAVG 806 (1255)
Q Consensus 729 ~~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ff~~--~~~G~il~r~s~D~~~id~~~~~~l~~~~~ 806 (1255)
|.+++++..++.+.+.+++.+.+.+++.++|.+++++++++|++|||. +|+|+++||+++|++.+|..++..+..++.
T Consensus 800 ~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~ 879 (1321)
T 4f4c_A 800 FLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVIT 879 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999998887349933321678884888850250599999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHH
Q ss_conf 99999999999998868999999999999999999999999999999978421999999999703699997172999999
Q 000845 807 TTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFA 886 (1255)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~ 886 (1255)
.++.+++.++++++.+|.++++++++++++++....+.+..+..........+....++.|++.|+.+||+|++|+++.+
T Consensus 880 ~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~ 959 (1321)
T 4f4c_A 880 TLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYE 959 (1321)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHH
T ss_pred HHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 86537777022137868999999998889999999999999999999999988898899999962798886141488999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998999999999999999999999-98732586--6587999999999999999999999999
Q 000845 887 KNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALC-TTLLHKGH--KGAGYTGMALSFGLSLNDFLVYSVNNQC 963 (1255)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~w~~~~l~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~g~~l~~~~~l~~~l~~~~~~~~ 963 (1255)
++.+..+...+..+.......+.......+..+......++ ..+...+. .+++.+...+.+.......+..+...+.
T Consensus 960 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 1039 (1321)
T 4f4c_A 960 NFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFP 1039 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999987578875376542147899999999877889999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCEEEEEEEEEECCCEEEEECCCCC
Q ss_conf 996456499999998429998963224799999999986089998999957999-9402112589748949999948999
Q 000845 964 IVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNA-PLVLRGITCTFEGGHKIGVVGRTGS 1042 (1255)
Q Consensus 964 ~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvsf~Y~~~~-~~vL~~isl~I~~Ge~vaIVGrsGs 1042 (1255)
.++..+.+++|+.++.+.+++.+. ...+++.||..|.|+|+||+|+|+.+. .+||+|+||+|+|||+|||||||||
T Consensus 1040 ~~~~~~~a~~ri~~~l~~~~~~~~---~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGs 1116 (1321)
T 4f4c_A 1040 EYAKATFAGGIIFGMLRKISKIDS---LSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGC 1116 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSCT---TCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCC---CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCC
T ss_conf 999999999989998607665777---66778788888818999879857999988212451699889899999899998
Q ss_pred CHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHCCCCHHH
Q ss_conf 489999998425889987899969738999947864141787168755777522215669---99996889840595259
Q 000845 1043 GKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPL---SQFTDQEIWEVTIPSQV 1119 (1255)
Q Consensus 1043 GKSTL~~~L~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~VpQ~p~LF~gTIr~NLdp~---~~~sd~ei~~~~~~~~a 1119 (1255)
|||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||..+ .+++|+|+|+ |
T Consensus 1117 GKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~------A 1190 (1321)
T 4f4c_A 1117 GKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEE------A 1190 (1321)
T ss_dssp STTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHH------H
T ss_pred HHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHH------H
T ss_conf 1999999995686389978999999865499999985459987899732723999974549999999999999------9
Q ss_pred HHHCCHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 97624799999631386300007999889249999999999815999399866888999997999999999874993899
Q 000845 1120 LEKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVI 1199 (1255)
Q Consensus 1120 l~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDEaTS~lD~~te~~I~~~l~~~~~~~TvI 1199 (1255)
+++++++++|.++|+||||.|+|+|.|||||||||||||||++|+|+|||||||||+||++||+.||++|++.+++||+|
T Consensus 1191 l~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI 1270 (1321)
T 4f4c_A 1191 ARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCI 1270 (1321)
T ss_dssp HHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEE
T ss_pred HHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99829849997176789998238891569999999999999971799899968111578999999999999973999899
Q ss_pred EECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHH
Q ss_conf 862691113111989999598798976933886219918999999998
Q 000845 1200 TVAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1200 ~IaHrl~ti~~~DrI~vl~~G~ive~g~~~~Ll~~~~~~f~~l~~~~~ 1247 (1255)
+||||++|+.+||+|+|||+|+|+|+|+|+||+++ +|.|++|++...
T Consensus 1271 ~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~-~g~y~~L~~~Q~ 1317 (1321)
T 4f4c_A 1271 VIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE-KGAYYKLTQKQM 1317 (1321)
T ss_dssp EECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHC-C-----------
T ss_pred EECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHH
T ss_conf 96068999996999999989899998888999849-809999999998
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1257.07 Aligned_cols=1113 Identities=17% Similarity=0.196 Sum_probs=828.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------------------CHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9988889999999999999999999999999997226763-------------------035799999999999999999
Q 000845 123 SCHWKSILFSGFFALIKVISISAGPLFLKAFISAAEGEII-------------------FKYEIYSLAISLFLVKCVESL 183 (1255)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~ 183 (1255)
+..|..++++.++.++..++..+.|++++.+++.+..... .......++..+++..++..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1284)
T 3g5u_A 44 WLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLI 123 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999999999999999999999998613444332222221111100244688999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999998439911214689548999999789999757889-999999999999999999
Q 000845 184 AGRHWFFQSRLTGLKIRSSLCAAISSKQLRLSNAAKMMHTSGDIVNYVTVDAYRIGEFPFW-FHQIWSTSLQLCIAVVVV 262 (1255)
Q Consensus 184 ~~~~~~~~~~~~~~~~r~~l~~~iy~K~l~l~~~~~~~~~~g~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~i~~~~l 262 (1255)
+.....+...+.+.++-..++..+|+|.++++....+..++|+++|.++.|++.+.+.... +..+....+.++.+++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~ 203 (1284)
T 3g5u_A 124 VAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIG 203 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999998699899756887789999998899999999999999999999999999999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 989769-9999999999999999999999999999999999999999999994359999858239999999999999999
Q 000845 263 YYSVGL-ATIATLIVMILTVLGNSPLAKLQHKYQETFMTAQNKRLKAITEVLVNMKVLKLYAWDSYFKNVIEKLRSEEYG 341 (1255)
Q Consensus 263 ~~~lg~-~~l~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~Ik~IK~~~wE~~~~~~i~~~R~~E~~ 341 (1255)
+. +.| .+++.+++++++..+..++.+...+..++.++..++..+...|.++||++||.|++|+.+.+++.+.-++-.+
T Consensus 204 ~~-~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~ 282 (1284)
T 3g5u_A 204 FT-RGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKR 282 (1284)
T ss_dssp HH-TTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 99-98999999999999999999999999999999999999999999999997879999846539999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998--9989999999999988289879779999999999999999999999999999999999999
Q 000845 342 WLKVLQLQKGYYMVLFW--SSPILIGAATLLTCYFLGIPLNPSNVFTFLATLRILQEPIRLLPDVFGAFIEAKVSLDRIA 419 (1255)
Q Consensus 342 ~l~~~~~~~~~~~~~~~--~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~ 419 (1255)
...+.....+....+.. .....+..++++.+.+..+.++++.+++++..+.....|+..+...+..+.++..+.+|+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~ 362 (1284)
T 3g5u_A 283 LGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVF 362 (1284)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999929988999999999999999999999999999999999999999
Q ss_pred HHHCCCCCCCCCHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCC
Q ss_conf 98269999983000024433575449999548970689999841021146508968999926999978999999646888
Q 000845 420 NFLEAPELQNSDMQQVCSRAELEHSIFIKSADLSWEADLLNPTLRNINLEVKPAEKFAICGEVGAGKSTLLAAILGELPR 499 (1255)
Q Consensus 420 ~fL~~~e~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~L~~inl~i~~G~l~~ivG~~GsGKSTLl~~llGe~~~ 499 (1255)
++++.++..+..........+..+.|+++|++|+|+.+++.++|+|+||++++|+.++|+|++|||||||+++|+|++++
T Consensus 363 ~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g~~~~ 442 (1284)
T 3g5u_A 363 KIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDP 442 (1284)
T ss_dssp HTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTTSSCC
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCC
T ss_conf 99728986776665677777777718999989976999987101254589759988999899999799999998078899
Q ss_pred CCC-------------------------------------------------------------CCCCCCCCCCCCCCCC
Q ss_conf 789-------------------------------------------------------------6567788898530246
Q 000845 500 LQG-------------------------------------------------------------MDLKMLPFGDLTQIGE 518 (1255)
Q Consensus 500 ~~G-------------------------------------------------------------~Dl~~lp~Gd~T~iGe 518 (1255)
.+| .++..+|+|++|.+||
T Consensus 443 ~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~ 522 (1284)
T 3g5u_A 443 LDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDTLVGE 522 (1284)
T ss_dssp SEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGGCCCSS
T ss_pred CCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCC
T ss_conf 97389999998775799999865489868875377669999745798999999999999829699997465633450147
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCE
Q ss_conf 87767938999999999970399978980767887999899999999956229958999826989412378899993988
Q 000845 519 RGVNLSGGQKQRIQLARALYQDRDIYLLDDPFSALDAKTAKFLFTEYVMGALSKKTVLLVTHQVDFLPAFDSILLISGGE 598 (1255)
Q Consensus 519 ~G~~LSGGQkqRIaLARAly~~~~I~LLDdp~SalD~~~~~~i~~~~i~~~l~~kTvIlvTH~~~~l~~aD~Iivl~~G~ 598 (1255)
+|.+|||||||||+||||+|++|+|+||||||||||+++++ .+++++....+++|+|+|||+++++..||+|++|++|+
T Consensus 523 ~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~-~i~~~l~~~~~~~t~i~itH~l~~i~~~d~i~vl~~G~ 601 (1284)
T 3g5u_A 523 RGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEA-VVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGV 601 (1284)
T ss_dssp SSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHH-HHHHHHHHHHTTSEEEEECSCHHHHTTCSEEEECSSSC
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH-HHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCE
T ss_conf 87865999999999999995299989997987777999999-99999999739998999940778997499899998999
Q ss_pred EEEECCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC-CCCCC-------HHHHCC---CCCCCC---CCCCCCCHHHHH
Q ss_conf 9881382578621147999999743138997656557-88542-------000000---123488---999986022158
Q 000845 599 IIQAATYDHLLVTSQEFQDLVNAHKETMGPETFGEHV-SSKED-------ENEVKK---VEDEGH---NNTSPADQLIKK 664 (1255)
Q Consensus 599 i~~~Gt~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~---~~~~~~---~~~~~~~~~~~~ 664 (1255)
+++.|+|++++...+.|.+++..+..........+.. ..... ...... ...... ...........+
T Consensus 602 i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1284)
T 3g5u_A 602 IVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSICGPHDQDRKLSTK 681 (1284)
T ss_dssp CCCEECHHHHHHTTSHHHHHHHHTC-------------------------------------------------------
T ss_pred EEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99978899998678779999997430022111333333222223443333333320003454333445642233211024
Q ss_pred HHHH--CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCC-C----CHHHHHHHHHHHH
Q ss_conf 7763--099763548998731342378999999999999999999999----965158888-8----8037899999999
Q 000845 665 EERE--TGDTGLKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLW----IATYIPSTS-I----SRLKLVIVYSGIG 733 (1255)
Q Consensus 665 e~~~--~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~-~----~~~~~~~~~~~l~ 733 (1255)
++.+ ........++++.+.....+. +.+++.++..+.....+++ +..+..... . ....+..+|.+++
T Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 759 (1284)
T 3g5u_A 682 EALDEDVPPASFWRILKLNSTEWPYFV--VGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILG 759 (1284)
T ss_dssp --CCCCCSCCCTTHHHHHHHHTCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 555313662589999998451579999--999999999999999999999999998556850336779999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999998449843201--334430388771014686567689899999999999
Q 000845 734 IGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYD--STPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAV 811 (1255)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ff~--~~~~G~il~r~s~D~~~id~~~~~~l~~~~~~~~~~ 811 (1255)
++..++.+.+.+.+.+.+.+...++|.+++++++++|++||| .+++|++++|+++|+..++..++..+..++..++.+
T Consensus 760 i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~ 839 (1284)
T 3g5u_A 760 IISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANL 839 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999983998887578998899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHH
Q ss_conf 99999999886899999999999999999999999999999997842199999999970369999717299999999999
Q 000845 812 ISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDL 891 (1255)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~ 891 (1255)
++.++++++.+|.+.++++..+++.+.+...+.+..+..........+.....+.|++.|+.+||+|++++++.+++.+.
T Consensus 840 ~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~ 919 (1284)
T 3g5u_A 840 GTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQS 919 (1284)
T ss_dssp HHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999999996999999999999999999999999999999999999999999999998899999846599999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999998999999999999999999999-9873258665879999999999999999999999999964564
Q 000845 892 IDAYASSFFHSFTAREWLIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIV 970 (1255)
Q Consensus 892 ~~~~~~~~~~~~~~~~w~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~l~~~l~~~~~~~~~~~~~~~ 970 (1255)
.+...+..........+.....+.+..+......++ ..+...+.++.+.+..++.+.......+..+......+.....
T Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1284)
T 3g5u_A 920 LQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATV 999 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999909806999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCEEEEEEEEEECCCEEEEECCCCCCHHHHHH
Q ss_conf 9999999842999896322479999999998608999899995799-994021125897489499999489994899999
Q 000845 971 SVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLIS 1049 (1255)
Q Consensus 971 s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvsf~Y~~~-~~~vL~~isl~I~~Ge~vaIVGrsGsGKSTL~~ 1049 (1255)
+.+|+.++.+.+++.+... ....+.++..|.|+|+||+|+|+.. ..++|+|+||+|++||++||||+||||||||++
T Consensus 1000 a~~ri~~~l~~~~~~~~~~--~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~ 1077 (1284)
T 3g5u_A 1000 SASHIIRIIEKTPEIDSYS--TQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQ 1077 (1284)
T ss_dssp HHHHHHHHHHSCCSSSSCC--SSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCHHHHHH
T ss_conf 9999999983887666655--56654567778579999899779999870020305997699889998899997899999
Q ss_pred HHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC---CCCHHHHHHCCCCHHHHHHCCHH
Q ss_conf 984258899878999697389999478641417871687557775222156699---99968898405952599762479
Q 000845 1050 ALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS---QFTDQEIWEVTIPSQVLEKCQLR 1126 (1255)
Q Consensus 1050 ~L~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~VpQ~p~LF~gTIr~NLdp~~---~~sd~ei~~~~~~~~al~~~~l~ 1126 (1255)
+|+|+++|++|+|.+||.|++.++++.+|++++||||||.+|++||||||.+.. ..+++++++ ++++++++
T Consensus 1078 ~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~------~~~~~~~~ 1151 (1284)
T 3g5u_A 1078 LLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVR------AAKEANIH 1151 (1284)
T ss_dssp HHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHH------HHHHHTCH
T ss_pred HHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHH------HHHHHCCH
T ss_conf 994686789977989999800078999970268987787406666999974668778999999999------99983959
Q ss_pred HHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf 99996313863000079998892499999999998159993998668889999979999999998749938998626911
Q 000845 1127 EVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIA 1206 (1255)
Q Consensus 1127 ~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDEaTS~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ 1206 (1255)
+++.++|+||||.++|+|.+||||||||+|||||++++|+|||||||||+||.++++.|++.|++..+++|+|+||||++
T Consensus 1152 ~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH~l~ 1231 (1284)
T 3g5u_A 1152 QFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLS 1231 (1284)
T ss_dssp HHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECSCTT
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 99972704245611788893389999999999999749999998687555799999999999998679998999955879
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 131119899995987989769338862199189999999987
Q 000845 1207 TVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYWS 1248 (1255)
Q Consensus 1207 ti~~~DrI~vl~~G~ive~g~~~~Ll~~~~~~f~~l~~~~~~ 1248 (1255)
++..||||+||++|+|+|.|+|++|+++ +|.|++|++....
T Consensus 1232 ~i~~~dri~vl~~G~i~~~g~~~~l~~~-~g~y~~l~~~q~~ 1272 (1284)
T 3g5u_A 1232 TIQNADLIVVIQNGKVKEHGTHQQLLAQ-KGIYFSMVSVQAG 1272 (1284)
T ss_dssp GGGSCSEEEEEETBEEEEEECHHHHHHS-CSHHHHHHHHHC-
T ss_pred HHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHH
T ss_conf 9980998999989989997789999847-7779999999761
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=788.16 Aligned_cols=515 Identities=20% Similarity=0.309 Sum_probs=454.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 78999999999999999999999999999999999999999984498432013344303887710146865676898999
Q 000845 724 KLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTI 803 (1255)
Q Consensus 724 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ff~~~~~G~il~r~s~D~~~id~~~~~~l~~ 803 (1255)
.+.+.|++++++..++.++..+++.+.+.+...++|.+++++++++|++|||++++|++++|+++|++.++..+...+..
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999997889899879984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHH
Q ss_conf 99999999999999998868999999999999999999999999999999978421999999999703699997172999
Q 000845 804 AVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEER 883 (1255)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~ 883 (1255)
++..++.+++.++++++.+|.++++++..+++...+...+.+..+...+......+...+.+.|++.|+++||+|++|+.
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998999999999999999999999-98732586658799999999999999999999999
Q 000845 884 FFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQ 962 (1255)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~l~~~l~~~~~~~ 962 (1255)
+.+++.+..+...+..........+......++..+..+.+.++ ......|.+++|.+..++.+...+..++..+...+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~ 376 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQL 376 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999599869999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCEEEEEEEEEECCCEEEEECCCC
Q ss_conf 999645649999999842999896322479999999998608999899995799-9940211258974894999994899
Q 000845 963 CIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTG 1041 (1255)
Q Consensus 963 ~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvsf~Y~~~-~~~vL~~isl~I~~Ge~vaIVGrsG 1041 (1255)
..+.....|.+|+.++++.+++.+... .......+..|.|+|+||+|+|+.. ..++|+|+||+|++||++||||+||
T Consensus 377 ~~~~~~~~s~~ri~~~l~~~~~~~~~~--~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sG 454 (1321)
T 4f4c_A 377 AVLGTAQGAASGIYEVLDRKPVIDSSS--KAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSG 454 (1321)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCSSCSS--SCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCC
T ss_conf 999999999999999971785345666--556567788876799985540799998743333188622882789980589
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHCCCCHHHH
Q ss_conf 94899999984258899878999697389999478641417871687557775222156699-99968898405952599
Q 000845 1042 SGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVL 1120 (1255)
Q Consensus 1042 sGKSTL~~~L~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~VpQ~p~LF~gTIr~NLdp~~-~~sd~ei~~~~~~~~al 1120 (1255)
||||||+++|+|+|+|++|+|.+||+|++++++++||++|+||||+|+||+|||||||..+. ..+++++++ |+
T Consensus 455 sGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~------a~ 528 (1321)
T 4f4c_A 455 CGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVA------AC 528 (1321)
T ss_dssp SCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHH------HH
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHH------HH
T ss_conf 857788887545651644861579965011259998504666587533207861678864155220999999------99
Q ss_pred HHCCHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 76247999996313863000079998892499999999998159993998668889999979999999998749938998
Q 000845 1121 EKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVIT 1200 (1255)
Q Consensus 1121 ~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDEaTS~lD~~te~~I~~~l~~~~~~~TvI~ 1200 (1255)
+.|+++++|+++|+|+||.|||+|.+||||||||||||||++++|+|+|||||||+||++||+.++++|++..+++|+|+
T Consensus 529 ~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~ii 608 (1321)
T 4f4c_A 529 KMANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTII 608 (1321)
T ss_dssp HHTTCHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEE
T ss_pred HHCCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 87565468870888886075589887777787999999987259998998455446887899999999999847988999
Q ss_pred ECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHH
Q ss_conf 62691113111989999598798976933886219918999999998
Q 000845 1201 VAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1201 IaHrl~ti~~~DrI~vl~~G~ive~g~~~~Ll~~~~~~f~~l~~~~~ 1247 (1255)
||||++++.+||+|+||++|+|+|+|+|+||+++ ++.|+++++...
T Consensus 609 iaHrls~i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q~ 654 (1321)
T 4f4c_A 609 IAHRLSTIRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQT 654 (1321)
T ss_dssp ECSCTTTTTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHHH
T ss_pred ECCCHHHHHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHHH
T ss_conf 7363878986898999639965136899999985-327999999622
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=733.39 Aligned_cols=514 Identities=20% Similarity=0.295 Sum_probs=442.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 78999999999999999999999999999999999999999984498432013344303887710146865676898999
Q 000845 724 KLVIVYSGIGIGMMFLLLTRSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTI 803 (1255)
Q Consensus 724 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ff~~~~~G~il~r~s~D~~~id~~~~~~l~~ 803 (1255)
.+.++|++++++..++.+++.+++.+.+.+...++|.+++++++++|++|||++++|++++|+++|++.++..++..+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~ 188 (1284)
T 3g5u_A 109 TYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGM 188 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998699899756887789999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHH
Q ss_conf 99999999999999998868999999999999999999999999999999978421999999999703699997172999
Q 000845 804 AVGTTMAVISTFVVLGALTWQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEER 883 (1255)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~ 883 (1255)
++..++.+++.++++++.+|.+++++++++++++.+..++.+..++..+......+++.+++.|++.|+++||+|++|++
T Consensus 189 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~ 268 (1284)
T 3g5u_A 189 FFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKK 268 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999978799998465399
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998999999999999999999999-98732586658799999999999999999999999
Q 000845 884 FFAKNLDLIDAYASSFFHSFTAREWLIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQ 962 (1255)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~l~~~l~~~~~~~ 962 (1255)
+.+++.+..+...+..........+......++..+..++..++ ..+...+.+++|.+..++.+.......+..+...+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 348 (1284)
T 3g5u_A 269 ELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNI 348 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999299889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCEEEEEEEEEECCCEEEEECCCC
Q ss_conf 999645649999999842999896322479999999998608999899995799-9940211258974894999994899
Q 000845 963 CIVGNLIVSVERLNQYMRIPSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTG 1041 (1255)
Q Consensus 963 ~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~nvsf~Y~~~-~~~vL~~isl~I~~Ge~vaIVGrsG 1041 (1255)
..+.....+++|+.++.+.+++.+.......++ .+..|.|+|+||+|+|+.. ..++|+|+||+|++||++|||||||
T Consensus 349 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~--~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sG 426 (1284)
T 3g5u_A 349 EAFANARGAAYEVFKIIDNKPSIDSFSKSGHKP--DNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSG 426 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCC--TTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCC
T ss_conf 999999999999999972898677666567777--777771899998997699998710125458975998899989999
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHCCCCHHHH
Q ss_conf 94899999984258899878999697389999478641417871687557775222156699-99968898405952599
Q 000845 1042 SGKTTLISALFRLVEPTGGKIIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVL 1120 (1255)
Q Consensus 1042 sGKSTL~~~L~rl~~~~~G~I~idG~di~~i~~~~lR~~i~~VpQ~p~LF~gTIr~NLdp~~-~~sd~ei~~~~~~~~al 1120 (1255)
||||||+++|.|+|+|++|+|.+||.|+++++++++|++|++|||+|.+|++||||||.+.. +.+++++++ ++
T Consensus 427 sGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~------~~ 500 (1284)
T 3g5u_A 427 CGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEK------AV 500 (1284)
T ss_dssp SSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHH------HH
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHH------HH
T ss_conf 979999999807889997389999998775799999865489868875377669999745798999999999------99
Q ss_pred HHCCHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 76247999996313863000079998892499999999998159993998668889999979999999998749938998
Q 000845 1121 EKCQLREVIQEKKEGLDSLVVQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVIT 1200 (1255)
Q Consensus 1121 ~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDEaTS~lD~~te~~I~~~l~~~~~~~TvI~ 1200 (1255)
+.+++++++.++|+|+||.++++|.+||||||||+|||||++++|+|||||||||+||+++++.+++.++...+++|+|+
T Consensus 501 ~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~ 580 (1284)
T 3g5u_A 501 KEANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIV 580 (1284)
T ss_dssp HHTTCHHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 98296999974656334501478786599999999999999529998999798777799999999999999739998999
Q ss_pred ECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHH
Q ss_conf 6269111311198999959879897693388621991899999999
Q 000845 1201 VAHRIATVMDCNMVLSMSDGKLVEYDEPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1201 IaHrl~ti~~~DrI~vl~~G~ive~g~~~~Ll~~~~~~f~~l~~~~ 1246 (1255)
||||++++.+||+|+||++|+|+|.|+|++|+++ ++.|++++...
T Consensus 581 itH~l~~i~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 625 (1284)
T 3g5u_A 581 IAHRLSTVRNADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQ 625 (1284)
T ss_dssp ECSCHHHHTTCSEEEECSSSCCCCEECHHHHHHT-TSHHHHHHHHT
T ss_pred EECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHH
T ss_conf 9407789974998999989999997889999867-87799999974
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=699.53 Aligned_cols=560 Identities=23% Similarity=0.336 Sum_probs=475.3
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5489987313423789999999999999999999999651588----8888-0378999999999999999999999999
Q 000845 675 KPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS----TSIS-RLKLVIVYSGIGIGMMFLLLTRSFLVVY 749 (1255)
Q Consensus 675 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 749 (1255)
+.++.|++..++ .+.+.+++.++..+..+..++++.+.++. .... ...+..++.++.++..++.+.+.++...
T Consensus 26 ~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (598)
T 3qf4_B 26 RRLLGYLRPHTF--TLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLT 103 (598)
T ss_dssp HHHGGGTGGGHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999--999999999999999999999999999999736888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998449843201334430388771014686567689899999999999999999998868999999
Q 000845 750 LGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLVI 829 (1255)
Q Consensus 750 ~~~~~s~~l~~~l~~~il~~p~~ff~~~~~G~il~r~s~D~~~id~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (1255)
.+.+...++|.++++++++.|+.||+++++|++++|+++|++.++..+...+..++..++.+++.+++++..+|.+++++
T Consensus 104 ~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~ 183 (598)
T 3qf4_B 104 LSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVT 183 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999779999976888899999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999997842199999999970369999717299999999999999999999999998999
Q 000845 830 VPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREWL 909 (1255)
Q Consensus 830 i~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 909 (1255)
+..+++++.+...+.+..++..+......+.+.+++.|+++|+++||+|++|+.+.+++.+..+...+..........+.
T Consensus 184 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (598)
T 3qf4_B 184 LSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVL 263 (598)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999973799999748709999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 999999999999999999-9873258665879999999999999999999999999964564999999984299989632
Q 000845 910 IQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPEL 988 (1255)
Q Consensus 910 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~l~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~ 988 (1255)
....+.+..+..++..++ ......|.+++|.+..++.+...+..++..+...+..+...+.+++|+.++.+.+++.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~- 342 (598)
T 3qf4_B 264 PPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD- 342 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-
T ss_conf 9999999999999999999999985997899999999999999999999999999999999999999999768877777-
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 24799999999986089998999957999940211258974894999994899948999999842588998789996973
Q 000845 989 VQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGLD 1068 (1255)
Q Consensus 989 ~~~~~~~~~~p~~g~I~~~nvsf~Y~~~~~~vL~~isl~I~~Ge~vaIVGrsGsGKSTL~~~L~rl~~~~~G~I~idG~d 1068 (1255)
....+.++..|.|+++||+|+|+++ .++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+||.|
T Consensus 343 ---~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 418 (598)
T 3qf4_B 343 ---PDAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGID 418 (598)
T ss_dssp ---SSCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEE
T ss_pred ---CCCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEE
T ss_conf ---7777777777718999989977999-860122279986998899989999969999999945857998089999998
Q ss_pred CCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCHHCCCCCCC
Q ss_conf 89999478641417871687557775222156699-99968898405952599762479999963138630000799988
Q 000845 1069 ITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGANW 1147 (1255)
Q Consensus 1069 i~~i~~~~lR~~i~~VpQ~p~LF~gTIr~NLdp~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1147 (1255)
+++++.+.+|+++++|||+|.+|++|++||+.... ..+++++++ +++.++++++++.+|+|+||.++++|.+|
T Consensus 419 i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~t~~~~~g~~L 492 (598)
T 3qf4_B 419 IRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKE------AAKLTHSDHFIKHLPEGYETVLTDNGEDL 492 (598)
T ss_dssp GGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHH------HTTTTTCHHHHHTSTTGGGCBCHHHHTTS
T ss_pred HHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHH------HHHHHCCHHHHHHCCCCCCCHHCCCCCCC
T ss_conf 301889999841089907982324639999744799999999999------99996978889746453236422788987
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 92499999999998159993998668889999979999999998749938998626911131119899995987989769
Q 000845 1148 SMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEYDE 1227 (1255)
Q Consensus 1148 SgGQrQrl~lARAlL~~~~ILiLDEaTS~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~g~ 1227 (1255)
|||||||+|||||++++|+|++||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+
T Consensus 493 SgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 572 (598)
T 3qf4_B 493 SQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGK 572 (598)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 99999999999999649999999897667999999999999999808998999942778997199899998999998778
Q ss_pred HHHHHHCCCHHHHHHHHHHHH
Q ss_conf 338862199189999999987
Q 000845 1228 PKKLLRRQDSLFAQLVKEYWS 1248 (1255)
Q Consensus 1228 ~~~Ll~~~~~~f~~l~~~~~~ 1248 (1255)
|+||+++ ++.|++++.....
T Consensus 573 ~~~l~~~-~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 573 HDELIQK-RGFYYELFTSQYG 592 (598)
T ss_dssp HHHHHHT-TCHHHHHHHHHHG
T ss_pred HHHHHHC-CCHHHHHHHHHHH
T ss_conf 9999867-8779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=697.35 Aligned_cols=565 Identities=21% Similarity=0.307 Sum_probs=467.0
Q ss_pred CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCC--H-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9976354899873134237899999999999999999999996515888--888--0-3789999999999999999999
Q 000845 670 GDTGLKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPST--SIS--R-LKLVIVYSGIGIGMMFLLLTRS 744 (1255)
Q Consensus 670 g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~--~-~~~~~~~~~l~~~~~~~~~~~~ 744 (1255)
|...++.+++|++..++.+ .+.+++.++..+..+..++++.++++.. ..+ . ..+..+++++.++..++.+...
T Consensus 7 g~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (587)
T 3qf4_A 7 GGGGSKTLARYLKPYWIFA--VLAPLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCT 84 (587)
T ss_dssp -CCCCCCGGGGTGGGHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8534999999999999999--99999999999999999999999999987369879999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999984498432013344303887710146865676898999999999999999999988689
Q 000845 745 FLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQ 824 (1255)
Q Consensus 745 ~~~~~~~~~~s~~l~~~l~~~il~~p~~ff~~~~~G~il~r~s~D~~~id~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 824 (1255)
++..+.+.+...++|.++++++++.|+.||+++++|++++|+++|++.++..+...+..++...+.+++.+++++..+|.
T Consensus 85 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 164 (587)
T 3qf4_A 85 VFASYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVK 164 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997889799765888999999999999999999999999999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999978421999999999703699997172999999999999999999999999
Q 000845 825 VLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFT 904 (1255)
Q Consensus 825 ~~~~~i~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~ 904 (1255)
++++++..+++.+.+..++.+..++..+......+.+.+.+.|+++|+++||+|++|+.+.+++.+..+...+.......
T Consensus 165 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 244 (587)
T 3qf4_A 165 LSSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFS 244 (587)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999855999998621499999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98999999999999999999999-98732586658799999999999999999999999999645649999999842999
Q 000845 905 AREWLIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPS 983 (1255)
Q Consensus 905 ~~~w~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~l~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 983 (1255)
...+.......+..+......++ ......+.++.|.+..++.+...+..++..+...+..+.....|.+|+.++.+.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 324 (587)
T 3qf4_A 245 LIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKP 324 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998499389999999999999999999999999999999999999999976897
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 89632247999999999860899989999579999402112589748949999948999489999998425889987899
Q 000845 984 EAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKII 1063 (1255)
Q Consensus 984 e~~~~~~~~~~~~~~p~~g~I~~~nvsf~Y~~~~~~vL~~isl~I~~Ge~vaIVGrsGsGKSTL~~~L~rl~~~~~G~I~ 1063 (1255)
+.+.. ..+.+.++..|.|+++||+|+|+++.+++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|.
T Consensus 325 ~~~~~---~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~ 401 (587)
T 3qf4_A 325 AIEEA---DNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVE 401 (587)
T ss_dssp SCCCC---TTCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEE
T ss_pred CCCCC---CCCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 65788---776566888880799788998489997642111799869988999899999799999999278669986798
Q ss_pred ECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCHHCC
Q ss_conf 9697389999478641417871687557775222156699-999688984059525997624799999631386300007
Q 000845 1064 IDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQ 1142 (1255)
Q Consensus 1064 idG~di~~i~~~~lR~~i~~VpQ~p~LF~gTIr~NLdp~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e 1142 (1255)
+||.|+++++.+++|++++||||+|.+|++|+|||+.... ..+++++++ +++.+++++++.++|+|+|+.+++
T Consensus 402 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~------~~~~~~~~~~i~~l~~g~~~~~~~ 475 (587)
T 3qf4_A 402 VDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVE------AAKIAQIHDFIISLPEGYDSRVER 475 (587)
T ss_dssp ESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHH------HHHHTTCHHHHHTSSSGGGCEECS
T ss_pred ECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHH------HHHHHCCHHHHHHCCCCHHHHHCC
T ss_conf 99998340789999841389778986767559999852488999999999------999968499997565312127518
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEE
Q ss_conf 99988924999999999981599939986688899999799999999987499389986269111311198999959879
Q 000845 1143 DGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKL 1222 (1255)
Q Consensus 1143 ~G~~LSgGQrQrl~lARAlL~~~~ILiLDEaTS~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~i 1222 (1255)
+|.+||||||||+|||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|++
T Consensus 476 ~~~~LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i 555 (587)
T 3qf4_A 476 GGRNFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKV 555 (587)
T ss_dssp SSCSSCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEE
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEE
T ss_conf 98992999999999999997299999997975447999999999999986799989998227688981998999989989
Q ss_pred EEECCHHHHHHCCCHHHHHHHHHH
Q ss_conf 897693388621991899999999
Q 000845 1223 VEYDEPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1223 ve~g~~~~Ll~~~~~~f~~l~~~~ 1246 (1255)
+|.|+|+||+++ ++.|+++++..
T Consensus 556 ~~~g~~~el~~~-~~~~~~~~~~~ 578 (587)
T 3qf4_A 556 AGFGTHKELLEH-CKPYREIYESQ 578 (587)
T ss_dssp EEEECHHHHHHH-CHHHHHHHHHH
T ss_pred EEECCHHHHHHC-CCHHHHHHHHH
T ss_conf 997889999867-83999999998
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=685.11 Aligned_cols=559 Identities=21% Similarity=0.287 Sum_probs=458.8
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCCCCH---H-----HHHHHHHHHHHHHHHHHHH
Q ss_conf 548998731342378999999999999999999999965158----888880---3-----7899999999999999999
Q 000845 675 KPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIP----STSISR---L-----KLVIVYSGIGIGMMFLLLT 742 (1255)
Q Consensus 675 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~---~-----~~~~~~~~l~~~~~~~~~~ 742 (1255)
+.+++|++..++.++ ..+++.++..+..+..++.+.+..+ ...... . .+...+.++.++..++.+.
T Consensus 3 ~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (578)
T 4a82_A 3 KRYLQFVKPYKYRIF--ATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFI 80 (578)
T ss_dssp HHHHHHHGGGHHHHH--HHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999889999999--999999999999999999999999999816871146778888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999844984320133443038877101468656768989999999999999999999886
Q 000845 743 RSFLVVYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALT 822 (1255)
Q Consensus 743 ~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ff~~~~~G~il~r~s~D~~~id~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 822 (1255)
+.+...+.+.+...+++.++++++++.|+.||+++++|++++|+++|++.++..+...+..++...+.+++.+++++..+
T Consensus 81 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 81 RQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999987899997689869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999999999784219999999997036999971729999999999999999999999
Q 000845 823 WQVLLVIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHS 902 (1255)
Q Consensus 823 ~~~~~~~i~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~ 902 (1255)
|.++++.+..+++++.+...+.+..++..+......+...+.+.|+++|+++||+|++|+.+.+++.+..+...+.....
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9998999999999999999999999-987325866587999999999999999999999999996456499999998429
Q 000845 903 FTAREWLIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRI 981 (1255)
Q Consensus 903 ~~~~~w~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~l~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~ 981 (1255)
.....+.......+..+...++.++ ......|.+++|.+..++.+...+..++..+...+..+.....|.+|+.++.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 99896322479999999998608999899995799994021125897489499999489994899999984258899878
Q 000845 982 PSEAPELVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGK 1061 (1255)
Q Consensus 982 ~~e~~~~~~~~~~~~~~p~~g~I~~~nvsf~Y~~~~~~vL~~isl~I~~Ge~vaIVGrsGsGKSTL~~~L~rl~~~~~G~ 1061 (1255)
+++.+.. ..+.+.++..|.|+++||+|+|+++.+++|+|+||+|++||++|||||||||||||+++|.|+++|++|+
T Consensus 321 ~~~~~~~---~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 397 (578)
T 4a82_A 321 DYDIKNG---VGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQ 397 (578)
T ss_dssp CCSSCCC---TTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEE
T ss_pred CCCCCCC---CCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 9766678---7766667778807999999975899974134337998799999998999985999999984678899967
Q ss_pred EEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCHH
Q ss_conf 999697389999478641417871687557775222156699-9996889840595259976247999996313863000
Q 000845 1062 IIIDGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS-QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLV 1140 (1255)
Q Consensus 1062 I~idG~di~~i~~~~lR~~i~~VpQ~p~LF~gTIr~NLdp~~-~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v 1140 (1255)
|.+||.|+++++.+++|++++||||+|.+|++|++||+.... ..+++++++ +++.+++++++.++|+|+||.+
T Consensus 398 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~------~~~~~~~~~~~~~lp~g~~t~~ 471 (578)
T 4a82_A 398 ILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVE------AAKMANAHDFIMNLPQGYDTEV 471 (578)
T ss_dssp EEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHH------HHHHTTCHHHHHTSTTGGGCBC
T ss_pred EEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHH------HHHHHCCHHHHHHCCCHHHHHH
T ss_conf 9999998442789999600689928983476459999852799988999999------9988095999975733010253
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECC
Q ss_conf 07999889249999999999815999399866888999997999999999874993899862691113111989999598
Q 000845 1141 VQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDG 1220 (1255)
Q Consensus 1141 ~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDEaTS~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G 1220 (1255)
+++|.+||||||||++||||++++|+|++||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|
T Consensus 472 ~~~g~~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G 551 (578)
T 4a82_A 472 GERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENG 551 (578)
T ss_dssp CGGGTTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECC
T ss_conf 06889679999999999999974999999978654579999999999999980899799983178999719989999899
Q ss_pred EEEEECCHHHHHHCCCHHHHHHHHH
Q ss_conf 7989769338862199189999999
Q 000845 1221 KLVEYDEPKKLLRRQDSLFAQLVKE 1245 (1255)
Q Consensus 1221 ~ive~g~~~~Ll~~~~~~f~~l~~~ 1245 (1255)
+++|.|+|+||+++ ++.|+++++.
T Consensus 552 ~i~~~g~~~el~~~-~~~~~~~~~~ 575 (578)
T 4a82_A 552 HIVETGTHRELIAK-QGAYEHLYSI 575 (578)
T ss_dssp EEEEEECHHHHHHT-TSHHHHHHTT
T ss_pred EEEEECCHHHHHHC-CCHHHHHHHH
T ss_conf 89998889999858-8389999985
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=678.76 Aligned_cols=559 Identities=20% Similarity=0.288 Sum_probs=474.0
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCH--HHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3548998731342378999999999999999999999965158888--880--3789-9999999999999999999999
Q 000845 674 LKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPSTS--ISR--LKLV-IVYSGIGIGMMFLLLTRSFLVV 748 (1255)
Q Consensus 674 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~--~~~~-~~~~~l~~~~~~~~~~~~~~~~ 748 (1255)
++.+++|++..+..+ ...+++.++..+..+..++++.+..+... .+. ..++ ..+.++.++..++.+.+.+...
T Consensus 13 ~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b60_A 13 FRRLWPTIAPFKAGL--IVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCIS 90 (582)
T ss_dssp HHHHHHHHGGGHHHH--HHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999--999999999999999999999999998843686579999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999844984320133443038877101468656768989999999999999999999886899999
Q 000845 749 YLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLV 828 (1255)
Q Consensus 749 ~~~~~~s~~l~~~l~~~il~~p~~ff~~~~~G~il~r~s~D~~~id~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (1255)
..+.+...+++.++++++++.|+.||+++++|++++|+++|++.++..+...+..++..++.+++.++++++.+|.++++
T Consensus 91 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b60_A 91 WVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSII 170 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999980999997889865899999987999999999999999999999999999999980999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999784219999999997036999971729999999999999999999999999899
Q 000845 829 IVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREW 908 (1255)
Q Consensus 829 ~i~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 908 (1255)
++..+++++.+...+.+..++..+......+.+.+.+.|+++|+++||+|++|+.+.+++.+..+...+..........|
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3b60_A 171 LVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSI 250 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999619999983768999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9999999999999999999-987325866587999999999999999999999999996456499999998429998963
Q 000845 909 LIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPE 987 (1255)
Q Consensus 909 ~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~l~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~ 987 (1255)
.....+.+..+...+..++ ......|.++.|.+..++.+...+..++..+...+..+.....+++|+.++.+.+++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (582)
T 3b60_A 251 SDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDE 330 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984999899999999999999999999999999999999999999999759987667
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 22479999999998608999899995799994021125897489499999489994899999984258899878999697
Q 000845 988 LVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGL 1067 (1255)
Q Consensus 988 ~~~~~~~~~~~p~~g~I~~~nvsf~Y~~~~~~vL~~isl~I~~Ge~vaIVGrsGsGKSTL~~~L~rl~~~~~G~I~idG~ 1067 (1255)
. +.+.++..+.|+++||+|+|+++.+++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+||.
T Consensus 331 ---~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b60_A 331 ---G--KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGH 405 (582)
T ss_dssp ---C--CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTE
T ss_pred ---C--CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCE
T ss_conf ---7--77777888847999889973999974415615997699989998999998999999986106898976979999
Q ss_pred ECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCHHCCCCC
Q ss_conf 389999478641417871687557775222156699--999688984059525997624799999631386300007999
Q 000845 1068 DITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS--QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1068 di~~i~~~~lR~~i~~VpQ~p~LF~gTIr~NLdp~~--~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
|+++++.+++|++++||||+|.+|++|++||+.... ..+++++++ +++.++++++++++|+|+||.++++|.
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~------~l~~~~l~~~~~~~p~g~~~~~~~~~~ 479 (582)
T 3b60_A 406 DLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEE------AARMAYAMDFINKMDNGLDTIIGENGV 479 (582)
T ss_dssp ETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHH------HHHTTTCHHHHHHSTTGGGSBCCTTSC
T ss_pred ECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHH------HHHHCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 82306999999608088068747787899998545999989999999------999849799998450411451147988
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEE
Q ss_conf 88924999999999981599939986688899999799999999987499389986269111311198999959879897
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDEaTS~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1225 (1255)
+||||||||++||||++++|+|++||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.
T Consensus 480 ~LSgGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 559 (582)
T 3b60_A 480 LLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVER 559 (582)
T ss_dssp SSCHHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEE
T ss_conf 78999999999999997289989997865557989999999999999679979999454778985998999978889884
Q ss_pred CCHHHHHHCCCHHHHHHHHHH
Q ss_conf 693388621991899999999
Q 000845 1226 DEPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1226 g~~~~Ll~~~~~~f~~l~~~~ 1246 (1255)
|+|++|+++ ++.|+++++..
T Consensus 560 g~~~~l~~~-~~~~~~~~~~q 579 (582)
T 3b60_A 560 GTHSELLAQ-HGVYAQLHKMQ 579 (582)
T ss_dssp ECHHHHHHH-TSSHHHHHHHT
T ss_pred CCHHHHHHC-CCHHHHHHHHH
T ss_conf 589999876-98899999975
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=676.69 Aligned_cols=559 Identities=19% Similarity=0.305 Sum_probs=471.8
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 35489987313423789999999999999999999999651588----888803789-9999999999999999999999
Q 000845 674 LKPYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS----TSISRLKLV-IVYSGIGIGMMFLLLTRSFLVV 748 (1255)
Q Consensus 674 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~ 748 (1255)
++.+++|++..++.+ ...+++.++..+..+..++++.+..+. .......++ ..+.++.++..++.+...+...
T Consensus 13 ~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b5x_A 13 FKRLWTYIRLYKAGL--VVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLS 90 (582)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999988999999--999999999999999999999999999864686679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999844984320133443038877101468656768989999999999999999999886899999
Q 000845 749 YLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLLV 828 (1255)
Q Consensus 749 ~~~~~~s~~l~~~l~~~il~~p~~ff~~~~~G~il~r~s~D~~~id~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (1255)
..+.+...+++.++++++++.|+.||++++.|++++|+++|++.++..+...+..++..++.+++.++++++.+|.++++
T Consensus 91 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b5x_A 91 WVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLV 170 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999986999997789878999999988999999999999999999999999999999982999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999784219999999997036999971729999999999999999999999999899
Q 000845 829 IVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTAREW 908 (1255)
Q Consensus 829 ~i~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 908 (1255)
++..+++++.+...+.+..++..+......+.+.+.+.|++.|+++||+|++|+.+.+++.+..+...+..........|
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3b5x_A 171 LIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSI 250 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999519999970875999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9999999999999999999-987325866587999999999999999999999999996456499999998429998963
Q 000845 909 LIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAPE 987 (1255)
Q Consensus 909 ~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~l~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~ 987 (1255)
.....+.+..+...++.++ ......|.+++|.+..++.+...+..++..+...+..+.....+.+|+.++.+.+++.+.
T Consensus 251 ~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (582)
T 3b5x_A 251 ADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDN 330 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999985998899999999999999999999999999999999999999999758976777
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 22479999999998608999899995799994021125897489499999489994899999984258899878999697
Q 000845 988 LVQKNSPAPDWPPTGKVEIYDLQIRYRPNAPLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIIIDGL 1067 (1255)
Q Consensus 988 ~~~~~~~~~~~p~~g~I~~~nvsf~Y~~~~~~vL~~isl~I~~Ge~vaIVGrsGsGKSTL~~~L~rl~~~~~G~I~idG~ 1067 (1255)
.. .+.++..+.|+++||+|+|+++.+++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+||.
T Consensus 331 ---~~--~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b5x_A 331 ---GK--YEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGH 405 (582)
T ss_pred ---CC--CCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf ---77--7777788828999989972899865400416998799989998999997999999996577899987989999
Q ss_pred ECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCHHCCCCC
Q ss_conf 389999478641417871687557775222156699--999688984059525997624799999631386300007999
Q 000845 1068 DITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLS--QFTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLVVQDGA 1145 (1255)
Q Consensus 1068 di~~i~~~~lR~~i~~VpQ~p~LF~gTIr~NLdp~~--~~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v~e~G~ 1145 (1255)
|+++++.+++|++++||||+|.+|++|++||+.... +.+++++++ +++.++++++++++|+|+||.++++|.
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~------~~~~~~l~~~~~~~p~g~~t~~~~~~~ 479 (582)
T 3b5x_A 406 DVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQ------AARQAHAMEFIENMPQGLDTVIGENGT 479 (582)
T ss_pred EHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHH------HHHHCCCHHHHHHCCCCCCCHHCCCCC
T ss_conf 85638899996485898279905310299998566889999999999------999879899998476533451068888
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEE
Q ss_conf 88924999999999981599939986688899999799999999987499389986269111311198999959879897
Q 000845 1146 NWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDGKLVEY 1225 (1255)
Q Consensus 1146 ~LSgGQrQrl~lARAlL~~~~ILiLDEaTS~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1225 (1255)
+||||||||++||||++++|+|++||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.
T Consensus 480 ~LSgGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 559 (582)
T 3b5x_A 480 SLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIER 559 (582)
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEE
T ss_conf 47999999999999997499999997854468999999999999997289989999368899981998999989989997
Q ss_pred CCHHHHHHCCCHHHHHHHHHH
Q ss_conf 693388621991899999999
Q 000845 1226 DEPKKLLRRQDSLFAQLVKEY 1246 (1255)
Q Consensus 1226 g~~~~Ll~~~~~~f~~l~~~~ 1246 (1255)
|+|++|+++ ++.|+++++..
T Consensus 560 g~~~~l~~~-~~~~~~~~~~q 579 (582)
T 3b5x_A 560 GRHADLLAQ-DGAYAQLHRIQ 579 (582)
T ss_pred CCHHHHHHC-CCHHHHHHHHH
T ss_conf 789999848-85899999986
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=672.89 Aligned_cols=561 Identities=20% Similarity=0.285 Sum_probs=461.9
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCC----HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 489987313423789999999999999999999999651588----8888----03789999999999999999999999
Q 000845 676 PYIDYLSHKKGFLYFTLSTFAYLIFLVAQILQSLWIATYIPS----TSIS----RLKLVIVYSGIGIGMMFLLLTRSFLV 747 (1255)
Q Consensus 676 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~ 747 (1255)
.++.|++..++.++ +.+++.++..+..+..++++.+.++. .... ...+...++++.++..++.+.+.+..
T Consensus 9 ~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (595)
T 2yl4_A 9 KLLGLAYPERRRLA--AAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLM 86 (595)
T ss_dssp HHHHHHGGGHHHHH--HHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999887899999--9999999999999999999999999997357402667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999984498432013344303887710146865676898999999999999999999988689999
Q 000845 748 VYLGLEASESIFYKLMSSLFRAPMAFYDSTPVGRILSRVSSDLSIIDLDLSIKSTIAVGTTMAVISTFVVLGALTWQVLL 827 (1255)
Q Consensus 748 ~~~~~~~s~~l~~~l~~~il~~p~~ff~~~~~G~il~r~s~D~~~id~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (1255)
...+.+...+++.++++++++.|+.||+++++|++++|+++|++.++..+...+..++..++.+++.++++++++|.+++
T Consensus 87 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 166 (595)
T 2yl4_A 87 QTSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLAT 166 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998199999777984889999999999999999999999999999999999999998199999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999978421999999999703699997172999999999999999999999999989
Q 000845 828 VIVPMIYLIIVLQNYYFATAKELMRINGTRSSLLASHLAETVAGAMTIRAFQNEERFFAKNLDLIDAYASSFFHSFTARE 907 (1255)
Q Consensus 828 ~~i~~~~~~~~i~~~~~~~~r~l~~~~~~~~s~~~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1255)
+++..+++.+.+...+.+..++..+......+.+.+++.|+++|+++||+|++|+++.+++.+..+...+..........
T Consensus 167 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (595)
T 2yl4_A 167 FVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARA 246 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999811999998375699999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999999-98732586658799999999999999999999999999645649999999842999896
Q 000845 908 WLIQRLETLSAIVLATSALC-TTLLHKGHKGAGYTGMALSFGLSLNDFLVYSVNNQCIVGNLIVSVERLNQYMRIPSEAP 986 (1255)
Q Consensus 908 w~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~l~~~l~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~ 986 (1255)
|.......+..+......++ ......|.+++|.+..++.+...+..++..+...+..+.....+++|+.++.+.+++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 326 (595)
T 2yl4_A 247 GFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLP 326 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998699789999999999999999999999999999999999999999983897667
Q ss_pred CCCCCCCCCCCCCCCCE-EEEEEEEEEECCC-CCCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 32247999999999860-8999899995799-994021125897489499999489994899999984258899878999
Q 000845 987 ELVQKNSPAPDWPPTGK-VEIYDLQIRYRPN-APLVLRGITCTFEGGHKIGVVGRTGSGKTTLISALFRLVEPTGGKIII 1064 (1255)
Q Consensus 987 ~~~~~~~~~~~~p~~g~-I~~~nvsf~Y~~~-~~~vL~~isl~I~~Ge~vaIVGrsGsGKSTL~~~L~rl~~~~~G~I~i 1064 (1255)
.. ... .+..+..+. |+++||+|+|+.. ..++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.+
T Consensus 327 ~~--~~~-~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~ 403 (595)
T 2yl4_A 327 FN--EGV-ILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISL 403 (595)
T ss_dssp SS--CSB-CCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEE
T ss_pred CC--CCC-CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 77--787-777678998389998899858998881201127998499889998999997999999982585789837999
Q ss_pred CCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCCC----CCHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCHH
Q ss_conf 6973899994786414178716875577752221566999----996889840595259976247999996313863000
Q 000845 1065 DGLDITTIGLYDLRSNLGIIPQDPTLFSGSVRYNLDPLSQ----FTDQEIWEVTIPSQVLEKCQLREVIQEKKEGLDSLV 1140 (1255)
Q Consensus 1065 dG~di~~i~~~~lR~~i~~VpQ~p~LF~gTIr~NLdp~~~----~sd~ei~~~~~~~~al~~~~l~~~i~~lp~gldt~v 1140 (1255)
||.|+++++.+.+|+++++|||+|.+|++|++||+..... .+++++++ +++.++++++++++|+|+|+.+
T Consensus 404 ~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~------~~~~~~l~~~~~~l~~g~~~~~ 477 (595)
T 2yl4_A 404 DGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQR------VAEVANAVAFIRNFPQGFNTVV 477 (595)
T ss_dssp TTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHH------HHHHTTCHHHHHTSSSGGGCBC
T ss_pred CCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHH------HHHHCCCHHHHHHCCCCCCCCC
T ss_conf 9998111799999732289836883268779999840587766568999999------9998697999974732013501
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECC
Q ss_conf 07999889249999999999815999399866888999997999999999874993899862691113111989999598
Q 000845 1141 VQDGANWSMGQRQLIGLGRVVLRRRQILVLDEATASIDNATDSILQNTIRREFANCTVITVAHRIATVMDCNMVLSMSDG 1220 (1255)
Q Consensus 1141 ~e~G~~LSgGQrQrl~lARAlL~~~~ILiLDEaTS~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G 1220 (1255)
+++|.+||||||||++||||++++|+|++||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|
T Consensus 478 ~~~~~~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G 557 (595)
T 2yl4_A 478 GEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQG 557 (595)
T ss_dssp SSSSCCCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECC
T ss_conf 68878689999999999999975999999988666899899999999999996599799994687899759989999899
Q ss_pred EEEEECCHHHHHHCCCHHHHHHHHHHH
Q ss_conf 798976933886219918999999998
Q 000845 1221 KLVEYDEPKKLLRRQDSLFAQLVKEYW 1247 (1255)
Q Consensus 1221 ~ive~g~~~~Ll~~~~~~f~~l~~~~~ 1247 (1255)
+++|.|+|++|++++++.|+++++...
T Consensus 558 ~i~~~g~~~~l~~~~~~~~~~~~~~q~ 584 (595)
T 2yl4_A 558 KITEYGKHEELLSKPNGIYRKLMNKQS 584 (595)
T ss_dssp EEEEEECSCC------C----------
T ss_pred EEEEECCHHHHHHCCCHHHHHHHHHHH
T ss_conf 899978899997478729999999743
Done!