Query 000846
Match_columns 1255
No_of_seqs 687 out of 4764
Neff 8.5
Searched_HMMs 46136
Date Tue Apr 2 00:24:44 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000846.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000846hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 7E-220 1E-224 1997.0 130.1 1213 3-1250 14-1227(1228)
2 PTZ00265 multidrug resistance 100.0 6E-175 1E-179 1728.1 154.3 1222 3-1248 46-1465(1466)
3 KOG0054 Multidrug resistance-a 100.0 3E-166 6E-171 1563.0 124.6 1145 30-1249 217-1376(1381)
4 PLN03130 ABC transporter C fam 100.0 1E-157 3E-162 1576.8 149.0 1099 86-1250 366-1476(1622)
5 PLN03232 ABC transporter C fam 100.0 4E-156 9E-161 1566.1 145.8 1094 86-1250 366-1473(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 1E-151 3E-156 1524.4 149.3 1174 34-1249 334-1521(1522)
7 PTZ00243 ABC transporter; Prov 100.0 2E-145 3E-150 1459.7 147.5 1171 20-1250 247-1548(1560)
8 TIGR01271 CFTR_protein cystic 100.0 6E-143 1E-147 1435.5 147.2 1175 25-1250 91-1454(1490)
9 KOG0058 Peptide exporter, ABC 100.0 5E-112 1E-116 990.1 66.7 574 669-1250 133-706 (716)
10 KOG0058 Peptide exporter, ABC 100.0 1E-106 2E-111 945.0 66.1 574 3-588 134-708 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 3E-103 7E-108 965.1 70.3 575 3-585 651-1226(1228)
12 COG2274 SunT ABC-type bacterio 100.0 1E-94 2.2E-99 885.8 72.0 567 672-1249 143-709 (709)
13 COG2274 SunT ABC-type bacterio 100.0 6.6E-90 1.4E-94 843.4 72.2 547 21-584 161-708 (709)
14 COG1132 MdlB ABC-type multidru 100.0 9.6E-88 2.1E-92 837.2 74.9 561 673-1250 6-566 (567)
15 PRK11174 cysteine/glutathione 100.0 8.4E-87 1.8E-91 833.8 75.8 568 671-1250 10-586 (588)
16 TIGR00958 3a01208 Conjugate Tr 100.0 4.7E-86 1E-90 837.4 74.9 565 669-1245 147-711 (711)
17 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.3E-84 2.9E-89 826.0 76.1 562 671-1248 123-685 (686)
18 PRK11174 cysteine/glutathione 100.0 3.1E-84 6.7E-89 810.7 74.7 566 4-585 10-585 (588)
19 PTZ00265 multidrug resistance 100.0 1.8E-84 3.9E-89 863.4 74.9 569 5-584 814-1465(1466)
20 TIGR01193 bacteriocin_ABC ABC- 100.0 4.2E-84 9E-89 824.2 74.0 564 671-1247 144-708 (708)
21 COG4988 CydD ABC-type transpor 100.0 9.4E-84 2E-88 740.5 69.4 552 688-1250 5-557 (559)
22 PRK11160 cysteine/glutathione 100.0 1.4E-83 3.1E-88 797.4 75.2 566 672-1247 5-573 (574)
23 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 7.5E-84 1.6E-88 823.0 73.6 564 671-1245 142-709 (710)
24 TIGR00958 3a01208 Conjugate Tr 100.0 4.9E-83 1.1E-87 809.8 74.3 561 4-580 149-710 (711)
25 KOG0056 Heavy metal exporter H 100.0 2E-86 4.4E-91 725.8 36.3 503 739-1249 272-775 (790)
26 COG1132 MdlB ABC-type multidru 100.0 9.6E-83 2.1E-87 792.3 74.2 562 3-585 3-565 (567)
27 TIGR03375 type_I_sec_LssB type 100.0 8E-83 1.7E-87 810.7 75.0 557 673-1239 137-693 (694)
28 PRK11176 lipid transporter ATP 100.0 1.9E-82 4E-87 794.4 76.1 567 672-1250 14-581 (582)
29 PRK10790 putative multidrug tr 100.0 7.9E-82 1.7E-86 788.9 75.9 567 671-1251 11-578 (592)
30 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1E-81 2.3E-86 799.4 76.8 562 4-584 123-685 (686)
31 TIGR01846 type_I_sec_HlyB type 100.0 1.3E-81 2.8E-86 798.8 76.0 567 671-1249 127-693 (694)
32 KOG0057 Mitochondrial Fe/S clu 100.0 1.7E-82 3.8E-87 715.3 59.5 551 689-1250 36-588 (591)
33 PRK11160 cysteine/glutathione 100.0 6.2E-81 1.3E-85 773.9 75.1 568 1-582 1-572 (574)
34 COG4987 CydC ABC-type transpor 100.0 2.8E-81 6.2E-86 705.4 64.0 559 679-1247 12-572 (573)
35 TIGR01193 bacteriocin_ABC ABC- 100.0 6.2E-81 1.3E-85 795.1 74.5 562 4-582 144-707 (708)
36 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.4E-80 3E-85 792.9 74.1 561 5-581 143-709 (710)
37 TIGR02203 MsbA_lipidA lipid A 100.0 2.8E-80 6.2E-85 774.1 75.2 564 673-1248 4-568 (571)
38 TIGR03375 type_I_sec_LssB type 100.0 3.4E-80 7.3E-85 786.6 75.0 553 5-571 136-689 (694)
39 COG4988 CydD ABC-type transpor 100.0 7.6E-80 1.6E-84 708.2 69.7 550 22-585 5-556 (559)
40 TIGR02868 CydC thiol reductant 100.0 2.4E-80 5.2E-85 765.8 69.7 525 674-1206 4-529 (529)
41 PRK13657 cyclic beta-1,2-gluca 100.0 1.9E-79 4.1E-84 766.1 77.1 566 670-1249 6-571 (588)
42 TIGR01192 chvA glucan exporter 100.0 2.9E-79 6.2E-84 759.7 77.6 565 671-1249 7-571 (585)
43 PRK11176 lipid transporter ATP 100.0 3.3E-79 7.1E-84 765.1 75.3 564 5-584 14-579 (582)
44 TIGR02204 MsbA_rel ABC transpo 100.0 9E-79 2E-83 760.8 75.6 568 673-1248 8-575 (576)
45 KOG0056 Heavy metal exporter H 100.0 2.4E-82 5.1E-87 693.9 37.6 542 33-587 231-777 (790)
46 PRK10789 putative multidrug tr 100.0 4.4E-79 9.5E-84 757.4 71.9 544 695-1249 7-551 (569)
47 TIGR01846 type_I_sec_HlyB type 100.0 1.5E-78 3.3E-83 770.6 76.5 565 4-584 127-692 (694)
48 PRK10790 putative multidrug tr 100.0 2.2E-78 4.8E-83 757.8 76.5 563 6-587 13-578 (592)
49 TIGR02203 MsbA_lipidA lipid A 100.0 9.6E-78 2.1E-82 751.3 75.6 564 5-584 3-568 (571)
50 COG5265 ATM1 ABC-type transpor 100.0 8.3E-81 1.8E-85 678.6 40.4 493 748-1247 4-497 (497)
51 TIGR02868 CydC thiol reductant 100.0 3.7E-78 8E-83 746.3 69.0 523 5-542 2-529 (529)
52 TIGR01192 chvA glucan exporter 100.0 6.6E-77 1.4E-81 738.6 76.8 564 4-585 7-571 (585)
53 PRK13657 cyclic beta-1,2-gluca 100.0 6.8E-77 1.5E-81 743.0 77.3 564 4-585 7-571 (588)
54 PRK10789 putative multidrug tr 100.0 3E-77 6.5E-82 741.0 72.8 537 36-586 14-552 (569)
55 TIGR02204 MsbA_rel ABC transpo 100.0 1.1E-76 2.4E-81 741.9 75.3 568 5-584 7-575 (576)
56 TIGR02857 CydD thiol reductant 100.0 4.3E-77 9.4E-82 736.8 70.6 528 682-1218 2-529 (529)
57 KOG0057 Mitochondrial Fe/S clu 100.0 1.9E-77 4.1E-82 674.5 60.5 551 22-585 35-587 (591)
58 TIGR00957 MRP_assoc_pro multi 100.0 4.8E-77 1E-81 802.5 75.5 535 34-583 982-1519(1522)
59 PLN03130 ABC transporter C fam 100.0 6E-76 1.3E-80 789.2 75.4 535 35-585 933-1475(1622)
60 COG4987 CydC ABC-type transpor 100.0 7.8E-76 1.7E-80 661.4 63.1 554 15-582 14-571 (573)
61 TIGR02857 CydD thiol reductant 100.0 1.8E-75 3.9E-80 722.3 71.2 524 19-554 5-529 (529)
62 TIGR01842 type_I_sec_PrtD type 100.0 3.8E-75 8.3E-80 719.8 72.8 536 682-1234 5-542 (544)
63 COG1123 ATPase components of v 100.0 5.8E-77 1.3E-81 689.0 46.6 485 344-1248 5-532 (539)
64 PLN03232 ABC transporter C fam 100.0 7.2E-75 1.6E-79 780.4 73.7 515 61-585 950-1472(1495)
65 TIGR01842 type_I_sec_PrtD type 100.0 3.3E-74 7.2E-79 711.5 73.3 532 20-570 9-542 (544)
66 KOG0054 Multidrug resistance-a 100.0 2.1E-75 4.5E-80 738.2 63.5 545 23-583 823-1374(1381)
67 PTZ00243 ABC transporter; Prov 100.0 1.3E-74 2.9E-79 775.7 75.2 511 66-584 1003-1546(1560)
68 COG4618 ArpD ABC-type protease 100.0 1.5E-73 3.3E-78 635.8 52.6 535 18-571 25-561 (580)
69 PRK10261 glutathione transport 100.0 8.5E-74 1.8E-78 713.1 51.4 501 344-1246 12-565 (623)
70 COG5265 ATM1 ABC-type transpor 100.0 5.2E-74 1.1E-78 625.4 40.5 491 82-582 3-496 (497)
71 PRK13549 xylose transporter AT 100.0 6.6E-74 1.4E-78 701.9 46.3 462 344-1233 5-493 (506)
72 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.6E-71 3.5E-76 686.9 65.8 535 670-1226 4-551 (555)
73 PRK15134 microcin C ABC transp 100.0 3.6E-73 7.7E-78 699.2 50.7 468 344-1235 5-516 (529)
74 TIGR01271 CFTR_protein cystic 100.0 1E-70 2.2E-75 738.7 74.2 499 72-585 936-1453(1490)
75 PRK09700 D-allose transporter 100.0 9.4E-73 2E-77 693.1 46.6 459 344-1231 5-495 (510)
76 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.4E-70 5.1E-75 676.6 66.9 533 3-562 4-551 (555)
77 PRK10762 D-ribose transporter 100.0 1.9E-72 4E-77 688.3 46.1 454 344-1233 4-483 (501)
78 COG4618 ArpD ABC-type protease 100.0 1.4E-70 3.1E-75 612.0 52.6 528 692-1235 32-561 (580)
79 TIGR03269 met_CoM_red_A2 methy 100.0 3.3E-72 7.1E-77 689.9 43.7 456 345-1234 1-517 (520)
80 PRK15439 autoinducer 2 ABC tra 100.0 1.7E-71 3.6E-76 679.9 48.8 465 344-1234 11-492 (510)
81 TIGR02633 xylG D-xylose ABC tr 100.0 9.2E-72 2E-76 683.3 46.5 465 345-1232 2-490 (500)
82 TIGR01257 rim_protein retinal- 100.0 1.2E-69 2.5E-74 714.9 68.7 221 343-572 927-1151(2272)
83 PRK11288 araG L-arabinose tran 100.0 1E-71 2.3E-76 681.7 45.6 456 344-1233 4-484 (501)
84 COG4172 ABC-type uncharacteriz 100.0 1.6E-71 3.4E-76 600.5 41.4 471 344-1243 6-524 (534)
85 PRK10982 galactose/methyl gala 100.0 7.6E-71 1.7E-75 673.0 45.3 453 347-1232 1-478 (491)
86 TIGR00956 3a01205 Pleiotropic 100.0 7.7E-69 1.7E-73 714.1 58.9 212 1008-1230 759-989 (1394)
87 PRK10938 putative molybdenum t 100.0 8.5E-70 1.8E-74 664.3 44.9 452 344-1227 3-485 (490)
88 PRK15064 ABC transporter ATP-b 100.0 2.6E-68 5.5E-73 656.3 53.5 483 345-1235 2-526 (530)
89 PRK10522 multidrug transporter 100.0 4.5E-66 9.7E-71 638.8 65.2 525 678-1234 8-539 (547)
90 PRK11819 putative ABC transpor 100.0 1.5E-66 3.3E-71 642.0 55.4 482 344-1235 6-534 (556)
91 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 4.4E-66 9.4E-71 638.2 55.9 481 344-1234 4-531 (552)
92 PRK10522 multidrug transporter 100.0 1E-64 2.2E-69 626.7 66.6 518 9-562 6-530 (547)
93 PLN03140 ABC transporter G fam 100.0 3.8E-64 8.2E-69 665.0 61.3 213 1008-1230 867-1106(1470)
94 PRK10636 putative ABC transpor 100.0 2.5E-64 5.3E-69 628.1 53.4 201 1008-1234 312-517 (638)
95 TIGR00954 3a01203 Peroxysomal 100.0 2.7E-62 6E-67 611.9 63.2 530 670-1219 78-652 (659)
96 TIGR00954 3a01203 Peroxysomal 100.0 1.8E-62 3.9E-67 613.5 60.0 529 4-556 79-653 (659)
97 PRK11147 ABC transporter ATPas 100.0 5.5E-63 1.2E-67 618.2 54.9 201 1008-1234 319-528 (635)
98 PLN03073 ABC transporter F fam 100.0 2.6E-63 5.5E-68 618.5 49.6 200 1008-1233 508-713 (718)
99 COG1129 MglA ABC-type sugar tr 100.0 2.7E-63 5.8E-68 572.0 42.8 457 344-1228 8-484 (500)
100 PRK13409 putative ATPase RIL; 100.0 1.1E-62 2.4E-67 603.1 38.1 193 1008-1229 340-537 (590)
101 COG3845 ABC-type uncharacteriz 100.0 5.4E-61 1.2E-65 538.5 40.9 462 344-1231 4-489 (501)
102 COG0488 Uup ATPase components 100.0 3E-60 6.5E-65 564.2 46.9 487 344-1235 3-526 (530)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 1E-53 2.3E-58 476.6 27.2 238 1007-1249 1-238 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 2.6E-52 5.6E-57 420.8 22.2 226 344-579 2-234 (240)
105 COG1126 GlnQ ABC-type polar am 100.0 3.1E-50 6.8E-55 405.8 22.5 214 1008-1235 2-226 (240)
106 PRK14257 phosphate ABC transpo 100.0 2.8E-49 6E-54 452.5 28.9 231 1002-1235 74-314 (329)
107 COG1135 AbcC ABC-type metal io 100.0 1E-49 2.2E-54 422.7 21.6 227 345-582 2-243 (339)
108 COG1135 AbcC ABC-type metal io 100.0 2.5E-49 5.4E-54 419.7 22.3 228 1009-1247 2-244 (339)
109 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.8E-48 6.2E-53 432.9 27.8 236 343-583 1-236 (275)
110 COG1125 OpuBA ABC-type proline 100.0 5.5E-49 1.2E-53 403.6 20.1 220 345-574 2-229 (309)
111 COG1117 PstB ABC-type phosphat 100.0 9E-49 2E-53 392.4 19.3 221 343-573 6-240 (253)
112 COG1117 PstB ABC-type phosphat 100.0 1.4E-48 3.1E-53 391.0 18.9 218 1008-1235 7-238 (253)
113 KOG0927 Predicted transporter 100.0 1.2E-47 2.7E-52 430.9 28.0 198 1008-1230 389-592 (614)
114 COG1125 OpuBA ABC-type proline 100.0 1.1E-47 2.4E-52 394.0 19.0 220 1009-1243 2-233 (309)
115 cd03252 ABCC_Hemolysin The ABC 100.0 1.2E-46 2.7E-51 416.2 28.1 235 1009-1246 1-235 (237)
116 PRK14257 phosphate ABC transpo 100.0 1.7E-46 3.7E-51 429.5 27.5 227 339-573 75-316 (329)
117 cd03288 ABCC_SUR2 The SUR doma 100.0 3.2E-46 6.9E-51 416.8 29.0 241 1005-1248 16-256 (257)
118 COG4615 PvdE ABC-type sideroph 100.0 1.8E-43 3.8E-48 381.3 46.3 470 67-562 54-529 (546)
119 KOG0065 Pleiotropic drug resis 100.0 7.8E-45 1.7E-49 447.6 38.2 213 1009-1231 788-1018(1391)
120 COG1127 Ttg2A ABC-type transpo 100.0 6.9E-46 1.5E-50 380.3 21.7 215 343-571 7-236 (263)
121 COG1120 FepC ABC-type cobalami 100.0 5.7E-46 1.2E-50 397.8 20.6 214 344-571 2-229 (258)
122 cd03253 ABCC_ATM1_transporter 100.0 4.7E-45 1E-49 403.6 27.8 235 1009-1247 1-235 (236)
123 COG3839 MalK ABC-type sugar tr 100.0 1.3E-45 2.9E-50 410.1 23.3 215 344-574 3-227 (338)
124 cd03251 ABCC_MsbA MsbA is an e 100.0 4.2E-45 9E-50 403.4 27.1 233 1009-1244 1-233 (234)
125 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 5.9E-45 1.3E-49 403.1 27.7 236 1009-1246 1-236 (238)
126 COG3840 ThiQ ABC-type thiamine 100.0 1.5E-45 3.2E-50 359.0 19.6 209 345-571 2-220 (231)
127 cd03254 ABCC_Glucan_exporter_l 100.0 7.6E-45 1.6E-49 400.0 27.6 227 1007-1235 1-227 (229)
128 cd03252 ABCC_Hemolysin The ABC 100.0 8.5E-45 1.8E-49 401.5 27.9 234 345-581 1-234 (237)
129 cd03244 ABCC_MRP_domain2 Domai 100.0 6.9E-45 1.5E-49 398.0 26.7 221 1007-1229 1-221 (221)
130 COG3638 ABC-type phosphate/pho 100.0 2.2E-45 4.8E-50 375.6 19.0 223 344-570 3-237 (258)
131 COG2884 FtsE Predicted ATPase 100.0 2.2E-45 4.8E-50 361.5 17.9 207 345-564 2-220 (223)
132 COG4615 PvdE ABC-type sideroph 100.0 5.5E-42 1.2E-46 369.8 45.6 476 728-1227 50-530 (546)
133 TIGR02314 ABC_MetN D-methionin 100.0 7E-45 1.5E-49 416.3 24.5 226 1009-1246 2-242 (343)
134 COG3842 PotA ABC-type spermidi 100.0 2.2E-45 4.9E-50 410.5 19.9 215 343-573 4-229 (352)
135 COG1120 FepC ABC-type cobalami 100.0 8.6E-45 1.9E-49 388.7 22.0 214 1008-1235 2-229 (258)
136 COG1116 TauB ABC-type nitrate/ 100.0 7.5E-45 1.6E-49 380.1 21.0 195 344-557 3-207 (248)
137 COG1124 DppF ABC-type dipeptid 100.0 1.4E-44 3E-49 373.5 21.1 226 1008-1245 3-241 (252)
138 PRK13631 cbiO cobalt transport 100.0 4.1E-44 9E-49 408.9 27.2 220 1008-1234 21-265 (320)
139 COG1127 Ttg2A ABC-type transpo 100.0 2E-44 4.3E-49 369.6 22.0 225 1008-1247 8-247 (263)
140 cd03288 ABCC_SUR2 The SUR doma 100.0 8.6E-44 1.9E-48 397.3 28.8 240 340-582 15-254 (257)
141 cd03245 ABCC_bacteriocin_expor 100.0 6.6E-44 1.4E-48 390.0 26.9 220 1007-1227 1-220 (220)
142 COG1122 CbiO ABC-type cobalt t 100.0 2.2E-44 4.8E-49 387.1 22.6 215 1008-1235 3-229 (235)
143 COG1136 SalX ABC-type antimicr 100.0 4.4E-44 9.5E-49 375.7 24.1 210 345-561 2-222 (226)
144 KOG0062 ATPase component of AB 100.0 9.8E-44 2.1E-48 397.5 27.9 194 1007-1225 361-559 (582)
145 COG1124 DppF ABC-type dipeptid 100.0 4E-44 8.7E-49 370.0 23.0 217 344-571 3-232 (252)
146 COG3839 MalK ABC-type sugar tr 100.0 2.7E-44 5.9E-49 399.7 23.3 217 1008-1241 3-229 (338)
147 COG2884 FtsE Predicted ATPase 100.0 1.3E-44 2.9E-49 356.0 18.0 208 1009-1229 2-221 (223)
148 cd03254 ABCC_Glucan_exporter_l 100.0 1.2E-43 2.6E-48 390.5 27.3 226 343-570 1-226 (229)
149 COG3638 ABC-type phosphate/pho 100.0 3.2E-44 6.9E-49 367.1 20.5 223 1008-1247 3-246 (258)
150 TIGR02314 ABC_MetN D-methionin 100.0 6.1E-44 1.3E-48 408.6 24.7 230 345-581 2-241 (343)
151 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.6E-43 3.6E-48 391.5 27.1 226 345-570 1-226 (238)
152 cd03251 ABCC_MsbA MsbA is an e 100.0 1.8E-43 3.9E-48 390.4 27.1 226 345-571 1-226 (234)
153 COG4178 ABC-type uncharacteriz 100.0 2E-40 4.4E-45 389.7 54.2 473 729-1219 89-587 (604)
154 COG1122 CbiO ABC-type cobalt t 100.0 7.9E-44 1.7E-48 382.9 23.2 215 344-571 3-229 (235)
155 cd03253 ABCC_ATM1_transporter 100.0 2.3E-43 5.1E-48 390.0 27.5 224 345-570 1-224 (236)
156 COG3840 ThiQ ABC-type thiamine 100.0 6.4E-44 1.4E-48 347.6 19.7 209 1009-1235 2-220 (231)
157 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.2E-43 2.6E-48 377.4 23.5 218 1008-1246 4-236 (254)
158 COG1136 SalX ABC-type antimicr 100.0 1.8E-43 4E-48 371.0 24.2 207 1009-1225 2-222 (226)
159 cd03244 ABCC_MRP_domain2 Domai 100.0 3.3E-43 7.2E-48 384.7 26.9 220 343-564 1-220 (221)
160 cd03248 ABCC_TAP TAP, the Tran 100.0 1.5E-43 3.3E-48 388.6 24.0 219 1005-1223 8-226 (226)
161 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-43 3E-48 391.1 23.2 213 1009-1235 1-227 (235)
162 cd03260 ABC_PstB_phosphate_tra 100.0 1.2E-43 2.7E-48 389.5 21.8 212 1009-1232 1-227 (227)
163 COG1118 CysA ABC-type sulfate/ 100.0 9E-44 2E-48 376.1 19.0 214 344-573 2-230 (345)
164 cd03369 ABCC_NFT1 Domain 2 of 100.0 5.8E-43 1.3E-47 378.3 25.8 207 1003-1229 1-207 (207)
165 COG1116 TauB ABC-type nitrate/ 100.0 2E-43 4.4E-48 369.4 21.2 197 1008-1223 3-211 (248)
166 PRK13650 cbiO cobalt transport 100.0 3.9E-43 8.5E-48 395.9 24.9 217 1008-1235 4-230 (279)
167 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.7E-43 8.1E-48 373.7 23.2 209 344-570 4-227 (254)
168 cd03245 ABCC_bacteriocin_expor 100.0 1E-42 2.3E-47 380.5 26.8 220 343-563 1-220 (220)
169 PRK14269 phosphate ABC transpo 100.0 6.6E-43 1.4E-47 388.1 24.9 218 1008-1235 2-231 (246)
170 PRK13631 cbiO cobalt transport 100.0 1.7E-42 3.6E-47 395.7 28.0 222 343-571 20-266 (320)
171 COG3842 PotA ABC-type spermidi 100.0 2.3E-43 4.9E-48 394.4 19.6 218 1008-1242 5-233 (352)
172 PRK11153 metN DL-methionine tr 100.0 1.3E-42 2.7E-47 401.5 26.2 220 1009-1235 2-231 (343)
173 PRK11432 fbpC ferric transport 100.0 9.2E-43 2E-47 401.3 24.4 217 1008-1241 6-232 (351)
174 PRK13637 cbiO cobalt transport 100.0 2.2E-42 4.8E-47 391.1 26.8 217 1009-1234 3-234 (287)
175 cd03248 ABCC_TAP TAP, the Tran 100.0 1.6E-42 3.5E-47 380.5 24.8 219 341-559 8-226 (226)
176 PRK14250 phosphate ABC transpo 100.0 2.3E-42 5E-47 382.2 26.1 224 1008-1245 3-231 (241)
177 PRK11650 ugpC glycerol-3-phosp 100.0 1.9E-42 4.1E-47 400.1 26.4 219 1008-1242 3-231 (356)
178 cd03219 ABC_Mj1267_LivG_branch 100.0 1.1E-42 2.3E-47 384.7 23.2 221 1009-1234 1-232 (236)
179 PRK13647 cbiO cobalt transport 100.0 1.8E-42 3.9E-47 389.4 24.3 212 1008-1232 4-225 (274)
180 PRK14242 phosphate transporter 100.0 2.2E-42 4.8E-47 386.0 24.6 218 1008-1235 6-238 (253)
181 PRK11650 ugpC glycerol-3-phosp 100.0 1.9E-42 4E-47 400.1 24.7 214 344-572 3-226 (356)
182 PRK13646 cbiO cobalt transport 100.0 3.3E-42 7.1E-47 389.8 26.0 220 1009-1235 3-236 (286)
183 PRK14273 phosphate ABC transpo 100.0 3.1E-42 6.8E-47 384.8 25.4 224 1008-1242 7-245 (254)
184 TIGR03265 PhnT2 putative 2-ami 100.0 1.8E-42 4E-47 399.7 23.9 217 1008-1241 4-230 (353)
185 PRK13635 cbiO cobalt transport 100.0 2.6E-42 5.6E-47 388.9 24.5 215 1008-1234 5-229 (279)
186 cd03296 ABC_CysA_sulfate_impor 100.0 2.2E-42 4.9E-47 382.3 23.6 211 1009-1235 3-227 (239)
187 TIGR01186 proV glycine betaine 100.0 1.7E-42 3.7E-47 398.5 23.3 206 1024-1241 6-225 (363)
188 TIGR00972 3a0107s01c2 phosphat 100.0 3E-42 6.6E-47 383.2 24.4 222 1009-1241 2-238 (247)
189 cd03261 ABC_Org_Solvent_Resist 100.0 4.5E-42 9.7E-47 379.1 25.4 216 345-570 1-226 (235)
190 PRK10744 pstB phosphate transp 100.0 5E-42 1.1E-46 384.0 26.1 220 1006-1235 11-245 (260)
191 PRK11432 fbpC ferric transport 100.0 4.7E-42 1E-46 395.5 26.4 214 344-573 6-229 (351)
192 cd03263 ABC_subfamily_A The AB 100.0 2.6E-42 5.6E-47 377.4 23.1 211 1009-1232 1-219 (220)
193 PRK09536 btuD corrinoid ABC tr 100.0 3.6E-42 7.8E-47 400.5 25.3 221 1008-1245 3-236 (402)
194 COG4178 ABC-type uncharacteriz 100.0 8.4E-39 1.8E-43 376.0 53.6 472 66-555 91-587 (604)
195 cd03224 ABC_TM1139_LivF_branch 100.0 4.1E-42 8.9E-47 376.5 24.1 217 1009-1234 1-221 (222)
196 cd03256 ABC_PhnC_transporter A 100.0 3.9E-42 8.4E-47 381.7 24.1 212 1009-1233 1-233 (241)
197 TIGR00960 3a0501s02 Type II (G 100.0 1.7E-42 3.7E-47 377.5 20.8 203 1009-1223 2-216 (216)
198 cd03291 ABCC_CFTR1 The CFTR su 100.0 2E-41 4.3E-46 379.3 29.8 219 1006-1245 37-256 (282)
199 PRK13642 cbiO cobalt transport 100.0 5.5E-42 1.2E-46 386.5 25.3 217 1008-1235 4-230 (277)
200 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.8E-42 1.3E-46 378.3 24.8 216 1009-1235 2-222 (236)
201 PRK13643 cbiO cobalt transport 100.0 5.2E-42 1.1E-46 388.2 25.0 216 1009-1234 2-233 (288)
202 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.7E-42 6E-47 387.2 22.5 219 1010-1243 26-258 (269)
203 TIGR03265 PhnT2 putative 2-ami 100.0 3.5E-42 7.6E-47 397.4 23.9 217 344-572 4-226 (353)
204 TIGR01186 proV glycine betaine 100.0 3E-42 6.5E-47 396.5 23.0 203 360-573 6-222 (363)
205 PRK13650 cbiO cobalt transport 100.0 6.1E-42 1.3E-46 386.2 24.9 217 344-571 4-230 (279)
206 PRK14267 phosphate ABC transpo 100.0 5.3E-42 1.2E-46 382.9 23.8 218 1008-1235 4-238 (253)
207 PRK14235 phosphate transporter 100.0 7.2E-42 1.6E-46 383.7 24.9 220 1006-1235 17-252 (267)
208 PRK10851 sulfate/thiosulfate t 100.0 6.2E-42 1.3E-46 395.3 24.9 216 1009-1241 3-232 (353)
209 cd03260 ABC_PstB_phosphate_tra 100.0 4E-42 8.7E-47 377.6 22.2 210 345-568 1-227 (227)
210 PRK13634 cbiO cobalt transport 100.0 9.9E-42 2.1E-46 386.4 25.9 219 1009-1234 3-235 (290)
211 PRK11153 metN DL-methionine tr 100.0 6.7E-42 1.4E-46 395.5 24.8 220 345-571 2-231 (343)
212 TIGR02315 ABC_phnC phosphonate 100.0 7E-42 1.5E-46 380.0 23.9 212 1009-1233 2-234 (243)
213 cd03259 ABC_Carb_Solutes_like 100.0 3.2E-42 7E-47 374.4 20.7 203 1009-1227 1-213 (213)
214 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.9E-42 1.5E-46 379.2 23.6 218 1009-1235 1-226 (242)
215 TIGR03258 PhnT 2-aminoethylpho 100.0 6.3E-42 1.4E-46 395.5 23.7 218 1007-1241 4-234 (362)
216 PRK14247 phosphate ABC transpo 100.0 8.4E-42 1.8E-46 380.6 23.9 225 1008-1243 3-242 (250)
217 PRK13637 cbiO cobalt transport 100.0 1.6E-41 3.4E-46 384.1 26.4 219 345-570 3-234 (287)
218 cd03258 ABC_MetN_methionine_tr 100.0 7E-42 1.5E-46 377.3 22.9 215 1009-1234 2-230 (233)
219 cd03219 ABC_Mj1267_LivG_branch 100.0 6.1E-42 1.3E-46 378.7 22.4 221 345-570 1-232 (236)
220 PRK09452 potA putrescine/sperm 100.0 1.2E-41 2.5E-46 394.5 25.7 217 1008-1241 14-240 (375)
221 TIGR02769 nickel_nikE nickel i 100.0 9.7E-42 2.1E-46 382.6 24.3 239 1009-1255 3-260 (265)
222 PRK09452 potA putrescine/sperm 100.0 1.2E-41 2.6E-46 394.4 25.8 215 343-573 13-237 (375)
223 PRK13636 cbiO cobalt transport 100.0 1E-41 2.2E-46 385.3 24.6 214 1008-1234 5-231 (283)
224 PRK14259 phosphate ABC transpo 100.0 1.8E-41 4E-46 380.6 26.3 219 1007-1235 12-254 (269)
225 cd03250 ABCC_MRP_domain1 Domai 100.0 1.1E-41 2.4E-46 367.4 23.6 200 1009-1222 1-204 (204)
226 PRK14269 phosphate ABC transpo 100.0 1.3E-41 2.7E-46 377.8 24.6 218 344-571 2-231 (246)
227 PRK13633 cobalt transporter AT 100.0 1.1E-41 2.4E-46 384.6 24.5 217 1008-1235 4-234 (280)
228 PRK11629 lolD lipoprotein tran 100.0 9.1E-42 2E-46 375.9 23.0 210 1008-1228 5-228 (233)
229 TIGR03005 ectoine_ehuA ectoine 100.0 1.2E-41 2.7E-46 379.5 24.3 213 1009-1235 1-237 (252)
230 cd03218 ABC_YhbG The ABC trans 100.0 8.7E-42 1.9E-46 376.4 22.8 216 1009-1234 1-222 (232)
231 PRK13632 cbiO cobalt transport 100.0 1.3E-41 2.9E-46 382.4 24.7 216 1008-1235 7-232 (271)
232 PRK14248 phosphate ABC transpo 100.0 1.3E-41 2.9E-46 382.4 24.6 218 1008-1235 21-253 (268)
233 PRK13651 cobalt transporter AT 100.0 1.6E-41 3.5E-46 385.4 25.5 216 1009-1235 3-255 (305)
234 PRK15079 oligopeptide ABC tran 100.0 1.4E-41 3.1E-46 389.4 25.2 228 1008-1243 8-259 (331)
235 PRK14268 phosphate ABC transpo 100.0 1.3E-41 2.8E-46 380.3 23.8 218 1008-1235 12-243 (258)
236 PRK14244 phosphate ABC transpo 100.0 7.4E-42 1.6E-46 381.1 21.6 222 1009-1241 6-243 (251)
237 PRK13640 cbiO cobalt transport 100.0 2.1E-41 4.5E-46 382.5 25.4 216 1007-1234 4-232 (282)
238 PRK11000 maltose/maltodextrin 100.0 1.4E-41 3.1E-46 395.7 24.7 217 1008-1241 3-229 (369)
239 PRK14251 phosphate ABC transpo 100.0 1.3E-41 2.8E-46 379.4 23.3 218 1008-1235 4-236 (251)
240 cd03226 ABC_cobalt_CbiO_domain 100.0 6.6E-42 1.4E-46 369.5 20.3 199 1010-1224 1-205 (205)
241 PRK13643 cbiO cobalt transport 100.0 1.6E-41 3.5E-46 384.2 24.3 219 345-570 2-233 (288)
242 PRK14239 phosphate transporter 100.0 1.8E-41 4E-46 378.6 24.5 218 1008-1235 5-237 (252)
243 PRK10851 sulfate/thiosulfate t 100.0 1.6E-41 3.5E-46 391.9 24.7 217 344-572 2-228 (353)
244 PRK13652 cbiO cobalt transport 100.0 1.9E-41 4.1E-46 382.2 24.8 214 1009-1235 4-228 (277)
245 PRK14240 phosphate transporter 100.0 1.8E-41 4E-46 377.9 24.4 219 1007-1235 2-235 (250)
246 TIGR03258 PhnT 2-aminoethylpho 100.0 1.4E-41 3.1E-46 392.5 24.3 218 343-572 4-230 (362)
247 PRK14256 phosphate ABC transpo 100.0 2.2E-41 4.7E-46 377.6 24.9 220 1006-1235 2-237 (252)
248 PRK14237 phosphate transporter 100.0 2.1E-41 4.5E-46 380.0 24.9 219 1007-1235 19-252 (267)
249 cd03369 ABCC_NFT1 Domain 2 of 100.0 3.7E-41 8E-46 364.3 25.9 204 342-565 4-207 (207)
250 cd03266 ABC_NatA_sodium_export 100.0 1.7E-41 3.6E-46 370.4 23.4 207 1009-1227 2-218 (218)
251 PRK09493 glnQ glutamine ABC tr 100.0 2.7E-41 5.8E-46 374.2 25.3 217 1009-1235 2-226 (240)
252 cd03264 ABC_drug_resistance_li 100.0 1.3E-41 2.7E-46 369.2 22.3 203 1009-1227 1-211 (211)
253 PRK14249 phosphate ABC transpo 100.0 3.1E-41 6.7E-46 376.1 25.9 227 1008-1244 4-245 (251)
254 PRK10619 histidine/lysine/argi 100.0 2.2E-41 4.7E-46 378.5 24.8 215 1007-1235 4-242 (257)
255 PRK14274 phosphate ABC transpo 100.0 2E-41 4.3E-46 379.2 24.5 218 1008-1235 12-244 (259)
256 PRK11264 putative amino-acid A 100.0 1.7E-41 3.6E-46 378.4 23.7 217 1009-1235 4-234 (250)
257 PRK11614 livF leucine/isoleuci 100.0 2.1E-41 4.5E-46 374.3 24.2 218 1008-1234 5-226 (237)
258 COG4175 ProV ABC-type proline/ 100.0 8.3E-42 1.8E-46 360.7 19.8 227 344-581 4-265 (386)
259 PRK14236 phosphate transporter 100.0 2.6E-41 5.7E-46 380.2 25.3 220 1006-1235 23-257 (272)
260 PRK10070 glycine betaine trans 100.0 1.8E-41 4E-46 394.3 24.7 209 1025-1245 42-265 (400)
261 cd03296 ABC_CysA_sulfate_impor 100.0 1.7E-41 3.6E-46 375.3 23.2 216 344-571 2-227 (239)
262 PRK14254 phosphate ABC transpo 100.0 3.1E-41 6.7E-46 380.9 25.9 219 1007-1235 38-270 (285)
263 TIGR03410 urea_trans_UrtE urea 100.0 1.3E-41 2.7E-46 374.5 22.1 212 1009-1233 1-220 (230)
264 PRK13537 nodulation ABC transp 100.0 1.7E-41 3.7E-46 386.3 23.8 217 1008-1235 7-228 (306)
265 PRK14250 phosphate ABC transpo 100.0 3.4E-41 7.4E-46 372.9 25.6 216 344-571 3-222 (241)
266 cd03247 ABCC_cytochrome_bd The 100.0 1.5E-41 3.3E-46 357.7 21.6 178 1009-1227 1-178 (178)
267 COG1118 CysA ABC-type sulfate/ 100.0 7E-42 1.5E-46 361.8 19.0 217 1008-1241 2-233 (345)
268 cd03265 ABC_DrrA DrrA is the A 100.0 1.9E-41 4.2E-46 370.1 23.2 209 1009-1232 1-219 (220)
269 PRK13646 cbiO cobalt transport 100.0 2.9E-41 6.3E-46 382.1 25.3 220 344-570 2-235 (286)
270 PRK14245 phosphate ABC transpo 100.0 1.9E-41 4.1E-46 377.6 23.4 218 1008-1235 3-235 (250)
271 PRK13644 cbiO cobalt transport 100.0 2.8E-41 6E-46 379.9 24.8 213 1009-1234 2-224 (274)
272 PRK10575 iron-hydroxamate tran 100.0 2E-41 4.3E-46 380.0 23.6 213 1008-1234 11-237 (265)
273 PRK13647 cbiO cobalt transport 100.0 3E-41 6.4E-46 379.6 25.0 212 344-568 4-225 (274)
274 cd03268 ABC_BcrA_bacitracin_re 100.0 1.7E-41 3.8E-46 367.3 22.1 203 1009-1227 1-208 (208)
275 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 9.8E-42 2.1E-46 372.3 20.1 208 1009-1223 1-218 (218)
276 PRK11231 fecE iron-dicitrate t 100.0 2.5E-41 5.3E-46 377.6 23.7 221 1009-1246 3-236 (255)
277 TIGR00972 3a0107s01c2 phosphat 100.0 4.4E-41 9.4E-46 374.0 25.6 217 345-571 2-233 (247)
278 PRK14262 phosphate ABC transpo 100.0 2.8E-41 6E-46 376.5 23.9 227 1008-1245 3-244 (250)
279 PRK14242 phosphate transporter 100.0 3.2E-41 7E-46 376.6 24.6 218 344-571 6-238 (253)
280 PRK11247 ssuB aliphatic sulfon 100.0 2.8E-41 6.1E-46 374.6 23.7 204 1008-1230 12-219 (257)
281 PRK14273 phosphate ABC transpo 100.0 5.1E-41 1.1E-45 375.1 25.9 219 343-571 6-239 (254)
282 PRK13634 cbiO cobalt transport 100.0 4.9E-41 1.1E-45 380.7 26.2 220 344-570 2-235 (290)
283 PRK11831 putative ABC transpor 100.0 2.9E-41 6.3E-46 379.3 24.1 224 1008-1246 7-244 (269)
284 cd03256 ABC_PhnC_transporter A 100.0 2.5E-41 5.5E-46 375.2 23.3 221 345-569 1-233 (241)
285 PRK10744 pstB phosphate transp 100.0 5.9E-41 1.3E-45 375.4 26.2 220 342-571 11-245 (260)
286 TIGR03411 urea_trans_UrtD urea 100.0 4.4E-41 9.5E-46 373.2 24.9 221 1009-1234 3-231 (242)
287 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.7E-41 5.9E-46 374.4 23.1 218 345-571 1-226 (242)
288 PRK11308 dppF dipeptide transp 100.0 3.5E-41 7.6E-46 385.9 24.7 226 1008-1244 5-253 (327)
289 PRK14238 phosphate transporter 100.0 6.4E-41 1.4E-45 376.6 26.4 218 1008-1235 24-256 (271)
290 cd03301 ABC_MalK_N The N-termi 100.0 2E-41 4.4E-46 368.4 21.5 203 1009-1227 1-213 (213)
291 TIGR02211 LolD_lipo_ex lipopro 100.0 2.8E-41 6.1E-46 369.5 22.7 209 1009-1224 2-220 (221)
292 cd03224 ABC_TM1139_LivF_branch 100.0 2.8E-41 6E-46 370.0 22.6 217 345-570 1-221 (222)
293 PRK09536 btuD corrinoid ABC tr 100.0 3.6E-41 7.8E-46 392.1 24.7 214 344-571 3-229 (402)
294 PRK14261 phosphate ABC transpo 100.0 4.7E-41 1E-45 375.1 24.7 227 1008-1245 6-247 (253)
295 PRK13649 cbiO cobalt transport 100.0 6.2E-41 1.3E-45 379.5 25.9 219 1009-1234 3-234 (280)
296 TIGR00960 3a0501s02 Type II (G 100.0 1.9E-41 4E-46 369.3 20.7 203 345-559 2-216 (216)
297 PRK11607 potG putrescine trans 100.0 3.1E-41 6.7E-46 391.9 23.7 217 1008-1241 19-245 (377)
298 PRK13651 cobalt transporter AT 100.0 6.1E-41 1.3E-45 380.6 25.6 220 344-570 2-254 (305)
299 PRK14270 phosphate ABC transpo 100.0 5.2E-41 1.1E-45 374.3 24.6 218 1008-1235 4-236 (251)
300 TIGR02315 ABC_phnC phosphonate 100.0 4.4E-41 9.5E-46 373.6 23.9 220 345-568 2-233 (243)
301 PRK14243 phosphate transporter 100.0 7.3E-41 1.6E-45 375.0 25.7 218 1008-1235 10-249 (264)
302 PRK14260 phosphate ABC transpo 100.0 4.6E-41 9.9E-46 376.1 24.1 219 1007-1235 6-244 (259)
303 cd03225 ABC_cobalt_CbiO_domain 100.0 2.3E-41 4.9E-46 367.4 20.9 201 1010-1222 1-211 (211)
304 PRK14271 phosphate ABC transpo 100.0 8.7E-41 1.9E-45 375.9 26.3 218 1008-1235 21-252 (276)
305 cd03258 ABC_MetN_methionine_tr 100.0 3.7E-41 8E-46 371.5 22.8 219 345-570 2-230 (233)
306 COG1137 YhbG ABC-type (unclass 100.0 2.5E-42 5.5E-47 342.1 12.0 223 343-571 3-229 (243)
307 PRK13641 cbiO cobalt transport 100.0 7.9E-41 1.7E-45 378.8 26.0 219 1009-1234 3-234 (287)
308 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.1E-41 4.4E-46 369.9 20.5 205 1009-1229 1-218 (220)
309 TIGR02673 FtsE cell division A 100.0 2.6E-41 5.6E-46 367.8 21.1 201 1009-1222 2-214 (214)
310 PRK13645 cbiO cobalt transport 100.0 6.7E-41 1.5E-45 380.4 25.4 222 1006-1234 4-240 (289)
311 cd03259 ABC_Carb_Solutes_like 100.0 2.4E-41 5.3E-46 367.6 20.7 207 345-563 1-213 (213)
312 PRK10895 lipopolysaccharide AB 100.0 5.4E-41 1.2E-45 372.0 23.6 216 1009-1234 4-226 (241)
313 PRK15079 oligopeptide ABC tran 100.0 9E-41 1.9E-45 382.8 26.1 222 344-572 8-253 (331)
314 PRK11000 maltose/maltodextrin 100.0 5.8E-41 1.3E-45 390.6 24.8 217 344-572 3-225 (369)
315 PRK13635 cbiO cobalt transport 100.0 7.1E-41 1.5E-45 377.2 24.7 215 344-570 5-229 (279)
316 cd03263 ABC_subfamily_A The AB 100.0 3.3E-41 7.2E-46 368.6 21.3 215 345-568 1-219 (220)
317 PRK14266 phosphate ABC transpo 100.0 7.8E-41 1.7E-45 372.9 24.6 223 1009-1242 4-241 (250)
318 PRK13648 cbiO cobalt transport 100.0 8.8E-41 1.9E-45 375.7 25.2 216 1008-1235 7-232 (269)
319 PRK11124 artP arginine transpo 100.0 6.5E-41 1.4E-45 371.6 23.8 216 1009-1234 3-230 (242)
320 TIGR03415 ABC_choXWV_ATP choli 100.0 4.2E-41 9.2E-46 388.3 23.1 208 1024-1243 37-262 (382)
321 COG0410 LivF ABC-type branched 100.0 7.9E-41 1.7E-45 343.4 22.4 220 344-571 3-227 (237)
322 PRK15112 antimicrobial peptide 100.0 8.8E-41 1.9E-45 374.9 25.0 230 1008-1248 4-253 (267)
323 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.7E-41 8.1E-46 378.1 22.0 216 346-571 26-251 (269)
324 PRK11022 dppD dipeptide transp 100.0 5.9E-41 1.3E-45 384.4 24.1 227 1009-1244 4-252 (326)
325 PRK14235 phosphate transporter 100.0 9.2E-41 2E-45 374.8 25.2 220 342-571 17-252 (267)
326 PRK09473 oppD oligopeptide tra 100.0 5.7E-41 1.2E-45 384.7 23.9 228 1008-1244 12-260 (330)
327 cd03292 ABC_FtsE_transporter F 100.0 4.5E-41 9.8E-46 366.1 21.8 202 1009-1223 1-214 (214)
328 PRK13638 cbiO cobalt transport 100.0 6.9E-41 1.5E-45 376.9 23.9 213 1009-1235 2-226 (271)
329 PRK13548 hmuV hemin importer A 100.0 1.2E-40 2.6E-45 371.9 25.6 212 1009-1234 3-230 (258)
330 cd03300 ABC_PotA_N PotA is an 100.0 5E-41 1.1E-45 369.6 22.1 211 1009-1235 1-221 (232)
331 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1E-40 2.2E-45 368.3 24.5 216 345-571 2-222 (236)
332 PRK14252 phosphate ABC transpo 100.0 9.4E-41 2E-45 374.9 24.6 221 1005-1235 13-250 (265)
333 TIGR01288 nodI ATP-binding ABC 100.0 9E-41 1.9E-45 381.3 24.8 217 1008-1235 4-225 (303)
334 cd03290 ABCC_SUR1_N The SUR do 100.0 1E-40 2.2E-45 363.8 24.1 210 1010-1222 2-218 (218)
335 PRK11300 livG leucine/isoleuci 100.0 9.8E-41 2.1E-45 373.4 24.5 220 1008-1234 5-243 (255)
336 cd03218 ABC_YhbG The ABC trans 100.0 5.7E-41 1.2E-45 369.9 22.2 216 345-570 1-222 (232)
337 PRK14241 phosphate transporter 100.0 9.3E-41 2E-45 373.6 24.1 218 1008-1235 4-243 (258)
338 PRK14253 phosphate ABC transpo 100.0 1E-40 2.3E-45 371.6 24.3 218 1008-1235 3-234 (249)
339 PRK13537 nodulation ABC transp 100.0 5.7E-41 1.2E-45 381.9 22.7 218 343-571 6-228 (306)
340 TIGR00968 3a0106s01 sulfate AB 100.0 1.1E-40 2.5E-45 367.7 24.3 211 1009-1235 1-221 (237)
341 PRK09493 glnQ glutamine ABC tr 100.0 9.2E-41 2E-45 369.9 23.6 217 345-571 2-226 (240)
342 PRK13642 cbiO cobalt transport 100.0 1.5E-40 3.3E-45 374.8 25.8 216 344-570 4-229 (277)
343 PRK11607 potG putrescine trans 100.0 8.6E-41 1.9E-45 388.1 24.2 218 343-572 18-241 (377)
344 PRK13636 cbiO cobalt transport 100.0 1.3E-40 2.8E-45 376.2 25.0 218 344-570 5-231 (283)
345 PRK10253 iron-enterobactin tra 100.0 1.1E-40 2.4E-45 374.0 24.1 214 1007-1234 6-233 (265)
346 PRK11629 lolD lipoprotein tran 100.0 1.5E-40 3.3E-45 366.2 24.8 214 344-564 5-228 (233)
347 TIGR03522 GldA_ABC_ATP gliding 100.0 1.2E-40 2.6E-45 379.5 24.8 216 1009-1235 3-222 (301)
348 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.8E-41 8.2E-46 367.6 19.8 208 345-559 1-218 (218)
349 PRK14275 phosphate ABC transpo 100.0 1.4E-40 3.1E-45 376.1 25.1 225 1008-1243 39-278 (286)
350 cd03235 ABC_Metallic_Cations A 100.0 4.1E-41 8.9E-46 365.8 19.8 198 1010-1227 1-213 (213)
351 COG4555 NatA ABC-type Na+ tran 100.0 2.1E-41 4.6E-46 335.9 15.9 219 345-571 2-223 (245)
352 PRK13536 nodulation factor exp 100.0 1.4E-40 3.1E-45 382.0 25.3 217 1008-1235 41-262 (340)
353 cd03291 ABCC_CFTR1 The CFTR su 100.0 6.1E-40 1.3E-44 367.3 29.7 232 316-570 15-247 (282)
354 cd03246 ABCC_Protease_Secretio 100.0 8.6E-41 1.9E-45 350.0 21.4 172 1009-1223 1-173 (173)
355 PRK10070 glycine betaine trans 100.0 9.7E-41 2.1E-45 388.3 24.1 205 361-572 42-256 (400)
356 PRK14272 phosphate ABC transpo 100.0 1.3E-40 2.9E-45 371.6 24.3 225 1008-1243 4-244 (252)
357 cd03266 ABC_NatA_sodium_export 100.0 7.2E-41 1.6E-45 365.4 21.5 211 345-563 2-218 (218)
358 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.3E-40 2.8E-45 361.3 23.2 201 1009-1227 1-211 (211)
359 PRK14263 phosphate ABC transpo 100.0 1.7E-40 3.8E-45 370.6 24.9 218 1008-1235 8-246 (261)
360 TIGR03873 F420-0_ABC_ATP propo 100.0 1.3E-40 2.8E-45 372.0 23.8 212 1009-1234 2-226 (256)
361 PRK11264 putative amino-acid A 100.0 2.9E-40 6.2E-45 368.5 26.6 218 344-571 3-234 (250)
362 PRK13639 cbiO cobalt transport 100.0 9.6E-41 2.1E-45 376.0 22.9 213 1009-1234 2-226 (275)
363 PRK10584 putative ABC transpor 100.0 1.4E-40 2.9E-45 365.7 23.5 208 1008-1226 6-227 (228)
364 cd03226 ABC_cobalt_CbiO_domain 100.0 6.2E-41 1.3E-45 361.9 20.3 199 346-560 1-205 (205)
365 cd03265 ABC_DrrA DrrA is the A 100.0 1.3E-40 2.8E-45 363.7 22.9 213 345-568 1-219 (220)
366 PRK14258 phosphate ABC transpo 100.0 1.8E-40 3.9E-45 371.5 24.6 219 1007-1235 6-246 (261)
367 PRK14259 phosphate ABC transpo 100.0 2.9E-40 6.4E-45 370.8 26.3 219 343-571 12-254 (269)
368 PRK10908 cell division protein 100.0 1.5E-40 3.3E-45 363.6 23.3 204 1009-1225 2-217 (222)
369 cd03250 ABCC_MRP_domain1 Domai 100.0 1.9E-40 4.1E-45 357.8 23.7 200 345-558 1-204 (204)
370 cd03257 ABC_NikE_OppD_transpor 100.0 2.3E-40 5E-45 364.4 24.7 212 1009-1227 2-228 (228)
371 PRK14248 phosphate ABC transpo 100.0 2.4E-40 5.3E-45 372.2 25.3 218 344-571 21-253 (268)
372 PRK14274 phosphate ABC transpo 100.0 2.6E-40 5.7E-45 370.2 25.5 218 344-571 12-244 (259)
373 cd03264 ABC_drug_resistance_li 100.0 1.1E-40 2.4E-45 361.9 21.7 203 345-563 1-211 (211)
374 PRK11308 dppF dipeptide transp 100.0 1.9E-40 4.2E-45 379.9 24.8 222 344-572 5-246 (327)
375 PRK14247 phosphate ABC transpo 100.0 2.3E-40 5E-45 369.1 24.8 218 344-571 3-235 (250)
376 PRK10247 putative ABC transpor 100.0 1E-40 2.2E-45 365.1 21.4 209 1008-1230 7-223 (225)
377 PRK10771 thiQ thiamine transpo 100.0 2.8E-40 6E-45 363.9 25.1 209 1009-1235 2-220 (232)
378 PRK14265 phosphate ABC transpo 100.0 3E-40 6.5E-45 371.4 25.9 218 1008-1235 20-259 (274)
379 PRK14240 phosphate transporter 100.0 3.4E-40 7.4E-45 367.7 25.9 219 343-571 2-235 (250)
380 PRK14267 phosphate ABC transpo 100.0 1.7E-40 3.7E-45 370.8 23.3 218 344-571 4-238 (253)
381 PRK10619 histidine/lysine/argi 100.0 1.9E-40 4.1E-45 370.9 23.6 219 343-571 4-242 (257)
382 TIGR03005 ectoine_ehuA ectoine 100.0 2.3E-40 5E-45 369.3 24.3 217 345-571 1-237 (252)
383 PRK14249 phosphate ABC transpo 100.0 3.7E-40 8.1E-45 367.4 25.9 219 344-572 4-237 (251)
384 PRK14255 phosphate ABC transpo 100.0 2E-40 4.3E-45 370.0 23.7 218 1008-1235 5-237 (252)
385 PRK11701 phnK phosphonate C-P 100.0 2.8E-40 6.1E-45 369.7 25.0 226 1008-1244 6-250 (258)
386 PRK13644 cbiO cobalt transport 100.0 3.5E-40 7.5E-45 370.9 25.6 217 345-570 2-224 (274)
387 PRK11614 livF leucine/isoleuci 100.0 2.4E-40 5.1E-45 365.9 23.9 218 344-570 5-226 (237)
388 TIGR02769 nickel_nikE nickel i 100.0 1.8E-40 4E-45 372.2 23.3 220 344-570 2-240 (265)
389 cd03269 ABC_putative_ATPase Th 100.0 8.3E-41 1.8E-45 362.5 19.9 205 1009-1227 1-210 (210)
390 PRK14246 phosphate ABC transpo 100.0 1.8E-40 4E-45 369.5 23.0 227 1008-1245 10-251 (257)
391 PRK14268 phosphate ABC transpo 100.0 2.6E-40 5.6E-45 369.8 24.2 220 344-571 12-243 (258)
392 cd03299 ABC_ModC_like Archeal 100.0 2.9E-40 6.2E-45 364.0 24.3 210 1009-1235 1-220 (235)
393 PRK11831 putative ABC transpor 100.0 1.8E-40 3.9E-45 372.8 23.1 218 344-571 7-234 (269)
394 PRK14264 phosphate ABC transpo 100.0 3E-40 6.4E-45 376.7 25.0 219 1007-1235 44-290 (305)
395 TIGR02211 LolD_lipo_ex lipopro 100.0 1.6E-40 3.4E-45 363.6 21.9 209 345-560 2-220 (221)
396 PRK13632 cbiO cobalt transport 100.0 3.5E-40 7.6E-45 370.9 25.2 219 344-570 7-231 (271)
397 TIGR03415 ABC_choXWV_ATP choli 100.0 2E-40 4.4E-45 382.7 23.8 205 360-571 37-255 (382)
398 TIGR03411 urea_trans_UrtD urea 100.0 3E-40 6.6E-45 366.4 24.3 222 344-570 2-231 (242)
399 PRK13640 cbiO cobalt transport 100.0 3.9E-40 8.3E-45 372.2 25.5 220 343-570 4-232 (282)
400 cd03268 ABC_BcrA_bacitracin_re 100.0 1.8E-40 3.9E-45 359.4 21.8 203 345-563 1-208 (208)
401 PRK13641 cbiO cobalt transport 100.0 4.1E-40 8.8E-45 372.9 25.7 220 344-570 2-234 (287)
402 PRK10575 iron-hydroxamate tran 100.0 2.4E-40 5.2E-45 371.3 23.6 213 344-570 11-237 (265)
403 cd03262 ABC_HisP_GlnQ_permease 100.0 1.3E-40 2.8E-45 362.2 20.7 205 1009-1223 1-213 (213)
404 PRK10895 lipopolysaccharide AB 100.0 2.7E-40 5.8E-45 366.4 23.5 217 344-570 3-226 (241)
405 PRK14236 phosphate transporter 100.0 4E-40 8.7E-45 370.7 25.3 220 342-571 23-257 (272)
406 PRK13633 cobalt transporter AT 100.0 2.8E-40 6.1E-45 373.2 24.1 220 344-570 4-233 (280)
407 PRK14239 phosphate transporter 100.0 3.7E-40 7.9E-45 368.1 24.7 218 344-571 5-237 (252)
408 PRK14237 phosphate transporter 100.0 5.3E-40 1.1E-44 368.6 26.1 220 342-571 18-252 (267)
409 PRK13649 cbiO cobalt transport 100.0 4.8E-40 1E-44 372.2 25.9 219 345-570 3-234 (280)
410 PRK13652 cbiO cobalt transport 100.0 4.7E-40 1E-44 370.8 25.6 218 344-570 3-227 (277)
411 PRK11022 dppD dipeptide transp 100.0 2.5E-40 5.4E-45 379.3 23.7 222 344-572 3-245 (326)
412 PRK13645 cbiO cobalt transport 100.0 4.3E-40 9.2E-45 373.8 25.4 222 342-570 4-240 (289)
413 PRK14256 phosphate ABC transpo 100.0 4.6E-40 9.9E-45 366.9 25.1 220 343-572 3-238 (252)
414 PRK14245 phosphate ABC transpo 100.0 2.6E-40 5.6E-45 368.5 23.0 220 344-571 3-235 (250)
415 COG4555 NatA ABC-type Na+ tran 100.0 6.4E-41 1.4E-45 332.5 16.0 215 1009-1235 2-223 (245)
416 cd03247 ABCC_cytochrome_bd The 100.0 2.4E-40 5.2E-45 348.5 21.4 178 345-563 1-178 (178)
417 TIGR01288 nodI ATP-binding ABC 100.0 2.2E-40 4.8E-45 378.2 22.8 216 344-570 4-224 (303)
418 PRK13547 hmuV hemin importer A 100.0 3.2E-40 6.9E-45 369.3 23.6 212 1009-1234 2-244 (272)
419 PRK15093 antimicrobial peptide 100.0 4.3E-40 9.3E-45 378.8 25.2 226 1009-1243 4-256 (330)
420 PRK13536 nodulation factor exp 100.0 2.5E-40 5.5E-45 380.0 23.0 217 344-571 41-262 (340)
421 PRK09473 oppD oligopeptide tra 100.0 3.1E-40 6.7E-45 378.6 23.7 229 344-579 12-259 (330)
422 COG0410 LivF ABC-type branched 100.0 4.7E-40 1E-44 337.7 22.4 219 1009-1235 4-227 (237)
423 cd03234 ABCG_White The White s 100.0 2.2E-40 4.7E-45 363.2 21.4 214 1009-1227 4-226 (226)
424 cd03301 ABC_MalK_N The N-termi 100.0 2.4E-40 5.3E-45 359.9 21.4 207 345-563 1-213 (213)
425 PRK11144 modC molybdate transp 100.0 3.6E-40 7.9E-45 382.4 24.2 210 1009-1235 2-219 (352)
426 TIGR03410 urea_trans_UrtE urea 100.0 2.1E-40 4.6E-45 364.7 21.0 212 345-568 1-219 (230)
427 PRK14243 phosphate transporter 100.0 7.5E-40 1.6E-44 366.8 25.8 218 344-571 10-249 (264)
428 TIGR01277 thiQ thiamine ABC tr 100.0 4.7E-40 1E-44 357.1 23.3 202 1009-1228 1-212 (213)
429 TIGR01978 sufC FeS assembly AT 100.0 3E-40 6.5E-45 367.1 22.3 216 1009-1234 1-234 (243)
430 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.9E-40 4.1E-45 362.3 20.3 209 345-565 1-218 (220)
431 PRK11247 ssuB aliphatic sulfon 100.0 5E-40 1.1E-44 364.6 24.0 204 344-566 12-219 (257)
432 PRK14238 phosphate transporter 100.0 1E-39 2.2E-44 366.8 26.8 221 344-571 24-256 (271)
433 cd03257 ABC_NikE_OppD_transpor 100.0 3.1E-40 6.7E-45 363.4 22.1 213 345-563 2-228 (228)
434 PRK11231 fecE iron-dicitrate t 100.0 4.7E-40 1E-44 367.3 23.7 213 344-570 2-227 (255)
435 PRK10418 nikD nickel transport 100.0 4.9E-40 1.1E-44 366.7 23.7 226 1008-1248 4-244 (254)
436 PRK13648 cbiO cobalt transport 100.0 6.4E-40 1.4E-44 368.7 24.6 219 344-570 7-231 (269)
437 TIGR03522 GldA_ABC_ATP gliding 100.0 3.3E-40 7.2E-45 376.0 22.5 215 345-570 3-221 (301)
438 PRK14244 phosphate ABC transpo 100.0 3.3E-40 7.1E-45 367.9 21.9 217 345-571 6-238 (251)
439 PRK11300 livG leucine/isoleuci 100.0 6.2E-40 1.3E-44 366.9 24.1 222 344-570 5-243 (255)
440 PRK10419 nikE nickel transport 100.0 6.1E-40 1.3E-44 368.0 24.0 231 1009-1245 4-250 (268)
441 PRK14270 phosphate ABC transpo 100.0 8E-40 1.7E-44 364.7 24.7 218 344-571 4-236 (251)
442 PRK14251 phosphate ABC transpo 100.0 5.5E-40 1.2E-44 366.2 23.4 218 344-571 4-236 (251)
443 PRK13548 hmuV hemin importer A 100.0 1.2E-39 2.7E-44 363.7 26.0 217 344-570 2-230 (258)
444 TIGR02673 FtsE cell division A 100.0 3.5E-40 7.5E-45 359.0 21.0 201 345-558 2-214 (214)
445 PRK09984 phosphonate/organopho 100.0 6.6E-40 1.4E-44 367.6 23.8 222 1008-1247 4-251 (262)
446 PRK11124 artP arginine transpo 100.0 4.7E-40 1E-44 364.7 22.3 217 344-570 2-230 (242)
447 cd03225 ABC_cobalt_CbiO_domain 100.0 3E-40 6.5E-45 358.6 20.2 205 346-558 1-211 (211)
448 COG1131 CcmA ABC-type multidru 100.0 3.3E-40 7.2E-45 371.5 21.3 213 344-570 4-226 (293)
449 PRK13638 cbiO cobalt transport 100.0 1.2E-39 2.5E-44 367.0 25.7 216 345-570 2-225 (271)
450 PRK10253 iron-enterobactin tra 100.0 1.1E-39 2.4E-44 365.9 25.2 217 343-570 6-233 (265)
451 PRK14254 phosphate ABC transpo 100.0 1.3E-39 2.7E-44 367.9 25.8 220 342-571 37-270 (285)
452 TIGR01188 drrA daunorubicin re 100.0 4.2E-40 9E-45 375.7 22.1 200 1024-1235 6-214 (302)
453 PRK14261 phosphate ABC transpo 100.0 1E-39 2.2E-44 364.3 24.5 218 344-571 6-238 (253)
454 PRK10247 putative ABC transpor 100.0 4.3E-40 9.4E-45 360.1 21.0 211 344-566 7-223 (225)
455 cd03292 ABC_FtsE_transporter F 100.0 5.1E-40 1.1E-44 357.8 21.4 206 345-559 1-214 (214)
456 PRK14271 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 366.9 24.8 220 344-571 21-252 (276)
457 COG0411 LivG ABC-type branched 100.0 2.2E-40 4.7E-45 342.9 17.2 220 345-571 5-240 (250)
458 PRK14253 phosphate ABC transpo 100.0 1.4E-39 2.9E-44 362.7 24.9 218 344-571 3-234 (249)
459 PRK15112 antimicrobial peptide 100.0 1.5E-39 3.3E-44 364.9 25.4 232 344-582 4-251 (267)
460 PRK14260 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 364.9 24.1 219 343-571 6-244 (259)
461 cd03290 ABCC_SUR1_N The SUR do 100.0 1.4E-39 3E-44 355.0 24.0 210 346-558 2-218 (218)
462 COG1131 CcmA ABC-type multidru 100.0 7.6E-40 1.6E-44 368.6 22.6 214 1008-1235 4-227 (293)
463 cd03235 ABC_Metallic_Cations A 100.0 3.8E-40 8.2E-45 358.2 19.5 202 346-563 1-213 (213)
464 cd03246 ABCC_Protease_Secretio 100.0 8.4E-40 1.8E-44 342.5 21.4 172 345-559 1-173 (173)
465 TIGR03873 F420-0_ABC_ATP propo 100.0 9.2E-40 2E-44 365.1 22.7 221 345-570 2-226 (256)
466 PRK14262 phosphate ABC transpo 100.0 1.2E-39 2.7E-44 363.2 23.5 218 344-571 3-235 (250)
467 PRK10908 cell division protein 100.0 1.9E-39 4.1E-44 354.9 24.5 208 345-561 2-217 (222)
468 cd03269 ABC_putative_ATPase Th 100.0 4.5E-40 9.7E-45 356.8 19.3 205 345-563 1-210 (210)
469 PRK11144 modC molybdate transp 100.0 1.2E-39 2.5E-44 378.2 24.0 211 345-572 2-220 (352)
470 PRK10584 putative ABC transpor 100.0 1.5E-39 3.2E-44 357.5 23.7 212 344-562 6-227 (228)
471 PRK13547 hmuV hemin importer A 100.0 1.3E-39 2.9E-44 364.4 23.4 221 345-570 2-244 (272)
472 PRK14252 phosphate ABC transpo 100.0 2.5E-39 5.4E-44 363.3 25.6 221 341-571 13-250 (265)
473 PRK00349 uvrA excinuclease ABC 100.0 7.1E-39 1.5E-43 403.6 32.5 100 1136-1235 818-928 (943)
474 PRK11248 tauB taurine transpor 100.0 1E-39 2.2E-44 363.2 22.0 202 1009-1229 2-215 (255)
475 PRK13639 cbiO cobalt transport 100.0 1.3E-39 2.9E-44 366.7 23.3 217 345-570 2-226 (275)
476 cd03262 ABC_HisP_GlnQ_permease 100.0 6.7E-40 1.5E-44 356.6 20.1 205 345-559 1-213 (213)
477 COG1123 ATPase components of v 100.0 1.1E-39 2.4E-44 378.9 23.0 232 343-579 279-527 (539)
478 PRK14241 phosphate transporter 100.0 1.8E-39 3.8E-44 363.3 23.9 218 344-571 4-243 (258)
479 COG4598 HisP ABC-type histidin 100.0 3E-40 6.4E-45 320.2 15.2 227 344-580 6-251 (256)
480 PRK14265 phosphate ABC transpo 100.0 3.5E-39 7.5E-44 362.8 26.4 219 343-571 19-259 (274)
481 PRK14272 phosphate ABC transpo 100.0 2E-39 4.3E-44 362.2 24.2 220 344-571 4-237 (252)
482 TIGR02982 heterocyst_DevA ABC 100.0 1.4E-39 3E-44 355.3 22.2 208 1009-1223 2-219 (220)
483 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.9E-39 4.2E-44 352.1 23.2 201 345-563 1-211 (211)
484 TIGR02142 modC_ABC molybdenum 100.0 1.6E-39 3.5E-44 377.7 24.1 216 1013-1241 4-227 (354)
485 PRK15093 antimicrobial peptide 100.0 1.8E-39 3.9E-44 373.7 24.1 228 344-579 3-256 (330)
486 PRK14258 phosphate ABC transpo 100.0 2.4E-39 5.1E-44 362.4 24.4 219 343-571 6-246 (261)
487 PRK11701 phnK phosphonate C-P 100.0 2.6E-39 5.6E-44 362.0 24.6 218 344-571 6-242 (258)
488 PRK14275 phosphate ABC transpo 100.0 2.7E-39 5.9E-44 365.7 24.7 219 343-571 38-271 (286)
489 cd03233 ABC_PDR_domain1 The pl 100.0 1.8E-39 3.8E-44 348.6 22.0 191 1008-1227 3-202 (202)
490 PRK14266 phosphate ABC transpo 100.0 3.3E-39 7.2E-44 359.7 25.1 218 344-571 3-235 (250)
491 PRK10771 thiQ thiamine transpo 100.0 3.9E-39 8.4E-44 354.8 24.8 208 345-570 2-219 (232)
492 PRK09984 phosphonate/organopho 100.0 3.3E-39 7.2E-44 361.9 24.6 220 344-568 4-240 (262)
493 TIGR01188 drrA daunorubicin re 100.0 1.2E-39 2.5E-44 372.0 21.2 204 360-571 6-214 (302)
494 TIGR00968 3a0106s01 sulfate AB 100.0 2.5E-39 5.5E-44 357.0 22.8 215 345-571 1-221 (237)
495 TIGR02323 CP_lyasePhnK phospho 100.0 3.5E-39 7.5E-44 360.3 24.0 226 1008-1244 3-247 (253)
496 cd03228 ABCC_MRP_Like The MRP 100.0 2.6E-39 5.7E-44 338.0 21.4 171 1009-1222 1-171 (171)
497 cd03300 ABC_PotA_N PotA is an 100.0 1.8E-39 4E-44 357.1 21.2 214 345-570 1-220 (232)
498 PRK14264 phosphate ABC transpo 100.0 4.7E-39 1E-43 366.8 25.2 226 343-571 44-290 (305)
499 cd03229 ABC_Class3 This class 100.0 2.2E-39 4.7E-44 341.1 20.6 172 1009-1222 1-178 (178)
500 cd03234 ABCG_White The White s 100.0 2.1E-39 4.5E-44 355.5 20.9 214 345-563 4-226 (226)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.6e-220 Score=1996.99 Aligned_cols=1213 Identities=49% Similarity=0.802 Sum_probs=1112.0
Q ss_pred chHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 3 GNDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEG 82 (1255)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (1255)
++.+||+|+.+.|+.++++|++++++.|+..|++.++++.++|.+...... ...+....+++.+++++++.++..|++.
T Consensus 14 ~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~-~~~~~~~~~~l~~~~lg~~~~~~~~~q~ 92 (1228)
T KOG0055|consen 14 SFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNK-IASSEVSKVALYFVYLGVGVFISGFIQV 92 (1228)
T ss_pred chHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccch-hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999987644321 1113567788899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 83 LCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSF 162 (1255)
Q Consensus 83 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (1255)
.||.+.++|+..++|.+++++++||+++|||. +.+|++.+++++|++.|+++++++++.+++.+.+++.++++.|
T Consensus 93 ~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~-----~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F 167 (1228)
T KOG0055|consen 93 SCWMRTGERQTARIRSKYLKAILRQDIGWFDT-----NSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGF 167 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccceeec-----ccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 4558999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 000846 163 ILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELG 242 (1255)
Q Consensus 163 ~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~ 242 (1255)
+..|+|+++++++.|++++....+.+.+.+...+.+++++++.++++|++.+||||.+|+.|+.+.+||.+..+...+.+
T Consensus 168 ~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~g 247 (1228)
T KOG0055|consen 168 YYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFG 247 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 243 IKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEM 321 (1255)
Q Consensus 243 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~ 321 (1255)
++.+.+.++..+++ ++.+..+++.+|||+.++.++..++|.+++++++++.+...+.+..|++..+..+++|+.+|++.
T Consensus 248 i~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~ 327 (1228)
T KOG0055|consen 248 IKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFET 327 (1228)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHH
Confidence 99999999999888 78889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCc
Q 000846 322 VDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVE 401 (1255)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~ 401 (1255)
++..|++++....+......+|.|+|+||+|+||++|+.++|+|+||+|++||++||||||||||||++++|.|+|+|++
T Consensus 328 i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~ 407 (1228)
T KOG0055|consen 328 IDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTS 407 (1228)
T ss_pred hcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 99988877654333344567899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCC
Q 000846 402 GEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLG 481 (1255)
Q Consensus 402 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g 481 (1255)
|+|++||.|+++++.+|+|++||+|.|||.||++||+|||.||+|+++.+++.+||+++++++|+..||+||+|.+||+|
T Consensus 408 G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g 487 (1228)
T KOG0055|consen 408 GEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERG 487 (1228)
T ss_pred ceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEE
Q 000846 482 FQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVE 561 (1255)
Q Consensus 482 ~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~ 561 (1255)
.+|||||||||||||||++||+||||||||||||+++|+.++++|+++.+|||+|+|||||+++++||+|+||++|+|+|
T Consensus 488 ~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE 567 (1228)
T KOG0055|consen 488 VQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVE 567 (1228)
T ss_pred CCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCC
Q 000846 562 SGSHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVG 641 (1255)
Q Consensus 562 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1255)
.|+|+||++. .|.|++|++.|+.....+..++..+..... .. ... .+. ......+ .
T Consensus 568 ~G~h~ELi~~--~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~-------~~-s~~--~s~-----~~~~~~~-------~ 623 (1228)
T KOG0055|consen 568 QGTHDELIAL--GGIYSSLVRLQELEKAAEDEEEEESLKEER-------SR-SLK--SSS-----SSPSLSR-------G 623 (1228)
T ss_pred ecCHHHHHhc--cchHHHHHHHHhhhhhhhccccccchhhhh-------hh-ccc--ccc-----ccccccC-------C
Confidence 9999999996 499999999987655332100000000000 00 000 000 0000000 0
Q ss_pred CCCcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhh
Q 000846 642 TPYSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEI 721 (1255)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 721 (1255)
...........+++...... ........+++++++.+|+|+++++|++++++.|+.+|++++.++.++..+...+++..
T Consensus 624 ~~~~~~~~~~~~~e~~~~~~-~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~ 702 (1228)
T KOG0055|consen 624 SNRSNLLSVKPEGEDPEEPV-SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDEL 702 (1228)
T ss_pred cccccccccccccccccccc-ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHH
Confidence 00000000000000000000 11124567999999999999999999999999999999999999999999987766655
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHH
Q 000846 722 KSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSL 801 (1255)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~ 801 (1255)
......|+++|++++++..+..++++|++.+++++++.|+|.++|+++++++++|||+++|+ |.+.+|+.+|+..++..
T Consensus 703 ~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~ 781 (1228)
T KOG0055|consen 703 KREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAA 781 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHH
Confidence 55555699999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHH
Q 000846 802 VGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTIT 881 (1255)
Q Consensus 802 ~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr 881 (1255)
++..+..+++++..++++++++|+++|+++++++++.|++++..+.+.+++.....+.++..++....+.|++.|++||+
T Consensus 782 v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~ 861 (1228)
T KOG0055|consen 782 VGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVA 861 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q 000846 882 AFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVI 961 (1255)
Q Consensus 882 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1255)
+|+.|+++.+.|.+.++...+...++.++.++.+++++++.++.+++++|||++++.+|.+++.+++.+++++.+.+..+
T Consensus 862 al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~ 941 (1228)
T KOG0055|consen 862 ALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMAL 941 (1228)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEE
Q 000846 962 AEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVA 1041 (1255)
Q Consensus 962 ~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~va 1041 (1255)
++..++.|++.++..|+.+++++++++|+.++..+.+ ...++.+|+|+|+||+|+||+||+.+||+|+||+|++||++|
T Consensus 942 ~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~-~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvA 1020 (1228)
T KOG0055|consen 942 GQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSG-GKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVA 1020 (1228)
T ss_pred HHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCC-CccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEE
Confidence 9999999999999999999999999999776654222 122347899999999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHH
Q 000846 1042 LVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAA 1121 (1255)
Q Consensus 1042 IVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al 1121 (1255)
|||||||||||++.||.|||||++|.|.|||+||+++++++||++||+|+|||.||++||||||+||..+++++||.+|+
T Consensus 1021 LVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aa 1100 (1228)
T KOG0055|consen 1021 LVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAA 1100 (1228)
T ss_pred EECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999996669999999999
Q ss_pred HHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 000846 1122 VLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVV 1201 (1255)
Q Consensus 1122 ~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~ 1201 (1255)
+.|++|+||.+||+||||.|||+|.+||||||||||||||++|||+||||||||||||.++|+.||++|+++..|||+|+
T Consensus 1101 k~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~Iv 1180 (1228)
T KOG0055|consen 1101 KLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIV 1180 (1228)
T ss_pred HHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHhhhcC
Q 000846 1202 VAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQGG 1250 (1255)
Q Consensus 1202 IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~~~ 1250 (1255)
|||||+||++||.|+|+++|+|+|+|||++|+++ +|.|++|++.|..
T Consensus 1181 IAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~~--~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1181 IAHRLSTIQNADVIAVLKNGKVVEQGTHDELLAK--RGIYFRLVQLQSS 1227 (1228)
T ss_pred EecchhhhhcCCEEEEEECCEEEecccHHHHHhC--CCchHHHhhhccC
Confidence 9999999999999999999999999999999985 9999999998863
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=6.4e-175 Score=1728.12 Aligned_cols=1222 Identities=29% Similarity=0.479 Sum_probs=1019.6
Q ss_pred chHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 3 GNDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEG 82 (1255)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (1255)
+++++|+|+.++++.+++++++++++.++..|+++++++.++|.+... ..+..+++.+++++++.+++.+++.
T Consensus 46 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~ 118 (1466)
T PTZ00265 46 PFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLG-------ENVNDIIFSLVLIGIFQFILSFISS 118 (1466)
T ss_pred cHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 588999999999998999999999999999999999999999976421 1234445566777888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 83 LCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSF 162 (1255)
Q Consensus 83 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (1255)
+++.+.++++..++|.++|++++++|++|||. .++|++++++++|++.+++.+...+..++..+++++++++++|
T Consensus 119 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~-----~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~ 193 (1466)
T PTZ00265 119 FCMDVVTTKILKTLKLEFLKSVFYQDGQFHDN-----NPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSL 193 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997 5678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 000846 163 ILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELG 242 (1255)
Q Consensus 163 ~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~ 242 (1255)
+++|+|++++++++|+++++..++.+++++..++.++..++..+.++|.++|+++||+|+.|+.+.++|.+..+...+..
T Consensus 194 ~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~ 273 (1466)
T PTZ00265 194 FKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYI 273 (1466)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 243 IKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEK--------GEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKV 313 (1255)
Q Consensus 243 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~--------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (1255)
.+.....++..++. ++.++++++++|+|++++.+| .+++|.+++++++.+.....+..+.+.+..++.+..
T Consensus 274 ~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~ 353 (1466)
T PTZ00265 274 LKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLE 353 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888877666 556777889999999999875 578899988887777767777778888999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHH
Q 000846 314 AATRIFEMVDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALL 393 (1255)
Q Consensus 314 a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l 393 (1255)
|++||+++++.+++.+... .+...+. .+.|+++||+|+|+++++.++|+|+||+|++||++|||||||||||||+++|
T Consensus 354 a~~ri~~ii~~~~~~~~~~-~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL 431 (1466)
T PTZ00265 354 ATNSLYEIINRKPLVENND-DGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLI 431 (1466)
T ss_pred HHHHHHHHHcCCCCCCCCC-CCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 9999999999876543211 1111122 2479999999999865555799999999999999999999999999999999
Q ss_pred hcccCCCccEEEE-CCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCC--------------------------
Q 000846 394 QRFYDPVEGEVLL-DGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKD-------------------------- 446 (1255)
Q Consensus 394 ~g~~~~~~G~i~~-~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~-------------------------- 446 (1255)
+|+|+|++|+|++ ||+++++++.+++|++||||+|+|.||++||+|||.+|..
T Consensus 432 ~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (1466)
T PTZ00265 432 ERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKR 511 (1466)
T ss_pred HHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcccccccccccccccccc
Confidence 9999999999999 5799999999999999999999999999999999999741
Q ss_pred -------------------------------CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 447 -------------------------------GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 447 -------------------------------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
+.++++++++++.+++++++.++|+|++|.+|++|.+|||||||||+||
T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIA 591 (1466)
T PTZ00265 512 NSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIA 591 (1466)
T ss_pred ccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHH
Confidence 2456789999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhhcCEEEEEeCC----------------
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRTANLIMVLKAG---------------- 557 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~~d~i~vl~~G---------------- 557 (1255)
|||+++|+|||||||||+||+++++.+++.|+++. +|+|+|+||||+++++.||+|++|++|
T Consensus 592 RAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~ 671 (1466)
T PTZ00265 592 RAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPT 671 (1466)
T ss_pred HHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccc
Confidence 99999999999999999999999999999999985 489999999999999999999999986
Q ss_pred -------------------------------EEEEecChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhh
Q 000846 558 -------------------------------KVVESGSHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDA 606 (1255)
Q Consensus 558 -------------------------------~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1255)
+|+|+|+|+||++. ..|.|+.+++.|.........+....+.......
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~-~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~ 750 (1466)
T PTZ00265 672 KDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKN-KNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSA 750 (1466)
T ss_pred ccccccccccccccccccccccccccccCCceeEeeCCHHHHHhc-cCCcHHHHHhhhcccccccccccccccccccccc
Confidence 59999999999974 4799999998775432111000000000000000
Q ss_pred hhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCCCCCCCcc----ccccccCCCchHHHHHHHHhchhh
Q 000846 607 INLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYDPDDDSLG----DRIDQSSYATPSQWRLLKINMPEW 682 (1255)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1255)
... . ................. .................+...+... +..+........+++++++.++.+
T Consensus 751 ~~~-~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (1466)
T PTZ00265 751 YKD-S--ERGYDPDEMNGNSKHEN---ESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYK 824 (1466)
T ss_pred ccc-c--ccccccccccccccccc---cccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHH
Confidence 000 0 00000000000000000 0000000000000000000000000 000000111123455666666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 683 GSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVR 762 (1255)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr 762 (1255)
+.++++++++++.+++.|+++++++.+++.++.. .........|++++++++++..++.+++.++..++++++..++|
T Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR 902 (1466)
T PTZ00265 825 KDVTIIALSILVAGGLYPVFALLYAKYVSTLFDF--ANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMK 902 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788899999999999999999999999876532 12223345677888888899999999999999999999999999
Q ss_pred HHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 763 EKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVI 842 (1255)
Q Consensus 763 ~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~ 842 (1255)
.++|++++++|++|||.+++++|++++|+++|++.++..+...+..++..++.++++++++++++|.++++++++++++.
T Consensus 903 ~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~ 982 (1466)
T PTZ00265 903 RRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFM 982 (1466)
T ss_pred HHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997779999999999999999999999999999999999999999999999999888766555443
Q ss_pred HHHHHHHHHHHHHH--HH-------------HHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHH
Q 000846 843 GSYYSRNVLMKSMA--GK-------------ARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKH 907 (1255)
Q Consensus 843 ~~~~~~~~~~~~~~--~~-------------~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1255)
..+..+.+...... +. ..+........+.|++.|++|||+|+.|+++.++|.+..+...+...+.
T Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~ 1062 (1466)
T PTZ00265 983 RVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRK 1062 (1466)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 33322222211100 00 1223455678899999999999999999999999999999999988889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000846 908 SWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDR 987 (1255)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 987 (1255)
.+..+...++.+++..+..++++|+|++++..|.++++++++++.++.+...++..+.+.++++.++..+.+|++++++.
T Consensus 1063 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~ 1142 (1466)
T PTZ00265 1063 TLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIR 1142 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999888777766667888899999999999999999999988
Q ss_pred cCCCCCCCCCCcc--ccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC--
Q 000846 988 RSEIDPDSPQGRD--IKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-- 1063 (1255)
Q Consensus 988 ~~~~~~~~~~~~~--~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-- 1063 (1255)
+++.+........ .+....|.|+|+||+|+||++++.+||+|+||+|+|||++||||+||||||||+++|+|||+|
T Consensus 1143 ~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~ 1222 (1466)
T PTZ00265 1143 KSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKN 1222 (1466)
T ss_pred CCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcc
Confidence 6643221111111 012245789999999999977667899999999999999999999999999999999999999
Q ss_pred ----------------------------------------------------CCceEEECCeecCCCCHHHHhcceEEEc
Q 000846 1064 ----------------------------------------------------LKGSVFMDEQDIRNYNLKQLRSHIALVS 1091 (1255)
Q Consensus 1064 ----------------------------------------------------~~G~I~idG~di~~i~~~~lR~~i~~V~ 1091 (1255)
++|+|+|||+||+++++++||++|||||
T Consensus 1223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~ 1302 (1466)
T PTZ00265 1223 DHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVS 1302 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeC
Confidence 6999999999999999999999999999
Q ss_pred cCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEE
Q 000846 1092 QEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLL 1171 (1255)
Q Consensus 1092 Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlL 1171 (1255)
|||+||+|||||||+||+|+++++++++|++.|+++|||.+||+||||.|||+|.+|||||||||||||||+|+|+||||
T Consensus 1303 Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1303 QEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred CCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeC----CEE-EEecCHHHHHhhhcCchhHHH
Q 000846 1172 DEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQKSDTIAVIKN----GRV-VEQGSHNELVALSRGGAYYSL 1244 (1255)
Q Consensus 1172 DEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~----G~i-ve~G~~~eLl~~~~~g~y~~l 1244 (1255)
|||||+||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|.|+|+||+++ ++|.|++|
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~-~~g~Y~~l 1461 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSV-QDGVYKKY 1461 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhc-CCChHHHH
Confidence 99999999999999999999984 69999999999999999999999999 995 599999999973 38999999
Q ss_pred Hhhh
Q 000846 1245 IKPQ 1248 (1255)
Q Consensus 1245 ~~~~ 1248 (1255)
|+.|
T Consensus 1462 ~~~~ 1465 (1466)
T PTZ00265 1462 VKLA 1465 (1466)
T ss_pred Hhhc
Confidence 9876
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-166 Score=1562.99 Aligned_cols=1145 Identities=23% Similarity=0.328 Sum_probs=880.7
Q ss_pred HhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHc
Q 000846 30 GMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLC---WTRTAERQTSRMRMEYLKSVLR 106 (1255)
Q Consensus 30 ~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~lr~~~~~~ll~ 106 (1255)
+...| .++..+++.+..... ..+. . ++++++.+++.+++..+ +.+...+...++|..+...+.|
T Consensus 217 ~~~~P---~lL~~li~~~~~~~~------~~~~-g---~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~ 283 (1381)
T KOG0054|consen 217 GFVGP---LLLKKLILFFSEKRL------PLNN-G---YLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIYR 283 (1381)
T ss_pred ccccH---HHHHHHHHHhcCCCc------ccch-h---HHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHH
Confidence 45556 678888887654311 1111 1 11222223333333333 3445677888888877776666
Q ss_pred CCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Q 000846 107 QEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRL----SLAALPLTLMFIVP 182 (1255)
Q Consensus 107 ~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~l~~l~~~~l~~~~ 182 (1255)
+.+..-... .++.++|+++|.+++|++++.++. ..++.++...+-++++.++-|.. ++++++++.+++++
T Consensus 284 K~L~ls~~~-~~~~t~G~ivNlms~D~~ri~~~~-----~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~ 357 (1381)
T KOG0054|consen 284 KALRLSNSA-RGETTVGEIVNLMSVDAQRLSDAA-----CFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPL 357 (1381)
T ss_pred hhhcCchhh-ccCCCcchhhhhhhhhHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 665543332 234789999999999999999975 44555555555555555555553 57777777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 183 GLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSMGMIYVG 262 (1255)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (1255)
..+.++++.+.+.+.++..+++...++|.++|||+||.|+||+.+.++..+.++++.+.-.|.....++......+.- .
T Consensus 358 n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p-~ 436 (1381)
T KOG0054|consen 358 NSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSP-V 436 (1381)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999999999999999999999999999999888888887776665442211 1
Q ss_pred HHHHHHHHHHH-HhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccCCCc
Q 000846 263 WAFQAWVGSYL-VTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKALSYV 341 (1255)
Q Consensus 263 ~~~~~~~g~~l-v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~ 341 (1255)
.+....++++. ...+.+++..+|+.+.++...-.|+..+...+..+.++.+|.+|+.+++..++. ++......+..+.
T Consensus 437 lv~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~-~~~~~~~~~~~~~ 515 (1381)
T KOG0054|consen 437 LVSVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEEL-DPDSVERSPDEAG 515 (1381)
T ss_pred HHHHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-CccccccCCCCCC
Confidence 22333444444 445677888999988888888889988777899999999999999999986533 2211111122333
Q ss_pred cceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhc
Q 000846 342 RGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRS 421 (1255)
Q Consensus 342 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~ 421 (1255)
+..|+++|.+|+|.+....+.|+||||+|++|+.+||||+.|||||||+.+|+|+++..+|++.++|
T Consensus 516 ~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g------------- 582 (1381)
T KOG0054|consen 516 ENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG------------- 582 (1381)
T ss_pred CceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC-------------
Confidence 4579999999999764445699999999999999999999999999999999999999999999998
Q ss_pred ccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 422 QMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
.++||||+||+|+|||||||+||.| ...++..++.+.|+++++++.||.|+.|.|||+|.+|||||||||+||||+|+|
T Consensus 583 siaYv~Q~pWI~ngTvreNILFG~~-~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~ 661 (1381)
T KOG0054|consen 583 SVAYVPQQPWIQNGTVRENILFGSP-YDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQD 661 (1381)
T ss_pred eEEEeccccHhhCCcHHHhhhcCcc-ccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhcc
Confidence 5999999999999999999999986 344455555666788899999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHH-HHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHHH
Q 000846 502 PKILLLDEATSALDAQS-ERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQM 580 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~-~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~ 580 (1255)
+||++||||+||+|+|+ .+.+.++|+...++||+|+|||.++.+++||+|++|++|+|++.|+++|+++. +..+.++
T Consensus 662 adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~--~~~~~~l 739 (1381)
T KOG0054|consen 662 ADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKS--GGDFAEL 739 (1381)
T ss_pred CCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhc--chhHHHH
Confidence 99999999999999996 55667788888889999999999999999999999999999999999999973 5566666
Q ss_pred HHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCCCCCCCcccc
Q 000846 581 VELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYDPDDDSLGDR 660 (1255)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (1255)
....+...+.....+..+... ........... ..+..............+....++
T Consensus 740 ~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ee 795 (1381)
T KOG0054|consen 740 AHEEESEQEEEASEKDLESGE-----------------SSRESESRSLE-------SLSSEEEKSKDEKEEEDKLVQEEE 795 (1381)
T ss_pred hhccchhhccccccccccccc-----------------cccchhhhhhh-------hhcccccccccccchhhHHHHHHH
Confidence 322221111110000000000 00000000000 000000000000000000000111
Q ss_pred ccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHH
Q 000846 661 IDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNF 740 (1255)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1255)
.+.+......++++++. ...+....+.+++.+....+.....+|+++|.+.-...... ......+..+|.+++++..
T Consensus 796 ~~~G~v~~~vY~~Y~~a-~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~--~~~~~~~~~vY~~l~~~~~ 872 (1381)
T KOG0054|consen 796 RETGKVSWSVYKKYIKA-AGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT--TVSTSFYLGVYALLGVASS 872 (1381)
T ss_pred HhcCEeeHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc--CCCcchHHHHHHHHHHHHH
Confidence 12222333444555444 12222222233333444444445555666554321110000 0234567788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 741 ISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSY 820 (1255)
Q Consensus 741 i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~ 820 (1255)
++.+++.+.+...+.++++++|++++++++++||+||| .+|+|+|+|||++|++.+|..++..+..++++++.+++.+
T Consensus 873 ~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFd--tTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~ 950 (1381)
T KOG0054|consen 873 LLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFD--TTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGIL 950 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcC--CCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 8999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHcchHHHHHhccHHHHHHHHHHH
Q 000846 821 IVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQ----KEGSQLASEAVINHRTITAFSSQKRILGLFKET 896 (1255)
Q Consensus 821 ~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~ 896 (1255)
+++.+..|. ++++++|+.+++++++.+|.+. +++.++.. ....+|++|++.|+.|||||+.+++|.+++.+.
T Consensus 951 ~vi~~~~P~---fli~~~pl~v~~~~~~~~Y~~t-sReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~ 1026 (1381)
T KOG0054|consen 951 VVISYVTPW---FLIAIIPLGVIYYFVQRYYLAT-SRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDEL 1026 (1381)
T ss_pred HHhhHHhHH---HHHHHHHHHHHHHHHHHHHHHH-hHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHH
Confidence 888877764 4566778887777777777665 45555543 456789999999999999999999999999999
Q ss_pred HhchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 897 LRGPKEESLKHSWYSGIGLFS-SQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGS 975 (1255)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1255)
.|.+.+..+... .+..|.++ .+++..+....+..+.. +...+.+++|.+..++.+.+.....++...+...++++.+
T Consensus 1027 ~D~~~~~~f~~~-~a~RWla~Rle~ig~~~v~~~al~~v-l~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m 1104 (1381)
T KOG0054|consen 1027 IDENSRAFFLSI-SANRWLAVRLELLGNLVVLIAALFAV-LLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNM 1104 (1381)
T ss_pred hhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999887765432 22233333 23332222222222222 2222226788888888999999999999999999999999
Q ss_pred HHHHHHHHHHcccCCCCCCCCCC-ccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHH
Q 000846 976 NAVRSVFAILDRRSEIDPDSPQG-RDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTII 1054 (1255)
Q Consensus 976 ~a~~ri~~~~~~~~~~~~~~~~~-~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~ 1054 (1255)
++++|+.+|.+.++|.+...+.. ++..||.+|+|+|+|++.+|.+. .++|||||||+|+||||||||||||||||||+
T Consensus 1105 ~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~ 1183 (1381)
T KOG0054|consen 1105 VSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLI 1183 (1381)
T ss_pred hhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHH
Confidence 99999999999877732222222 56789999999999999999533 35799999999999999999999999999999
Q ss_pred HHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccc
Q 000846 1055 GLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMK 1134 (1255)
Q Consensus 1055 ~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp 1134 (1255)
++|+|+.+|.+|+|.|||+||+++++++||+++++|||||+||+||+|+||+..+ +++|++||+|++.|+++++|.++|
T Consensus 1184 ~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~-e~sD~~IW~ALe~~~Lk~~v~~~p 1262 (1381)
T KOG0054|consen 1184 LALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFD-EYSDDEIWEALERCQLKDVVSSLP 1262 (1381)
T ss_pred HHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCccc-ccCHHHHHHHHHHhChHHHHhhCC
Confidence 9999999999999999999999999999999999999999999999999995332 789999999999999999999999
Q ss_pred cccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCE
Q 000846 1135 DGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDT 1214 (1255)
Q Consensus 1135 ~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~ 1214 (1255)
+|||++|.|+|.|||.||||++||||||||++|||+|||||+++|++||..||++||+.|++||||+||||++||.||||
T Consensus 1263 ~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~Dr 1342 (1381)
T KOG0054|consen 1263 GGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDR 1342 (1381)
T ss_pred cCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCEEEEecCHHHHHhhhcCchhHHHHhhhc
Q 000846 1215 IAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQG 1249 (1255)
Q Consensus 1215 I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~~ 1249 (1255)
|+|||+|+|+|+|+|++|+++ +++.|++++.+..
T Consensus 1343 VlVld~G~v~EfdsP~~Ll~~-~~S~f~~~l~~~~ 1376 (1381)
T KOG0054|consen 1343 VLVLDAGRVVEFDSPAELLSD-KDSLFSSLLKEAA 1376 (1381)
T ss_pred EEEeeCCeEeecCChHHHHhC-CcchHHHHHHHHH
Confidence 999999999999999999986 7899987776543
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-157 Score=1576.81 Aligned_cols=1099 Identities=20% Similarity=0.253 Sum_probs=831.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 86 TRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILS 165 (1255)
Q Consensus 86 ~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1255)
.+.+.++...++..+|+++++++..+++. .++|+++|++++|++.+++++. .+..++...+.+++++++++..-
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~-----~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~l 439 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKK-----FTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQL 439 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCC-----CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777888888889999999999999885 7889999999999999999874 34445544444444444433322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Q 000846 166 WRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQ 245 (1255)
Q Consensus 166 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~ 245 (1255)
...++++++++.+++++..++.+++++..++.++..+++.+.+.|.++||++||+|++|+.+.+++.+.++++.+...+.
T Consensus 440 g~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~ 519 (1622)
T PLN03130 440 GVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKA 519 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223333334445555677788888888889999999999999999999999999999999999999888877766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000846 246 GFIKGLLMGSMGMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRT 325 (1255)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~ 325 (1255)
....++...+.... ...+.++++|++++..|.+++|.+++++.++.....|+..+...+..+.+++++++||.++++.+
T Consensus 520 ~~~~~~~~~~~~~~-~~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~ 598 (1622)
T PLN03130 520 QLLSAFNSFILNSI-PVLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAE 598 (1622)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 55554433322111 12345567888988899999999999988888888899888888999999999999999999765
Q ss_pred CCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCc-cEE
Q 000846 326 PAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVE-GEV 404 (1255)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~-G~i 404 (1255)
+..+... ....+..+.|+++|++|+|+.++++++|+|+||+|++||+++||||||||||||+++|+|+++|++ |+|
T Consensus 599 e~~~~~~---~~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I 675 (1622)
T PLN03130 599 ERVLLPN---PPLEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASV 675 (1622)
T ss_pred ccccccC---CcccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceE
Confidence 4321111 111112347999999999985444679999999999999999999999999999999999999999 999
Q ss_pred EECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCC
Q 000846 405 LLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQM 484 (1255)
Q Consensus 405 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~L 484 (1255)
.+ |++|+||+|+||||++||||||+||.+ .+++++.++++.|+++++++.||+|++|.+||+|.+|
T Consensus 676 ~l-------------~~~Iayv~Q~p~LfngTIreNI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~L 741 (1622)
T PLN03130 676 VI-------------RGTVAYVPQVSWIFNATVRDNILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNI 741 (1622)
T ss_pred EE-------------cCeEEEEcCccccCCCCHHHHHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCC
Confidence 85 458999999999999999999999986 5788899999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHH-HHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEec
Q 000846 485 SGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIV-QEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESG 563 (1255)
Q Consensus 485 SgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i-~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g 563 (1255)
||||||||+||||+|++|+||||||||||||+++++.+ .++++...+++|+|+|||+++.++.||+|++|++|+++++|
T Consensus 742 SGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~G 821 (1622)
T PLN03130 742 SGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEG 821 (1622)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeC
Confidence 99999999999999999999999999999999998766 56777777899999999999999999999999999999999
Q ss_pred ChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCC
Q 000846 564 SHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTP 643 (1255)
Q Consensus 564 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (1255)
+|+|++++ .+.|.++++.+....+....+......+. . ....... ...... . ..+.
T Consensus 822 t~~eL~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~-~~~~~~---~---~~~~--- 877 (1622)
T PLN03130 822 TYEELSNN--GPLFQKLMENAGKMEEYVEENGEEEDDQT--------S----SKPVANG-NANNLK---K---DSSS--- 877 (1622)
T ss_pred CHHHHHhc--chhHHHHHHhccccccccccccccccccc--------c----ccccccc-cccccc---c---cccc---
Confidence 99999874 57787777644321111000000000000 0 0000000 000000 0 0000
Q ss_pred CcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 000846 644 YSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKS 723 (1255)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 723 (1255)
..............++.+........++++++.... ++...+.+++.++..++....+++++.|.+..... ..
T Consensus 878 -~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-----~~ 950 (1622)
T PLN03130 878 -KKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGG-AWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPK-----TH 950 (1622)
T ss_pred -cccccccchhhhhHHHHhcCccCHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-----CC
Confidence 000000000000001011111122333334333222 22222223333333344444555666555422110 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHH
Q 000846 724 KSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVG 803 (1255)
Q Consensus 724 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~ 803 (1255)
....+.+++++++++..++.+++.+++.+.+.+++.++|++++++++++|++||| .+|+|++++|+++|++.++..++
T Consensus 951 ~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd--~~~~G~IlnR~s~Di~~id~~l~ 1028 (1622)
T PLN03130 951 GPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFH--TNPLGRIINRFAKDLGDIDRNVA 1028 (1622)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhc--cCCchHHHHHHHHHHHHHHHHHH
Confidence 2234566677888888889999999999999999999999999999999999999 78999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcchHHH
Q 000846 804 DRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMK---SMAGKARKAQKEGSQLASEAVINHRTI 880 (1255)
Q Consensus 804 ~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~l~g~~tI 880 (1255)
..+..++..++.+++.++++++++|... ++++|+.+.+++....+.+ ...+..........+++.|++.|++||
T Consensus 1029 ~~~~~~~~~~~~~i~~~i~i~~~~~~~~---~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tI 1105 (1622)
T PLN03130 1029 VFVNMFLGQIFQLLSTFVLIGIVSTISL---WAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTI 1105 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHH
Confidence 9999999999998888888888876332 2334443333333322222 222222333455678899999999999
Q ss_pred HHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CC-----HHHHHHHHHHH
Q 000846 881 TAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQEL-IT-----PEHLFQAFLIL 954 (1255)
Q Consensus 881 ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-~~-----~~~~~~~~~~~ 954 (1255)
|+|+.++++.+.+.+..+...+..........+.....+++ ...++++.+...+..+. .. .+.+..++.+.
T Consensus 1106 raf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~---~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~ 1182 (1622)
T PLN03130 1106 RAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETL---GGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYA 1182 (1622)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHH
Confidence 99999998888887777665544332221111111111111 11222222333333322 11 23333344455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCC-CCCccccccccccEEEEEEEEECCCCCCCccccceeEE
Q 000846 955 LFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDS-PQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLK 1033 (1255)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~-~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~ 1033 (1255)
......+..+...+..+++.+.+++|+.++++.++|.+... ...++..||.+|.|+|+||+|+|+++ .++||+||||+
T Consensus 1183 ~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~ 1261 (1622)
T PLN03130 1183 LNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFE 1261 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEE
Confidence 55666777777888899999999999999998776643211 11223346678999999999999643 34799999999
Q ss_pred EeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCC
Q 000846 1034 IEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADAR 1113 (1255)
Q Consensus 1034 I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~ 1113 (1255)
|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+|||||||++++ +++
T Consensus 1262 I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~t 1340 (1622)
T PLN03130 1262 ISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHN 1340 (1622)
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999886 579
Q ss_pred HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHh
Q 000846 1114 ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKM 1193 (1255)
Q Consensus 1114 ~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~ 1193 (1255)
|+|+++|++.+++++||.++|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.||++|++.
T Consensus 1341 deei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~ 1420 (1622)
T PLN03130 1341 DADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREE 1420 (1622)
T ss_pred HHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHhhhcC
Q 000846 1194 MMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQGG 1250 (1255)
Q Consensus 1194 ~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~~~ 1250 (1255)
+++||+|+||||++|+++||||+||++|+|+|+|+|+||+++ ++|.|++|++.++.
T Consensus 1421 ~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~-~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1421 FKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSN-EGSAFSKMVQSTGA 1476 (1622)
T ss_pred CCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhC-CCCHHHHHHHHcCh
Confidence 999999999999999999999999999999999999999985 57999999988754
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.2e-156 Score=1566.13 Aligned_cols=1094 Identities=20% Similarity=0.264 Sum_probs=825.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 86 TRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILS 165 (1255)
Q Consensus 86 ~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1255)
.+.+.++...++..+|+++++++..++++ .++|+++|++++|++.+++.+ ..+..++...+.++++++++ .
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~-----~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l---~ 436 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKN-----FASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLL---Y 436 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCC-----CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---H
Confidence 56778888888889999999999998885 788999999999999999986 33333433333333333222 2
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 000846 166 WRLSLAALPL---TLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELG 242 (1255)
Q Consensus 166 ~~l~l~~l~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~ 242 (1255)
+.+++.+++. +.+++++..++.++..+..++.++..+++.+.+.|.++||++||+|++|+.+.+++.+.++++.+..
T Consensus 437 ~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~ 516 (1495)
T PLN03232 437 QQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWF 516 (1495)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 2343333322 2333344667788888889999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000846 243 IKQGFIKGLLMGSMGMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMV 322 (1255)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 322 (1255)
.+.....++...+... ....+.++++|++++.+|.+++|.+++++.++.....|+..+...+..+.++++|++||.+++
T Consensus 517 ~~~~~~~~~~~~~~~~-~~~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L 595 (1495)
T PLN03232 517 RKAQLLSAFNSFILNS-IPVVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELL 595 (1495)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776655544332211 112233467889999899999999999998888888999888888899999999999999999
Q ss_pred cCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCcc
Q 000846 323 DRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEG 402 (1255)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 402 (1255)
+.+++.+... ....+..+.|+++|++|+|+.++++++|+|+||+|++||+++||||||||||||+++|+|+++|++|
T Consensus 596 ~~~~~~~~~~---~~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G 672 (1495)
T PLN03232 596 LSEERILAQN---PPLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAET 672 (1495)
T ss_pred cCcccccccc---CCcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCC
Confidence 8654322111 1111223479999999999854446799999999999999999999999999999999999999998
Q ss_pred EEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCC
Q 000846 403 EVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGF 482 (1255)
Q Consensus 403 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 482 (1255)
.+. .+|++|+||+|+||||++||||||+||.+ .+++++.++++.|+++++++.+|+|++|.+||+|.
T Consensus 673 ~i~------------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~ 739 (1495)
T PLN03232 673 SSV------------VIRGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGV 739 (1495)
T ss_pred CEE------------EecCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCc
Confidence 763 34779999999999999999999999985 67889999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHH-HHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEE
Q 000846 483 QMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQ-EAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVE 561 (1255)
Q Consensus 483 ~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~-~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~ 561 (1255)
+|||||||||+||||+|++|+||||||||||||+++++.+. ++++...+++|+|+||||++.++.||+|++|++|++++
T Consensus 740 ~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~ 819 (1495)
T PLN03232 740 NISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKE 819 (1495)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999988775 45666678999999999999999999999999999999
Q ss_pred ecChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCC
Q 000846 562 SGSHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVG 641 (1255)
Q Consensus 562 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1255)
+|+|+|++++ .+.|.++++.+....+..+... + .+.. . . .... . ........ ..
T Consensus 820 ~Gt~~eL~~~--~~~~~~l~~~~~~~~~~~~~~~--~-~~~~----~--~--~~~~-~--~~~~~~~~--------~~-- 873 (1495)
T PLN03232 820 EGTFAELSKS--GSLFKKLMENAGKMDATQEVNT--N-DENI----L--K--LGPT-V--TIDVSERN--------LG-- 873 (1495)
T ss_pred ecCHHHHHhc--chhHHHHHHhcccccccccccc--c-cccc----c--c--cccc-c--cccccccc--------cc--
Confidence 9999999874 5778887765432111100000 0 0000 0 0 0000 0 00000000 00
Q ss_pred CCCcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhh
Q 000846 642 TPYSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEI 721 (1255)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 721 (1255)
.. . ...........+++.+........++++++...+.| ...+.+++.++..++.....+|++.|.+. ... .
T Consensus 874 ~~-~-~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wl~~w~~~----~~~-~ 945 (1495)
T PLN03232 874 ST-K-QGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLW-VVMILLVCYLTTEVLRVSSSTWLSIWTDQ----STP-K 945 (1495)
T ss_pred cc-c-ccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCC-C
Confidence 00 0 000000000000111111222233334443322212 22222222222222222333444433221 100 0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHH
Q 000846 722 KSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSL 801 (1255)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~ 801 (1255)
......|..+|++++++..++.+++.+++.+.+.+++.++|++++++++++|++||| ++++|++++|+++|++.++..
T Consensus 946 ~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~--~~~~G~ilnr~s~Di~~id~~ 1023 (1495)
T PLN03232 946 SYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFH--TNPTGRVINRFSKDIGDIDRN 1023 (1495)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeC--cCCchHHHHHhHhhHHHHHHH
Confidence 112345667788888888999999999999999999999999999999999999999 789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcchH
Q 000846 802 VGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLM---KSMAGKARKAQKEGSQLASEAVINHR 878 (1255)
Q Consensus 802 ~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~l~g~~ 878 (1255)
++..+..++..++.+++.+++++++++... ++++|+.+.+++.+..+. +...+......+...+++.|++.|++
T Consensus 1024 l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~ 1100 (1495)
T PLN03232 1024 VANLMNMFMNQLWQLLSTFALIGTVSTISL---WAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLS 1100 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChH
Confidence 999999999988888888877777765332 223344333333222222 22223333444566788999999999
Q ss_pred HHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC----C-HHHHHHHHH
Q 000846 879 TITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLT-QELI----T-PEHLFQAFL 952 (1255)
Q Consensus 879 tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~-~~~~----~-~~~~~~~~~ 952 (1255)
|||+|+.++++.+++.+..+...+........ ..+..+. +..+...++++.+...+. .+.+ . .+.+..++.
T Consensus 1101 tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~wl~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~ 1177 (1495)
T PLN03232 1101 SIRAYKAYDRMAKINGKSMDNNIRFTLANTSS-NRWLTIR--LETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLS 1177 (1495)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHH
Confidence 99999999998888887776655544332211 1111111 111222222233333333 2322 1 122222344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCC-CCCCccccccccccEEEEEEEEECCCCCCCcccccee
Q 000846 953 ILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPD-SPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLS 1031 (1255)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~-~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs 1031 (1255)
+......++..+...+.+++.++.+++|+.++++.++|.+.. +...++..||.+|.|+|+||+|+|+++ .++||+|+|
T Consensus 1178 ~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~is 1256 (1495)
T PLN03232 1178 YTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLS 1256 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccce
Confidence 444555667788888999999999999999999877664321 111122346677899999999999532 357999999
Q ss_pred EEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCC
Q 000846 1032 LKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKAD 1111 (1255)
Q Consensus 1032 ~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~ 1111 (1255)
|+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+|||||||++++ +
T Consensus 1257 l~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~ 1335 (1495)
T PLN03232 1257 FFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-E 1335 (1495)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999876 6
Q ss_pred CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHH
Q 000846 1112 ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALE 1191 (1255)
Q Consensus 1112 ~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~ 1191 (1255)
++|+|+++|++.+++++||.++|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.||++|+
T Consensus 1336 ~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~ 1415 (1495)
T PLN03232 1336 HNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIR 1415 (1495)
T ss_pred CCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHhhhcC
Q 000846 1192 KMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQGG 1250 (1255)
Q Consensus 1192 ~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~~~ 1250 (1255)
+.+++||+|+||||++++++||||+||++|+|+|+|+|+||+++ ++|.|++|++.++.
T Consensus 1416 ~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~-~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1416 EEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSR-DTSAFFRMVHSTGP 1473 (1495)
T ss_pred HHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCCHHHHHHHHhCh
Confidence 99999999999999999999999999999999999999999986 45799999988764
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.4e-151 Score=1524.44 Aligned_cols=1174 Identities=19% Similarity=0.237 Sum_probs=865.7
Q ss_pred HHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccc
Q 000846 34 PLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFD 113 (1255)
Q Consensus 34 p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~ 113 (1255)
...|++++.+++.+...... . .....++..++++.++.+++.....+...+.+.++...++..+|+|+++++..+++
T Consensus 334 ~~~P~ll~~li~~~~~~~~~-~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~ 410 (1522)
T TIGR00957 334 FIGPQILSLLIRFVNDPMAP-D--WQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNSARK 410 (1522)
T ss_pred HHHHHHHHHHHHHhcCCCcc-c--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhcC
Confidence 33447888899865432111 0 11111222222223333334333334456778999999999999999999999888
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 114 TQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIVPGLLFGKLMMGV 193 (1255)
Q Consensus 114 ~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~ 193 (1255)
. .++|+++|++++|++++.+... .+..+....+.+++++++++..-.+.+++.++++++++++..++.+.+++.
T Consensus 411 ~-----~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~ 484 (1522)
T TIGR00957 411 S-----STVGEIVNLMSVDAQRFMDLAT-YINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTY 484 (1522)
T ss_pred C-----CCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 7889999999999999998553 333444444444444433332222234555666677777788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 194 IMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSMGMIYVGWAFQAWVGSYL 273 (1255)
Q Consensus 194 ~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 273 (1255)
.++.++..+++.+.+.|.++||++||+|++|+.+.+++.+.++++.+...+......+...... .....+..+.++.+.
T Consensus 485 ~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~ 563 (1522)
T TIGR00957 485 QVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWV-CTPFLVALITFAVYV 563 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988887766655555443222211 111122233345566
Q ss_pred Hhh--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccCCC-ccceEEEEeE
Q 000846 274 VTE--KGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKALSY-VRGEIEFRDV 350 (1255)
Q Consensus 274 v~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~-~~~~i~~~~v 350 (1255)
+.. +.++++.+++++.++.....|+..+...+..+.++++|.+||.++++.+++... ........+ ..+.|+++|+
T Consensus 564 ~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~~~ 642 (1522)
T TIGR00957 564 TVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPD-SIERRTIKPGEGNSITVHNA 642 (1522)
T ss_pred HhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc-cccccccCCCCCCcEEEEEe
Confidence 653 467889999888777777889988888999999999999999999986543211 100011111 1237999999
Q ss_pred EEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCC
Q 000846 351 YFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEP 430 (1255)
Q Consensus 351 ~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~ 430 (1255)
+|+|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+|| +|+||+|+|
T Consensus 643 ~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~yv~Q~~ 708 (1522)
T TIGR00957 643 TFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG-------------SVAYVPQQA 708 (1522)
T ss_pred EEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------------EEEEEcCCc
Confidence 9999743 35699999999999999999999999999999999999999999999987 699999999
Q ss_pred ccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCC
Q 000846 431 VLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEA 510 (1255)
Q Consensus 431 ~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEp 510 (1255)
|+|++||+|||.+|.+ ...++..++++.+++.+++..+|+|++|.+|++|.+|||||||||+||||++++|+|+|||||
T Consensus 709 ~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp 787 (1522)
T TIGR00957 709 WIQNDSLRENILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDP 787 (1522)
T ss_pred cccCCcHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999999999875 345566777788888899999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHH---hcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHHHHHHHhhc
Q 000846 511 TSALDAQSERIVQEAIDK---VSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVELQQMA 587 (1255)
Q Consensus 511 ts~lD~~~~~~i~~~l~~---~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~ 587 (1255)
||+||+++++.+.+.+.+ +.+++|+|+|||+++.+..||+|++|++|+++++|+++++.++ .+.|.++...+...
T Consensus 788 ~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~--~~~~~~l~~~~~~~ 865 (1522)
T TIGR00957 788 LSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQR--DGAFAEFLRTYAPD 865 (1522)
T ss_pred ccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhc--chhHHHHHHhhccc
Confidence 999999999999998853 4568999999999999999999999999999999999999873 56777776544321
Q ss_pred ccCCCCCCCcCC---ccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCCC-CCCCc--cccc
Q 000846 588 SENDTSNDTFND---FSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYDP-DDDSL--GDRI 661 (1255)
Q Consensus 588 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~ 661 (1255)
.+....+..... .+................................................... ..... ++..
T Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 945 (1522)
T TIGR00957 866 EQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKA 945 (1522)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHHHHH
Confidence 111000000000 00000000000000000000000000000000000000000000000000000 00000 0000
Q ss_pred cccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHH
Q 000846 662 DQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFI 741 (1255)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 741 (1255)
.........++.+++.. .+...++.+++.++...+..+.+++++.|.+..... ........+..+|++++++..+
T Consensus 946 ~~g~v~~~~y~~Y~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~---~~~~~~~~~~~iy~~l~i~~~~ 1020 (1522)
T TIGR00957 946 QTGQVELSVYWDYMKAI--GLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVN---GTQNNTSLRLSVYGALGILQGF 1020 (1522)
T ss_pred hcCcccHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---CCCCCcchHHHHHHHHHHHHHH
Confidence 11111223344444332 222222223333333444455566666665421100 0011122344567777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 742 SSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYI 821 (1255)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~ 821 (1255)
+.++..+++.+.+.++..++|++++++++++|++||| .+++|+++||+++|++.++..++..+..++..++.+++.++
T Consensus 1021 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~--~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li 1098 (1522)
T TIGR00957 1021 AVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFE--RTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALI 1098 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999999999999999999999999 78999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchH
Q 000846 822 VGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPK 901 (1255)
Q Consensus 822 ~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~ 901 (1255)
++++.+|.+++++++++++.+.......+..+...+...+..+...+++.|++.|++|||+|+.++++.+++.+..+...
T Consensus 1099 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~ 1178 (1522)
T TIGR00957 1099 VILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQ 1178 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 88888886655444333332222212212222223333444566789999999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 902 EESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLT-QELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRS 980 (1255)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~r 980 (1255)
+..........+.....+++.. .++++.+...+. .+.++.|.+..++.+......++..+...+.+++.++.+++|
T Consensus 1179 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eR 1255 (1522)
T TIGR00957 1179 KAYYPSIVANRWLAVRLECVGN---CIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVER 1255 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765544433333333333322 233344444443 578999999999999999999999999999999999999999
Q ss_pred HHHHHcccCCCCCC-CCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhc
Q 000846 981 VFAILDRRSEIDPD-SPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLER 1059 (1255)
Q Consensus 981 i~~~~~~~~~~~~~-~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~r 1059 (1255)
+.++++.++|.+.. +...++..||.+|.|+|+||+|+|+++ .++||+||||+|+|||+||||||||||||||+++|+|
T Consensus 1256 i~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~r 1334 (1522)
T TIGR00957 1256 LKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFR 1334 (1522)
T ss_pred HHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 99999877654321 111223346778999999999999754 2479999999999999999999999999999999999
Q ss_pred ccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHcccccccc
Q 000846 1060 FYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDT 1139 (1255)
Q Consensus 1060 l~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt 1139 (1255)
+|+|++|+|+|||+||++++++++|++|++|||||+||+|||||||++.. +++|+|+++|++.++++++|.++|+||||
T Consensus 1335 l~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt 1413 (1522)
T TIGR00957 1335 INESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDH 1413 (1522)
T ss_pred CccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCc
Confidence 99999999999999999999999999999999999999999999997433 68999999999999999999999999999
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEe
Q 000846 1140 YCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIK 1219 (1255)
Q Consensus 1140 ~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~ 1219 (1255)
+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.||++|++.+++||+|+||||++++.+||||+|||
T Consensus 1414 ~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld 1493 (1522)
T TIGR00957 1414 ECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLD 1493 (1522)
T ss_pred eecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecCHHHHHhhhcCchhHHHHhhhc
Q 000846 1220 NGRVVEQGSHNELVALSRGGAYYSLIKPQG 1249 (1255)
Q Consensus 1220 ~G~ive~G~~~eLl~~~~~g~y~~l~~~~~ 1249 (1255)
+|+|+|+|+|+||+++ +|.|++|+++.+
T Consensus 1494 ~G~IvE~G~~~eLl~~--~~~f~~l~~~~g 1521 (1522)
T TIGR00957 1494 KGEVAEFGAPSNLLQQ--RGIFYSMAKDAG 1521 (1522)
T ss_pred CCEEEEECCHHHHHhC--CCHHHHHHHHcC
Confidence 9999999999999986 799999998753
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.6e-145 Score=1459.70 Aligned_cols=1171 Identities=18% Similarity=0.212 Sum_probs=863.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 20 LFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRME 99 (1255)
Q Consensus 20 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 99 (1255)
++.+++.++..++....|++++.+++.+.... ... .....+++.+++..++..++.....+...+.+.++-..+...
T Consensus 247 ~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~-~~~--~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~~ 323 (1560)
T PTZ00243 247 WWQIPFKLLSDVCTLTLPVLLKYFVKFLDADN-ATW--GRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNAL 323 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444445577888887653221 100 011111222223333444444445556667788888888889
Q ss_pred HHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 100 YLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMF 179 (1255)
Q Consensus 100 ~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~ 179 (1255)
+|+|+++++...+... +.++|+++|.+++|++.+.+++.. +..++...+.+++++++++.+..+.+++.+++++++
T Consensus 324 if~K~l~ls~~~~~~~---~~~~G~i~nl~s~Dv~~i~~~~~~-~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~ 399 (1560)
T PTZ00243 324 IFEKCFTISSKSLAQP---DMNTGRIINMMSTDVERINSFMQY-CMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVT 399 (1560)
T ss_pred HHHHHHhCChhhhCCC---CCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999999887766421 257899999999999999999844 445555666666666666666666788888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 180 IVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSMGMI 259 (1255)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (1255)
+++..++.++..+..++.++..+++.+.+.|.++|||+||.++||+.+.+++.+.++++.+...+.....++...+....
T Consensus 400 ~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~ 479 (1560)
T PTZ00243 400 LPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFVNNAT 479 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999888887666666655443332111
Q ss_pred HHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-----CCCC--
Q 000846 260 YVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAI-----DTDD-- 332 (1255)
Q Consensus 260 ~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~-----~~~~-- 332 (1255)
...+..+.++++.+..+.++++.+|+++.++..+..|+..+...+..+.++.+|++||.++++.++.. +...
T Consensus 480 -p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~ 558 (1560)
T PTZ00243 480 -PTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYW 558 (1560)
T ss_pred -HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccchhhc
Confidence 11223334567788888999999999999999999999988889999999999999999999764310 0000
Q ss_pred ------cc--c------------------------------------------ccCCCccceEEEEeEEEEcCCC-----
Q 000846 333 ------KM--G------------------------------------------KALSYVRGEIEFRDVYFCYPSR----- 357 (1255)
Q Consensus 333 ------~~--~------------------------------------------~~~~~~~~~i~~~~v~~~y~~~----- 357 (1255)
.. . +......+.+.++|++|.++..
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1560)
T PTZ00243 559 REQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHI 638 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccccccccccccccccccc
Confidence 00 0 0000012357788887765410
Q ss_pred --------------------------------CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEE
Q 000846 358 --------------------------------PDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVL 405 (1255)
Q Consensus 358 --------------------------------~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~ 405 (1255)
.++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.
T Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~ 718 (1560)
T PTZ00243 639 VEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVW 718 (1560)
T ss_pred ccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEE
Confidence 124589999999999999999999999999999999999999999998
Q ss_pred ECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCC
Q 000846 406 LDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMS 485 (1255)
Q Consensus 406 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 485 (1255)
++ ++||||+|+||+|++||+|||.++.+ ...+++.++.+.++++++++.+|+|++|.+|++|.+||
T Consensus 719 ~~-------------~~i~yv~Q~~~l~~~Tv~enI~~~~~-~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LS 784 (1560)
T PTZ00243 719 AE-------------RSIAYVPQQAWIMNATVRGNILFFDE-EDAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLS 784 (1560)
T ss_pred EC-------------CeEEEEeCCCccCCCcHHHHHHcCCh-hhHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCC
Confidence 64 47999999999999999999999864 23455677778888999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecC
Q 000846 486 GGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQE-AIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGS 564 (1255)
Q Consensus 486 gGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~ 564 (1255)
|||||||+||||++.+|+|||||||||+||+++.+.+.+ ++....+|+|+|+|||+++.+..||+|++|++|+++++|+
T Consensus 785 GGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~ 864 (1560)
T PTZ00243 785 GGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVEFSGS 864 (1560)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999999999999998777655 4544556899999999999999999999999999999999
Q ss_pred hhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCC
Q 000846 565 HNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPY 644 (1255)
Q Consensus 565 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (1255)
++++++. +.|..+........+...... ..+.... . . .......... ...... .... ..
T Consensus 865 ~~~l~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~--~--~~~~~~~~~~-~~~~~~----~~~~----~~ 923 (1560)
T PTZ00243 865 SADFMRT---SLYATLAAELKENKDSKEGDA-DAEVAEV----D--A--APGGAVDHEP-PVAKQE----GNAE----GG 923 (1560)
T ss_pred HHHHHhC---hHHHHHHHhhccccccccccc-ccccccc----c--c--cccccccccc-cccccc----cccc----cc
Confidence 9999863 456666543221111000000 0000000 0 0 0000000000 000000 0000 00
Q ss_pred cccccCCCCCCC--ccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhh
Q 000846 645 SYTIQYDPDDDS--LGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIK 722 (1255)
Q Consensus 645 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 722 (1255)
. ....+..... ..++..........++++++.... +...+..+++.++...+.....++++.|..... .
T Consensus 924 ~-~~~~~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~-~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~-------~ 994 (1560)
T PTZ00243 924 D-GAALDAAAGRLMTREEKASGSVPWSTYVAYLRFCGG-LHAAGFVLATFAVTELVTVSSGVWLSMWSTRSF-------K 994 (1560)
T ss_pred c-ccccccccchhhhHHHHhcCcccHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-------C
Confidence 0 0000000000 000001111222333333333211 111111112222222333333444444332110 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHH
Q 000846 723 SKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLV 802 (1255)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~ 802 (1255)
.....+..+|+++.++..+..+++.+.....+.+...++|++++++++++|++||| .+++|+++||+++|++.+++.+
T Consensus 995 ~~~~~~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd--~~~~G~ilnR~s~Di~~id~~l 1072 (1560)
T PTZ00243 995 LSAATYLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFD--TTPLGRILNRFSRDIDILDNTL 1072 (1560)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhcc--CCCccHHHHHHHhhHHHHHHHH
Confidence 11223445555566666666667777777777888899999999999999999999 7899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcchHH
Q 000846 803 GDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMK---SMAGKARKAQKEGSQLASEAVINHRT 879 (1255)
Q Consensus 803 ~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~l~g~~t 879 (1255)
+..+..++..++.+++.++++++.+|.+. ++++|+.++++++...+.+ ...+..........+++.|++.|++|
T Consensus 1073 ~~~l~~~~~~~~~~i~~li~~~~~~p~~~---~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~t 1149 (1560)
T PTZ00243 1073 PMSYLYLLQCLFSICSSILVTSASQPFVL---VALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSAT 1149 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHH
Confidence 99999999999999999988888887433 3333443333333333322 22222333455678999999999999
Q ss_pred HHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHcCCCCHHHHHHHHHHHHHH
Q 000846 880 ITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRL--LTQELITPEHLFQAFLILLFT 957 (1255)
Q Consensus 880 Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l--~~~~~~~~~~~~~~~~~~~~~ 957 (1255)
||+|+.++++.++|.+..+...+..........+.....+++..+...++.+++... ...+.++++.+..++.+....
T Consensus 1150 Iraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l 1229 (1560)
T PTZ00243 1150 ITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQT 1229 (1560)
T ss_pred HHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999988887776555444444445555544444444444333 234457788777777777788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCC-------------------------CCCcc---ccccccccE
Q 000846 958 AYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDS-------------------------PQGRD---IKRQMRGRI 1009 (1255)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~-------------------------~~~~~---~~~~~~g~I 1009 (1255)
..++..+...+.+++.++.+++|+.++++..++++... +..++ +.++..|.|
T Consensus 1230 ~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I 1309 (1560)
T PTZ00243 1230 TATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSL 1309 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeE
Confidence 88899999999999999999999999997543321000 00001 123346889
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEE
Q 000846 1010 ELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIAL 1089 (1255)
Q Consensus 1010 ~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1089 (1255)
+|+||+|+|++. .++||+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++
T Consensus 1310 ~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~i 1388 (1560)
T PTZ00243 1310 VFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSM 1388 (1560)
T ss_pred EEEEEEEEeCCC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceE
Confidence 999999999743 3469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC-CCE
Q 000846 1090 VSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN-PSI 1168 (1255)
Q Consensus 1090 V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~-p~I 1168 (1255)
|||||+||+|||||||++++ +++|+|+++|++.++++++|.++|+||||.|||+|.+|||||||||||||||+++ |+|
T Consensus 1389 VpQdp~LF~gTIreNIdp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~I 1467 (1560)
T PTZ00243 1389 IPQDPVLFDGTVRQNVDPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGF 1467 (1560)
T ss_pred ECCCCccccccHHHHhCccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCE
Confidence 99999999999999997653 7899999999999999999999999999999999999999999999999999996 899
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHhhh
Q 000846 1169 LLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQ 1248 (1255)
Q Consensus 1169 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~ 1248 (1255)
||||||||+||++||+.|+++|++.+++||+|+||||++++.+||+|+||++|+|+|+|+|+||+++ ++|.|++|++.+
T Consensus 1468 LlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~-~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1468 ILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMN-RQSIFHSMVEAL 1546 (1560)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999975 589999999887
Q ss_pred cC
Q 000846 1249 GG 1250 (1255)
Q Consensus 1249 ~~ 1250 (1255)
+.
T Consensus 1547 ~~ 1548 (1560)
T PTZ00243 1547 GR 1548 (1560)
T ss_pred Ch
Confidence 53
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.4e-143 Score=1435.50 Aligned_cols=1175 Identities=18% Similarity=0.203 Sum_probs=842.4
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 25 GSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSV 104 (1255)
Q Consensus 25 ~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l 104 (1255)
+..+..++.| ++++.+++.+.... .... .....+++.++++.++..++.....+.....+.++-..+...+|+|+
T Consensus 91 ~~~~~~~~~P---~ll~~li~~~~~~~-~~~~-~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~ 165 (1490)
T TIGR01271 91 FGEATKAVQP---LLLGRIIASYDPFN-APER-EIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKT 165 (1490)
T ss_pred HHHHHHHHHH---HHHHHHHHHhccCC-CCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334445555 67888888653211 1000 11111222223333344444444555556667777777777789999
Q ss_pred HcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 105 LRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIVPGL 184 (1255)
Q Consensus 105 l~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~~~~ 184 (1255)
++++...++. .++|+++|++++|++++.+++... ..+....+.+++++++++.+..+.+++.++++++++++..
T Consensus 166 L~l~~~~~~~-----~~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~ 239 (1490)
T TIGR01271 166 LKLSSRVLDK-----ISTGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQA 239 (1490)
T ss_pred HhCCHHHhcC-----CCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998885 788999999999999999987643 2333444445556666666666678888888889899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 185 LFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSMGMIYVGWA 264 (1255)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (1255)
++.+++.+..++.++..+++.+.+.|.++||++||+|+||+.+.+++.+.++++.+...+...+..+...+. ......+
T Consensus 240 ~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~-~~~~~~~ 318 (1490)
T TIGR01271 240 CLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAF-FFSGFFV 318 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 999999999999999999999999999999999999999999999999999888887777666554333322 1122234
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccCCCccc
Q 000846 265 FQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVL-GALPNLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKALSYVRG 343 (1255)
Q Consensus 265 ~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (1255)
.++.++++.+..+ .+++.+|+++.++.....|+. .+...+..+.++.+|++||.++++.++... .. . .....
T Consensus 319 ~~~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~-~~---~--~~~~~ 391 (1490)
T TIGR01271 319 VFLSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKT-LE---Y--NLTTT 391 (1490)
T ss_pred HHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-cc---c--cCCCC
Confidence 4556666766544 688899988877766666765 455668889999999999999998653211 10 0 01123
Q ss_pred eEEEEeEEEEcCCCC-------------------------------CCccccceeEEecCCCEEEEEcCCCCcHHHHHHH
Q 000846 344 EIEFRDVYFCYPSRP-------------------------------DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIAL 392 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~-------------------------------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~ 392 (1255)
.|+++|++|.|+... ..++|+|+||+|++||+++|+||||||||||+++
T Consensus 392 ~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~ 471 (1490)
T TIGR01271 392 EVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMM 471 (1490)
T ss_pred ceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHH
Confidence 599999999995310 1358999999999999999999999999999999
Q ss_pred HhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCc
Q 000846 393 LQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDG 472 (1255)
Q Consensus 393 l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g 472 (1255)
|+|+++|++|+|.++| +|+||+|+||+|++||+|||.||.+ ...++..++++.+++.+++..+|+|
T Consensus 472 l~G~~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g 537 (1490)
T TIGR01271 472 IMGELEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEK 537 (1490)
T ss_pred HhCCCCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhcccc
Confidence 9999999999999998 5999999999999999999999864 3344455666777888999999999
Q ss_pred ccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCCeEEEEecCchhhhhcCEE
Q 000846 473 YETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQE-AIDKVSKGRTTLIIAHRLSTIRTANLI 551 (1255)
Q Consensus 473 ~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~~~~~~~~d~i 551 (1255)
++|.+|++|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+ ++.++.+|+|+|+|||+++.+..||+|
T Consensus 538 ~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~i 617 (1490)
T TIGR01271 538 DKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKI 617 (1490)
T ss_pred ccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEE
Confidence 9999999999999999999999999999999999999999999999999887 467777899999999999999889999
Q ss_pred EEEeCCEEEEecChhHHhccCCCChhHHHHHHHhhcc----cC-----CC------CC--CC----cCCc-----cchhh
Q 000846 552 MVLKAGKVVESGSHNELMNRGEGGEYYQMVELQQMAS----EN-----DT------SN--DT----FNDF-----SHQMD 605 (1255)
Q Consensus 552 ~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~----~~-----~~------~~--~~----~~~~-----~~~~~ 605 (1255)
++|++|++++.|+++++.+. .+.|...+....... +. .+ .+ .. .++. .+...
T Consensus 618 i~l~~g~i~~~g~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (1490)
T TIGR01271 618 LLLHEGVCYFYGTFSELQAK--RPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPE 695 (1490)
T ss_pred EEEECCEEEEEcCHHHHHhc--ChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999863 345554442100000 00 00 00 00 0000 00000
Q ss_pred hhhhh-------h---------------ccCCCCCCcccCCCCC-----------CCCCCCCCC----------CC----
Q 000846 606 AINLY-------K---------------RTIAPSPMSMRSSAAS-----------TPALNPFSP----------AL---- 638 (1255)
Q Consensus 606 ~~~~~-------~---------------~~~~~~~~~~~~~~~~-----------~~~~~~~~~----------~~---- 638 (1255)
..... . ................ .+...+... ..
T Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (1490)
T TIGR01271 696 FAEKRKQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSV 775 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccch
Confidence 00000 0 0000000000000000 000000000 00
Q ss_pred ----cC---CC--CC----cc----c--------c---------cCCC-----C---CCC-----cc-ccccccCCCchH
Q 000846 639 ----SV---GT--PY----SY----T--------I---------QYDP-----D---DDS-----LG-DRIDQSSYATPS 670 (1255)
Q Consensus 639 ----~~---~~--~~----~~----~--------~---------~~~~-----~---~~~-----~~-~~~~~~~~~~~~ 670 (1255)
.. .. .. .. . . ..+. . ++. .. +...........
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~v 855 (1490)
T TIGR01271 776 LQLMTHSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNT 855 (1490)
T ss_pred hhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHH
Confidence 00 00 00 00 0 0 0000 0 000 00 000001122223
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h-cCChh-h-h---------hhhHHHH-HHHHHHH
Q 000846 671 QWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIY--F-RTDKS-E-I---------KSKSRTL-SLFFLGV 735 (1255)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~-~~~~~-~-~---------~~~~~~~-~~~~~~~ 735 (1255)
++++++... .+..+++.+++.++...+..+..+|+..+...- + ..... . . .....++ ..+++++
T Consensus 856 Y~~Y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1490)
T TIGR01271 856 YLRYITTNR-NLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGT 934 (1490)
T ss_pred HHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHH
Confidence 334433321 222222223333333334444444444332100 0 00000 0 0 0011122 2334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000846 736 AVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFG 815 (1255)
Q Consensus 736 ~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~ 815 (1255)
.++..++.+++.+++.+.+.+.+.++|.+++++++++|++||+ .+|+|+++|||++|++.++..++..+..++..++.
T Consensus 935 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~--~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~ 1012 (1490)
T TIGR01271 935 ADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLN--TMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLI 1012 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556667778888899999999999999999999999999998 78999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHH
Q 000846 816 SVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMK---SMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGL 892 (1255)
Q Consensus 816 ~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~ 892 (1255)
+++.++++++++|.++++ ++|+++++++.+..+.+ ...+...........++.|++.|+.|||+|+.++++.++
T Consensus 1013 ~i~~l~~i~~~~p~l~l~---~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~ 1089 (1490)
T TIGR01271 1013 VLGAIFVVSVLQPYIFIA---AIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETL 1089 (1490)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHH
Confidence 999999988888875443 34444333333333332 222233344456778999999999999999999999999
Q ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 893 FKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTA--LAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSD 970 (1255)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 (1255)
+.+..+...+..........+......++..+... +.++++. ..++.+.+..++.+.......+..+...+.+
T Consensus 1090 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-----~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~ 1164 (1490)
T TIGR01271 1090 FHKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGT-----NQDGEGEVGIILTLAMNILSTLQWAVNSSID 1164 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998876544433222222222222222211111 1122222 2234455555555555666677778888899
Q ss_pred HHHHHHHHHHHHHHHcccCCCCCCCC---------------CCccccccccccEEEEEEEEECCCCCCCccccceeEEEe
Q 000846 971 ISKGSNAVRSVFAILDRRSEIDPDSP---------------QGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIE 1035 (1255)
Q Consensus 971 ~~~~~~a~~ri~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~ 1035 (1255)
++..+.+++|+.++++.+++...... ..++..||..|.|+|+||+|+|++. ++++|+||||+|+
T Consensus 1165 le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~ 1243 (1490)
T TIGR01271 1165 VDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVE 1243 (1490)
T ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEc
Confidence 99999999999999987665432111 0112347778999999999999743 4679999999999
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHH
Q 000846 1036 AGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARES 1115 (1255)
Q Consensus 1036 ~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ 1115 (1255)
|||+||||||||||||||+++|+|+|+ ++|+|+|||+||++++++++|++|++|||||+||+||||+||++.. +++|+
T Consensus 1244 ~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tde 1321 (1490)
T TIGR01271 1244 GGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDE 1321 (1490)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHH
Confidence 999999999999999999999999998 7999999999999999999999999999999999999999997653 57999
Q ss_pred HHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC
Q 000846 1116 EIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM 1195 (1255)
Q Consensus 1116 ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~ 1195 (1255)
++|+|++.++++++|.++|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|++.++
T Consensus 1322 ei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~ 1401 (1490)
T TIGR01271 1322 EIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFS 1401 (1490)
T ss_pred HHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHhhhcC
Q 000846 1196 GRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQGG 1250 (1255)
Q Consensus 1196 ~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~~~ 1250 (1255)
+||||+||||++++.+||||+||++|+|+|.|+|++|++. +|.|++|++++..
T Consensus 1402 ~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~--~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1402 NCTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE--TSLFKQAMSAADR 1454 (1490)
T ss_pred CCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC--CcHHHHHHHHhCh
Confidence 9999999999999999999999999999999999999974 8999999987653
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-112 Score=990.11 Aligned_cols=574 Identities=37% Similarity=0.574 Sum_probs=545.8
Q ss_pred hHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 669 PSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHY 748 (1255)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 748 (1255)
..+|+++.+..++|+++..+.++.++......+.|++.+++++.+...++ ........+..+.++.++..++..++.+
T Consensus 133 ~~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~--~~~~~~~~~~~l~~l~~~~a~~~~~r~~ 210 (716)
T KOG0058|consen 133 TLLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDD--SADALKRACTILLGLFLIGALANAIRGG 210 (716)
T ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999998876221 2334445566777888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 749 SFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSW 828 (1255)
Q Consensus 749 ~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~ 828 (1255)
++.++++++..++|..+|+++++++++||| +|.+|++++|+++|+..+.+.++..+...+.+.+..++++++|+++||
T Consensus 211 ~~~~a~~rv~~rlR~~lF~sil~QdiaFFD--~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~ 288 (716)
T KOG0058|consen 211 LLQYAGERVVARLRTDLFRSLLRQDIAFFD--ENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSW 288 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhc--cCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhH
Confidence 999999999999999999999999999999 788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHH
Q 000846 829 RLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHS 908 (1255)
Q Consensus 829 ~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (1255)
.|+++.++.+|++++...+..++.++.+++.++..++.+..+.|.+.+++|||+|+.|++..++|.+..++..+...|..
T Consensus 289 ~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a 368 (716)
T KOG0058|consen 289 RLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEA 368 (716)
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Q 000846 909 WYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRR 988 (1255)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~ 988 (1255)
.....++..+++...+....++|||++++..|.++.|++.+++++.......+..+...++++.++..|.+|+++++|++
T Consensus 369 ~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~ 448 (716)
T KOG0058|consen 369 VAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRK 448 (716)
T ss_pred HHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceE
Q 000846 989 SEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSV 1068 (1255)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I 1068 (1255)
|..+.+. ...|...+|.|+|+||+|+||+||+.+||+|+||+|+|||+||+||||||||||++++|+|||+|++|+|
T Consensus 449 P~i~~~G---~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~I 525 (716)
T KOG0058|consen 449 PRIPLTG---TLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRI 525 (716)
T ss_pred CCCCCCC---ccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 9876552 1112136899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCC
Q 000846 1069 FMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQL 1148 (1255)
Q Consensus 1069 ~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~L 1148 (1255)
++||+||++++.++||++||+|.|||+||++||+|||.||.+++++|||.+|+++|++||||.++|+||||.|||+|.+|
T Consensus 526 llDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qL 605 (716)
T KOG0058|consen 526 LLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQL 605 (716)
T ss_pred EECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000846 1149 SGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGS 1228 (1255)
Q Consensus 1149 SgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~ 1228 (1255)
||||||||||||||+|||+||||||||||||.++|..||++|++..+++|||+|||||+||++||+|+|+++|+|+|.|+
T Consensus 606 SGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~ 685 (716)
T KOG0058|consen 606 SGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGT 685 (716)
T ss_pred cchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCchhHHHHhhhcC
Q 000846 1229 HNELVALSRGGAYYSLIKPQGG 1250 (1255)
Q Consensus 1229 ~~eLl~~~~~g~y~~l~~~~~~ 1250 (1255)
|+|||++ ++|.|++|+++|..
T Consensus 686 h~eLl~~-~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 686 HDELLSK-PNGLYAKLVQRQLD 706 (716)
T ss_pred HHHHhhC-cccHHHHHHHHhcc
Confidence 9999997 67999999999853
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-106 Score=944.97 Aligned_cols=574 Identities=37% Similarity=0.571 Sum_probs=530.1
Q ss_pred chHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 3 GNDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEG 82 (1255)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (1255)
.+++|+.|+.+. |..+..++++.++.....-+.|.++|+++|.... ...+. +.+...+..+.++.++..++.+++.
T Consensus 134 ~~~rl~~l~~~~-~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~-~~~~~--~~~~~~~~~l~~l~~~~a~~~~~r~ 209 (716)
T KOG0058|consen 134 LLKRLLGLLKPE-WKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISE-GDDSA--DALKRACTILLGLFLIGALANAIRG 209 (716)
T ss_pred HHHHHHHHhchh-HHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHh-ccchH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356899998765 4455667666666666666666899999998765 11111 3455556677778888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 83 LCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSF 162 (1255)
Q Consensus 83 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (1255)
+++.++++++..++|.++|+++++|+++|||. +.+|+++||++.|+..+.+.++..+...+.+++..++++++||
T Consensus 210 ~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~-----nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~ 284 (716)
T KOG0058|consen 210 GLLQYAGERVVARLRTDLFRSLLRQDIAFFDE-----NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMF 284 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-----CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence 99999999999999999999999999999997 7888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 000846 163 ILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELG 242 (1255)
Q Consensus 163 ~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~ 242 (1255)
++||+|+++.++.+|+++++..++++..++..++.|++.++++..++|.+.+|||||+|+.|+.+.+||.+..++..+..
T Consensus 285 ~~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~ 364 (716)
T KOG0058|consen 285 SLSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLS 364 (716)
T ss_pred hhhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 243 IKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEM 321 (1255)
Q Consensus 243 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~ 321 (1255)
.|.+...+.+...+ ...+.....++|+|++++..|.+|.|.+.++++|......++..+...++.++++..|.+|++|+
T Consensus 365 ~k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel 444 (716)
T KOG0058|consen 365 KKEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFEL 444 (716)
T ss_pred HHHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 99888888887776 56667788899999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCc
Q 000846 322 VDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVE 401 (1255)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~ 401 (1255)
+|.+|..+.+. ...+...+|.|+|+||+|+||.+|+.++|+|+||+|+|||+||+||||||||||++++|.++|+|++
T Consensus 445 ~dr~P~i~~~G--~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pts 522 (716)
T KOG0058|consen 445 MDRKPRIPLTG--TLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTS 522 (716)
T ss_pred hccCCCCCCCC--ccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 99998876441 1122257899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCC
Q 000846 402 GEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLG 481 (1255)
Q Consensus 402 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g 481 (1255)
|+|.+||+||++++.+++|++||+|.|||.||++||+|||.||.+++++|++.+|++++++|+||..+|+||||.|||+|
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKG 602 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEE
Q 000846 482 FQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVE 561 (1255)
Q Consensus 482 ~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~ 561 (1255)
.+|||||||||||||||++||.||||||+|||||+++|..|+++|.+..+++|||+|+|||+++++||+|+|+++|+|+|
T Consensus 603 ~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E 682 (716)
T KOG0058|consen 603 SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVE 682 (716)
T ss_pred ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhHHhccCCCChhHHHHHHHhhcc
Q 000846 562 SGSHNELMNRGEGGEYYQMVELQQMAS 588 (1255)
Q Consensus 562 ~g~~~~l~~~~~~~~~~~~~~~~~~~~ 588 (1255)
.|+|+||+++ .++.|+++++.|....
T Consensus 683 ~G~h~eLl~~-~~gly~~Lv~~q~~~~ 708 (716)
T KOG0058|consen 683 MGTHDELLSK-PNGLYAKLVQRQLDSG 708 (716)
T ss_pred cccHHHHhhC-cccHHHHHHHHhcccC
Confidence 9999999997 4689999998876543
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.5e-103 Score=965.11 Aligned_cols=575 Identities=42% Similarity=0.708 Sum_probs=542.9
Q ss_pred chHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 3 GNDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEG 82 (1255)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (1255)
++.+++++..| +|+++++|++++++.|+.+|++.+++++++..+...+.+... .....|+++++++++..+++.+++.
T Consensus 651 s~~~i~k~~~p-e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~-~~~~~~al~f~~l~~~~~i~~~~q~ 728 (1228)
T KOG0055|consen 651 SFWRIFKLNKP-EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELK-REVRAWALIFLGLGIVSGITNFLQH 728 (1228)
T ss_pred cHHHHHHhccc-hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999866 788899999999999999999999999999988754322222 2233488889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 83 LCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSF 162 (1255)
Q Consensus 83 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (1255)
+++..+++++..|+|..+|+++++++++|||.. +++ |.|.+|+.+|...++..+++.+..+++++..+++++++.|
T Consensus 729 ~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~---~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf 804 (1228)
T KOG0055|consen 729 YFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDP---ENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAF 804 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---ccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999984 455 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 000846 163 ILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELG 242 (1255)
Q Consensus 163 ~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~ 242 (1255)
+++|+|+++++++.|++++..+...+.+.....+..+...+++.++.|++.|||||++|+.|+++.+.|.+..++..+..
T Consensus 805 ~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~ 884 (1228)
T KOG0055|consen 805 IYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSS 884 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 243 IKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEM 321 (1255)
Q Consensus 243 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~ 321 (1255)
.|.+.+.++.+++. .++++.+++.+|+|++++.+|.+++..++.+++.+.+....+.+.....+++.+++.|+.+|+++
T Consensus 885 ~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i 964 (1228)
T KOG0055|consen 885 FKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEI 964 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 99999999999988 88899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCc
Q 000846 322 VDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVE 401 (1255)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~ 401 (1255)
+|++|+++++.+.+...++.+|+|+|+||+|+||++|+.++|+|+||+|++||++||||||||||||++.+|.|+|+|++
T Consensus 965 ~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~ 1044 (1228)
T KOG0055|consen 965 LDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDA 1044 (1228)
T ss_pred hcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 99998777654334445678899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCC
Q 000846 402 GEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLG 481 (1255)
Q Consensus 402 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g 481 (1255)
|.|.|||+|++++++++||++||.|+|||.||++||||||+||.+.++.+|+.+||+.+++|+||..||+||||.|||+|
T Consensus 1045 G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG 1124 (1228)
T KOG0055|consen 1045 GKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERG 1124 (1228)
T ss_pred CeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCccc
Confidence 99999999999999999999999999999999999999999996668999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEE
Q 000846 482 FQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVE 561 (1255)
Q Consensus 482 ~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~ 561 (1255)
.+||||||||||||||++|||+||||||+|||||.++|+.+|++|++.+.|||+|+|+|||+++++||.|+|+++|+|+|
T Consensus 1125 ~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE 1204 (1228)
T KOG0055|consen 1125 VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVE 1204 (1228)
T ss_pred CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhHHhccCCCChhHHHHHHHh
Q 000846 562 SGSHNELMNRGEGGEYYQMVELQQ 585 (1255)
Q Consensus 562 ~g~~~~l~~~~~~~~~~~~~~~~~ 585 (1255)
+|+|++|++ .+|.|+++++.|.
T Consensus 1205 ~GtH~~L~~--~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1205 QGTHDELLA--KRGIYFRLVQLQS 1226 (1228)
T ss_pred cccHHHHHh--CCCchHHHhhhcc
Confidence 999999999 5899999988764
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1e-94 Score=885.78 Aligned_cols=567 Identities=31% Similarity=0.477 Sum_probs=525.2
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 672 WRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFS 751 (1255)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 751 (1255)
.+++....++|..+.-.++.+++..++..+.|++...++|..... ...+.....++.+++.+++..+..+++.+.+.
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~---~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPD---ASRSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556666666677777777777888888888888877643 22344555667777888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 752 VMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLT 831 (1255)
Q Consensus 752 ~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~ 831 (1255)
+.+.++...+-.++|+|++++|++||. ++++|++++|+ +|.+.+++++...+...+..+..+++.++++++++|.++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~--~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~ 296 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFE--KRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLT 296 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHcc--CCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997 78999999999 789999999999999999989999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHH
Q 000846 832 LVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYS 911 (1255)
Q Consensus 832 l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1255)
++.++.+|+.++..+...+++++..++..+..+...+...|++.|++|||+.+.|.++..+|++.+.+..+..++.....
T Consensus 297 li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~ 376 (709)
T COG2274 297 LIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLA 376 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999988899998888888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCC
Q 000846 912 GIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEI 991 (1255)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 991 (1255)
.....+.+++..+..++++|+|++++..|.+|+|+++++.+....+..++..+...+.+++....+.+|+.++++.++|.
T Consensus 377 ~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~ 456 (709)
T COG2274 377 LILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQ 456 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred CCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEEC
Q 000846 992 DPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMD 1071 (1255)
Q Consensus 992 ~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~id 1071 (1255)
+.+.. ....++..|+|+|+||+|+|+.+ ++++|+|+||+|+|||+|||||+||||||||+|+|.|+|+|++|+|++|
T Consensus 457 ~~~~~--~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~d 533 (709)
T COG2274 457 EGDKT--LIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLD 533 (709)
T ss_pred ccccc--cccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 54332 12234468999999999999755 3479999999999999999999999999999999999999999999999
Q ss_pred CeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChH
Q 000846 1072 EQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGG 1151 (1255)
Q Consensus 1072 G~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgG 1151 (1255)
|+|++++++.++|++|+|||||++||+|||||||++++|++++||+++||+.+++|+||.++|.||||+|||+|.+||||
T Consensus 534 g~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGG 613 (709)
T COG2274 534 GVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGG 613 (709)
T ss_pred CEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHH
Q 000846 1152 QKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNE 1231 (1255)
Q Consensus 1152 QkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~e 1231 (1255)
|||||+|||||++||+||||||||||||++||+.|.+.|.+..++||+|+||||++++++||||+|||+|||+|+|+|+|
T Consensus 614 QrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~e 693 (709)
T COG2274 614 QRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEE 693 (709)
T ss_pred HHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCchhHHHHhhhc
Q 000846 1232 LVALSRGGAYYSLIKPQG 1249 (1255)
Q Consensus 1232 Ll~~~~~g~y~~l~~~~~ 1249 (1255)
|++. +|.|+++|+.|.
T Consensus 694 ll~~--~g~y~~l~~~q~ 709 (709)
T COG2274 694 LLAQ--GGLYARLYQQQE 709 (709)
T ss_pred HHHh--cChHHHHHhccC
Confidence 9996 999999998763
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6.6e-90 Score=843.37 Aligned_cols=547 Identities=33% Similarity=0.491 Sum_probs=503.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 21 FGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEY 100 (1255)
Q Consensus 21 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~ 100 (1255)
+..++..+.++..| ++...++|....... . +.+....+.+++++++.+++.+++.+...+.+.|+..++-.++
T Consensus 161 ~~sl~l~i~~l~~p---~~~q~viD~Vl~~~~--~--~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~ 233 (709)
T COG2274 161 LASLLLQLLALATP---LFSQIVIDKVLPDAS--R--STLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRF 233 (709)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHhhhccCc--h--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 33344444555555 677888998654321 1 4566666777778888899999999999999999999999999
Q ss_pred HHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 101 LKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFI 180 (1255)
Q Consensus 101 ~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~ 180 (1255)
++|++++|++||.+ .++|++++|+ +|.+.|+++++..+...+.+++++++.+++|++++|+|++++++.+|+++
T Consensus 234 ~~hll~Lpl~~f~~-----r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~ 307 (709)
T COG2274 234 FRHLLRLPLSYFEK-----RSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNV 307 (709)
T ss_pred HHHHHcCcHHHccC-----CChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997 7788999999 69999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000846 181 VPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSM-GMI 259 (1255)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 259 (1255)
++..++.+.+++..++..+..++.++...|++.||++||+.+.|..+..+|++...+..+.+.+..........+. .+.
T Consensus 308 l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 387 (709)
T COG2274 308 LITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQ 387 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988887776666 555
Q ss_pred HHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccCC
Q 000846 260 YVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKALS 339 (1255)
Q Consensus 260 ~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~ 339 (1255)
.+..++++|+|+++|++|++|.|.++++.+.......|+..+...+..+++++.+.+|+.++++.++|.+.+.. ....+
T Consensus 388 ~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-~~~~~ 466 (709)
T COG2274 388 QLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-LIHLP 466 (709)
T ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-ccccc
Confidence 67788899999999999999999999999999999999999999999999999999999999999887543221 23456
Q ss_pred CccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHH
Q 000846 340 YVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWL 419 (1255)
Q Consensus 340 ~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~ 419 (1255)
+..|+|+|+||+|+|+.++ +++|+|+||+|+|||++||||+||||||||+|+|.|+|+|++|+|++||.|++++++..+
T Consensus 467 ~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~l 545 (709)
T COG2274 467 KLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASL 545 (709)
T ss_pred ccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHH
Confidence 6789999999999998653 479999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 420 RSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 420 r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
|++||||+||+.||+|||+|||+++.|+.++|++++||+.+++|+||.++|.||+|.+||+|.+||||||||++|||||+
T Consensus 546 R~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl 625 (709)
T COG2274 546 RRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALL 625 (709)
T ss_pred HhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHH
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQ 579 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 579 (1255)
++|+||||||||||||+++|+.|.+.|.+..+|+|+|+||||++++++||||+||++|+|+++|+|+|+++. .|.|++
T Consensus 626 ~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~--~g~y~~ 703 (709)
T COG2274 626 SKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ--GGLYAR 703 (709)
T ss_pred cCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh--cChHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985 789999
Q ss_pred HHHHH
Q 000846 580 MVELQ 584 (1255)
Q Consensus 580 ~~~~~ 584 (1255)
++..|
T Consensus 704 l~~~q 708 (709)
T COG2274 704 LYQQQ 708 (709)
T ss_pred HHhcc
Confidence 88654
No 14
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=9.6e-88 Score=837.15 Aligned_cols=561 Identities=38% Similarity=0.580 Sum_probs=502.2
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 673 RLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSV 752 (1255)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 752 (1255)
+++++.+ .+ .+.++.++.++...+....+++++.+++... ........+..+++++.++..++.++..+...+
T Consensus 6 ~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 78 (567)
T COG1132 6 RLLKYLK-YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALL-----ADLGELLELLLLLLLLALLGGVLRALQSYLGSR 78 (567)
T ss_pred HHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344433 56 7777777788888888888888888888776 111222334445555666777888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 753 MGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTL 832 (1255)
Q Consensus 753 ~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l 832 (1255)
.+.+...++|.++++++++.|++||+ ++++|++++|+++|++.++..+......+...++.+++.+++++..+|.+++
T Consensus 79 ~~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 156 (567)
T COG1132 79 LGQKIVADLRRDLFEKLLRLPLSFFD--KAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLAL 156 (567)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHhC--cCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 88999999999999999999999999 6789999999999999999999988666666788899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHH
Q 000846 833 VMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSG 912 (1255)
Q Consensus 833 ~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1255)
++++..|++........+..+...+..++..++....+.|.+.|+++||+|+.++...+++.+..+...+...+..+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (567)
T COG1132 157 ILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEA 236 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888776666555555677777888888999999999999999999999999999999999999888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q 000846 913 IGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEID 992 (1255)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 992 (1255)
...++...+..+..++++++|..++..+.+++|.+.+++.+......++..+......+..+..+.+|++++++.+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~ 316 (567)
T COG1132 237 LLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVE 316 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999866533
Q ss_pred CCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECC
Q 000846 993 PDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDE 1072 (1255)
Q Consensus 993 ~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG 1072 (1255)
..... .....|+|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||
T Consensus 317 ~~~~~----~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg 390 (567)
T COG1132 317 DPPDP----LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDG 390 (567)
T ss_pred CCCCC----CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECC
Confidence 22111 1224578999999999974 45799999999999999999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHH
Q 000846 1073 QDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1073 ~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1152 (1255)
+||++++.++||++|++|||||+||+|||+|||++|+|+++|||+++|++.++++|||.++|+||||.|||+|.+|||||
T Consensus 391 ~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQ 470 (567)
T COG1132 391 IDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQ 470 (567)
T ss_pred EehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHH
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
|||||||||++++|||||||||||+||++||+.|++++++..++||+|+||||++|+++||+|+|||+|+|+|.|+|+||
T Consensus 471 rQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eL 550 (567)
T COG1132 471 RQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEEL 550 (567)
T ss_pred HHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred HhhhcCchhHHHHhhhcC
Q 000846 1233 VALSRGGAYYSLIKPQGG 1250 (1255)
Q Consensus 1233 l~~~~~g~y~~l~~~~~~ 1250 (1255)
+++ +|.|++||+.|..
T Consensus 551 l~~--~g~y~~l~~~~~~ 566 (567)
T COG1132 551 LAK--GGLYARLYQAQGG 566 (567)
T ss_pred HHc--CCHHHHHHHHhhc
Confidence 986 9999999998864
No 15
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=8.4e-87 Score=833.84 Aligned_cols=568 Identities=21% Similarity=0.314 Sum_probs=487.4
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 671 QWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSF 750 (1255)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 750 (1255)
+++++++.++.++.++++++++++..++.+..|++++.+++.....+.. ......+...++++.++..++.+++.+..
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP--REALLPPFILLILLFVLRALLAWLRERVG 87 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557777888888888999999999999999999999999876421111 11122233445555667778888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 751 SVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRL 830 (1255)
Q Consensus 751 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l 830 (1255)
.+.+.++..++|.++|++++++|++||+ ++++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+
T Consensus 88 ~~~~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 165 (588)
T PRK11174 88 FKAGQHIRQQIRQQVLDKLQQLGPAWIQ--GKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAA 165 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhc--cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 77899999999999999999999999999999899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHH
Q 000846 831 TLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWY 910 (1255)
Q Consensus 831 ~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1255)
++++++++|+.+.......+..+...++..+..++....+.|.++|+++||+|+.|+++.++|.+..++..+...+..+.
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (588)
T PRK11174 166 GLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRM 245 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988887776666666666666777777888899999999999999999999999999999999998888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 911 SGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHL---------FQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSV 981 (1255)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri 981 (1255)
......+..++..+...++.++++..+ .|.+++|++ +.++++......++..+...+..+..+..+.+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri 324 (588)
T PRK11174 246 AFLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESL 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766666666666665555555555544 377777754 1112333345577888888899999999999999
Q ss_pred HHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc
Q 000846 982 FAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFY 1061 (1255)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~ 1061 (1255)
.++++.+++.+.... .+.+.+..+.|+|+||+|.|++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|
T Consensus 325 ~~~l~~~~~~~~~~~--~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~ 400 (588)
T PRK11174 325 VTFLETPLAHPQQGE--KELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL 400 (588)
T ss_pred HHHHcCCCcccCCCc--cccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 999987653221111 0111112457999999998863 357999999999999999999999999999999999999
Q ss_pred CCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHcccccccccc
Q 000846 1062 DPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYC 1141 (1255)
Q Consensus 1062 ~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~v 1141 (1255)
|++|+|++||+|+++++.+++|++|+||||||+||+|||||||++|+|+++|||+++|++.+++++||.++|+||||.|
T Consensus 401 -p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~v 479 (588)
T PRK11174 401 -PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPI 479 (588)
T ss_pred -CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCC
Q 000846 1142 GERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNG 1221 (1255)
Q Consensus 1142 ge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G 1221 (1255)
||+|.+||||||||||||||++++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++.+||+|+||++|
T Consensus 480 ge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G 559 (588)
T PRK11174 480 GDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDG 559 (588)
T ss_pred ccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred EEEEecCHHHHHhhhcCchhHHHHhhhcC
Q 000846 1222 RVVEQGSHNELVALSRGGAYYSLIKPQGG 1250 (1255)
Q Consensus 1222 ~ive~G~~~eLl~~~~~g~y~~l~~~~~~ 1250 (1255)
+++|.|+|+||+++ +|.|++|++.|.+
T Consensus 560 ~i~e~G~~~eL~~~--~~~y~~l~~~q~~ 586 (588)
T PRK11174 560 QIVQQGDYAELSQA--GGLFATLLAHRQE 586 (588)
T ss_pred eEeecCCHHHHHhc--chHHHHHHHHhhc
Confidence 99999999999985 8999999988764
No 16
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=4.7e-86 Score=837.36 Aligned_cols=565 Identities=32% Similarity=0.495 Sum_probs=505.5
Q ss_pred hHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 669 PSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHY 748 (1255)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 748 (1255)
..+++++++.++.|+.+..++++.++..++....|++++.+++....... .........+++++.++..+..+++.+
T Consensus 147 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (711)
T TIGR00958 147 DLLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKG---PPALASAIFFMCLLSIASSVSAGLRGG 223 (711)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888888888888888888888889999999999987753221 111112233344555667777888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 749 SFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSW 828 (1255)
Q Consensus 749 ~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~ 828 (1255)
++.+.+.++..++|+++|++++++|++||+ ++++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|
T Consensus 224 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~--~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~ 301 (711)
T TIGR00958 224 SFNYTMARINLRIREDLFRSLLRQDLGFFD--ENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSP 301 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999998 678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHH
Q 000846 829 RLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHS 908 (1255)
Q Consensus 829 ~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (1255)
.+++++++.+|+.+.......+..++..++.++..++....+.|++.|+++||+|+.|+++.++|.+..++..+...+..
T Consensus 302 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 381 (711)
T TIGR00958 302 RLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKA 381 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888887777766677777777778888888999999999999999999999999999999999998888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Q 000846 909 WYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRR 988 (1255)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~ 988 (1255)
............+..+..++++++|++++..|.++.|+++++..+......++..+.....++.++..+.+|+.++++.+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~ 461 (711)
T TIGR00958 382 LAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRK 461 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77777777777778888888999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceE
Q 000846 989 SEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSV 1068 (1255)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I 1068 (1255)
++.+.... ..+++..+.|+|+||+|+||+++++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|
T Consensus 462 ~~~~~~~~---~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I 538 (711)
T TIGR00958 462 PNIPLTGT---LAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQV 538 (711)
T ss_pred CCCCCCCC---CCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE
Confidence 65432211 112234578999999999987666789999999999999999999999999999999999999999999
Q ss_pred EECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCC
Q 000846 1069 FMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQL 1148 (1255)
Q Consensus 1069 ~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~L 1148 (1255)
++||+|+++++.+++|++|+||||||++|+|||||||.+|.++.+|+++++|++.+++++|++++|+||||.+||+|.+|
T Consensus 539 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~L 618 (711)
T TIGR00958 539 LLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQL 618 (711)
T ss_pred EECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcC
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000846 1149 SGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGS 1228 (1255)
Q Consensus 1149 SgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~ 1228 (1255)
|||||||||||||++++|+|||||||||+||+++|+.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+
T Consensus 619 SGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt 696 (711)
T TIGR00958 619 SGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGT 696 (711)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeC
Confidence 9999999999999999999999999999999999999999 33457999999999999999999999999999999999
Q ss_pred HHHHHhhhcCchhHHHH
Q 000846 1229 HNELVALSRGGAYYSLI 1245 (1255)
Q Consensus 1229 ~~eLl~~~~~g~y~~l~ 1245 (1255)
|+||+++ +|.|++|+
T Consensus 697 ~~eL~~~--~~~y~~lv 711 (711)
T TIGR00958 697 HKQLMED--QGCYKHLV 711 (711)
T ss_pred HHHHHhC--CCchHhcC
Confidence 9999986 78999874
No 17
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.3e-84 Score=825.96 Aligned_cols=562 Identities=25% Similarity=0.333 Sum_probs=498.7
Q ss_pred HHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 671 QWRLLKI-NMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYS 749 (1255)
Q Consensus 671 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 749 (1255)
+++++++ .++.++.+...++++++..++....|+.++.+++....... ......+.+.++++.++..++.+++.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 199 (686)
T TIGR03797 123 LRDLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD---RSLLVQIALALLAAAVGAAAFQLAQSLA 199 (686)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444 34556666777777778788888888888988887653211 1222334455566667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 750 FSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWR 829 (1255)
Q Consensus 750 ~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~ 829 (1255)
..+.+.++..++|.++|++++++|++||+ ++++|++++|+. |++.+++.+...+...+..++.++++++++++++|.
T Consensus 200 ~~~~~~~~~~~l~~~~~~~ll~~~~~~~~--~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (686)
T TIGR03797 200 VLRLETRMDASLQAAVWDRLLRLPVSFFR--QYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWK 276 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHC--CCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998 788999999997 799999998887777777777778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHH
Q 000846 830 LTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSW 909 (1255)
Q Consensus 830 l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (1255)
+++++++++|+.+...+...+..++..++..+...+..+.+.|++.|+++||+++.|+++.++|.+..++..+...+..+
T Consensus 277 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 356 (686)
T TIGR03797 277 LALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQR 356 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888877777666666777777777888889999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccC
Q 000846 910 YSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRS 989 (1255)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 989 (1255)
.......+..++..+..++++|+|++++..|.+|+|+++++.++...+..++..+...+.+++.+..+.+|+.++++.++
T Consensus 357 ~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 436 (686)
T TIGR03797 357 IENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALP 436 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEE
Q 000846 990 EIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVF 1069 (1255)
Q Consensus 990 ~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1069 (1255)
+.+... ..+.+..|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 437 e~~~~~----~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 511 (686)
T TIGR03797 437 EVDEAK----TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVF 511 (686)
T ss_pred ccccCc----CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEE
Confidence 533211 1111245789999999999743 45799999999999999999999999999999999999999999999
Q ss_pred ECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCC
Q 000846 1070 MDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLS 1149 (1255)
Q Consensus 1070 idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1149 (1255)
+||+|+++++.+++|++|+||||||.+|+|||||||++++| ++++++++|++.+++++++.++|+||||.+||+|.+||
T Consensus 512 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LS 590 (686)
T TIGR03797 512 YDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLS 590 (686)
T ss_pred ECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCC
Confidence 99999999999999999999999999999999999999998 89999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCH
Q 000846 1150 GGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSH 1229 (1255)
Q Consensus 1150 gGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~ 1229 (1255)
|||||||+||||++++|+|||||||||+||++||+.|++.|++. ++|+|+||||++++++||+|+||++|+|+|.|+|
T Consensus 591 GGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~ 668 (686)
T TIGR03797 591 GGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTY 668 (686)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999999986 6899999999999999999999999999999999
Q ss_pred HHHHhhhcCchhHHHHhhh
Q 000846 1230 NELVALSRGGAYYSLIKPQ 1248 (1255)
Q Consensus 1230 ~eLl~~~~~g~y~~l~~~~ 1248 (1255)
+||+++ +|.|++|++.|
T Consensus 669 ~~Ll~~--~~~y~~l~~~q 685 (686)
T TIGR03797 669 DELMAR--EGLFAQLARRQ 685 (686)
T ss_pred HHHHhC--CcHHHHHHHhc
Confidence 999985 89999999865
No 18
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.1e-84 Score=810.68 Aligned_cols=566 Identities=19% Similarity=0.239 Sum_probs=479.5
Q ss_pred hHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 4 NDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGL 83 (1255)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1255)
++++++|.+++++ .++++++++++.++..+..+++++.++|.+..... .. ..+..+...++++.++..++.+++.+
T Consensus 10 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (588)
T PRK11174 10 TRWLKQQSKPAKR-WLNLSILLGFLSGLLLIAQAWLLATILQALIIENI-PR--EALLPPFILLILLFVLRALLAWLRER 85 (588)
T ss_pred hHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ch--hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4668888876654 45667777777777777788999999997532111 11 22333344445555667788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 84 CWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFI 163 (1255)
Q Consensus 84 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1255)
+..+.+.++..++|.++|++++++|+++|++ .++|++++|+++|++.+++.+...+..++..++.+++.++++++
T Consensus 86 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~-----~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 160 (588)
T PRK11174 86 VGFKAGQHIRQQIRQQVLDKLQQLGPAWIQG-----KPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFP 160 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhhcc-----CCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996 78889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Q 000846 164 LSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGI 243 (1255)
Q Consensus 164 ~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~ 243 (1255)
++|++++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...
T Consensus 161 ~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 240 (588)
T PRK11174 161 INWAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTM 240 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888889999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 244 KQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSI---------FVAGVSIIMGGLSVLGALPNLTAITEAKV 313 (1255)
Q Consensus 244 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (1255)
+..+..+...++. .+..+..+++.+++++.+ .|.++.|.+ +++..+......|+..+...+..+++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~ 319 (588)
T PRK11174 241 EVLRMAFLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVG 319 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766655554443 222233333334454443 377777753 12223334456788888888899999999
Q ss_pred HHHHHHHHhcCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHH
Q 000846 314 AATRIFEMVDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALL 393 (1255)
Q Consensus 314 a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l 393 (1255)
+.+|+.++++.+++.+... ....+.+..+.|+|+||+|.|++ ++++|+|+||+++|||++|||||||||||||+++|
T Consensus 320 ~~~ri~~~l~~~~~~~~~~-~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL 396 (588)
T PRK11174 320 AAESLVTFLETPLAHPQQG-EKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNAL 396 (588)
T ss_pred HHHHHHHHHcCCCcccCCC-ccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 9999999998765322111 10111122457999999987763 35699999999999999999999999999999999
Q ss_pred hcccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcc
Q 000846 394 QRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGY 473 (1255)
Q Consensus 394 ~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~ 473 (1255)
+|+| |++|+|.+||+|+++++.+++|++|+||||+|+||++||+|||++|++++++++++++|+.+++++++.++|+|+
T Consensus 397 ~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~ 475 (588)
T PRK11174 397 LGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGL 475 (588)
T ss_pred hcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccc
Confidence 9999 999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred cchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEE
Q 000846 474 ETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMV 553 (1255)
Q Consensus 474 ~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~v 553 (1255)
||.+||+|.+|||||||||+||||+++||+|||||||||+||+++++.+++.|+++.+++|+|+||||+++++.||+|++
T Consensus 476 dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iiv 555 (588)
T PRK11174 476 DTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWV 555 (588)
T ss_pred ccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999889999999999999999999999
Q ss_pred EeCCEEEEecChhHHhccCCCChhHHHHHHHh
Q 000846 554 LKAGKVVESGSHNELMNRGEGGEYYQMVELQQ 585 (1255)
Q Consensus 554 l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 585 (1255)
|++|+++++|+|+||+++ ++.|+++++.|.
T Consensus 556 l~~G~i~e~G~~~eL~~~--~~~y~~l~~~q~ 585 (588)
T PRK11174 556 MQDGQIVQQGDYAELSQA--GGLFATLLAHRQ 585 (588)
T ss_pred EeCCeEeecCCHHHHHhc--chHHHHHHHHhh
Confidence 999999999999999984 689999987765
No 19
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.8e-84 Score=863.42 Aligned_cols=569 Identities=29% Similarity=0.441 Sum_probs=485.9
Q ss_pred HHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 5 DGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLC 84 (1255)
Q Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1255)
.+++++..++.+ .++++++++++.++..|+++++++.+++.+.... ... .....+++++++++++.+++.+++.++
T Consensus 814 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~-~~~~~~~l~~~~~~i~~~~~~~l~~~~ 889 (1466)
T PTZ00265 814 RIVYREIFSYKK-DVTIIALSILVAGGLYPVFALLYAKYVSTLFDFA--NLE-ANSNKYSLYILVIAIAMFISETLKNYY 889 (1466)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555544333 3677888888999999999999999999764211 111 224456677777788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 85 WTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFIL 164 (1255)
Q Consensus 85 ~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1255)
..+.++++..++|.++|++++++|++|||+. ++++|++++|+++|++.+++++...+..++..++.+++++++++++
T Consensus 890 ~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~---~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~ 966 (1466)
T PTZ00265 890 NNVIGEKVEKTMKRRLFENILYQEISFFDQD---KHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYF 966 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999852 3778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHHHHHHHhhHHHHHHhcchHH
Q 000846 165 SWRLSLAALPLTLMFIVPGLLFGKLMMGVI-MK-----------------MIESYGVAGGIAEQAVSSIRTVYSYVAEHE 226 (1255)
Q Consensus 165 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~ 226 (1255)
+|.++++++++.+++ ...+.++.+... .+ ..+..++.+..++|.++|+++||+|+.|+.
T Consensus 967 ~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~ 1043 (1466)
T PTZ00265 967 CPIVAAVLTGTYFIF---MRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDY 1043 (1466)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHH
Confidence 999988766544433 333333322211 11 123356778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 227 TLIRFSNALQKTMELGIKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNL 305 (1255)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 305 (1255)
+.++|.+..+...+...+.....++..++. .+.++..++++|+|++++..|.+++|.+++++++++....++..+...+
T Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~ 1123 (1466)
T PTZ00265 1044 FCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLK 1123 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998888888888888777766 5556667888999999999999999999988766665556677788888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCccccc---CCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCC
Q 000846 306 TAITEAKVAATRIFEMVDRTPAIDTDDKMGKA---LSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGS 382 (1255)
Q Consensus 306 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~s 382 (1255)
..+++++.+++|++++++.+++.+..+..+.. ++...|.|+|+||+|+||++++.++|+|+||+|+||+++||||||
T Consensus 1124 ~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~S 1203 (1466)
T PTZ00265 1124 GDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGET 1203 (1466)
T ss_pred HHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCC
Confidence 99999999999999999876543211111111 123457899999999998766668999999999999999999999
Q ss_pred CCcHHHHHHHHhcccCC------------------------------------------------------CccEEEECC
Q 000846 383 GSGKSTTIALLQRFYDP------------------------------------------------------VEGEVLLDG 408 (1255)
Q Consensus 383 GsGKSTl~~~l~g~~~~------------------------------------------------------~~G~i~~~g 408 (1255)
|||||||+++|+|+|+| ++|+|++||
T Consensus 1204 GsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG 1283 (1466)
T PTZ00265 1204 GSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDG 1283 (1466)
T ss_pred CCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECC
Confidence 99999999999999999 699999999
Q ss_pred eecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHH
Q 000846 409 YKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQ 488 (1255)
Q Consensus 409 ~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 488 (1255)
+|+++++.+++|++||||+|||.||++||+|||.||.++++++++++||+.+++++||.+||+||||.|||+|.+|||||
T Consensus 1284 ~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQ 1363 (1466)
T PTZ00265 1284 VDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQ 1363 (1466)
T ss_pred EEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhhcCEEEEEeC----CEEE-E
Q 000846 489 KQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRTANLIMVLKA----GKVV-E 561 (1255)
Q Consensus 489 rqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~~d~i~vl~~----G~i~-~ 561 (1255)
||||||||||+++|+|||||||||+||+++++.|+++|+++. +++|+|+||||+++++.||+|+||++ |+++ |
T Consensus 1364 kQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e 1443 (1466)
T PTZ00265 1364 KQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQA 1443 (1466)
T ss_pred HHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEE
Confidence 999999999999999999999999999999999999999884 69999999999999999999999999 9954 8
Q ss_pred ecChhHHhccCCCChhHHHHHHH
Q 000846 562 SGSHNELMNRGEGGEYYQMVELQ 584 (1255)
Q Consensus 562 ~g~~~~l~~~~~~~~~~~~~~~~ 584 (1255)
+|+|+||+++ .++.|+++++.|
T Consensus 1444 ~Gth~eLl~~-~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1444 HGTHEELLSV-QDGVYKKYVKLA 1465 (1466)
T ss_pred ecCHHHHHhc-CCChHHHHHhhc
Confidence 9999999973 268999998754
No 20
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.2e-84 Score=824.24 Aligned_cols=564 Identities=24% Similarity=0.336 Sum_probs=500.8
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 671 QWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSF 750 (1255)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 750 (1255)
+++++++.++.++.+...++++++..++....|++++.+++....... ......+.+.++++.++..++.+++.++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 144 LLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM---MGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666777777777777888888888889999999987654321 11222334444555667778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 751 SVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRL 830 (1255)
Q Consensus 751 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l 830 (1255)
.+.+.++..++|.++|+++++.|++||+ ++++|++++|++ |.+.+.+.+...+...+..++.+++.++++++++|.+
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~--~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 297 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFS--TRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL 297 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999999999999998 788999999997 8999998888777777777777788888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHH
Q 000846 831 TLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWY 910 (1255)
Q Consensus 831 ~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1255)
++++++++|+.++..+...+..++..++..+...+..+.+.|+++|+++||+++.|+++.++|.+...+..+...+..+.
T Consensus 298 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 377 (708)
T TIGR01193 298 FLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKA 377 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988877777777777777888888888999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCC
Q 000846 911 SGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSE 990 (1255)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 990 (1255)
......+..++..+..++++|+|++++..|.+|+|.++++.++...+..++..+...+..++.+..+.+|+.++++.+++
T Consensus 378 ~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 457 (708)
T TIGR01193 378 DQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSE 457 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 88888888888888889999999999999999999999999999999999999999999999999999999999987665
Q ss_pred CCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEE
Q 000846 991 IDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFM 1070 (1255)
Q Consensus 991 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~i 1070 (1255)
.+..... ...++..|.|+|+||+|+|+. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++
T Consensus 458 ~~~~~~~--~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~i 533 (708)
T TIGR01193 458 FINKKKR--TELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILL 533 (708)
T ss_pred ccccccc--cCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEE
Confidence 4322110 111234578999999999973 357999999999999999999999999999999999999999999999
Q ss_pred CCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcC-CCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCC
Q 000846 1071 DEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYG-KADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLS 1149 (1255)
Q Consensus 1071 dG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g-~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1149 (1255)
||+|+++++.+++|++|+||||||+||+|||||||.++ +|+++++++++|++.++++++|.++|+||||.+||+|.+||
T Consensus 534 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LS 613 (708)
T TIGR01193 534 NGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSIS 613 (708)
T ss_pred CCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCC
Confidence 99999999999999999999999999999999999998 57899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCH
Q 000846 1150 GGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSH 1229 (1255)
Q Consensus 1150 gGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~ 1229 (1255)
|||||||+||||++++|+|||||||||+||++||+.|++.|++. +++|+|+||||+++++.||+|+||++|+++|.|+|
T Consensus 614 gGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~ 692 (708)
T TIGR01193 614 GGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSH 692 (708)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999999985 78999999999999999999999999999999999
Q ss_pred HHHHhhhcCchhHHHHhh
Q 000846 1230 NELVALSRGGAYYSLIKP 1247 (1255)
Q Consensus 1230 ~eLl~~~~~g~y~~l~~~ 1247 (1255)
+||+++ +|.|++|+++
T Consensus 693 ~~L~~~--~~~y~~l~~~ 708 (708)
T TIGR01193 693 DELLDR--NGFYASLIHN 708 (708)
T ss_pred HHHHhc--CCcHHHHhhC
Confidence 999985 8999999863
No 21
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.4e-84 Score=740.51 Aligned_cols=552 Identities=27% Similarity=0.364 Sum_probs=497.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 688 GCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLG 767 (1255)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~ 767 (1255)
..+++++.++.....+++++..++.++.... ......+...++++.++..+..+.+.....+++.++...+|+++++
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~---~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~ 81 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQL---FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLD 81 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666667777778877776664321 2233445556677778888889999999999999999999999999
Q ss_pred HHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 768 KLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYS 847 (1255)
Q Consensus 768 ~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~ 847 (1255)
++.+.++.|-+ ..|+|++.+.+...++.++.++...++.+..+.+..+..++.+++++|.-++++++++|++.++++.
T Consensus 82 ~l~~~gp~~~~--~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMil 159 (559)
T COG4988 82 KLAKLGPAFIA--QKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMIL 159 (559)
T ss_pred HHHhCChhhhc--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 6789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 848 RNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTA 927 (1255)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (1255)
.....++..++........+.++.+.++|+.|+|+|++.+...++..+...+.++.+++..+......++..++.+++.+
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiA 239 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIA 239 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCcccccccc
Q 000846 928 LAYWYGGRLLTQ-ELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMR 1006 (1255)
Q Consensus 928 ~~~~~g~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1255)
++..|.+..... |.++....+.++...--+..|+-.+.+.+++-..+..+.+.++.+++.+++..+.... ....+..+
T Consensus 240 lvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~-~~~~~~~~ 318 (559)
T COG4988 240 LVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEK-AEVANEPP 318 (559)
T ss_pred HHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccc-cccccCCC
Confidence 877776666666 8999888777777777788899999999999999999999999999887654332211 11222233
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcc
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSH 1086 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1086 (1255)
.+|+++|++|+||.. +++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|.++++.+.||++
T Consensus 319 ~ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 319 IEISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred ceeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhH
Confidence 456677999999854 379999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 000846 1087 IALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNP 1166 (1255)
Q Consensus 1087 i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p 1166 (1255)
+++|||+|+||+|||||||++++|+++||+++++++.+++.+|+.. |+|+||.+||+|.+|||||+||+++|||+++++
T Consensus 397 i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~ 475 (559)
T COG4988 397 ISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPA 475 (559)
T ss_pred eeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHh
Q 000846 1167 SILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIK 1246 (1255)
Q Consensus 1167 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~ 1246 (1255)
+++|||||||+||.+||+.|++.|.+.++++|+|+||||++.+.+||+|+|||+|+++|.|+|++|.++ +|.|++|++
T Consensus 476 ~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~--~~~y~~l~~ 553 (559)
T COG4988 476 SLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK--QGLYANLLK 553 (559)
T ss_pred CEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc--CcHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999985 899999999
Q ss_pred hhcC
Q 000846 1247 PQGG 1250 (1255)
Q Consensus 1247 ~~~~ 1250 (1255)
+|.+
T Consensus 554 ~q~~ 557 (559)
T COG4988 554 QQEG 557 (559)
T ss_pred HHhc
Confidence 8865
No 22
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.4e-83 Score=797.41 Aligned_cols=566 Identities=23% Similarity=0.329 Sum_probs=490.1
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChh-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 672 WRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKS-EIKSKSRTLSLFFLGVAVLNFISSLLQHYSF 750 (1255)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 750 (1255)
++++++.++.++.+.++++++++..++....+++++.+++........ ............+++++++..++.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (574)
T PRK11160 5 LPFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVS 84 (574)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566677777788888888888888888888888888865321110 0000011112234445667778888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 751 SVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRL 830 (1255)
Q Consensus 751 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l 830 (1255)
.+.+.++..++|.++|++++++|++||+ ++++|++++|+++|++.++..+...+..++..++.+++.++++++++|.+
T Consensus 85 ~~~~~~~~~~lR~~l~~~l~~~~~~~~~--~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 162 (574)
T PRK11160 85 HDATFRVLTHLRVFTFSKLLPLSPAGLA--RYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTL 162 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhhccChHhhc--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 67899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHH
Q 000846 831 TLVMIAVQPLVIG-SYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSW 909 (1255)
Q Consensus 831 ~l~~l~~~pl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (1255)
++++++++|++++ ..+...+..+...++.++...+....+.|.++|+++||+|+.++++.++|.+..++..+...+..+
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 242 (574)
T PRK11160 163 ALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQAN 242 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998877776544 334444555566677777888889999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Q 000846 910 YSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLF-TAYVIAEAGSMTSDISKGSNAVRSVFAILDRR 988 (1255)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~ 988 (1255)
.......+..++..+..++++++|+++ ..|.++.|.+++++.+... ...++..+......+.++..+.+|+.++++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~ 321 (574)
T PRK11160 243 LTGLSQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQK 321 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 888888888888888888889999988 4788999998877665533 34567778888899999999999999999876
Q ss_pred CCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceE
Q 000846 989 SEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSV 1068 (1255)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I 1068 (1255)
++.+...... ..+..+.|+|+||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|
T Consensus 322 ~~~~~~~~~~---~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I 397 (574)
T PRK11160 322 PEVTFPTTST---AAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEI 397 (574)
T ss_pred CCCCCCcccC---CCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 6532211111 11234679999999999753 3479999999999999999999999999999999999999999999
Q ss_pred EECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCC
Q 000846 1069 FMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQL 1148 (1255)
Q Consensus 1069 ~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~L 1148 (1255)
++||+|+++++.+++|++|+||||||++|++||+|||++++|+++|+++++|++.+++++|+.+ |+||||.+||+|.+|
T Consensus 398 ~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~L 476 (574)
T PRK11160 398 LLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQL 476 (574)
T ss_pred EECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000846 1149 SGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGS 1228 (1255)
Q Consensus 1149 SgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~ 1228 (1255)
|||||||||||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++.+||+|++|++|+++|.|+
T Consensus 477 SgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~ 556 (574)
T PRK11160 477 SGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGT 556 (574)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCC
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHHhhhcCchhHHHHhh
Q 000846 1229 HNELVALSRGGAYYSLIKP 1247 (1255)
Q Consensus 1229 ~~eLl~~~~~g~y~~l~~~ 1247 (1255)
|+||+++ +|.|++||+.
T Consensus 557 ~~~l~~~--~g~y~~l~~~ 573 (574)
T PRK11160 557 HQELLAQ--QGRYYQLKQR 573 (574)
T ss_pred HHHHHhc--CcHHHHHHhh
Confidence 9999986 8999999863
No 23
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=7.5e-84 Score=823.03 Aligned_cols=564 Identities=24% Similarity=0.336 Sum_probs=498.7
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 671 QWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSF 750 (1255)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 750 (1255)
++.++++.++.+..+...++++++..++....|++.+.+++....... ......+.+.++++.++..++.+++.++.
T Consensus 142 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (710)
T TIGR03796 142 LRALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR---QDWLRPLLLGMGLTALLQGVLTWLQLYYL 218 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555666666677777777777777788888888886653221 11122334445556677788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 751 SVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRL 830 (1255)
Q Consensus 751 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l 830 (1255)
...+.++..+++.++|+++++.|++||+ ++++|++++|+.+| +.+++.+...+..++..++.+++.++++++++|.+
T Consensus 219 ~~~~~~~~~~l~~~~~~~ll~l~~~~~~--~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 295 (710)
T TIGR03796 219 RRLQIKLAVGMSARFLWHILRLPVRFFA--QRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVL 295 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 78899999999988 67998888888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHH
Q 000846 831 TLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWY 910 (1255)
Q Consensus 831 ~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1255)
++++++.+|+.++..+...+..+...++..+...+..+.+.|++.|+++||+++.|+.+.++|.+...+..+...+..+.
T Consensus 296 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 375 (710)
T TIGR03796 296 TLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVL 375 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888777776666666666777777788889999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCC
Q 000846 911 SGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSE 990 (1255)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 990 (1255)
......+..++..+..++++++|++++..|.+|+|.++++.++...+..++..+...+..+..+..+.+|+.++++.+++
T Consensus 376 ~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e 455 (710)
T TIGR03796 376 TQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVD 455 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 88888888888889999999999999999999999999999999999999999999999999999999999999987665
Q ss_pred CCCCCC---CCcccc-ccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCc
Q 000846 991 IDPDSP---QGRDIK-RQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKG 1066 (1255)
Q Consensus 991 ~~~~~~---~~~~~~-~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G 1066 (1255)
.+.... .....+ ++..|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 534 (710)
T TIGR03796 456 PLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSG 534 (710)
T ss_pred cccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 432210 000111 2245789999999999853 45799999999999999999999999999999999999999999
Q ss_pred eEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCC
Q 000846 1067 SVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGV 1146 (1255)
Q Consensus 1067 ~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~ 1146 (1255)
+|++||+|+++++.+++|++|+||||||.+|+|||||||++++|+++++++++|++.+++++++.++|+||||.+||+|.
T Consensus 535 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~ 614 (710)
T TIGR03796 535 EILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGA 614 (710)
T ss_pred EEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000846 1147 QLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQ 1226 (1255)
Q Consensus 1147 ~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~ 1226 (1255)
+||||||||||||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++.+||||+||++|+|+|.
T Consensus 615 ~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~ 692 (710)
T TIGR03796 615 NLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQR 692 (710)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEe
Confidence 9999999999999999999999999999999999999999999987 58999999999999999999999999999999
Q ss_pred cCHHHHHhhhcCchhHHHH
Q 000846 1227 GSHNELVALSRGGAYYSLI 1245 (1255)
Q Consensus 1227 G~~~eLl~~~~~g~y~~l~ 1245 (1255)
|+|+||++. +|.|++|+
T Consensus 693 G~~~~Ll~~--~~~y~~l~ 709 (710)
T TIGR03796 693 GTHEELWAV--GGAYARLI 709 (710)
T ss_pred cCHHHHHHc--CCcHHHHh
Confidence 999999985 89999997
No 24
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=4.9e-83 Score=809.76 Aligned_cols=561 Identities=35% Similarity=0.508 Sum_probs=490.1
Q ss_pred hHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 4 NDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGL 83 (1255)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1255)
+++++++.++. +..+++.+++.++..+.....|++.+.++|.+....+ . +........++++.++..++.+++.+
T Consensus 149 ~~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (711)
T TIGR00958 149 LFRLLGLSGRD-WPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKG--P--PALASAIFFMCLLSIASSVSAGLRGG 223 (711)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--H--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45777777543 4445566666666666666777899999997653211 1 22222333344455666778888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 84 CWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFI 163 (1255)
Q Consensus 84 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1255)
++.+.+.++..++|.++|++++++|++||++ .++|++++|+++|++.+++.+...+..++.+++.+++.++++++
T Consensus 224 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~-----~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~ 298 (711)
T TIGR00958 224 SFNYTMARINLRIREDLFRSLLRQDLGFFDE-----NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLW 298 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC-----CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996 67789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Q 000846 164 LSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGI 243 (1255)
Q Consensus 164 ~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~ 243 (1255)
++|++++++++.+|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...
T Consensus 299 ~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 378 (711)
T TIGR00958 299 LSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNK 378 (711)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998899999999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000846 244 KQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMV 322 (1255)
Q Consensus 244 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 322 (1255)
+.....+...... .+..+..++++++|++++.+|.+++|.++++..+......|+..+...+..+++++.+.+|+++++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l 458 (711)
T TIGR00958 379 RKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYL 458 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7766655544433 333445566778899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCcc
Q 000846 323 DRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEG 402 (1255)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 402 (1255)
+.+++.+... ...+++..+.|+|+||+|+||+++++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|
T Consensus 459 ~~~~~~~~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G 536 (711)
T TIGR00958 459 DRKPNIPLTG--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGG 536 (711)
T ss_pred CCCCCCCCCC--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCC
Confidence 8765533211 11222345789999999999865556899999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCC
Q 000846 403 EVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGF 482 (1255)
Q Consensus 403 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 482 (1255)
+|.+||+|+++++.+++|++|+||||||++|++||+|||.+|.++.++++++++++.++++++++++|+|+||.+||+|.
T Consensus 537 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~ 616 (711)
T TIGR00958 537 QVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGS 616 (711)
T ss_pred EEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 000846 483 QMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVES 562 (1255)
Q Consensus 483 ~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~ 562 (1255)
+||||||||++||||++++|+|||||||||+||+++++.+++ ....+++|+|+||||+++++.||+|++|++|+|+|+
T Consensus 617 ~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~ 694 (711)
T TIGR00958 617 QLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEM 694 (711)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999998 333578999999999999999999999999999999
Q ss_pred cChhHHhccCCCChhHHH
Q 000846 563 GSHNELMNRGEGGEYYQM 580 (1255)
Q Consensus 563 g~~~~l~~~~~~~~~~~~ 580 (1255)
|+|+||+++ ++.|+++
T Consensus 695 Gt~~eL~~~--~~~y~~l 710 (711)
T TIGR00958 695 GTHKQLMED--QGCYKHL 710 (711)
T ss_pred eCHHHHHhC--CCchHhc
Confidence 999999984 5677765
No 25
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-86 Score=725.78 Aligned_cols=503 Identities=30% Similarity=0.422 Sum_probs=427.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 739 NFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVF 818 (1255)
Q Consensus 739 ~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~ 818 (1255)
+.++.-++.+++..+.+...+++--++|+|+..+++.|+- .+.+|+++.-+.+..+.+. ++...+.++...+.-+.+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL--~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~v 348 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHL--NRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGV 348 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeee--cccccceeehhccCcchhh-HHHHHHhhcccHHHHhhh
Confidence 4566777888888899999999999999999999999997 5679999988888877776 666666666655555555
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHH
Q 000846 819 SYIVGL-VLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETL 897 (1255)
Q Consensus 819 ~~~~~~-~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~ 897 (1255)
+++..+ ..+|+..++++.+..+.+........-..+.+++......+......+++-|.+|+|-|+.|++..++|.+..
T Consensus 349 a~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAi 428 (790)
T KOG0056|consen 349 AMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAI 428 (790)
T ss_pred hhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHH
Confidence 444333 3577777776655544433222111112222334444455666677899999999999999999999999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 898 RGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNA 977 (1255)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 977 (1255)
..+.+...+...-..+.......+..+.......++++++..+..++|+++.+..+++..-+|+..++.....+++...-
T Consensus 429 l~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiD 508 (790)
T KOG0056|consen 429 LKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFID 508 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhh
Confidence 99988777765544444444445555555555566677788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHH
Q 000846 978 VRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLL 1057 (1255)
Q Consensus 978 ~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL 1057 (1255)
.+++++++++++|..+. |..+|. ...+|.|+|+||+|.|. |++|||+||||+++||+++|+|||||+||||++++|
T Consensus 509 mEnmfdllkee~eVvd~-P~a~pl-~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlL 584 (790)
T KOG0056|consen 509 MENMFDLLKEEPEVVDL-PGAPPL-KVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLL 584 (790)
T ss_pred HHHHHHHhhcCchhhcC-CCCCCc-cccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHH
Confidence 99999999988775432 222222 23579999999999995 567899999999999999999999999999999999
Q ss_pred hcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHcccccc
Q 000846 1058 ERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGY 1137 (1255)
Q Consensus 1058 ~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gl 1137 (1255)
+||||.++|.|.|||+||+++..++||++||+||||.+||++||..||.|++|.+++||+.+|++.|++||-|.++|+||
T Consensus 585 fRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY 664 (790)
T KOG0056|consen 585 FRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGY 664 (790)
T ss_pred HHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEE
Q 000846 1138 DTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAV 1217 (1255)
Q Consensus 1138 dt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~V 1217 (1255)
+|.|||+|-.||||||||+||||++|++|.|++|||||||||..||+.||.++.+.++++|.|+|||||+|+.+||.|+|
T Consensus 665 ~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILv 744 (790)
T KOG0056|consen 665 NTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILV 744 (790)
T ss_pred hhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCEEEEecCHHHHHhhhcCchhHHHHhhhc
Q 000846 1218 IKNGRVVEQGSHNELVALSRGGAYYSLIKPQG 1249 (1255)
Q Consensus 1218 l~~G~ive~G~~~eLl~~~~~g~y~~l~~~~~ 1249 (1255)
+++|+|+|.|+|+||+++ .+|.|++||+.|+
T Consensus 745 i~~G~IvErG~HeeLl~r-dgG~Ya~MWq~qq 775 (790)
T KOG0056|consen 745 ISNGRIVERGRHEELLKR-DGGAYADMWQAQQ 775 (790)
T ss_pred EeCCeEeecCcHHHHHhc-cCCcHHHHHHHHH
Confidence 999999999999999986 6999999997553
No 26
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=9.6e-83 Score=792.30 Aligned_cols=562 Identities=33% Similarity=0.538 Sum_probs=497.5
Q ss_pred chHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 3 GNDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEG 82 (1255)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (1255)
.+++++++.. ++ .+.+++++.++..+.....+++++.++|.+... . .....+...++++.++..++.++..
T Consensus 3 ~~~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~--~~~~~~~~~~~~~~~~~~v~~~~~~ 73 (567)
T COG1132 3 LLRRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD----L--GELLELLLLLLLLALLGGVLRALQS 73 (567)
T ss_pred hHHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----H--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666665 44 555666666666666666668888888876510 1 2333444445555566777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 83 LCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSF 162 (1255)
Q Consensus 83 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (1255)
++..+.+.+...++|.+++++++++|+++|++ +++|++++|+++|++.++..+.+....+...+..+++.+++++
T Consensus 74 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~-----~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (567)
T COG1132 74 YLGSRLGQKIVADLRRDLFEKLLRLPLSFFDK-----AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLF 148 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHhCc-----CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999997 5677999999999999999999886666667888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 000846 163 ILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELG 242 (1255)
Q Consensus 163 ~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~ 242 (1255)
..+|.++++++...|++.++..++.++.++...+.++..++.++.+.|.++|+++||+|+.++.+.+++.+..++..+..
T Consensus 149 ~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~ 228 (567)
T COG1132 149 SLSWRLALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRAN 228 (567)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888888778899999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 243 IKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEM 321 (1255)
Q Consensus 243 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~ 321 (1255)
.+.....+...+.. .+..+....++++|++++..+.++.|.+.+++.+......|+..+...+..++.+..+++|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~ 308 (567)
T COG1132 229 LRASRLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFEL 308 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777777776555 55567778888999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCc
Q 000846 322 VDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVE 401 (1255)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~ 401 (1255)
++.+++...... ......++|+|+||+|+|++ ++++|+|+||+++|||++||||||||||||++++|.|+|+|++
T Consensus 309 l~~~~~~~~~~~---~~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~ 383 (567)
T COG1132 309 LDEEPEVEDPPD---PLKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTS 383 (567)
T ss_pred HcCCccccCCCC---CCCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCC
Confidence 998665332211 12334578999999999974 3579999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCC
Q 000846 402 GEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLG 481 (1255)
Q Consensus 402 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g 481 (1255)
|+|++||+|+++++..++|++|++|||||+||++||+|||.+|+++++++++++||+.++++|++.++|+||||.+||+|
T Consensus 384 G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G 463 (567)
T COG1132 384 GEILIDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERG 463 (567)
T ss_pred CeEEECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEE
Q 000846 482 FQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVE 561 (1255)
Q Consensus 482 ~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~ 561 (1255)
.+||||||||+|||||+++||+|||||||||+||+++|+.++++++++.++||+|+||||++++++||+|+||++|+|+|
T Consensus 464 ~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e 543 (567)
T COG1132 464 VNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVE 543 (567)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred ecChhHHhccCCCChhHHHHHHHh
Q 000846 562 SGSHNELMNRGEGGEYYQMVELQQ 585 (1255)
Q Consensus 562 ~g~~~~l~~~~~~~~~~~~~~~~~ 585 (1255)
.|+|+||+++ +|.|+++++.|.
T Consensus 544 ~G~h~eLl~~--~g~y~~l~~~~~ 565 (567)
T COG1132 544 RGTHEELLAK--GGLYARLYQAQG 565 (567)
T ss_pred ecCHHHHHHc--CCHHHHHHHHhh
Confidence 9999999985 799999998764
No 27
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=8e-83 Score=810.68 Aligned_cols=557 Identities=27% Similarity=0.389 Sum_probs=493.9
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 673 RLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSV 752 (1255)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 752 (1255)
+++++.++.+..+...++++++..++....|++++.+++....... ......+.+.++++.++..++.+++.++..+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA---FETLWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc---HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555667777777777778788888888888988886653211 1112223334445566677888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 753 MGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTL 832 (1255)
Q Consensus 753 ~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l 832 (1255)
.+.++..++|.++|+|++++|++| + ++++|++++|+ +|++.+++.+...+...+..++.+++.++++++++|.+++
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 289 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVW 289 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999998 4 57899999999 8999999999888877777777788888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHH
Q 000846 833 VMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSG 912 (1255)
Q Consensus 833 ~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1255)
+.++.+|+.++..+...+..++..++..+...+..+.+.|++.|+++||+|+.|+.+.++|.+..++..+...+..+...
T Consensus 290 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (694)
T TIGR03375 290 VPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSN 369 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998887777777777777788888888999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q 000846 913 IGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEID 992 (1255)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 992 (1255)
....+..++..+..++++++|++++..|.+|+|+++++..+...+..++..+...+.++..+..+.+|+.++++.+++.+
T Consensus 370 ~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~ 449 (694)
T TIGR03375 370 LATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERP 449 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 88888888888999999999999999999999999999999999999999999999999999999999999998876533
Q ss_pred CCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECC
Q 000846 993 PDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDE 1072 (1255)
Q Consensus 993 ~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG 1072 (1255)
..... ....+..|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 450 ~~~~~--~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg 526 (694)
T TIGR03375 450 EGTRF--LHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDG 526 (694)
T ss_pred CCCCC--CCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 21110 1111245789999999999743 45799999999999999999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHH
Q 000846 1073 QDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1073 ~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1152 (1255)
+|+++++++++|++|+||||||++|+|||||||++++|+++++++++|++.+++++++.++|+||||.+||+|.+|||||
T Consensus 527 ~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQ 606 (694)
T TIGR03375 527 VDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQ 606 (694)
T ss_pred EEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHH
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
|||||||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||++|+++|.|+|+||
T Consensus 607 rQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eL 686 (694)
T TIGR03375 607 RQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQV 686 (694)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred HhhhcCc
Q 000846 1233 VALSRGG 1239 (1255)
Q Consensus 1233 l~~~~~g 1239 (1255)
++..+.|
T Consensus 687 l~~~~~~ 693 (694)
T TIGR03375 687 LEALRKG 693 (694)
T ss_pred HHHhhcC
Confidence 9864444
No 28
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.9e-82 Score=794.36 Aligned_cols=567 Identities=32% Similarity=0.492 Sum_probs=497.6
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 672 WRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFS 751 (1255)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 751 (1255)
+.++++.++.++.+++.+++.++..+.....+++++.+++........ .....+.+.+++++++..+..++..++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 90 (582)
T PRK11176 14 RRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADR---SVLKWMPLVVIGLMILRGITSFISSYCIS 90 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555566666666666666666666777777777765532111 11122233344566677788888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 752 VMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLT 831 (1255)
Q Consensus 752 ~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~ 831 (1255)
+.+.++...+|.++++++++.|.++|+ +..+|++++|+++|++.+.+.+...+..++..++.+++.++++++++|.++
T Consensus 91 ~~~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 168 (582)
T PRK11176 91 WVSGKVVMTMRRRLFGHMMGMPVSFFD--KQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLS 168 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhC--CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHH
Q 000846 832 LVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYS 911 (1255)
Q Consensus 832 l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1255)
+++++++|+.++..+...+..++..++..+...+....+.|.++|+++||+|+.++.+.++|.+..+...+...+..+..
T Consensus 169 l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (582)
T PRK11176 169 LILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSAS 248 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888877777666666677677777777888899999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCC
Q 000846 912 GIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEI 991 (1255)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 991 (1255)
.....+..++..+...+++++|++++..|.+++|++++++.+......++..+...+..+.++..+.+|+.++++.+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~ 328 (582)
T PRK11176 249 SISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEK 328 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcC
Confidence 88888888888888889999999999999999999999888888889999999999999999999999999999865442
Q ss_pred CCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEEC
Q 000846 992 DPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMD 1071 (1255)
Q Consensus 992 ~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~id 1071 (1255)
+.... . ..+..+.|+|+||+|+||+. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++|
T Consensus 329 ~~~~~---~-~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~ 403 (582)
T PRK11176 329 DEGKR---V-IERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLD 403 (582)
T ss_pred CCCCc---C-CCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEEC
Confidence 21111 1 11234679999999999753 4579999999999999999999999999999999999999999999999
Q ss_pred CeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCC-CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCCh
Q 000846 1072 EQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKAD-ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSG 1150 (1255)
Q Consensus 1072 G~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~-~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSg 1150 (1255)
|+|+++++.+++|++|+||||||++|+|||||||++|+++ .+|++++++++.+++++++.++|+||||.+||+|.+|||
T Consensus 404 g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSG 483 (582)
T PRK11176 404 GHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSG 483 (582)
T ss_pred CEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCH
Confidence 9999999999999999999999999999999999999764 799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHH
Q 000846 1151 GQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHN 1230 (1255)
Q Consensus 1151 GQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~ 1230 (1255)
||||||+|||||+++|+|||||||||+||++||+.|.+.|.+..+++|+|+||||+++++.||+|++|++|+++|.|+|+
T Consensus 484 GqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~ 563 (582)
T PRK11176 484 GQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHA 563 (582)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred HHHhhhcCchhHHHHhhhcC
Q 000846 1231 ELVALSRGGAYYSLIKPQGG 1250 (1255)
Q Consensus 1231 eLl~~~~~g~y~~l~~~~~~ 1250 (1255)
+|+++ ++.|++|++.|.+
T Consensus 564 ~l~~~--~~~y~~l~~~~~~ 581 (582)
T PRK11176 564 ELLAQ--NGVYAQLHKMQFG 581 (582)
T ss_pred HHHhC--CChHHHHHHHHhc
Confidence 99986 7999999987754
No 29
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.9e-82 Score=788.85 Aligned_cols=567 Identities=25% Similarity=0.332 Sum_probs=482.8
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 671 QWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSF 750 (1255)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 750 (1255)
.+++.++..+.++.+++.++++++..++....|++++.+++......... ......+.+.++++.++..++.++..+..
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (592)
T PRK10790 11 LKRLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLP-LGLVAGLAAAYVGLQLLAAGLHYAQSLLF 89 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666777777788888888888888999999988765321111 11111122334445556677788888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 751 SVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRL 830 (1255)
Q Consensus 751 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l 830 (1255)
...+.++..++|.++|+++++.|.+||+ ++++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+
T Consensus 90 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 167 (592)
T PRK10790 90 NRAAVGVVQQLRTDVMDAALRQPLSAFD--TQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRM 167 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 67899999999999999999999999999999988899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHH
Q 000846 831 TLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWY 910 (1255)
Q Consensus 831 ~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1255)
++++++.+|+.++.........+...++..+...+....+.|.+.|+++||+|+.++++.++|.+..++..+...+....
T Consensus 168 ~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (592)
T PRK10790 168 ALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRL 247 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888887666665555556666666677778888999999999999999999999999999888877777666655
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccC
Q 000846 911 SGIG-LFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRS 989 (1255)
Q Consensus 911 ~~~~-~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 989 (1255)
.... ..+..++..+...+++++++. +..|.+++|.++++..+...+..++..+...+..++++..+.+|+.++++.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 326 (592)
T PRK10790 248 DGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPR 326 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5433 333444444333333333333 57899999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEE
Q 000846 990 EIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVF 1069 (1255)
Q Consensus 990 ~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1069 (1255)
+..... . .+...++|+|+||+|+||. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 327 ~~~~~~----~-~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 399 (592)
T PRK10790 327 QQYGND----D-RPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIR 399 (592)
T ss_pred ccCCCC----c-cCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEE
Confidence 321111 1 1123467999999999974 35799999999999999999999999999999999999999999999
Q ss_pred ECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCC
Q 000846 1070 MDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLS 1149 (1255)
Q Consensus 1070 idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1149 (1255)
+||+|+++++.+++|++|+||||||.+|+|||||||++++ +++|++++++++.+++++++.++|+||||.+||+|.+||
T Consensus 400 idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LS 478 (592)
T PRK10790 400 LDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLS 478 (592)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999998 689999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCH
Q 000846 1150 GGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSH 1229 (1255)
Q Consensus 1150 gGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~ 1229 (1255)
|||||||||||||+++|+|||||||||+||++||+.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|
T Consensus 479 GGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~ 558 (592)
T PRK10790 479 VGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTH 558 (592)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred HHHHhhhcCchhHHHHhhhcCC
Q 000846 1230 NELVALSRGGAYYSLIKPQGGS 1251 (1255)
Q Consensus 1230 ~eLl~~~~~g~y~~l~~~~~~~ 1251 (1255)
+||+++ ++.|++|++.|..+
T Consensus 559 ~~L~~~--~~~y~~l~~~~~~~ 578 (592)
T PRK10790 559 QQLLAA--QGRYWQMYQLQLAG 578 (592)
T ss_pred HHHHhC--CCHHHHHHHHHhhh
Confidence 999986 89999999987543
No 30
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1e-81 Score=799.43 Aligned_cols=562 Identities=29% Similarity=0.370 Sum_probs=489.9
Q ss_pred hHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 4 NDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGL 83 (1255)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1255)
+++++++.-+..+..++..++++++..+.....|++++.++|.+..... . ..++.+++.++++.++.+++.+++.+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~--~--~~l~~~~~~~~~~~~~~~~~~~~~~~ 198 (686)
T TIGR03797 123 LRDLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD--R--SLLVQIALALLAAAVGAAAFQLAQSL 198 (686)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--h--hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666322223333444555555555555556788999997653211 1 23344444555566667788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 84 CWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFI 163 (1255)
Q Consensus 84 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1255)
+..+.+.++..++|..+|++++++|+.||++ .++|++++|++ |++.+++.+...+...+.+++.++++++++++
T Consensus 199 ~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~-----~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 272 (686)
T TIGR03797 199 AVLRLETRMDASLQAAVWDRLLRLPVSFFRQ-----YSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFY 272 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHCC-----CChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996 77889999997 89999999999888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Q 000846 164 LSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGI 243 (1255)
Q Consensus 164 ~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~ 243 (1255)
++|++++++++++|+++++..++.+..++..++.++..++..+.+.|.++|+++||+++.|+.+.++|.+..++..+...
T Consensus 273 ~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 352 (686)
T TIGR03797 273 YSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLEL 352 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888889999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000846 244 KQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMV 322 (1255)
Q Consensus 244 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 322 (1255)
+.....++...+. .+..+..++++|+|++++.+|.+|.|.++++..+......|+..+...+..+++++.+.+|+.+++
T Consensus 353 ~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 432 (686)
T TIGR03797 353 SAQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPIL 432 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888777665554 444566677889999999999999999999999989999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCcc
Q 000846 323 DRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEG 402 (1255)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 402 (1255)
+.+++.+... ..+.+..+.|+++||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|
T Consensus 433 ~~~~e~~~~~---~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 508 (686)
T TIGR03797 433 EALPEVDEAK---TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESG 508 (686)
T ss_pred cCCcccccCc---CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC
Confidence 8765432111 1122345689999999999743 35799999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCC
Q 000846 403 EVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGF 482 (1255)
Q Consensus 403 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 482 (1255)
+|++||+|+++++.+++|++||||||||++|++||+|||.++++ .++++++++++.+++++++.++|+|+||.+||+|.
T Consensus 509 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~ 587 (686)
T TIGR03797 509 SVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGG 587 (686)
T ss_pred EEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCC
Confidence 99999999999999999999999999999999999999999988 89999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 000846 483 QMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVES 562 (1255)
Q Consensus 483 ~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~ 562 (1255)
+||||||||++||||++++|+|||||||||+||+++++.+.+.|+++ ++|+|+||||+++++.||+|++|++|+++++
T Consensus 588 ~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~ 665 (686)
T TIGR03797 588 TLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQ 665 (686)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999886 6899999999999999999999999999999
Q ss_pred cChhHHhccCCCChhHHHHHHH
Q 000846 563 GSHNELMNRGEGGEYYQMVELQ 584 (1255)
Q Consensus 563 g~~~~l~~~~~~~~~~~~~~~~ 584 (1255)
|+|+||+++ ++.|+++++.|
T Consensus 666 G~~~~Ll~~--~~~y~~l~~~q 685 (686)
T TIGR03797 666 GTYDELMAR--EGLFAQLARRQ 685 (686)
T ss_pred CCHHHHHhC--CcHHHHHHHhc
Confidence 999999984 68999988643
No 31
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.3e-81 Score=798.76 Aligned_cols=567 Identities=27% Similarity=0.389 Sum_probs=501.6
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 671 QWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSF 750 (1255)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 750 (1255)
+++++++.++.+..+...++++++..++....|+++..+++....... ......+.+.++++.++..++.+++.+..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~---~~~l~~l~~~~~~~~~~~~~~~~l~~~~~ 203 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG---LSTLSVLALAMLAVAIFEPALGGLRTYLF 203 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444445566666667777777777777888888888887653211 12223344555666677888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 751 SVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRL 830 (1255)
Q Consensus 751 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l 830 (1255)
...+.++..++|.++|++++++|++||+ ++++|++++|+ +|++.+++++...+..++..++.+++.++++++++|.+
T Consensus 204 ~~~~~~~~~~l~~~~~~~l~~l~~~~f~--~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 280 (694)
T TIGR01846 204 AHLTSRIDVELGARLYRHLLGLPLGYFE--SRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTL 280 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHcC--CCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 78899999999 79999999988877777777776777788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHH
Q 000846 831 TLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWY 910 (1255)
Q Consensus 831 ~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1255)
++++++++|+.++..+...+..++..++..+...+....+.|++.|+++||++|.|+.+.++|.+..++..+...+..+.
T Consensus 281 ~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 360 (694)
T TIGR01846 281 TGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNL 360 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888777766666666666677777788889999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCC
Q 000846 911 SGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSE 990 (1255)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 990 (1255)
......+.+++..+..++++|+|++++..|.+|+|+++++.++...+..++..+...+..++.+..+.+|+.++++.+++
T Consensus 361 ~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 440 (694)
T TIGR01846 361 GNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTE 440 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88888888888899999999999999999999999999999999999999999999999999999999999999987665
Q ss_pred CCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEE
Q 000846 991 IDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFM 1070 (1255)
Q Consensus 991 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~i 1070 (1255)
.+... ... .....+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++
T Consensus 441 ~~~~~--~~~-~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~i 516 (694)
T TIGR01846 441 PRSAG--LAA-LPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLV 516 (694)
T ss_pred ccCCC--CCC-CCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 43211 111 11235789999999999743 356999999999999999999999999999999999999999999999
Q ss_pred CCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCCh
Q 000846 1071 DEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSG 1150 (1255)
Q Consensus 1071 dG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSg 1150 (1255)
||+|+++++.+++|++|+||||||.+|++||||||++++|+++++++++|++.+++++++.++|+||||.+||+|.+|||
T Consensus 517 dg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSg 596 (694)
T TIGR01846 517 DGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSG 596 (694)
T ss_pred CCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHH
Q 000846 1151 GQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHN 1230 (1255)
Q Consensus 1151 GQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~ 1230 (1255)
|||||+|||||++++|+|||||||||+||+++|+.+.+.|++..+++|+|+||||++++..||+|+||++|+++|.|+|+
T Consensus 597 Gq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~ 676 (694)
T TIGR01846 597 GQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHE 676 (694)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHhhhcCchhHHHHhhhc
Q 000846 1231 ELVALSRGGAYYSLIKPQG 1249 (1255)
Q Consensus 1231 eLl~~~~~g~y~~l~~~~~ 1249 (1255)
||+++ +|.|++|++.|.
T Consensus 677 ~l~~~--~~~y~~l~~~~~ 693 (694)
T TIGR01846 677 ELLAL--QGLYARLWQQQS 693 (694)
T ss_pred HHHHc--CChHHHHHHhhc
Confidence 99986 899999998663
No 32
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-82 Score=715.31 Aligned_cols=551 Identities=26% Similarity=0.400 Sum_probs=462.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChh-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 689 CIASIGSGAVQPINAYCVGSLISIYFRTDKS-EIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLG 767 (1255)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~ 767 (1255)
+++.+.+.......|.++...++.....+.. ............|.++.+...++..++.+.+.++.+++.+..-.++|+
T Consensus 36 l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~ 115 (591)
T KOG0057|consen 36 LGLLLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFR 115 (591)
T ss_pred HHHHHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344567777888888888766422111 112223334556777888899999999999999999999999999999
Q ss_pred HHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 768 KLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYI-VGLVLSWRLTLVMIAVQPLVIGSYY 846 (1255)
Q Consensus 768 ~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~-~~~~~~~~l~l~~l~~~pl~~~~~~ 846 (1255)
+++.++.+||. +..+|.+.+.+..-...+...+.-.+..++..++.+..... +..-.++..+++.+..+.....+.+
T Consensus 116 ~~~~ld~~~~~--~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti 193 (591)
T KOG0057|consen 116 HLMSLDLSFFL--SRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTI 193 (591)
T ss_pred HHHhhhHHhhc--CCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEE
Confidence 99999999997 67799999999999998888888887777777665544443 2233455555555544444443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 847 SRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTAST 926 (1255)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (1255)
.........+++...+.......+.|++.|.++||+||.|++..++|...+.+..+...+.....++....-..+.....
T Consensus 194 ~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~ 273 (591)
T KOG0057|consen 194 VVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVAL 273 (591)
T ss_pred eehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHH
Confidence 33333444556677777888899999999999999999999999999999999998888877766666666666666677
Q ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCcccccccc
Q 000846 927 ALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMR 1006 (1255)
Q Consensus 927 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1255)
+.+.+.|..-+..+.++++++............++..+.....++.++..-.+.++...+........ +.+....+
T Consensus 274 ~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~----~~~i~~~~ 349 (591)
T KOG0057|consen 274 TFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA----ALPIELFG 349 (591)
T ss_pred HHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc----cCCcccCC
Confidence 77777788778899999999999999999999999999999999988888887777665433222111 11112256
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcc
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSH 1086 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1086 (1255)
+.|+|+||+|.|+ |++++|+++||+|++||||||||+|||||||++++|+||+| ++|+|+|||+||++++++.+|+.
T Consensus 350 ~~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~ 426 (591)
T KOG0057|consen 350 GSIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQS 426 (591)
T ss_pred CcEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhh
Confidence 7899999999996 45679999999999999999999999999999999999999 99999999999999999999999
Q ss_pred eEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 000846 1087 IALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNP 1166 (1255)
Q Consensus 1087 i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p 1166 (1255)
||+||||.+||++||.+||.||.|.+++||+.++|+.+++||.+.++|+||+|.|||+|..||||||||++||||++++|
T Consensus 427 Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda 506 (591)
T KOG0057|consen 427 IGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDA 506 (591)
T ss_pred eeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHh
Q 000846 1167 SILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIK 1246 (1255)
Q Consensus 1167 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~ 1246 (1255)
+|+++|||||+||.+||+.|.+.|.+...++|+|+|+||++++++||+|+||++|+|+|.|+|+||++. .+.|+++|.
T Consensus 507 ~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~--s~~~~~~w~ 584 (591)
T KOG0057|consen 507 PILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAP--SELYADLWT 584 (591)
T ss_pred CeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhh--hhHHHHHhc
Confidence 999999999999999999999999998999999999999999999999999999999999999999984 888999997
Q ss_pred hhcC
Q 000846 1247 PQGG 1250 (1255)
Q Consensus 1247 ~~~~ 1250 (1255)
.|..
T Consensus 585 ~~~~ 588 (591)
T KOG0057|consen 585 TQTS 588 (591)
T ss_pred cccc
Confidence 7653
No 33
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.2e-81 Score=773.86 Aligned_cols=568 Identities=22% Similarity=0.301 Sum_probs=482.7
Q ss_pred CCchHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCC-CcccchHHHHHHHHHHHHHHHHHHHH
Q 000846 1 MGGNDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSS-SLSNDTVDKYTLRLLYVAIGVGLSAF 79 (1255)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (1255)
|..++++++|.+++++ .++++++++++..+.....++++++++|........ ... .........+++++++..++.+
T Consensus 1 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 78 (574)
T PRK11160 1 MRALLPFLKLYKRHWF-MLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYS-FNYMLPAAGVRGAAIGRTAGRY 78 (574)
T ss_pred CchhHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhh-HHHHhHHHHHHHHHHHHHHHHH
Confidence 4456678888766544 345666666666655556668889999864311110 000 0011112233445567778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 80 VEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLL 159 (1255)
Q Consensus 80 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 159 (1255)
++.++.++.+.++..++|.++|++++++|+.+|++ .++|++++|+++|++.+++++...++.++.+++.+++.++
T Consensus 79 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~-----~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (574)
T PRK11160 79 GERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLAR-----YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTI 153 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhcc-----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997 7788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHH
Q 000846 160 FSFILSWRLSLAALPLTLMFIV-PGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKT 238 (1255)
Q Consensus 160 ~~~~~~~~l~l~~l~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~ 238 (1255)
++++++|++++++++++|++++ +..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++.
T Consensus 154 ~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~ 233 (574)
T PRK11160 154 GLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQW 233 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHH
Confidence 9999999999998888877654 346677777888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 000846 239 MELGIKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMG-GLSVLGALPNLTAITEAKVAAT 316 (1255)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~ 316 (1255)
.+...+..+..+...++. .+..+..++++++|+++ .+|.++.|.+++++.+.... ..++..+...+..++++..+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 312 (574)
T PRK11160 234 LAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASAR 312 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888877766655 44455566778889888 47889999988876655443 3466666667888999999999
Q ss_pred HHHHHhcCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcc
Q 000846 317 RIFEMVDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRF 396 (1255)
Q Consensus 317 ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~ 396 (1255)
|+.++++.+++.+.... ....+..+.|+++||+|+|++. ++++|+|+||+++|||++|||||||||||||+++|+|+
T Consensus 313 ri~~ll~~~~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~ 389 (574)
T PRK11160 313 RINEITEQKPEVTFPTT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRA 389 (574)
T ss_pred HHHHHHhCCCCCCCCcc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 99999987665321111 1112235689999999999753 24699999999999999999999999999999999999
Q ss_pred cCCCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccch
Q 000846 397 YDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQ 476 (1255)
Q Consensus 397 ~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 476 (1255)
|+|++|+|++||+++++++.+++|++|+||||||++|++||+|||.++.++.+++++.++++.+++++++.+ |+|+||.
T Consensus 390 ~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~ 468 (574)
T PRK11160 390 WDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAW 468 (574)
T ss_pred CCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCch
Confidence 999999999999999999999999999999999999999999999999988999999999999999999999 9999999
Q ss_pred hcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeC
Q 000846 477 VGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKA 556 (1255)
Q Consensus 477 ~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~ 556 (1255)
+||+|.+||||||||++||||++++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++
T Consensus 469 vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~ 548 (574)
T PRK11160 469 LGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDN 548 (574)
T ss_pred hcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred CEEEEecChhHHhccCCCChhHHHHH
Q 000846 557 GKVVESGSHNELMNRGEGGEYYQMVE 582 (1255)
Q Consensus 557 G~i~~~g~~~~l~~~~~~~~~~~~~~ 582 (1255)
|++++.|+|+||+++ ++.|+++++
T Consensus 549 G~i~~~g~~~~l~~~--~g~y~~l~~ 572 (574)
T PRK11160 549 GQIIEQGTHQELLAQ--QGRYYQLKQ 572 (574)
T ss_pred CeEEEeCCHHHHHhc--CcHHHHHHh
Confidence 999999999999984 689998875
No 34
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.8e-81 Score=705.43 Aligned_cols=559 Identities=23% Similarity=0.294 Sum_probs=463.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 679 MPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLT 758 (1255)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 758 (1255)
++.|+.++++++.+++..+.......+.++++..--..... ..-+........=++++...+..+...+....+..++.
T Consensus 12 ~~~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~-~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~AtfrvL 90 (573)
T COG4987 12 KRHKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLA-YIFNVMLPSAGVRGLAILRTAARYVERLVSHDATFRVL 90 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 33566677777776666555544444445554322111110 00000111122224566777888888888888999999
Q ss_pred HHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 759 KRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQ 838 (1255)
Q Consensus 759 ~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~ 838 (1255)
..+|.++|+++...+..-.+ ...+|++++|+..|++.+++.+-..+...+..+....+..+...+++|.+++.+...+
T Consensus 91 ~~lRv~~f~kl~p~sp~~~~--r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~~l 168 (573)
T COG4987 91 SALRVRLFEKLEPLSPALLL--RYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGLIL 168 (573)
T ss_pred HHHHHHHHHhhccCChHHHH--hcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999999999999888776 6679999999999999999999999999999888887777777788988887765443
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Q 000846 839 P-LVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFS 917 (1255)
Q Consensus 839 p-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1255)
. ++++......++-++..++.+...+...+.+.|.+.|....+.||+++.+.+.+....+.+.+...+.+.+..+..++
T Consensus 169 l~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a~ 248 (573)
T COG4987 169 LLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSDAI 248 (573)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 344555666666677777778888888999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCC
Q 000846 918 SQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAG-SMTSDISKGSNAVRSVFAILDRRSEIDPDSP 996 (1255)
Q Consensus 918 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~ 996 (1255)
.+++..+..+..+.+.+..+..|..+......+++.+.....++..+. ....+..+...+++|+.++.+.+++...+.+
T Consensus 249 ~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~~~ 328 (573)
T COG4987 249 LLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTFPDE 328 (573)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCCCcc
Confidence 888888777744444444556676665444444444444444444444 5667889999999999999988877654311
Q ss_pred CCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecC
Q 000846 997 QGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIR 1076 (1255)
Q Consensus 997 ~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~ 1076 (1255)
+ .+.+.. .++++||+|+||+. ++++|+|+||++++||||||+|||||||||++++|.|.|+|++|+|.++|.|++
T Consensus 329 ~---~~~~~~-~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~ 403 (573)
T COG4987 329 Q---TATTGQ-ALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIA 403 (573)
T ss_pred c---cCCccc-eeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChh
Confidence 1 111112 79999999999965 567999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1077 NYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1077 ~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
.++.+.+|+.|++++|.++||++|+|+||.+++|++||||+|++++++++++++++.|+||||++||+|.+|||||||||
T Consensus 404 ~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRL 483 (573)
T COG4987 404 SLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRL 483 (573)
T ss_pred hCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhh
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALS 1236 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~ 1236 (1255)
||||+||+|.|++||||||.+||++||+.|.+.|.+..+|||+|+||||+..++.||||+|||+|+++|+|+|.+|+++
T Consensus 484 AlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll~~- 562 (573)
T COG4987 484 ALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELLAN- 562 (573)
T ss_pred HHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhhcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred cCchhHHHHhh
Q 000846 1237 RGGAYYSLIKP 1247 (1255)
Q Consensus 1237 ~~g~y~~l~~~ 1247 (1255)
+|.|++|++.
T Consensus 563 -~g~~~~l~q~ 572 (573)
T COG4987 563 -NGRYKRLYQL 572 (573)
T ss_pred -ccHHHHHhcc
Confidence 8999999864
No 35
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=6.2e-81 Score=795.08 Aligned_cols=562 Identities=25% Similarity=0.368 Sum_probs=487.8
Q ss_pred hHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 4 NDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGL 83 (1255)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1255)
+++++++..++++ .++..++++++..+.....+++++.++|....... . ..+..+...++++.++..++.+++.+
T Consensus 144 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~--~--~~l~~~~~~~~~~~~~~~~~~~~~~~ 218 (708)
T TIGR01193 144 LLKFIPLITRQKK-LIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM--M--GTLGIISIGLIIAYIIQQILSYIQIF 218 (708)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--h--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666654433 33344444555555555556888999997653211 1 23333344444555667788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 84 CWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFI 163 (1255)
Q Consensus 84 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1255)
+..+.+.++..++|.+++++++++|+.||++ .++|++++|++ |++.+++++...+...+.+++.++++++++++
T Consensus 219 ~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~-----~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (708)
T TIGR01193 219 LLNVLGQRLSIDIILSYIKHLFELPMSFFST-----RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVR 292 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-----CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996 77889999997 99999999998888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Q 000846 164 LSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGI 243 (1255)
Q Consensus 164 ~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~ 243 (1255)
++|++++++++.+|+++++..++.+..++..++.++..++..+.+.|.++|+++||+++.|+.+.++|.+...+..+...
T Consensus 293 ~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 372 (708)
T TIGR01193 293 QNMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSF 372 (708)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000846 244 KQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMV 322 (1255)
Q Consensus 244 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 322 (1255)
+.....+....+. .+..+..++++|+|++++.+|.+|+|.++++..+......|+.++...+..++.++.+.+|+.+++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 452 (708)
T TIGR01193 373 KYQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVY 452 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777766655444 333455677889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCcc
Q 000846 323 DRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEG 402 (1255)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 402 (1255)
+.+++.+... .....++..+.|+++||+|+|+. ++++|+|+||+|++||++|||||||||||||+++|+|+|+|++|
T Consensus 453 ~~~~e~~~~~-~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G 529 (708)
T TIGR01193 453 LVDSEFINKK-KRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSG 529 (708)
T ss_pred cCCCcccccc-cccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCc
Confidence 8765532211 10112334578999999999973 34799999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccC-CCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCC
Q 000846 403 EVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFG-KDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLG 481 (1255)
Q Consensus 403 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g 481 (1255)
+|++||+|+++++.+++|++||||||+|+||++||+|||.++ .++.++++++++++.+++++++.++|+|+||.+||+|
T Consensus 530 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G 609 (708)
T TIGR01193 530 EILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEG 609 (708)
T ss_pred EEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCC
Confidence 999999999999999999999999999999999999999998 4778999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEE
Q 000846 482 FQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVE 561 (1255)
Q Consensus 482 ~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~ 561 (1255)
.+|||||||||+||||++++|+|||||||||+||+++++.+.+.|++. +++|+|+||||+++++.||+|++|++|++++
T Consensus 610 ~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~ 688 (708)
T TIGR01193 610 SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIE 688 (708)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999999875 6899999999999999999999999999999
Q ss_pred ecChhHHhccCCCChhHHHHH
Q 000846 562 SGSHNELMNRGEGGEYYQMVE 582 (1255)
Q Consensus 562 ~g~~~~l~~~~~~~~~~~~~~ 582 (1255)
.|+|+||+++ .+.|+++++
T Consensus 689 ~G~~~~L~~~--~~~y~~l~~ 707 (708)
T TIGR01193 689 QGSHDELLDR--NGFYASLIH 707 (708)
T ss_pred ECCHHHHHhc--CCcHHHHhh
Confidence 9999999984 678888764
No 36
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.4e-80 Score=792.95 Aligned_cols=561 Identities=25% Similarity=0.371 Sum_probs=484.2
Q ss_pred HHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 5 DGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLC 84 (1255)
Q Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1255)
+.++++..++++ .+...++++++..+.....|++++.++|....... . ..+..+...++++.++.+++.+++.++
T Consensus 143 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~--~--~~l~~~~~~~~~~~~~~~~~~~~~~~~ 217 (710)
T TIGR03796 143 RALWRRLRGSRG-ALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR--Q--DWLRPLLLGMGLTALLQGVLTWLQLYY 217 (710)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--h--hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555544332 22333444444444444445788889987543211 1 223333444445556677888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 85 WTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFIL 164 (1255)
Q Consensus 85 ~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1255)
..+.+.++..++|.++|++++++|+++|++ .++|++++|+++| +.+++++...+...+.+++.+++++++++++
T Consensus 218 ~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~-----~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 291 (710)
T TIGR03796 218 LRRLQIKLAVGMSARFLWHILRLPVRFFAQ-----RHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLY 291 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHcC-----CcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999997 6777999999988 7899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 000846 165 SWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIK 244 (1255)
Q Consensus 165 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 244 (1255)
+|++++++++.+|+++++..++.+...+..++.++..++..+.+.|.++|+++||++++|+.+.++|.+...+..+...+
T Consensus 292 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 371 (710)
T TIGR03796 292 DPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQE 371 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998889999999998889999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000846 245 QGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVD 323 (1255)
Q Consensus 245 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~ 323 (1255)
.....++...+. .+..+..++++|+|++++.+|.+++|.++++..+......|+..+...+..+++++.+.+|+.++++
T Consensus 372 ~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~ 451 (710)
T TIGR03796 372 LGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLR 451 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 777776665544 4445566778899999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCc---c-cccC-CCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC
Q 000846 324 RTPAIDTDDK---M-GKAL-SYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD 398 (1255)
Q Consensus 324 ~~~~~~~~~~---~-~~~~-~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~ 398 (1255)
.+++.+.... . .... +...+.|+++||+|+|++. ++++|+|+||+|++||++|||||||||||||+++|+|+|+
T Consensus 452 ~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~ 530 (710)
T TIGR03796 452 NPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ 530 (710)
T ss_pred CCCccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 7654322110 0 0111 2345789999999999853 3579999999999999999999999999999999999999
Q ss_pred CCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhc
Q 000846 399 PVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVG 478 (1255)
Q Consensus 399 ~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~ 478 (1255)
|++|+|.+||+|+++++.+++|++|+||||+|++|++||+|||.++.++.++++++++++.+++++++.++|+|+||.+|
T Consensus 531 p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~ 610 (710)
T TIGR03796 531 PWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELA 610 (710)
T ss_pred CCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceec
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCE
Q 000846 479 QLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGK 558 (1255)
Q Consensus 479 ~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~ 558 (1255)
|+|.+|||||||||+||||++++|+|||||||||+||+++++.+.+.|++ .++|+|+||||+++++.||+|++|++|+
T Consensus 611 e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~ 688 (710)
T TIGR03796 611 EGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGK 688 (710)
T ss_pred cCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 99999999999999999999999999999999999999999999999986 5899999999999999999999999999
Q ss_pred EEEecChhHHhccCCCChhHHHH
Q 000846 559 VVESGSHNELMNRGEGGEYYQMV 581 (1255)
Q Consensus 559 i~~~g~~~~l~~~~~~~~~~~~~ 581 (1255)
+++.|+|+||+++ ++.|++++
T Consensus 689 i~~~G~~~~Ll~~--~~~y~~l~ 709 (710)
T TIGR03796 689 VVQRGTHEELWAV--GGAYARLI 709 (710)
T ss_pred EEEecCHHHHHHc--CCcHHHHh
Confidence 9999999999974 67888775
No 37
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.8e-80 Score=774.13 Aligned_cols=564 Identities=34% Similarity=0.515 Sum_probs=508.3
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 673 RLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSV 752 (1255)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 752 (1255)
.++++.++.++.++++++++++.+++.+..++.++.+++....... ......+...++++.++..++.+++.+...+
T Consensus 4 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (571)
T TIGR02203 4 RLWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD---RSVLWWVPLVVIGLAVLRGICSFVSTYLLSW 80 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555667778888888888888888888888888876543221 1122233445666777788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 753 MGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTL 832 (1255)
Q Consensus 753 ~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l 832 (1255)
.+.++...+|+.+++++++.|.++|+ +.++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++
T Consensus 81 ~~~~~~~~lr~~l~~~~~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~ 158 (571)
T TIGR02203 81 VSNKVVRDIRVRMFEKLLGLPVSFFD--RQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTL 158 (571)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhC--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999998 6789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHH
Q 000846 833 VMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSG 912 (1255)
Q Consensus 833 ~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1255)
+++++.|+.++..+...+..+....+..+...+..+.+.|.++|+++||+++.++++.++|.+..++..+...+..+...
T Consensus 159 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (571)
T TIGR02203 159 IVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGS 238 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888777777777777788888888999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q 000846 913 IGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEID 992 (1255)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 992 (1255)
....+..++..+..++++++|++++..|.+++|.++++..+...+..++..+...+..+..++.+.+|+.++++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 318 (571)
T TIGR02203 239 ISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKD 318 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 88888888888899999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECC
Q 000846 993 PDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDE 1072 (1255)
Q Consensus 993 ~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG 1072 (1255)
.... +. .+..+.|+++||+|+|+++ ++++|+|+||+|+|||+++|+|+||||||||+++|+|+|+|++|+|++||
T Consensus 319 ~~~~---~~-~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g 393 (571)
T TIGR02203 319 TGTR---AI-ERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDG 393 (571)
T ss_pred CCCC---CC-CCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECC
Confidence 2111 11 1234679999999999754 45799999999999999999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCC-CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChH
Q 000846 1073 QDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKA-DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGG 1151 (1255)
Q Consensus 1073 ~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~-~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgG 1151 (1255)
+|+++++.+++|++|+||||||++|+|||||||.++++ +.++++++++++.+++++++.++|+||||.+||+|.+||||
T Consensus 394 ~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 473 (571)
T TIGR02203 394 HDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGG 473 (571)
T ss_pred EeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHH
Confidence 99999999999999999999999999999999999987 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHH
Q 000846 1152 QKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNE 1231 (1255)
Q Consensus 1152 QkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~e 1231 (1255)
||||||||||++++|+|||||||||+||++|++.|.+.|++..+++|+|+||||++.+..||+|++|++|++++.|+|++
T Consensus 474 qrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~ 553 (571)
T TIGR02203 474 QRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNE 553 (571)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHH
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred HHhhhcCchhHHHHhhh
Q 000846 1232 LVALSRGGAYYSLIKPQ 1248 (1255)
Q Consensus 1232 Ll~~~~~g~y~~l~~~~ 1248 (1255)
|++. ++.|++++..+
T Consensus 554 l~~~--~~~~~~~~~~~ 568 (571)
T TIGR02203 554 LLAR--NGLYAQLHNMQ 568 (571)
T ss_pred HHHc--CCHHHHHHHHh
Confidence 9985 78999998765
No 38
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.4e-80 Score=786.61 Aligned_cols=553 Identities=24% Similarity=0.335 Sum_probs=481.9
Q ss_pred HHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 5 DGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLC 84 (1255)
Q Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1255)
+.++++..++++ .+...++++++..++....|++++.++|....... . ..+..+.+.++++.++..++.+++.++
T Consensus 136 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~--~--~~l~~~~~~~~~~~~~~~~~~~~~~~~ 210 (694)
T TIGR03375 136 HWFWSTLKESWP-LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA--F--ETLWVLAIGVALAIVFDFVLKTLRSYF 210 (694)
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc--H--hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555544333 33344444455455555556888999997542211 1 223333334444555667888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 85 WTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFIL 164 (1255)
Q Consensus 85 ~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1255)
..+.+.++..++|.++|+|++++|+.| ++ .++|++++|+ +|++.+++++...+...+.+++.+++++++++++
T Consensus 211 ~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~-----~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 283 (694)
T TIGR03375 211 LDVAGKKADLILSAKLFERVLGLRMEA-RP-----ASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAII 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccc-CC-----CChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997 54 6788999999 7999999999988888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 000846 165 SWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIK 244 (1255)
Q Consensus 165 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 244 (1255)
+|+++++.++.+|+++++..++.++.++..++..+..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+
T Consensus 284 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR03375 284 GGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLK 363 (694)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000846 245 QGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVD 323 (1255)
Q Consensus 245 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~ 323 (1255)
.....+....+. .+..+..++++|+|++++.+|.+++|.++++..+......|+..+...+..++.++.+.+|+.++++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~ 443 (694)
T TIGR03375 364 SRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQ 443 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 888777666555 4444566778899999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccE
Q 000846 324 RTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGE 403 (1255)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~ 403 (1255)
.+++.+... .....++..+.|+|+||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+
T Consensus 444 ~~~e~~~~~-~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~ 521 (694)
T TIGR03375 444 LPVERPEGT-RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGS 521 (694)
T ss_pred CCCCCCCCC-CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 765432211 111122345789999999999743 357999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCC
Q 000846 404 VLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQ 483 (1255)
Q Consensus 404 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 483 (1255)
|.+||+|+++++.+++|++|+||||+|++|++||+|||.++.++.++++++++++.+++++++.++|+|+||.+||+|.+
T Consensus 522 I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~ 601 (694)
T TIGR03375 522 VLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRS 601 (694)
T ss_pred EEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCC
Confidence 99999999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEec
Q 000846 484 MSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESG 563 (1255)
Q Consensus 484 LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g 563 (1255)
||||||||++||||++++|+|||||||||+||+++++.+++.|.+..+++|+|+||||+++++.||+|++|++|+++|+|
T Consensus 602 LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G 681 (694)
T TIGR03375 602 LSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADG 681 (694)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred ChhHHhcc
Q 000846 564 SHNELMNR 571 (1255)
Q Consensus 564 ~~~~l~~~ 571 (1255)
+|+||+++
T Consensus 682 ~~~eLl~~ 689 (694)
T TIGR03375 682 PKDQVLEA 689 (694)
T ss_pred CHHHHHHH
Confidence 99999875
No 39
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.6e-80 Score=708.24 Aligned_cols=550 Identities=24% Similarity=0.319 Sum_probs=479.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 22 GTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYL 101 (1255)
Q Consensus 22 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 101 (1255)
..+++.+.++....+.+++...++.+..... . ..+..+...++++.++..++.+.+.....+.+.++...+|..++
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~---~-~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l 80 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQL---F-QSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVL 80 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555666666666543211 1 34455566667777888899999999999999999999999999
Q ss_pred HHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 102 KSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIV 181 (1255)
Q Consensus 102 ~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~ 181 (1255)
+++.+.++.+-++ .++|+..+.++..++.++.+++..++.++...+.++..++.+|+++|.-+++.++..|++.+
T Consensus 81 ~~l~~~gp~~~~~-----~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPl 155 (559)
T COG4988 81 DKLAKLGPAFIAQ-----KPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPL 155 (559)
T ss_pred HHHHhCChhhhcC-----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999886 66779999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000846 182 PGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSM-GMIY 260 (1255)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 260 (1255)
.+.++++..++..+++...+.+.++...+.++|+.|+|.|+..+...+++.+..++.++..++.-++.-...... ++.+
T Consensus 156 fMilvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~ 235 (559)
T COG4988 156 FMILVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAY 235 (559)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998887766554444444 5556
Q ss_pred HHHHHHHHHHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccCC
Q 000846 261 VGWAFQAWVGSYLVTE-KGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKALS 339 (1255)
Q Consensus 261 ~~~~~~~~~g~~lv~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~ 339 (1255)
.+.+++..+.+...+. |.++....+.+++..-=.+.|+..+...++.-+.+.++.++++.+++.+++..+........+
T Consensus 236 lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~ 315 (559)
T COG4988 236 LSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVAN 315 (559)
T ss_pred HHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcccccccc
Confidence 6666555444444455 788888777777666667888999989999999999999999999987765332221111222
Q ss_pred CccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHH
Q 000846 340 YVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWL 419 (1255)
Q Consensus 340 ~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~ 419 (1255)
....+++++|++|+||+++ ++++|+||++++|+++||||+||||||||+++|+|+++|++|+|.+||+++.+++.+.|
T Consensus 316 ~~~~ei~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~ 393 (559)
T COG4988 316 EPPIEISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAW 393 (559)
T ss_pred CCCceeeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHH
Confidence 2234566679999998643 79999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 420 RSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 420 r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
|++++||+|+|++|++||||||.+++++.+++++.++++.+++.+++.. |+|+||.+||+|.+|||||+||++|||||+
T Consensus 394 ~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll 472 (559)
T COG4988 394 RKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALL 472 (559)
T ss_pred HhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHH
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQ 579 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 579 (1255)
++++++|||||||+||.+||+.|.+.|.++.+++|+|+||||++.+..||+|+||++|+++++|+|++|.++ .+.|++
T Consensus 473 ~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~--~~~y~~ 550 (559)
T COG4988 473 SPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK--QGLYAN 550 (559)
T ss_pred CCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc--CcHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999884 789999
Q ss_pred HHHHHh
Q 000846 580 MVELQQ 585 (1255)
Q Consensus 580 ~~~~~~ 585 (1255)
|+..|+
T Consensus 551 l~~~q~ 556 (559)
T COG4988 551 LLKQQE 556 (559)
T ss_pred HHHHHh
Confidence 998775
No 40
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.4e-80 Score=765.81 Aligned_cols=525 Identities=22% Similarity=0.281 Sum_probs=452.7
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 674 LLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVM 753 (1255)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 753 (1255)
++++.++.++.+++.++++++..++....+++++.+++....... ......+...++++.++..++.++..++..+.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (529)
T TIGR02868 4 ILPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP---VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDA 80 (529)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666667777777777777888888889988886543211 00000111112234556677788888888899
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 754 GEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLV 833 (1255)
Q Consensus 754 ~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~ 833 (1255)
+.++..++|.++|+++++.|.+||+ ++++|++++|+++|++.++..+...+..++..++.+++.++++++++|.++++
T Consensus 81 ~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 158 (529)
T TIGR02868 81 ALRSLGRLRVRVYDRLARLALAGRR--RFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALV 158 (529)
T ss_pred HHHHHHHHHHHHHHHhhccCccccc--cCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999999999999999999999998 77899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHH
Q 000846 834 MIAVQPLVIGSY-YSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSG 912 (1255)
Q Consensus 834 ~l~~~pl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1255)
+++.+|++.... +...+..+...++.++..++....+.|.++|+++||+|+.++.+.++|.+..++..+...+..+..+
T Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02868 159 LAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATG 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777765443 3333334444555666778888999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q 000846 913 IGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEID 992 (1255)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 992 (1255)
....+..++..+..++++++|++++..|.++.|.+.++..+......++..+...+..+..+..+.+|+.++++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 318 (529)
T TIGR02868 239 LGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRP 318 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcC
Confidence 88888888888888999999999999999999999999988888889999999999999999999999999998765432
Q ss_pred CCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECC
Q 000846 993 PDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDE 1072 (1255)
Q Consensus 993 ~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG 1072 (1255)
......+...++..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||
T Consensus 319 ~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g 396 (529)
T TIGR02868 319 EGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDG 396 (529)
T ss_pred CCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECC
Confidence 21111011111234679999999999743 3699999999999999999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHH
Q 000846 1073 QDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1073 ~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1152 (1255)
+|++++ .+++|++|+||||||+||+|||||||++|+|+++||++++|++.++++|||.++|+||||++||+|.+|||||
T Consensus 397 ~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQ 475 (529)
T TIGR02868 397 VSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGE 475 (529)
T ss_pred EEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCc
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRL 1206 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl 1206 (1255)
|||||||||++++|+|||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 476 rQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 476 RQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999999988999999999996
No 41
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.9e-79 Score=766.05 Aligned_cols=566 Identities=27% Similarity=0.406 Sum_probs=488.4
Q ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 670 SQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYS 749 (1255)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 749 (1255)
.+|+++++.++.+..+.+.++++++..++....+++++.+++...... ....+.+.++++.++..+..++..+.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (588)
T PRK13657 6 LYARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG------DIFPLLAAWAGFGLFNIIAGVLVARH 79 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777778888888888888888888998888654321 11112222333334444444444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 750 FSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWR 829 (1255)
Q Consensus 750 ~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~ 829 (1255)
..+...++..+++.++|+++++.|..+|+ +.++|++++|+++|++.+...+...+..++..++..++.++++++++|.
T Consensus 80 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (588)
T PRK13657 80 ADRLAHRRRLAVLTEYFERIIQLPLAWHS--QRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWR 157 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHC--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666667778999999999999998 6789999999999999999888888888888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHH
Q 000846 830 LTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSW 909 (1255)
Q Consensus 830 l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (1255)
+++++++++|+.+.......+..+...++..+...+....+.|.+.|+++||+|+.++.+.+++.+..++..+...+...
T Consensus 158 l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (588)
T PRK13657 158 LSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLS 237 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888776666666666666667777778889999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccC
Q 000846 910 YSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRS 989 (1255)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 989 (1255)
.......+.+++..+...+++++|++++..|.+++|+++++..+......++..+...+..+..+..+.+|+.++++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~ 317 (588)
T PRK13657 238 WWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVP 317 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 87777888888888888899999999999999999999999999888999999999999999999999999999987654
Q ss_pred CCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEE
Q 000846 990 EIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVF 1069 (1255)
Q Consensus 990 ~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1069 (1255)
+.+... ..... .+..+.|+++||+|+||++ +++|+|+||+++|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 318 ~~~~~~-~~~~~-~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~ 393 (588)
T PRK13657 318 DVRDPP-GAIDL-GRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRIL 393 (588)
T ss_pred ccCCCC-CCCCc-CCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEE
Confidence 422111 11111 1134679999999999742 4699999999999999999999999999999999999999999999
Q ss_pred ECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCC
Q 000846 1070 MDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLS 1149 (1255)
Q Consensus 1070 idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1149 (1255)
+||+|+++++.+++|++|+||||||.+|+|||||||++++|+.+|++++++++.+++++++.++|+|+||.+|++|.+||
T Consensus 394 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LS 473 (588)
T PRK13657 394 IDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLS 473 (588)
T ss_pred ECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCH
Q 000846 1150 GGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSH 1229 (1255)
Q Consensus 1150 gGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~ 1229 (1255)
||||||||||||++++|+|||||||||+||+++|+.|.+.|++..+++|+|+||||++.++.||+|++|++|+++|.|+|
T Consensus 474 gGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~ 553 (588)
T PRK13657 474 GGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSF 553 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHHhhhcCchhHHHHhhhc
Q 000846 1230 NELVALSRGGAYYSLIKPQG 1249 (1255)
Q Consensus 1230 ~eLl~~~~~g~y~~l~~~~~ 1249 (1255)
++|+++ ++.|++|+..+.
T Consensus 554 ~~l~~~--~~~y~~l~~~~~ 571 (588)
T PRK13657 554 DELVAR--GGRFAALLRAQG 571 (588)
T ss_pred HHHHHC--CChHHHHHHHhh
Confidence 999975 899999998663
No 42
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2.9e-79 Score=759.71 Aligned_cols=565 Identities=25% Similarity=0.373 Sum_probs=491.4
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 671 QWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSF 750 (1255)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 750 (1255)
+++++++.++.++.+.++++++++..++....|++++.+++.....+. ...+.+.+++..++..+..++..+..
T Consensus 7 ~~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (585)
T TIGR01192 7 YVRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD------VLPTLALWAGFGVFNTIAYVLVAREA 80 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777788888888888888889999999999999987653211 11112222233444445555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 751 SVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRL 830 (1255)
Q Consensus 751 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l 830 (1255)
.....++..++|.++|++++++|++||+ ++++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.+
T Consensus 81 ~~~~~~~~~~lr~~~~~~l~~l~~~~~~--~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 158 (585)
T TIGR01192 81 DRLAHGRRATLLTEAFGRIISMPLSWHQ--QRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRL 158 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666677777888999999999999998 67899999999999999999998888888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHH
Q 000846 831 TLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWY 910 (1255)
Q Consensus 831 ~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1255)
++++++++|+.++......+..+...++..+...+..+.+.|++.|+++||+|+.++.+.+++.+..++..+...+..+.
T Consensus 159 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (585)
T TIGR01192 159 SIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDW 238 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888887776666666666666666777778889999999999999999999999999999999888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCC
Q 000846 911 SGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSE 990 (1255)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 990 (1255)
......+..++..+..++++++|++++..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~ 318 (585)
T TIGR01192 239 WALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQ 318 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 77777777788888888899999999999999999999999888888999999999999999999999999999886544
Q ss_pred CCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEE
Q 000846 991 IDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFM 1070 (1255)
Q Consensus 991 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~i 1070 (1255)
...... ... ..+..+.|+++||+|+|+++ .++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 319 ~~~~~~-~~~-~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~ 394 (585)
T TIGR01192 319 REEPAD-APE-LPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILI 394 (585)
T ss_pred ccCCcc-CCC-CCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEE
Confidence 321111 001 11134679999999999742 46899999999999999999999999999999999999999999999
Q ss_pred CCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCCh
Q 000846 1071 DEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSG 1150 (1255)
Q Consensus 1071 dG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSg 1150 (1255)
||+|+++++.+++|++++||||||.+|++||+|||.++.|++++++++++++.+++++++.++|+|+||.+|++|.+|||
T Consensus 395 ~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSg 474 (585)
T TIGR01192 395 DGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSG 474 (585)
T ss_pred CCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHH
Q 000846 1151 GQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHN 1230 (1255)
Q Consensus 1151 GQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~ 1230 (1255)
||||||+|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+
T Consensus 475 Gq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~ 554 (585)
T TIGR01192 475 GERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQ 554 (585)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred HHHhhhcCchhHHHHhhhc
Q 000846 1231 ELVALSRGGAYYSLIKPQG 1249 (1255)
Q Consensus 1231 eLl~~~~~g~y~~l~~~~~ 1249 (1255)
+|+++ +|.|+++++.+.
T Consensus 555 ~l~~~--~~~y~~l~~~~~ 571 (585)
T TIGR01192 555 ELIQK--DGRFYKLLRRSG 571 (585)
T ss_pred HHHHC--CChHHHHHHhCc
Confidence 99985 899999998763
No 43
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.3e-79 Score=765.08 Aligned_cols=564 Identities=31% Similarity=0.463 Sum_probs=486.6
Q ss_pred HHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 5 DGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLC 84 (1255)
Q Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1255)
+.++++.+++++. +++.+++.++..+.....+++++.++|....... . ..+....+.+++++++..++.+++.++
T Consensus 14 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~---~-~~~~~~~~~~~~~~l~~~~~~~~~~~~ 88 (582)
T PRK11176 14 RRLWPTIAPFKAG-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD---R-SVLKWMPLVVIGLMILRGITSFISSYC 88 (582)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc---h-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555544443 3444455555554545556788888886542211 0 122222333344566677788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 85 WTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFIL 164 (1255)
Q Consensus 85 ~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1255)
..+.+.++..++|.++++++++.|..+|++ .++|++++|+++|++.+++.+...+..++.+++.+++.+++++++
T Consensus 89 ~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~-----~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (582)
T PRK11176 89 ISWVSGKVVMTMRRRLFGHMMGMPVSFFDK-----QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYY 163 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-----CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999996 677899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 000846 165 SWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIK 244 (1255)
Q Consensus 165 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 244 (1255)
+|++++++++++|+.+++..++.++.++..++.++..++..+...|.++|++++|+|+.|+.+.++|++..++..+...+
T Consensus 164 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (582)
T PRK11176 164 SWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMK 243 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999898888888889999998889999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000846 245 QGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVD 323 (1255)
Q Consensus 245 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~ 323 (1255)
..+..++..... .+..+..++++++|++++.+|.+++|.+++++.+......|+..+...+..+++++.+.+|+.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~ 323 (582)
T PRK11176 244 MVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILD 323 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 877776655544 4444556677888999999999999999988888888888999999999999999999999999998
Q ss_pred CCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccE
Q 000846 324 RTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGE 403 (1255)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~ 403 (1255)
.+++.+... ...++..+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|+|+++|++|+
T Consensus 324 ~~~~~~~~~---~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~ 399 (582)
T PRK11176 324 LEQEKDEGK---RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGE 399 (582)
T ss_pred CCCcCCCCC---cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCce
Confidence 654322111 1122334679999999999753 357999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCC-CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCC
Q 000846 404 VLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDG-ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGF 482 (1255)
Q Consensus 404 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 482 (1255)
|++||+|+++++.+++|++|+||||||++|++||+|||.++.++ .++++++++++.++++++++++|+|+||.+|++|.
T Consensus 400 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~ 479 (582)
T PRK11176 400 ILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGV 479 (582)
T ss_pred EEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCC
Confidence 99999999999999999999999999999999999999998764 78999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 000846 483 QMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVES 562 (1255)
Q Consensus 483 ~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~ 562 (1255)
+||||||||++|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|+++|.
T Consensus 480 ~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~ 559 (582)
T PRK11176 480 LLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVER 559 (582)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred cChhHHhccCCCChhHHHHHHH
Q 000846 563 GSHNELMNRGEGGEYYQMVELQ 584 (1255)
Q Consensus 563 g~~~~l~~~~~~~~~~~~~~~~ 584 (1255)
|+|++++++ ++.|+++++.|
T Consensus 560 g~~~~l~~~--~~~y~~l~~~~ 579 (582)
T PRK11176 560 GTHAELLAQ--NGVYAQLHKMQ 579 (582)
T ss_pred CCHHHHHhC--CChHHHHHHHH
Confidence 999999984 68899998755
No 44
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=9e-79 Score=760.81 Aligned_cols=568 Identities=34% Similarity=0.538 Sum_probs=495.8
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 673 RLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSV 752 (1255)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 752 (1255)
.++++.++.+..+.+.++++++.+.+....++.+..+++....... ......+..+++++.++..+..+++.+....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS---SGLLNRYFAFLLVVALVLALGTAARFYLVTW 84 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555556666777777888888888888999998886442211 1122223344445555666777888888999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 753 MGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTL 832 (1255)
Q Consensus 753 ~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l 832 (1255)
.+.++...+|..+++++++.|.++|+ +.++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.+++
T Consensus 85 ~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (576)
T TIGR02204 85 LGERVVADIRRAVFAHLISLSPSFFD--KNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTS 162 (576)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHc--cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999998 5678999999999999999999999999899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHH
Q 000846 833 VMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSG 912 (1255)
Q Consensus 833 ~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1255)
++++.+|+.+...+...+..+...++..+...+....+.|.+.|+++||+++.++++.++|.+..++..+...+......
T Consensus 163 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (576)
T TIGR02204 163 LVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRA 242 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888776666666666777777777778888999999999999999999999999999999988888777777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q 000846 913 IGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEID 992 (1255)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 992 (1255)
....+..++..+..++++++|++++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 322 (576)
T TIGR02204 243 LLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIK 322 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCC
Confidence 66666667777777888899999999999999999999999999999999999999999999999999999998755422
Q ss_pred CCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECC
Q 000846 993 PDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDE 1072 (1255)
Q Consensus 993 ~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG 1072 (1255)
..... ...+++..+.|+|+||+|+||+++++++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++||
T Consensus 323 ~~~~~-~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g 401 (576)
T TIGR02204 323 APAHP-KTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDG 401 (576)
T ss_pred CCCCC-ccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECC
Confidence 11111 11112234679999999999854346799999999999999999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHH
Q 000846 1073 QDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1073 ~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1152 (1255)
+|+++++.+++|++|+||||||++|+|||||||.+++|+.++++++++++.+++.+++.++|+|+||++||+|.+|||||
T Consensus 402 ~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq 481 (576)
T TIGR02204 402 VDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQ 481 (576)
T ss_pred EEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHH
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHH
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||||+||||++++|+|||||||||+||+++++.|.+.+++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|
T Consensus 482 ~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l 561 (576)
T TIGR02204 482 RQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAEL 561 (576)
T ss_pred HHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHH
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred HhhhcCchhHHHHhhh
Q 000846 1233 VALSRGGAYYSLIKPQ 1248 (1255)
Q Consensus 1233 l~~~~~g~y~~l~~~~ 1248 (1255)
++. ++.|++|++.|
T Consensus 562 ~~~--~~~~~~l~~~~ 575 (576)
T TIGR02204 562 IAK--GGLYARLARLQ 575 (576)
T ss_pred HHc--CChHHHHHhhc
Confidence 875 89999999765
No 45
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-82 Score=693.88 Aligned_cols=542 Identities=30% Similarity=0.448 Sum_probs=443.5
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Q 000846 33 YPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLY--VAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVG 110 (1255)
Q Consensus 33 ~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ 110 (1255)
....+.+.++++|.+..+. .+..+..+.+..+.++ -+-+.++++-+++++|....+-..+++-..+|+|+..+++.
T Consensus 231 ~~~~pi~~k~iv~~ltap~--~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlr 308 (790)
T KOG0056|consen 231 NVSLPILSKWIVDELTAPD--TFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLR 308 (790)
T ss_pred hhhhHHhHHHHHHhhcCcc--hhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhcee
Confidence 3344577788888766322 1110111111111111 12233567778888898889999999999999999999999
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 111 FFDTQEQGSSTTFQVVSTISNDSNSIQ--VAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIVPGLLFGK 188 (1255)
Q Consensus 111 ~f~~~~~g~~~~g~l~~r~~~D~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~~~~~~~~ 188 (1255)
|.=. ..+|+++..+++..+.+. +.+...+.+.+.++...++.+ ...++||.+|+++.+..++..+......
T Consensus 309 wHL~-----rrtGeVLrvmdrGtssvtll~yvVF~i~PtllDl~va~vYF--~~~Fn~wFgLIVfl~m~lY~~~Ti~iTe 381 (790)
T KOG0056|consen 309 WHLN-----RRTGEVLRVMDRGTSSVTLLEYVVFQIGPTLLDLGVAMVYF--FIKFNIWFGLIVFLMMLLYCYVTIKITE 381 (790)
T ss_pred eeec-----ccccceeehhccCcchhhHHHHHHhhcccHHHHhhhhhhhh--hhhHhHHHHHHHHHHHHHHhheeeeeeh
Confidence 9876 567787776665444443 444444444454444333332 2346899999998888777766555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 000846 189 LMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSM-GMIYVGWAFQA 267 (1255)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 267 (1255)
...+.++++..+..+..+...+++-|.+|||-|++|+.+.+||.+...++.+...|...-..++...- .++.+.....-
T Consensus 382 WRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gs 461 (790)
T KOG0056|consen 382 WRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGS 461 (790)
T ss_pred hhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhh
Confidence 55566666666667777888899999999999999999999999999998888777644433333222 22222333333
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccCCCccceEEE
Q 000846 268 WVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKALSYVRGEIEF 347 (1255)
Q Consensus 268 ~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 347 (1255)
.+.+|+|..+.+++|+.+.+..|++...+|+..+...+..+|++.+-+|+++++++++++..+.+ ...+....+|.|+|
T Consensus 462 ll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P-~a~pl~~~~G~i~f 540 (790)
T KOG0056|consen 462 LLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP-GAPPLKVTQGKIEF 540 (790)
T ss_pred heeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC-CCCCccccCCeEEE
Confidence 45567778899999999999999999999999988899999999999999999999888765322 22334456799999
Q ss_pred EeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEec
Q 000846 348 RDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVN 427 (1255)
Q Consensus 348 ~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~ 427 (1255)
+||+|.|. +++|+|+||||+++||+++|+|||||+||||++++|.||++.++|.|+|||+||++....++|++||+||
T Consensus 541 snvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVP 618 (790)
T KOG0056|consen 541 SNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVP 618 (790)
T ss_pred EEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCccc
Confidence 99999996 4578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEE
Q 000846 428 QEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLL 507 (1255)
Q Consensus 428 Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illl 507 (1255)
||..||++||..||.|++|.+++|++.+|++.+++||.|..+|+||+|.|||+|..|||||||||||||+++++|.|++|
T Consensus 619 QDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlL 698 (790)
T KOG0056|consen 619 QDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILL 698 (790)
T ss_pred CcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHHHHHHHhhc
Q 000846 508 DEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVELQQMA 587 (1255)
Q Consensus 508 DEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~ 587 (1255)
||+|||||..+|+.||.++.++..+||.|+|+||++++-+||.|+|+++|+|+|.|+|+||+.+ ++|.|.+||+.|+..
T Consensus 699 DEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~r-dgG~Ya~MWq~qqa~ 777 (790)
T KOG0056|consen 699 DEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKR-DGGAYADMWQAQQAM 777 (790)
T ss_pred cchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhc-cCCcHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999987 589999999877654
No 46
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.4e-79 Score=757.41 Aligned_cols=544 Identities=26% Similarity=0.366 Sum_probs=474.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 000846 695 SGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEI 774 (1255)
Q Consensus 695 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 774 (1255)
..++....|++++.+++........ ......+..+++++.++..++.++..++....+.++..++|.++|++++++|+
T Consensus 7 ~~~~~~~~p~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 84 (569)
T PRK10789 7 IAMLQLIPPKVVGIIVDGVTEQHMT--TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHP 84 (569)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 3444556677888888865432111 11122334444455566677778888888889999999999999999999999
Q ss_pred cccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 775 GWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVG-LVLSWRLTLVMIAVQPLVIGSYYSRNVLMK 853 (1255)
Q Consensus 775 ~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~-~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~ 853 (1255)
+||+ ++++|++++|+++|++.++..+...+..++..++..++.++++ ++++|.+++++++++|+.+.......+..+
T Consensus 85 ~~~~--~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~ 162 (569)
T PRK10789 85 EFYL--RHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLH 162 (569)
T ss_pred HHHc--CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 6789999999999999999888888888888766666665555 589999999998888888777666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 854 SMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYG 933 (1255)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 933 (1255)
+..++.++..++....+.|++.|+++||+|+.++.+.++|.+..++..+...+..+..+....+......+...+++++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 242 (569)
T PRK10789 163 ERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGG 242 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777778888999999999999999999999999999999999888888888888777777777777888889999
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEE
Q 000846 934 GRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKN 1013 (1255)
Q Consensus 934 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~ 1013 (1255)
++++..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++...... + ..+..+.|+|+|
T Consensus 243 ~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~---~-~~~~~~~I~~~~ 318 (569)
T PRK10789 243 SWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSE---P-VPEGRGELDVNI 318 (569)
T ss_pred HHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC---C-CCCCCCcEEEEE
Confidence 999999999999999999999999999999999999999999999999999987654322111 1 112346799999
Q ss_pred EEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccC
Q 000846 1014 VFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQE 1093 (1255)
Q Consensus 1014 Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qd 1093 (1255)
|+|+|+.. +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|+||||+
T Consensus 319 v~~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 397 (569)
T PRK10789 319 RQFTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQT 397 (569)
T ss_pred EEEECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccC
Confidence 99999743 35799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEec
Q 000846 1094 PTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDE 1173 (1255)
Q Consensus 1094 p~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDE 1173 (1255)
|++|++||||||++++|++++++++++++.+++++++.++|+||||.+|++|.+||||||||++||||++++|+||||||
T Consensus 398 ~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDE 477 (569)
T PRK10789 398 PFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDD 477 (569)
T ss_pred CeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999999999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHhhhc
Q 000846 1174 ATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQG 1249 (1255)
Q Consensus 1174 aTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~~ 1249 (1255)
|||+||+++++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ +|.|++|++.|.
T Consensus 478 pts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~--~~~y~~l~~~~~ 551 (569)
T PRK10789 478 ALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ--SGWYRDMYRYQQ 551 (569)
T ss_pred ccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc--CChHHHHHHHhh
Confidence 99999999999999999998889999999999999999999999999999999999999975 899999998664
No 47
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.5e-78 Score=770.63 Aligned_cols=565 Identities=29% Similarity=0.413 Sum_probs=490.3
Q ss_pred hHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 4 NDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGL 83 (1255)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1255)
+..++++..++++ .+...++++++..++....|++++.++|...... +. ..+..+.+.++++.++..++.+++.+
T Consensus 127 ~~~~~~~~~~~~~-~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~--~~--~~l~~l~~~~~~~~~~~~~~~~l~~~ 201 (694)
T TIGR01846 127 FSWFIPAIIRYRK-QFREVLLISLALQLFALVTPLLFQVVIDKVLVHR--GL--STLSVLALAMLAVAIFEPALGGLRTY 201 (694)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--Ch--hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555543332 2333444444444444455588889999764221 11 23344444455556667788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 84 CWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFI 163 (1255)
Q Consensus 84 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1255)
+....+.++..++|.++|++++++|+.||++ .++|++++|+ +|++.+++++...+..++.+++.+++.++++++
T Consensus 202 ~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~-----~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 275 (694)
T TIGR01846 202 LFAHLTSRIDVELGARLYRHLLGLPLGYFES-----RRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFF 275 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHcCC-----CCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996 7888999999 699999999988888888888888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Q 000846 164 LSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGI 243 (1255)
Q Consensus 164 ~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~ 243 (1255)
++|++++++++++|+++++..++.+..++..++..+..++..+.+.|.++|+++||+++.|+.+.++|.+..++..+...
T Consensus 276 ~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 355 (694)
T TIGR01846 276 YSPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASF 355 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888888888888888888899999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000846 244 KQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMV 322 (1255)
Q Consensus 244 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 322 (1255)
+.....+...... .+..+..++++|+|++++.+|.+|.|.++++..+......|+..+...+..+++++.+.+|+.+++
T Consensus 356 ~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 435 (694)
T TIGR01846 356 RVTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDIL 435 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777665555 444556677889999999999999999999999988999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCcc
Q 000846 323 DRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEG 402 (1255)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 402 (1255)
+.+++.+.. .....+...+.|+++||+|+|++. ++++|+|+||+++|||++||||+||||||||+++|+|+|+|++|
T Consensus 436 ~~~~e~~~~--~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G 512 (694)
T TIGR01846 436 NSPTEPRSA--GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHG 512 (694)
T ss_pred cCCCCccCC--CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 876543221 111122345789999999999743 34699999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCC
Q 000846 403 EVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGF 482 (1255)
Q Consensus 403 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 482 (1255)
+|++||+++++++.+++|++|+||||+|++|++||+|||.++.++.++++++++|+.+++++++.++|+|+||.+|++|.
T Consensus 513 ~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~ 592 (694)
T TIGR01846 513 QVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGA 592 (694)
T ss_pred eEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 000846 483 QMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVES 562 (1255)
Q Consensus 483 ~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~ 562 (1255)
+||||||||++||||++++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++.
T Consensus 593 ~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~ 672 (694)
T TIGR01846 593 NLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAES 672 (694)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEe
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred cChhHHhccCCCChhHHHHHHH
Q 000846 563 GSHNELMNRGEGGEYYQMVELQ 584 (1255)
Q Consensus 563 g~~~~l~~~~~~~~~~~~~~~~ 584 (1255)
|+|++++++ .+.|+++++.|
T Consensus 673 g~~~~l~~~--~~~y~~l~~~~ 692 (694)
T TIGR01846 673 GRHEELLAL--QGLYARLWQQQ 692 (694)
T ss_pred CCHHHHHHc--CChHHHHHHhh
Confidence 999999984 68999998754
No 48
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.2e-78 Score=757.78 Aligned_cols=563 Identities=26% Similarity=0.382 Sum_probs=473.7
Q ss_pred HHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 6 GLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCW 85 (1255)
Q Consensus 6 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (1255)
++++|..++++ .+++.+++.++..+..+..+++++.++|....... ........+.+.++++.++..++.+++.+..
T Consensus 13 ~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (592)
T PRK10790 13 RLLAYGSPWRK-PLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGN--LPLGLVAGLAAAYVGLQLLAAGLHYAQSLLF 89 (592)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444433333 34455666666666666777899999997542211 1100111122223344455667788888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 86 TRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILS 165 (1255)
Q Consensus 86 ~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1255)
...+.++..++|.++|+++++.|.++|+. .++|++++|+++|++.+++.+...+..++.++..+++.++++++++
T Consensus 90 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~-----~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (592)
T PRK10790 90 NRAAVGVVQQLRTDVMDAALRQPLSAFDT-----QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLD 164 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC-----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999996 6778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Q 000846 166 WRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQ 245 (1255)
Q Consensus 166 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~ 245 (1255)
|++++++++++|+++++..++.+..++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+.
T Consensus 165 ~~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (592)
T PRK10790 165 WRMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQT 244 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888777777888878888888888889999999999999999999999999999999888887777776
Q ss_pred HHHHHHHH-HHH-HHHHH-HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000846 246 GFIKGLLM-GSM-GMIYV-GWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMV 322 (1255)
Q Consensus 246 ~~~~~~~~-~~~-~~~~~-~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 322 (1255)
....+... .+. .+... ..+++++.| . +..|.+++|.++++..+......|+..+...+..+.++..+++|+.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l 322 (592)
T PRK10790 245 LRLDGFLLRPLLSLFSALILCGLLMLFG-F-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELM 322 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66555432 222 11111 122223333 3 5789999999999998888899999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCcc
Q 000846 323 DRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEG 402 (1255)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 402 (1255)
+.+++.... ...+...++|+++||+|+|++ +.++|+|+||++++||++||||+||||||||+++|+|+|+|++|
T Consensus 323 ~~~~~~~~~----~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G 396 (592)
T PRK10790 323 DGPRQQYGN----DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEG 396 (592)
T ss_pred cCCCccCCC----CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCc
Confidence 865432111 111223467999999999974 34699999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCC
Q 000846 403 EVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGF 482 (1255)
Q Consensus 403 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 482 (1255)
+|.+||+|+++++.+++|++|+||||+|++|++||+|||.++. +.++++++++++.++++++++++|+|+||.+||+|.
T Consensus 397 ~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~ 475 (592)
T PRK10790 397 EIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGN 475 (592)
T ss_pred eEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCC
Confidence 9999999999999999999999999999999999999999997 688999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 000846 483 QMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVES 562 (1255)
Q Consensus 483 ~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~ 562 (1255)
+||||||||++|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.++.||+|++|++|++++.
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~ 555 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQ 555 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred cChhHHhccCCCChhHHHHHHHhhc
Q 000846 563 GSHNELMNRGEGGEYYQMVELQQMA 587 (1255)
Q Consensus 563 g~~~~l~~~~~~~~~~~~~~~~~~~ 587 (1255)
|+|+||+++ ++.|+++++.+...
T Consensus 556 G~~~~L~~~--~~~y~~l~~~~~~~ 578 (592)
T PRK10790 556 GTHQQLLAA--QGRYWQMYQLQLAG 578 (592)
T ss_pred cCHHHHHhC--CCHHHHHHHHHhhh
Confidence 999999984 68999999876433
No 49
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=9.6e-78 Score=751.33 Aligned_cols=564 Identities=30% Similarity=0.455 Sum_probs=498.1
Q ss_pred HHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 5 DGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLC 84 (1255)
Q Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1255)
+.++++..+. +..++++++++++.++..+..+++++.++|....... . ..+..+...++++.++.+++.+++.++
T Consensus 3 ~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~-~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (571)
T TIGR02203 3 RRLWSYVRPY-KAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD---R-SVLWWVPLVVIGLAVLRGICSFVSTYL 77 (571)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc---h-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566665544 3455667777777777777778888888886432111 1 223333334556667777888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 85 WTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFIL 164 (1255)
Q Consensus 85 ~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1255)
..+.+.++..++|..+++++++.|.++|++ .++|++++|+++|++.+++++...+..++.+++.+++++++++++
T Consensus 78 ~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~-----~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 152 (571)
T TIGR02203 78 LSWVSNKVVRDIRVRMFEKLLGLPVSFFDR-----QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYY 152 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-----CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999996 677899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 000846 165 SWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIK 244 (1255)
Q Consensus 165 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 244 (1255)
+|++++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++||.++.|+.+.++|.+..++..+...+
T Consensus 153 ~~~l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (571)
T TIGR02203 153 SWQLTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMK 232 (571)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000846 245 QGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVD 323 (1255)
Q Consensus 245 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~ 323 (1255)
.....+....+. .+..+..++++++|++++.+|.+|+|.++++..++.....|+..+...+..+++++.+.+|+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 312 (571)
T TIGR02203 233 MTSAGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLD 312 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 877777666555 4445666778889999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccE
Q 000846 324 RTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGE 403 (1255)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~ 403 (1255)
.+++.+... ....+..+.|+++||+|+|++. +.++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+
T Consensus 313 ~~~~~~~~~---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~ 388 (571)
T TIGR02203 313 SPPEKDTGT---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQ 388 (571)
T ss_pred CCCCCCCCC---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCe
Confidence 655432111 1112234679999999999754 357999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCC-CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCC
Q 000846 404 VLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKD-GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGF 482 (1255)
Q Consensus 404 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 482 (1255)
|++||+++++++.+++|++|+||||+|++|++|++|||.++.+ +.++++++++++.+++++++.++|+|+||.+|++|.
T Consensus 389 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~ 468 (571)
T TIGR02203 389 ILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGV 468 (571)
T ss_pred EEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCC
Confidence 9999999999999999999999999999999999999999986 789999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 000846 483 QMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVES 562 (1255)
Q Consensus 483 ~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~ 562 (1255)
+||||||||++||||++++|+|++||||||+||+++++.+.+.|++..+++|+|+||||++.+..||+|++|++|++++.
T Consensus 469 ~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~ 548 (571)
T TIGR02203 469 LLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVER 548 (571)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEee
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred cChhHHhccCCCChhHHHHHHH
Q 000846 563 GSHNELMNRGEGGEYYQMVELQ 584 (1255)
Q Consensus 563 g~~~~l~~~~~~~~~~~~~~~~ 584 (1255)
|+|++++++ .+.|+++++.+
T Consensus 549 g~~~~l~~~--~~~~~~~~~~~ 568 (571)
T TIGR02203 549 GTHNELLAR--NGLYAQLHNMQ 568 (571)
T ss_pred CCHHHHHHc--CCHHHHHHHHh
Confidence 999999874 56888776643
No 50
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.3e-81 Score=678.57 Aligned_cols=493 Identities=31% Similarity=0.452 Sum_probs=426.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000846 748 YSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVG-LVL 826 (1255)
Q Consensus 748 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~-~~~ 826 (1255)
.++...++.+...+--+.|.|+..+++.|.- +..+|.+...+.....-++..+...+...+..++-+....+++ ..+
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl--~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHL--ERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhh--hcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 4566778888888999999999999999987 5567766666666666666666666666666666554444443 456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHH
Q 000846 827 SWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLK 906 (1255)
Q Consensus 827 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~ 906 (1255)
+|+.+++.++++.+.+.+.....--.....+...+...+.+....+++-+.+|+|.|+.|+++..+|.+.++.+.+...+
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 88888777766665555444332223334556667778888889999999999999999999999999999999988877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000846 907 HSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILD 986 (1255)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~ 986 (1255)
...-.++.......+...........+...+..|.+|.|+++....++.....|+..+.....++.++..-.++.+++++
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 66655555556666667777777888888999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCc
Q 000846 987 RRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKG 1066 (1255)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G 1066 (1255)
.+.+....+ ..++......|.|.|+||+|.|. |.+|+|+|+||++++|+++||||+||+||||+.++|+||||+++|
T Consensus 242 ~~~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 242 VEAEVSDAP-DAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred cchhhccCC-CCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 876654332 22222113468899999999995 456899999999999999999999999999999999999999999
Q ss_pred eEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCC
Q 000846 1067 SVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGV 1146 (1255)
Q Consensus 1067 ~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~ 1146 (1255)
.|.|||+|++++..+++|+.||+||||.+||++|+..|+.||+|+++++|++.|++.+++++||.++|+||||.|||+|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000846 1147 QLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQ 1226 (1255)
Q Consensus 1147 ~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~ 1226 (1255)
.||||||||+||||++|++|+||+||||||+||..||++||.+|++..+|+|+++|||||+||.+||.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHhhhcCchhHHHHhh
Q 000846 1227 GSHNELVALSRGGAYYSLIKP 1247 (1255)
Q Consensus 1227 G~~~eLl~~~~~g~y~~l~~~ 1247 (1255)
|+|+||+++ +|.|++||..
T Consensus 479 g~h~~ll~~--~g~ya~mw~~ 497 (497)
T COG5265 479 GTHEELLAA--GGLYAEMWRR 497 (497)
T ss_pred CcHHHHHHc--CChHHHHhcC
Confidence 999999986 9999999963
No 51
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=3.7e-78 Score=746.31 Aligned_cols=523 Identities=23% Similarity=0.275 Sum_probs=444.3
Q ss_pred HHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHH--HHHHHHHHHHHHHHHHHHH
Q 000846 5 DGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKY--TLRLLYVAIGVGLSAFVEG 82 (1255)
Q Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 82 (1255)
+++++|.+++++. +++.++++++..+.....+++++.++|...... .....+ ...++++.++..++.++..
T Consensus 2 ~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (529)
T TIGR02868 2 LRILPLLQPRTRR-LVVAILLGALALGSAVALLGVSAWLISRAAEMP------PVLYLSVAAVAVRAFGIGRAVFRYLER 74 (529)
T ss_pred hhHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777655443 345555555555555556688899998754211 111111 1112234455677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 83 LCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSF 162 (1255)
Q Consensus 83 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (1255)
++..+.+.++..++|.++|++++++|.+||++ .++|++++|+++|++.+++.+...+..++..+..+++++++++
T Consensus 75 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~-----~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 149 (529)
T TIGR02868 75 LVGHDAALRSLGRLRVRVYDRLARLALAGRRR-----FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIA 149 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcccccc-----CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999996 7788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHH
Q 000846 163 ILSWRLSLAALPLTLMFIVPGLLF-GKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMEL 241 (1255)
Q Consensus 163 ~~~~~l~l~~l~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~ 241 (1255)
+++|.+++++++.+|++.++...+ .+..++..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+.
T Consensus 150 ~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~ 229 (529)
T TIGR02868 150 LLSVPAALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAA 229 (529)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHH
Confidence 999999999988877776655444 4444556667777889999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 242 GIKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFE 320 (1255)
Q Consensus 242 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~ 320 (1255)
..+.....+....+. .+..+..++++|+|++++.+|.+++|.++++..+......|+..+...+..+++++.+.+|+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~ 309 (529)
T TIGR02868 230 ERRAARATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEE 309 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888777766555 4445566677899999999999999999999888888888888888888999999999999999
Q ss_pred HhcCCCCCCCCCcc-cccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC
Q 000846 321 MVDRTPAIDTDDKM-GKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP 399 (1255)
Q Consensus 321 ~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~ 399 (1255)
+++.+++.+..... ....++..+.|+|+||+|+|+++ +++|+|+||+++|||++|||||||||||||+++|+|+|+|
T Consensus 310 ~l~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p 387 (529)
T TIGR02868 310 VTGAKGPRPEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDP 387 (529)
T ss_pred HhcCCCCcCCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 99876542211110 11112234679999999999753 3699999999999999999999999999999999999999
Q ss_pred CccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcC
Q 000846 400 VEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQ 479 (1255)
Q Consensus 400 ~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~ 479 (1255)
++|+|.+||+|++++ .+++|++|+||||+|+||++||+|||.+|.+++++++++++++.+++++++.++|+|+||.+||
T Consensus 388 ~~G~I~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige 466 (529)
T TIGR02868 388 LQGEVTLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGE 466 (529)
T ss_pred CCcEEEECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhcc
Confidence 999999999999999 9999999999999999999999999999998899999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCc
Q 000846 480 LGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRL 542 (1255)
Q Consensus 480 ~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~ 542 (1255)
+|.+||||||||+|||||++++|+|||||||||+||+++++.|++.+++..+++|+|+||||+
T Consensus 467 ~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 467 GGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred ccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999988899999999995
No 52
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=6.6e-77 Score=738.61 Aligned_cols=564 Identities=27% Similarity=0.369 Sum_probs=479.2
Q ss_pred hHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 4 NDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGL 83 (1255)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1255)
++++++|..++++ .+++.++++++..+..+..+++++.++|...... . ...+.+.+++++++..+..++...
T Consensus 7 ~~~l~~~l~~~k~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~ 78 (585)
T TIGR01192 7 YVRALSYLNVHKN-RVLLIVIANITLAAITIAEPILFGRIIDAISSKS------D-VLPTLALWAGFGVFNTIAYVLVAR 78 (585)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------c-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467777765544 4456667777777777777899999999764321 1 111111222223333344444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 84 CWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFI 163 (1255)
Q Consensus 84 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1255)
+..+...++..++|.++|++++++|++||++ .++|++++|+++|++.+.+.+...+...+..++.+++.++++++
T Consensus 79 ~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~-----~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (585)
T TIGR01192 79 EADRLAHGRRATLLTEAFGRIISMPLSWHQQ-----RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFA 153 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566666667779999999999999996 67889999999999999999988888888888888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Q 000846 164 LSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGI 243 (1255)
Q Consensus 164 ~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~ 243 (1255)
++|++++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.+++.+..++..+...
T Consensus 154 ~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~ 233 (585)
T TIGR01192 154 MDWRLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQY 233 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888999998888888888889999999999999999999999999999999999988888777
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000846 244 KQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMV 322 (1255)
Q Consensus 244 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 322 (1255)
+.....++...+. .+..+..++++++|++++.+|.+++|.++++..+......|+..+...+..+..++.+.+|+.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~ 313 (585)
T TIGR01192 234 PVLDWWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLE 313 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766666555444 334455567788999999999999999999988888888899999888999999999999999999
Q ss_pred cCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCcc
Q 000846 323 DRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEG 402 (1255)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 402 (1255)
+.+++.+... .....+...+.|+++||+|+|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|
T Consensus 314 ~~~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G 390 (585)
T TIGR01192 314 DSVFQREEPA-DAPELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVG 390 (585)
T ss_pred cCCccccCCc-cCCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCC
Confidence 8654322111 111112234679999999999742 3589999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCC
Q 000846 403 EVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGF 482 (1255)
Q Consensus 403 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 482 (1255)
+|.+||.++.+++.+++|++++||||+|++|++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|++|.
T Consensus 391 ~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~ 470 (585)
T TIGR01192 391 QILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGN 470 (585)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCC
Confidence 99999999999999999999999999999999999999999988888999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 000846 483 QMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVES 562 (1255)
Q Consensus 483 ~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~ 562 (1255)
+||||||||++|||||+++|++||||||||+||+++++.+.+.|++..+++|+|+||||++++..||+|++|++|++++.
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~ 550 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEK 550 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred cChhHHhccCCCChhHHHHHHHh
Q 000846 563 GSHNELMNRGEGGEYYQMVELQQ 585 (1255)
Q Consensus 563 g~~~~l~~~~~~~~~~~~~~~~~ 585 (1255)
|+|++++++ ++.|+++++.+.
T Consensus 551 g~~~~l~~~--~~~y~~l~~~~~ 571 (585)
T TIGR01192 551 GSFQELIQK--DGRFYKLLRRSG 571 (585)
T ss_pred CCHHHHHHC--CChHHHHHHhCc
Confidence 999999884 689999987653
No 53
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=6.8e-77 Score=743.02 Aligned_cols=564 Identities=28% Similarity=0.386 Sum_probs=475.1
Q ss_pred hHHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 4 NDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGL 83 (1255)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1255)
+++++++..++ +..+.+.++++++..++.+..+++++.++|.+... .......+.+++++++..+..++...
T Consensus 7 ~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (588)
T PRK13657 7 YARVLQYLGAE-KRLGILLAVANVLLAAATFAEPILFGRIIDAISGK-------GDIFPLLAAWAGFGLFNIIAGVLVAR 78 (588)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566665443 33344555555555556666668889999975431 11122222222223333333444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 84 CWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFI 163 (1255)
Q Consensus 84 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1255)
+..+...++..++|.+++++++++|..+|++ .++|++++|+++|++.+.+.+...+..++..++.+++.++++++
T Consensus 79 ~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-----~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (588)
T PRK13657 79 HADRLAHRRRLAVLTEYFERIIQLPLAWHSQ-----RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALF 153 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHCc-----CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555666667779999999999999996 78889999999999999998888888888888888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Q 000846 164 LSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGI 243 (1255)
Q Consensus 164 ~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~ 243 (1255)
++|++++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|++++|.|+.++.+.+++.+..++..+...
T Consensus 154 ~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~ 233 (588)
T PRK13657 154 MNWRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQM 233 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888888888888899999999999999999999999999999999999998888877
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000846 244 KQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMV 322 (1255)
Q Consensus 244 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 322 (1255)
+.....++..... .+..+..++++++|++++.+|.+++|.++++..+......|+..+...+..+..+..+.+|+.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~ 313 (588)
T PRK13657 234 PVLSWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVE 313 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777666555444 344455667788999999999999999999988888888999999998999999999999999999
Q ss_pred cCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCcc
Q 000846 323 DRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEG 402 (1255)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 402 (1255)
+.+++.+... ......+..+.|+++||+|+|+++ +++|+|+||+++|||+++|+|+||||||||+++|+|+|+|++|
T Consensus 314 ~~~~~~~~~~-~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G 390 (588)
T PRK13657 314 DAVPDVRDPP-GAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSG 390 (588)
T ss_pred CCCcccCCCC-CCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCC
Confidence 8654322111 111112234579999999999742 4699999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCC
Q 000846 403 EVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGF 482 (1255)
Q Consensus 403 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 482 (1255)
+|++||+++++++.+.+|++|+||||+|++|++||+|||.++.++.++++++++++.+++++++.++|+|+||.+|++|.
T Consensus 391 ~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~ 470 (588)
T PRK13657 391 RILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGR 470 (588)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 000846 483 QMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVES 562 (1255)
Q Consensus 483 ~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~ 562 (1255)
+||||||||++|||||+++|+|+|||||||+||+++++.+.+.|++..+++|+|+||||++.++.||+|++|++|++++.
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~ 550 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVES 550 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999988789999999999999999999999999999999
Q ss_pred cChhHHhccCCCChhHHHHHHHh
Q 000846 563 GSHNELMNRGEGGEYYQMVELQQ 585 (1255)
Q Consensus 563 g~~~~l~~~~~~~~~~~~~~~~~ 585 (1255)
|+|++++++ .+.|+++++.+.
T Consensus 551 g~~~~l~~~--~~~y~~l~~~~~ 571 (588)
T PRK13657 551 GSFDELVAR--GGRFAALLRAQG 571 (588)
T ss_pred CCHHHHHHC--CChHHHHHHHhh
Confidence 999999974 688999887654
No 54
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3e-77 Score=741.00 Aligned_cols=537 Identities=25% Similarity=0.394 Sum_probs=468.8
Q ss_pred HHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccc
Q 000846 36 MVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQ 115 (1255)
Q Consensus 36 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~ 115 (1255)
.+++++.++|....... .. .....+...++++.++..++.+++.++....+.++..++|.++|++++++|+++|++
T Consensus 14 ~p~~~~~iid~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~- 89 (569)
T PRK10789 14 PPKVVGIIVDGVTEQHM-TT--GQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLR- 89 (569)
T ss_pred HHHHHHHHHHHhccCCc-ch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC-
Confidence 34788889987542210 01 123333344444555666778888888888999999999999999999999999996
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 116 EQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFS-FILSWRLSLAALPLTLMFIVPGLLFGKLMMGVI 194 (1255)
Q Consensus 116 ~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~ 194 (1255)
.++|++++|+++|++.++..+...+..++..++.++++++++ ++++|++++++++++|+++++...+.++..+..
T Consensus 90 ----~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~ 165 (569)
T PRK10789 90 ----HRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERF 165 (569)
T ss_pred ----CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788899999999999999888887878877766666666555 589999999999999999888888999888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 000846 195 MKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYL 273 (1255)
Q Consensus 195 ~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~l 273 (1255)
++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+.....+...... .......++++++|+++
T Consensus 166 ~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l 245 (569)
T PRK10789 166 KLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWM 245 (569)
T ss_pred HHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999988888888777776655544 33444556778899999
Q ss_pred HhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccCCCccceEEEEeEEEE
Q 000846 274 VTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKALSYVRGEIEFRDVYFC 353 (1255)
Q Consensus 274 v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~ 353 (1255)
+.+|.+++|.++++..+......|+..+...+..+..++.+.+|+.++++.+++.+... ...++.++.|+++||+|+
T Consensus 246 v~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~~~ 322 (569)
T PRK10789 246 VVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQFT 322 (569)
T ss_pred HHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEEEE
Confidence 99999999999999999888899999999999999999999999999998765422111 111223467999999999
Q ss_pred cCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccC
Q 000846 354 YPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLF 433 (1255)
Q Consensus 354 y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~ 433 (1255)
|+.. +.++|+|+||+++|||+++|+||||||||||+++|+|+|+|++|+|.+||+++.+++..++|++++||+|+|++|
T Consensus 323 y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf 401 (569)
T PRK10789 323 YPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLF 401 (569)
T ss_pred CCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeec
Confidence 9753 357999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCC
Q 000846 434 ATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSA 513 (1255)
Q Consensus 434 ~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~ 513 (1255)
++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|++|.+||||||||++||||++++|+|||||||||+
T Consensus 402 ~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~ 481 (569)
T PRK10789 402 SDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSA 481 (569)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHHHHHHHhh
Q 000846 514 LDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVELQQM 586 (1255)
Q Consensus 514 lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~ 586 (1255)
||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+|++++++ .+.|+++++.|+.
T Consensus 482 LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~--~~~y~~l~~~~~~ 552 (569)
T PRK10789 482 VDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ--SGWYRDMYRYQQL 552 (569)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc--CChHHHHHHHhhh
Confidence 9999999999999998889999999999999999999999999999999999999974 6889999987654
No 55
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.1e-76 Score=741.90 Aligned_cols=568 Identities=35% Similarity=0.514 Sum_probs=486.4
Q ss_pred HHHHhhhCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 5 DGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLC 84 (1255)
Q Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1255)
+.+++|..+.++ .+.+.+++.++.+++....+++++.++|...... +. .....+..+++++.++..++.+++.++
T Consensus 7 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (576)
T TIGR02204 7 AALWPFVRPYRG-RVLAALVALLITAAATLSLPYAVRLMIDHGFSKD--SS--GLLNRYFAFLLVVALVLALGTAARFYL 81 (576)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc--cH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666544433 3445566666666666667788999998743211 11 122223333344445556677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 85 WTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFIL 164 (1255)
Q Consensus 85 ~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1255)
..+.+.++..++|..+++++++.|.++|+. .++|++++|+++|++.+++.+...+..++.+++.+++++++++++
T Consensus 82 ~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~-----~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (576)
T TIGR02204 82 VTWLGERVVADIRRAVFAHLISLSPSFFDK-----NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFIT 156 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHcc-----CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999986 667899999999999999999998889899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 000846 165 SWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIK 244 (1255)
Q Consensus 165 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 244 (1255)
+|++++++++.+|+.+++..++.+..++..++.++..++..+.+.|.++|+++||+++.|+.+.++|.+..++..+...+
T Consensus 157 ~~~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (576)
T TIGR02204 157 SPKLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQ 236 (576)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888899999999999999999999999999999999999999999999999999888777777
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000846 245 QGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVD 323 (1255)
Q Consensus 245 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~ 323 (1255)
......+..... .+.+...++.+++|++++.+|.+++|.++++..+......|+..+...+..+.+++.+.+|+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~ 316 (576)
T TIGR02204 237 RIRTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQ 316 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 666655544443 3334555677788999999999999999999888888899999999999999999999999999998
Q ss_pred CCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccE
Q 000846 324 RTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGE 403 (1255)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~ 403 (1255)
.+++.+..........+..+.|+++||+|+||.++++++|+|+||+++|||+++|+||||||||||+++|+|+++|++|+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~ 396 (576)
T TIGR02204 317 AEPDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGR 396 (576)
T ss_pred CCCcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCE
Confidence 65442211111111122345799999999998543357999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCC
Q 000846 404 VLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQ 483 (1255)
Q Consensus 404 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 483 (1255)
|++||.++++++.+++|++|+||||+|++|++||+|||.++.++.++++++++++.+++.++++++|+|++|.+|++|.+
T Consensus 397 I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~ 476 (576)
T TIGR02204 397 ILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVT 476 (576)
T ss_pred EEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCc
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEec
Q 000846 484 MSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESG 563 (1255)
Q Consensus 484 LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g 563 (1255)
||||||||++||||++++|+|||||||||+||+++++.+.+.++++.+++|+|+||||++.++.+|+|++|++|++++.|
T Consensus 477 LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g 556 (576)
T TIGR02204 477 LSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQG 556 (576)
T ss_pred CCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeee
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ChhHHhccCCCChhHHHHHHH
Q 000846 564 SHNELMNRGEGGEYYQMVELQ 584 (1255)
Q Consensus 564 ~~~~l~~~~~~~~~~~~~~~~ 584 (1255)
+|++++++ ++.|+++++.|
T Consensus 557 ~~~~l~~~--~~~~~~l~~~~ 575 (576)
T TIGR02204 557 THAELIAK--GGLYARLARLQ 575 (576)
T ss_pred cHHHHHHc--CChHHHHHhhc
Confidence 99999874 68888887644
No 56
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.3e-77 Score=736.81 Aligned_cols=528 Identities=26% Similarity=0.338 Sum_probs=461.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 682 WGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRV 761 (1255)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 761 (1255)
|+.+.++++++++.+++.+..+++++++++....... .......+...+++++++..++.++..+...+.+.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGE--PLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQL 79 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567777788888888899999999987642111 11223334455666677788889999999999999999999
Q ss_pred HHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 762 REKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLV 841 (1255)
Q Consensus 762 r~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~ 841 (1255)
|.++|+++++.|..||+ ++++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.+++++++.+|+.
T Consensus 80 r~~l~~~l~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~ 157 (529)
T TIGR02857 80 RERLLAAVAALGPGWLQ--GRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLI 157 (529)
T ss_pred HHHHHHHHHhCCchhhc--cCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999999998 6889999999999999999999998899998888888899999999999999998888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 000846 842 IGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFF 921 (1255)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (1255)
+...+...+..+...++..+..++....+.|+++|+++||+|+.|+++.++|.+..++..+...+..+.......+..++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (529)
T TIGR02857 158 PIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELF 237 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665555666666666777778888999999999999999999999999999999998888888877777777777777
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCccc
Q 000846 922 NTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDI 1001 (1255)
Q Consensus 922 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~ 1001 (1255)
..+...+++.++++.+..|.+++|.++++..+......++..+...+..+.++..+.+|+.++++.+++..... +.
T Consensus 238 ~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~----~~ 313 (529)
T TIGR02857 238 ATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA----PV 313 (529)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc----CC
Confidence 77776666666777777999999999988888888888999999999999999999999999998543221111 11
Q ss_pred cccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHH
Q 000846 1002 KRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLK 1081 (1255)
Q Consensus 1002 ~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~ 1081 (1255)
+.+..+.|+|+||+|+||++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+
T Consensus 314 ~~~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~ 392 (529)
T TIGR02857 314 TAAPAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADAD 392 (529)
T ss_pred CCCCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHH
Confidence 11123579999999999854 34799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1082 QLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1082 ~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
++|++|+||||||.+|++||||||.++.|+++|++++++++.+++++|++++|+||||.+||+|.+||||||||++||||
T Consensus 393 ~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRa 472 (529)
T TIGR02857 393 SWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARA 472 (529)
T ss_pred HHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEE
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVI 1218 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl 1218 (1255)
++++|+|||||||||+||++||+.|++.+++..+++|+|+||||+++++.||+|+||
T Consensus 473 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 473 FLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999999988899999999999999999999986
No 57
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-77 Score=674.54 Aligned_cols=551 Identities=26% Similarity=0.406 Sum_probs=453.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 22 GTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYL 101 (1255)
Q Consensus 22 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 101 (1255)
.+.+.+.+.......|.+++.++|.........-..+........+.+..++..++..++.+.+.++.+++.++.-.++|
T Consensus 35 ~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf 114 (591)
T KOG0057|consen 35 ALGLLLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVF 114 (591)
T ss_pred HHHHHHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444555556668889998876411111000012223344556667788889999999999999999999999999
Q ss_pred HHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 000846 102 KSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCL-LFSFILSWRLSLAALPLTLMFI 180 (1255)
Q Consensus 102 ~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~l~~~~l~~ 180 (1255)
.+.+.++.++|-. .++|.+.+.+.+-...|...+...+..++..++-+.... .+..-.++..+++.+..+..+.
T Consensus 115 ~~~~~ld~~~~~~-----~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~ 189 (591)
T KOG0057|consen 115 RHLMSLDLSFFLS-----RGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYA 189 (591)
T ss_pred HHHHhhhHHhhcC-----CCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhh
Confidence 9999999999996 778899999999999999888877776666665443333 3333455666666666666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000846 181 VPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSM-GMI 259 (1255)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 259 (1255)
...........+...+..++.+.+.+.+-+.+.|.++||+||.|+.+.++|.....+..+...+.....++....- .+.
T Consensus 190 a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iF 269 (591)
T KOG0057|consen 190 AFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIF 269 (591)
T ss_pred eeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHH
Confidence 5555556666677778888899999999999999999999999999999999999999988888777666554443 233
Q ss_pred HHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccCC
Q 000846 260 YVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKALS 339 (1255)
Q Consensus 260 ~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~ 339 (1255)
.+..+.+.+.|..-+.++.+|.|.++.......++..|+..+...+..+.++..-++-.+...+....+.. ...+..
T Consensus 270 sv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~---~~~~i~ 346 (591)
T KOG0057|consen 270 SVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQE---AALPIE 346 (591)
T ss_pred HHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhh---ccCCcc
Confidence 34445555666666778899999998888788888888888888787777777766666555433221111 112334
Q ss_pred CccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHH
Q 000846 340 YVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWL 419 (1255)
Q Consensus 340 ~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~ 419 (1255)
..++.|+|+||+|+|+. ++++|+++||+|++||++||||+|||||||++++|.||++ ++|+|+|||+|+++++++.+
T Consensus 347 ~~~~~I~F~dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~Sl 423 (591)
T KOG0057|consen 347 LFGGSIEFDDVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESL 423 (591)
T ss_pred cCCCcEEEEeeEEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHh
Confidence 45678999999999973 4579999999999999999999999999999999999999 99999999999999999999
Q ss_pred hcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 420 RSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 420 r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
|+.|||||||..||++||.+||.||++.++++++.++|+.+++||.+.++|+||+|.+||+|..|||||||||+||||++
T Consensus 424 R~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~l 503 (591)
T KOG0057|consen 424 RQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFL 503 (591)
T ss_pred hhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHH
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQ 579 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 579 (1255)
+||+|+++|||||+||.+||+.+.+.+.+...+||+|+|.||+++++.||+|+++++|++.|.|+|+||+. ..+.|.+
T Consensus 504 Kda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~--~s~~~~~ 581 (591)
T KOG0057|consen 504 KDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA--PSELYAD 581 (591)
T ss_pred cCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh--hhhHHHH
Confidence 99999999999999999999999999999888999999999999999999999999999999999999998 4688888
Q ss_pred HHHHHh
Q 000846 580 MVELQQ 585 (1255)
Q Consensus 580 ~~~~~~ 585 (1255)
+|..|.
T Consensus 582 ~w~~~~ 587 (591)
T KOG0057|consen 582 LWTTQT 587 (591)
T ss_pred Hhcccc
Confidence 887654
No 58
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.8e-77 Score=802.51 Aligned_cols=535 Identities=21% Similarity=0.283 Sum_probs=453.3
Q ss_pred HHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccc
Q 000846 34 PLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFD 113 (1255)
Q Consensus 34 p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~ 113 (1255)
.+..++++.+.+........ .....+..++++++++.+++.++..+++.+.+.+.+.++|.+++++++++|++|||
T Consensus 982 ~~~~~~l~~w~~~~~~~~~~----~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~ 1057 (1522)
T TIGR00957 982 LASNYWLSLWTDDPMVNGTQ----NNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFE 1057 (1522)
T ss_pred HHHHHHHHHHhccccccCCC----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhc
Confidence 34446777777642111000 11223334556667777788888888889999999999999999999999999999
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 114 TQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIVPGLLFGKLMMGV 193 (1255)
Q Consensus 114 ~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~ 193 (1255)
+ +++|+++||+++|++.+++.+...+..++..++.+++.++++++.+|++++++++++++++++..++.+..++.
T Consensus 1058 ~-----~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 1132 (1522)
T TIGR00957 1058 R-----TPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQL 1132 (1522)
T ss_pred c-----CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 67779999999999999999999999999999999999999999999887777777777777777777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 194 IMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSMGMIYVGWAFQAWVGSYL 273 (1255)
Q Consensus 194 ~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 273 (1255)
.+...+..+...+.+.|+++|+++||+|++|+.+.+++.+..+...+..........+......++ ...++++.+.+.
T Consensus 1133 ~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 1210 (1522)
T TIGR00957 1133 KRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECV--GNCIVLFAALFA 1210 (1522)
T ss_pred HHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 777777788899999999999999999999999999998888877776655444444433322111 122334445555
Q ss_pred Hh-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC--CCcccccCCCccceEEEEeE
Q 000846 274 VT-EKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDT--DDKMGKALSYVRGEIEFRDV 350 (1255)
Q Consensus 274 v~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~~v 350 (1255)
+. .+.+++|.+.+++.+......++..+...+..++.+++|++|+.++++.+++.+. +....++.|+.+|.|+|+||
T Consensus 1211 v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nV 1290 (1522)
T TIGR00957 1211 VISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNY 1290 (1522)
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEE
Confidence 44 5779999999988888888899999999999999999999999999987655321 11111223456789999999
Q ss_pred EEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCC
Q 000846 351 YFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEP 430 (1255)
Q Consensus 351 ~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~ 430 (1255)
+|+|+.+. .++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|.|||+|+++++.+++|++|++|||||
T Consensus 1291 sf~Y~~~~-~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp 1369 (1522)
T TIGR00957 1291 CLRYREDL-DLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDP 1369 (1522)
T ss_pred EEEeCCCC-cccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCC
Confidence 99997542 46999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCC
Q 000846 431 VLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEA 510 (1255)
Q Consensus 431 ~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEp 510 (1255)
.||+|||||||... .+++++++++|++.+++++++.++|+|+||.+||+|.+||||||||+||||||+++|+|||||||
T Consensus 1370 ~LF~gTIr~NLdp~-~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEa 1448 (1522)
T TIGR00957 1370 VLFSGSLRMNLDPF-SQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEA 1448 (1522)
T ss_pred cccCccHHHHcCcc-cCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 99999999999832 26899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHHHHHH
Q 000846 511 TSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVEL 583 (1255)
Q Consensus 511 ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 583 (1255)
||+||+++++.|++.|++..+++|+|+||||++++.+||||+||++|+|+|.|+|+||+++ ++.|+++++.
T Consensus 1449 TSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~--~~~f~~l~~~ 1519 (1522)
T TIGR00957 1449 TAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ--RGIFYSMAKD 1519 (1522)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC--CCHHHHHHHH
Confidence 9999999999999999999899999999999999999999999999999999999999985 5899999865
No 59
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=6e-76 Score=789.24 Aligned_cols=535 Identities=23% Similarity=0.287 Sum_probs=419.6
Q ss_pred HHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccc
Q 000846 35 LMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDT 114 (1255)
Q Consensus 35 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~ 114 (1255)
+..++++.+.|...... .....+.+++++++++..++.+++.+++.+.+.+...++|.+++++++++|++|||+
T Consensus 933 ~~~~wl~~w~~~~~~~~------~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~ 1006 (1622)
T PLN03130 933 SSSTWLSEWTDQGTPKT------HGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHT 1006 (1622)
T ss_pred HHHHHHHHHHhccccCC------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhcc
Confidence 34467777776432110 122334555666777778888999999999999999999999999999999999997
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 115 QEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIVPGLLFGKLMMGVI 194 (1255)
Q Consensus 115 ~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~ 194 (1255)
+++|+++||+++|++.+++.++..+..++..++.+++.++++++++|...++++++..+++++..++.+..++..
T Consensus 1007 -----~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~ 1081 (1622)
T PLN03130 1007 -----NPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVK 1081 (1622)
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666799999999999999999999999999999888888888888875443333333333333444555555555
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 195 MKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSMGMIYVGWAFQAWVGSYLV 274 (1255)
Q Consensus 195 ~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv 274 (1255)
+......+...+.+.|+++|+++||+|++++++.+++.+..+...+..........+..... ..+...++++.+.+.+
T Consensus 1082 r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l--~~~~~~~i~~~~~~~v 1159 (1622)
T PLN03130 1082 RLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRL--ETLGGLMIWLTASFAV 1159 (1622)
T ss_pred HHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 55566677788999999999999999999987777666655544433222221111111111 1111122222333334
Q ss_pred hhCC-CC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC--CcccccCCCccceEE
Q 000846 275 TEKG-EK-----GGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTD--DKMGKALSYVRGEIE 346 (1255)
Q Consensus 275 ~~~~-~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~--~~~~~~~~~~~~~i~ 346 (1255)
..+. .. .+.+..++.+......++..+...+..++.++.|++|+.++++.+++.+.. .....+.|+.+|.|+
T Consensus 1160 ~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~ 1239 (1622)
T PLN03130 1160 MQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIK 1239 (1622)
T ss_pred HcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEE
Confidence 3332 11 122222223333444445555566677889999999999999876653211 111122345678999
Q ss_pred EEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEe
Q 000846 347 FRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLV 426 (1255)
Q Consensus 347 ~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 426 (1255)
|+||+|+|+++ .+++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|.|||+|+++++.+++|++|++|
T Consensus 1240 f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiV 1318 (1622)
T PLN03130 1240 FEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGII 1318 (1622)
T ss_pred EEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEE
Confidence 99999999643 24799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEE
Q 000846 427 NQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILL 506 (1255)
Q Consensus 427 ~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~ill 506 (1255)
||||.||+|||||||.++. +.+++++++|++.+++++++.++|+|+||.+||+|.+||||||||+||||||+++|+|||
T Consensus 1319 pQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILI 1397 (1622)
T PLN03130 1319 PQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILV 1397 (1622)
T ss_pred CCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999999876 578999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHHHHHHHh
Q 000846 507 LDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVELQQ 585 (1255)
Q Consensus 507 lDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 585 (1255)
||||||+||++|++.|+++|++..+++|+|+||||++++.+||||+||++|+|+|.|+|+||+++ .++.|++|++.+.
T Consensus 1398 LDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~-~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1398 LDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSN-EGSAFSKMVQSTG 1475 (1622)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhC-CCCHHHHHHHHcC
Confidence 99999999999999999999999899999999999999999999999999999999999999985 3589999987644
No 60
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.8e-76 Score=661.43 Aligned_cols=554 Identities=22% Similarity=0.305 Sum_probs=453.4
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 15 DKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTS 94 (1255)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (1255)
.+..++++++++++..+....+..+-|+++..-...+.... -.+.......=++++...+..|...+..+....++..
T Consensus 14 ~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~--f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~AtfrvL~ 91 (573)
T COG4987 14 HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYI--FNVMLPSAGVRGLAILRTAARYVERLVSHDATFRVLS 91 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 34556777777776666555555666777664322111000 0111112223346778888999999999999999999
Q ss_pred HHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 95 RMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALP 174 (1255)
Q Consensus 95 ~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~ 174 (1255)
++|.++|+++...+..-..+ ..+||++||+..|++.+++.+-..+.+.+..+..+.+..+.+-+++|.+++....
T Consensus 92 ~lRv~~f~kl~p~sp~~~~r-----~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~ 166 (573)
T COG4987 92 ALRVRLFEKLEPLSPALLLR-----YRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGL 166 (573)
T ss_pred HHHHHHHHhhccCChHHHHh-----cChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999988886 7888999999999999999999999999998888888888888899998754443
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 175 -LTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLM 253 (1255)
Q Consensus 175 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (1255)
.+.+++++..++.+..++..++..+..+...+.+.|.+.|....+.||.++.+.+.+.+.-..+.+...|...+.++..
T Consensus 167 ~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~ 246 (573)
T COG4987 167 ILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSD 246 (573)
T ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555667777777888888888889999999999999999999999999999999999888888888888888776
Q ss_pred HHHH-HHHHH-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000846 254 GSMG-MIYVG-WAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGAL-PNLTAITEAKVAATRIFEMVDRTPAIDT 330 (1255)
Q Consensus 254 ~~~~-~~~~~-~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (1255)
.+.. +.... ...++|.++ .+-.|..+......+.+.++....++..+. ..+....+...|++|+.++++.+++...
T Consensus 247 a~~~l~~g~~v~~~l~w~a~-~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~ 325 (573)
T COG4987 247 AILLLIAGLLVIGLLLWMAA-QVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTF 325 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCC
Confidence 6652 22222 224556553 233455543333333333333333333333 3456778888999999999998776543
Q ss_pred CCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCee
Q 000846 331 DDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYK 410 (1255)
Q Consensus 331 ~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~ 410 (1255)
+.. +.+... ..++++||+|+||+. ..++|+|+||++++||++||+|+|||||||++++|.|.|+|++|+|+++|.+
T Consensus 326 ~~~--~~~~~~-~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~ 401 (573)
T COG4987 326 PDE--QTATTG-QALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVE 401 (573)
T ss_pred Ccc--ccCCcc-ceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcC
Confidence 211 111111 279999999999965 4679999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHH
Q 000846 411 IRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQ 490 (1255)
Q Consensus 411 ~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrq 490 (1255)
+..++.+.+|+.|++++|.++||++|+|||+.+++|++++|+++++++++++++++...|+|++|.+||.|.+|||||||
T Consensus 402 ~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~r 481 (573)
T COG4987 402 IASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERR 481 (573)
T ss_pred hhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 491 RIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 491 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|+||||+|++|++++||||||.+||+.||+.+.+.|.+..+|||+|+||||+..++.||||+||++|+++|+|+|++|+.
T Consensus 482 RLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 482 RLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred HHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCChhHHHHH
Q 000846 571 RGEGGEYYQMVE 582 (1255)
Q Consensus 571 ~~~~~~~~~~~~ 582 (1255)
+++.|+++++
T Consensus 562 --~~g~~~~l~q 571 (573)
T COG4987 562 --NNGRYKRLYQ 571 (573)
T ss_pred --cccHHHHHhc
Confidence 4788988764
No 61
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.8e-75 Score=722.34 Aligned_cols=524 Identities=23% Similarity=0.288 Sum_probs=453.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 19 MLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRM 98 (1255)
Q Consensus 19 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 98 (1255)
+.++++++++.++..+..++++++++|...... ... ..+..+...+++++++..++.+++.++..+.+.++..++|.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAG-EPL--AELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666677777777799999999763111 111 23334444555666777888999999999999999999999
Q ss_pred HHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 99 EYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLM 178 (1255)
Q Consensus 99 ~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l 178 (1255)
++|++++++|..+|++ .++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++++.+|+
T Consensus 82 ~l~~~l~~~~~~~~~~-----~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l 156 (529)
T TIGR02857 82 RLLAAVAALGPGWLQG-----RPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPL 156 (529)
T ss_pred HHHHHHHhCCchhhcc-----CChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999999999999996 78889999999999999999999888999999889999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 000846 179 FIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSM-G 257 (1255)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 257 (1255)
++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..+......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (529)
T TIGR02857 157 IPIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLEL 236 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887778888888888888888999999999999999999999999999999999998888887777766655544433 2
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccccc
Q 000846 258 MIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKA 337 (1255)
Q Consensus 258 ~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~ 337 (1255)
+..+...+++.++++.+.+|.++.|.++++..+......|+..+...+..+++++.+.+|+.++++.+++.... ...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~---~~~ 313 (529)
T TIGR02857 237 FATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGK---APV 313 (529)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC---cCC
Confidence 22333334444566677789999999999888888888899999889999999999999999999854332111 111
Q ss_pred CCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH
Q 000846 338 LSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK 417 (1255)
Q Consensus 338 ~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~ 417 (1255)
+.+..+.|+++||+|+||+. ++++|+|+||+++|||+++||||||||||||+++|+|+|+|++|+|.+||+|+++++.+
T Consensus 314 ~~~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~ 392 (529)
T TIGR02857 314 TAAPAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADAD 392 (529)
T ss_pred CCCCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHH
Confidence 11123579999999999853 24799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHH
Q 000846 418 WLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARA 497 (1255)
Q Consensus 418 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARa 497 (1255)
++|++++||+|+|++|++||+|||.++.++.++++++++++.++++++++++|+|+||.+||+|.+||||||||++||||
T Consensus 393 ~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRa 472 (529)
T TIGR02857 393 SWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARA 472 (529)
T ss_pred HHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999988889999999999999999999999999999999999999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEE
Q 000846 498 LIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVL 554 (1255)
Q Consensus 498 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl 554 (1255)
++++|+|+|||||||+||+++++.+.+.++++.+++|+|+||||+++++.||+|++|
T Consensus 473 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 473 FLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999999988899999999999999999999985
No 62
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.8e-75 Score=719.85 Aligned_cols=536 Identities=24% Similarity=0.337 Sum_probs=463.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 682 WGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRV 761 (1255)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 761 (1255)
++.+...++++++..++....|+.++.+++....... ......+.+.++++.++..++.+++.++..+.+.++..++
T Consensus 5 k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (544)
T TIGR01842 5 KSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS---VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGAL 81 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666677777777778888899999886642211 1122234445555666777888889999999999999999
Q ss_pred HHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 762 REKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGD-RMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPL 840 (1255)
Q Consensus 762 r~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~-~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl 840 (1255)
|.++|+++++.|+..+ +...+++.+|++.+++.+.. .+..++..++.++. ++++++++|.+++++++.+|+
T Consensus 82 r~~~~~~ll~~~~~~~-------~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l 153 (544)
T TIGR01842 82 NQPIFAASFSATLRRG-------KIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVV 153 (544)
T ss_pred HHHHHHHHhcCcccCc-------cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHH
Confidence 9999999999998432 45688899999999988876 45555555555444 467889999999988887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 000846 841 VIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQF 920 (1255)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (1255)
++...+...+..++..++.++..++....+.|+++|+++||+|+.++.+.++|.+..++..+...+..+..+....+..+
T Consensus 154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (544)
T TIGR01842 154 LVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKY 233 (544)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76655555555566666777778888899999999999999999999999999999999988888888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCcc
Q 000846 921 FNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRD 1000 (1255)
Q Consensus 921 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~ 1000 (1255)
+..+..++++++|++++..|.+|+|.++++..+......++..+...+.++..+..+.+|+.++++.+++.+... +
T Consensus 234 ~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~----~ 309 (544)
T TIGR01842 234 FRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM----P 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC----C
Confidence 888888889999999999999999999999999999999999999999999999999999999998755432111 1
Q ss_pred ccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCH
Q 000846 1001 IKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNL 1080 (1255)
Q Consensus 1001 ~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~ 1080 (1255)
. .+..+.|+++||+|+||+. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.
T Consensus 310 ~-~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~ 387 (544)
T TIGR01842 310 L-PEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDR 387 (544)
T ss_pred C-CCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCH
Confidence 1 1134679999999999743 3579999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
+++|++++||||||++|++|+||||+++++++++++++++++.++++++++++|+|+||.+||+|.+||||||||+||||
T Consensus 388 ~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lAR 467 (544)
T TIGR01842 388 ETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALAR 467 (544)
T ss_pred HHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999887778999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHh
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|++++|+|||||||||+||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||++
T Consensus 468 all~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 468 ALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred HHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999999999999999885 6899999999999999999999999999999999999975
No 63
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.8e-77 Score=688.95 Aligned_cols=485 Identities=27% Similarity=0.446 Sum_probs=368.5
Q ss_pred eEEEEeEEEEcCCCCC-CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCC----ccEEEECCeecCCCCHHH
Q 000846 344 EIEFRDVYFCYPSRPD-TLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPV----EGEVLLDGYKIRRLHLKW 418 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~----~G~i~~~g~~~~~~~~~~ 418 (1255)
-++++|++..|..... ..+++||||++.+||++||||+|||||||+++.|.|+.++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999975432 25999999999999999999999999999999999999987 899999999998888655
Q ss_pred Hh----cccEEeccCCc-cCcc--cHHHHhccCC---CCCCHHHHHHHHHHhchHHHHhc--CCCcccchhcCCCCCCCh
Q 000846 419 LR----SQMGLVNQEPV-LFAT--SITENILFGK---DGASMDDVISAAKAANAHDFITK--LPDGYETQVGQLGFQMSG 486 (1255)
Q Consensus 419 ~r----~~i~~v~Q~~~-l~~~--ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~--l~~g~~t~~~~~g~~LSg 486 (1255)
+| +.|+||+|+|. .+|. ||.+-|.-.. .....++. ...+.+.++. +|+-... .....+|||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea-----~~~a~elL~~Vgl~~~~~~--~~yPheLSG 157 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEA-----RKRAVELLEQVGLPDPERR--DRYPHQLSG 157 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHH-----HHHHHHHHHHcCCCChhhh--ccCCcccCc
Confidence 43 57999999985 4543 6666654210 01111111 1111223332 2322211 457789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000846 487 GQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESG 563 (1255)
Q Consensus 487 Gqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g 563 (1255)
|||||+.||+||..+|++||+||||++||+.++..|.+.|+++. .|.++|+|||++..+.. ||||+||++|+++|.|
T Consensus 158 G~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G 237 (539)
T COG1123 158 GMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETG 237 (539)
T ss_pred hHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEec
Confidence 99999999999999999999999999999999999999999985 48999999999999865 9999999999999999
Q ss_pred ChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCC
Q 000846 564 SHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTP 643 (1255)
Q Consensus 564 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (1255)
+.+++++++...+-..++..- +
T Consensus 238 ~~~~i~~~p~hpYT~~Ll~a~--------------------------------------------p-------------- 259 (539)
T COG1123 238 PTEEILSNPQHPYTRGLLAAV--------------------------------------------P-------------- 259 (539)
T ss_pred CHHHHHhccCCcccHHHHhhC--------------------------------------------C--------------
Confidence 999998753211111110000 0
Q ss_pred CcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 000846 644 YSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKS 723 (1255)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 723 (1255)
T Consensus 260 -------------------------------------------------------------------------------- 259 (539)
T COG1123 260 -------------------------------------------------------------------------------- 259 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHH
Q 000846 724 KSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVG 803 (1255)
Q Consensus 724 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~ 803 (1255)
..+.....
T Consensus 260 ----------------------------------------------------~~~~~~~~-------------------- 267 (539)
T COG1123 260 ----------------------------------------------------RLGDEKII-------------------- 267 (539)
T ss_pred ----------------------------------------------------Cccccccc--------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHh
Q 000846 804 DRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAF 883 (1255)
Q Consensus 804 ~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~ 883 (1255)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Q 000846 884 SSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAE 963 (1255)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1255)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCC--------CCccccceeEEEe
Q 000846 964 AGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRP--------DQMILKGLSLKIE 1035 (1255)
Q Consensus 964 ~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~--------~~~vL~~vs~~I~ 1035 (1255)
..+... + .. ...-++++|++.+|..+. ...+++||||+++
T Consensus 268 ----------------------~~~~~~-~--~~-------~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~ 315 (539)
T COG1123 268 ----------------------RLPRRG-P--LR-------AEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLR 315 (539)
T ss_pred ----------------------cccccc-c--cc-------cCceeEeeeeeeeeccccccccccccceeeeeeeeeEec
Confidence 000000 0 00 011378999999997421 2468999999999
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCee--cCCCCHHHHhcceEEEccCCC--CC-cccHHHHHhcCCC
Q 000846 1036 AGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQD--IRNYNLKQLRSHIALVSQEPT--LF-AGTIRENIAYGKA 1110 (1255)
Q Consensus 1036 ~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~d--i~~i~~~~lR~~i~~V~Qdp~--LF-~gTIreNl~~g~~ 1110 (1255)
+||++||||+||||||||.++|+|+.+|++|+|.++|.| .+.-+...+|+++-+|+|||+ |- ..||+++|.-.-.
T Consensus 316 ~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~ 395 (539)
T COG1123 316 EGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLR 395 (539)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHh
Confidence 999999999999999999999999999999999999977 333335568889999999997 33 4699999953211
Q ss_pred ---CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHH
Q 000846 1111 ---DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSE 1183 (1255)
Q Consensus 1111 ---~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te 1183 (1255)
... .+.+.+.++.+++.. . .......+||||||||+||||||..+|++||+|||||+||+-+.
T Consensus 396 ~~~~~~~~~~~~rv~~ll~~VgL~~-------~---~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvq 465 (539)
T COG1123 396 IHGGGSGAERRARVAELLELVGLPP-------E---FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQ 465 (539)
T ss_pred hhcccchHHHHHHHHHHHHHcCCCH-------H---HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHH
Confidence 111 112333344443321 1 24455678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHhhh
Q 000846 1184 SLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQ 1248 (1255)
Q Consensus 1184 ~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~ 1248 (1255)
+.|.+.|.++.+ |.|.|+|||+++.++. ||||+||++|+|||.|+.+++.+. +...|.+..-..
T Consensus 466 a~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~-p~h~Ytr~L~~a 532 (539)
T COG1123 466 AQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFEN-PQHPYTRKLLAA 532 (539)
T ss_pred HHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcC-CCChHHHHHHHh
Confidence 999999998764 7999999999999987 999999999999999999999886 788888765443
No 64
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.2e-75 Score=780.35 Aligned_cols=515 Identities=23% Similarity=0.305 Sum_probs=414.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 000846 61 DKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAI 140 (1255)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~ 140 (1255)
..+...+++++++..++.+++.+++.+.+.+.+.++|.+++++++++|++|||+ +++|+++||+++|++.+++.+
T Consensus 950 ~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~-----~~~G~ilnr~s~Di~~id~~l 1024 (1495)
T PLN03232 950 GFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHT-----NPTGRVINRFSKDIGDIDRNV 1024 (1495)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCc-----CCchHHHHHhHhhHHHHHHHH
Confidence 345556667777778888999999999999999999999999999999999997 667799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 000846 141 CEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYS 220 (1255)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~ 220 (1255)
...+..++..++.+++.++++++++|...++++++..++.++..++.+..++..+......+...+.+.|+++|+++||+
T Consensus 1025 ~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIra 1104 (1495)
T PLN03232 1025 ANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRA 1104 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhc
Confidence 99888888888888888888877776443333322222223333444445556666667778888999999999999999
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCC-----HHHHHHHHHHHHHH
Q 000846 221 YVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSMGMIYVGWAFQAWVGSYLVTE-KGEK-----GGSIFVAGVSIIMG 294 (1255)
Q Consensus 221 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~-~~~~-----~g~~~~~~~~~~~~ 294 (1255)
|++++.+.+++.+..+...+..........+.... +..+...++++.+.+.+.. +.+. .+.+..++.+....
T Consensus 1105 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 1182 (1495)
T PLN03232 1105 YKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIR--LETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNI 1182 (1495)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHH
Confidence 99999887777666555544333222222211111 1111122222233333332 3221 11222233444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCc--ccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecC
Q 000846 295 GLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTDDK--MGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPA 372 (1255)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~ 372 (1255)
..++..+...+..++.+..|++|+.++++.+++.+.... ...+.++.+|.|+|+||+|+|+.+ .+++|+|+||+|+|
T Consensus 1183 ~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~ 1261 (1495)
T PLN03232 1183 TTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSP 1261 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcC
Confidence 567777888889999999999999999987665332111 112224567889999999999633 24799999999999
Q ss_pred CCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHH
Q 000846 373 GKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDD 452 (1255)
Q Consensus 373 g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~ 452 (1255)
||++|||||||||||||+++|.|+|+|++|+|.|||+|+++++.+++|++|+||||||.||+|||||||.++. ++++++
T Consensus 1262 GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdee 1340 (1495)
T PLN03232 1262 SEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDAD 1340 (1495)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999875 689999
Q ss_pred HHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCC
Q 000846 453 VISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKG 532 (1255)
Q Consensus 453 ~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~ 532 (1255)
+++|++.+++++++.++|+|+||.+||+|.+||||||||+||||||+++|+|||||||||+||+++++.|++.|++..++
T Consensus 1341 i~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~ 1420 (1495)
T PLN03232 1341 LWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKS 1420 (1495)
T ss_pred HHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999899
Q ss_pred CeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHHHHHHHh
Q 000846 533 RTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVELQQ 585 (1255)
Q Consensus 533 ~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 585 (1255)
+|+|+||||++++.+||+|+||++|+|+|.|+|+||+++ .++.|++|++.+.
T Consensus 1421 ~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~-~~~~f~~l~~~~~ 1472 (1495)
T PLN03232 1421 CTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSR-DTSAFFRMVHSTG 1472 (1495)
T ss_pred CEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCCHHHHHHHHhC
Confidence 999999999999999999999999999999999999985 3468999987654
No 65
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.3e-74 Score=711.48 Aligned_cols=532 Identities=23% Similarity=0.306 Sum_probs=450.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 20 LFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRME 99 (1255)
Q Consensus 20 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 99 (1255)
++.++++++..+.....|+++++++|....... . ..+..+...++++.++..++.+++.++..+.+.++..++|.+
T Consensus 9 ~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~--~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 84 (544)
T TIGR01842 9 IIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS--V--PTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQP 84 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--h--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444555888999996542111 1 233334444455556677888899999999999999999999
Q ss_pred HHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 100 YLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMF 179 (1255)
Q Consensus 100 ~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~ 179 (1255)
++++++++|+..+ +...+++++|++.+++.+.......+...+..++.++++++++|++++++++.+|++
T Consensus 85 ~~~~ll~~~~~~~----------~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~ 154 (544)
T TIGR01842 85 IFAASFSATLRRG----------KIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGILALGGAVVL 154 (544)
T ss_pred HHHHHhcCcccCc----------cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999998432 246788999999999988774333333333344455778999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000846 180 IVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSM-GM 258 (1255)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 258 (1255)
+++..++.+..++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+.....+...... .+
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777778888888888899999999999999999999999999999999999999998888877777666655544 33
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccC
Q 000846 259 IYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKAL 338 (1255)
Q Consensus 259 ~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~ 338 (1255)
.....++++++|++++.+|.+|+|.++++..+......|+..+...+..+++++.+.+|+.++++.+++.++. ...
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~~ 310 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MPL 310 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CCC
Confidence 3445566778999999999999999999998888889999999999999999999999999999865542211 111
Q ss_pred CCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH
Q 000846 339 SYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW 418 (1255)
Q Consensus 339 ~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~ 418 (1255)
+..++.|+++||+|+|++. +.++|+|+||+++|||+++|+||||||||||+++|+|+++|++|+|.+||+++.+++.++
T Consensus 311 ~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~ 389 (544)
T TIGR01842 311 PEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRET 389 (544)
T ss_pred CCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHH
Confidence 2234679999999999743 347999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHh
Q 000846 419 LRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARAL 498 (1255)
Q Consensus 419 ~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal 498 (1255)
+|++++||||+|++|++|++|||.++.++.++++++++++.++++++++++|+|++|.+|++|.+||||||||++||||+
T Consensus 390 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARal 469 (544)
T TIGR01842 390 FGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARAL 469 (544)
T ss_pred HhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999987777889999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 499 IRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 499 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+++|++||||||||+||+++++.+.+.|+++. +++|+|+||||++.+..||+|++|++|++++.|+|+++++
T Consensus 470 l~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 470 YGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred hcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999999999999885 6899999999999998999999999999999999999875
No 66
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-75 Score=738.18 Aligned_cols=545 Identities=22% Similarity=0.324 Sum_probs=458.7
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 23 TIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLK 102 (1255)
Q Consensus 23 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~ 102 (1255)
+++.++..+......++++.+.+.-...... . .....+.+.+.+++++..++.+++.+.+...+.+.+++||+++++
T Consensus 823 ~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~--~-~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~ 899 (1381)
T KOG0054|consen 823 LLLFVLTQVLQIASNYWLSYWTDDGEDNGTT--T-VSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLN 899 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccc--C-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444555557778877653211100 0 123455666777788888888899999999999999999999999
Q ss_pred HHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 103 SVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIVP 182 (1255)
Q Consensus 103 ~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~~ 182 (1255)
+++|.||+|||++|. |+|+||+++|++.+++.++..+..++..++.+++.++++.+..|++.++++++..+++..
T Consensus 900 ~Ilrapm~FFdtTP~-----GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~ 974 (1381)
T KOG0054|consen 900 SILRAPMSFFDTTPT-----GRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFV 974 (1381)
T ss_pred HHHhCcchhcCCCCc-----cchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHH
Confidence 999999999998554 599999999999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Q 000846 183 GLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQ---GFIKGLLMGSMGMI 259 (1255)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 259 (1255)
..+|.+..++..+-....++-..+++.|+++|+.|||+|+.|+++.+++....+...+...-. .++.++..-+...
T Consensus 975 ~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~- 1053 (1381)
T KOG0054|consen 975 QRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGN- 1053 (1381)
T ss_pred HHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 888888888887766667777889999999999999999999999999998887766554432 2333333222211
Q ss_pred HHHHHHHHHHHHHHHh-hCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCCccc
Q 000846 260 YVGWAFQAWVGSYLVT-EKG-EKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAID--TDDKMG 335 (1255)
Q Consensus 260 ~~~~~~~~~~g~~lv~-~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~--~~~~~~ 335 (1255)
.+++..+...++ .+. .++|.+-..+.+.+.....+...+.....+...++|+|||.+|.+.++|.+ .+...+
T Consensus 1054 ----~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~p 1129 (1381)
T KOG0054|consen 1054 ----LVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRP 1129 (1381)
T ss_pred ----HHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCC
Confidence 111111112222 222 667888777788888877888888888999999999999999999765511 111113
Q ss_pred ccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCC
Q 000846 336 KALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLH 415 (1255)
Q Consensus 336 ~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~ 415 (1255)
++.||.+|+|+|+|++.+|..+ .++|||||||+|+|||++||||++|||||||+++|.|+.+|.+|+|.|||.|+.++.
T Consensus 1130 p~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~ig 1208 (1381)
T KOG0054|consen 1130 PPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIG 1208 (1381)
T ss_pred CCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeeccccc
Confidence 5568899999999999999643 367999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 416 LKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
+++||++++++||||.||+||||.|+. +.++.+|+++|+|++.+++.+.++++|+|+|+.|.|+|.|+|-||||.+|||
T Consensus 1209 L~dLRsrlsIIPQdPvLFsGTvR~NLD-Pf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLA 1287 (1381)
T KOG0054|consen 1209 LHDLRSRLSIIPQDPVLFSGTVRFNLD-PFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLA 1287 (1381)
T ss_pred HHHHHhcCeeeCCCCceecCccccccC-cccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHH
Confidence 999999999999999999999999997 5567899999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCC
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGG 575 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~ 575 (1255)
|||+++++||+||||||++|++|...||++|++..+++|||.|+||++++.++|||+|||+|+|+|.|+|.+|+++ +++
T Consensus 1288 RALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~-~~S 1366 (1381)
T KOG0054|consen 1288 RALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSD-KDS 1366 (1381)
T ss_pred HHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhC-Ccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987 467
Q ss_pred hhHHHHHH
Q 000846 576 EYYQMVEL 583 (1255)
Q Consensus 576 ~~~~~~~~ 583 (1255)
.|+++...
T Consensus 1367 ~f~~~l~~ 1374 (1381)
T KOG0054|consen 1367 LFSSLLKE 1374 (1381)
T ss_pred hHHHHHHH
Confidence 77655543
No 67
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.3e-74 Score=775.71 Aligned_cols=511 Identities=21% Similarity=0.260 Sum_probs=425.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 66 RLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKIS 145 (1255)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~ 145 (1255)
+++++.++..++.+++.++....+.+...++|.+++++++++|+.|||+ +++|+++||+++|++.+++.+...+.
T Consensus 1003 ~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~-----~~~G~ilnR~s~Di~~id~~l~~~l~ 1077 (1560)
T PTZ00243 1003 VYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT-----TPLGRILNRFSRDIDILDNTLPMSYL 1077 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC-----CCccHHHHHHHhhHHHHHHHHHHHHH
Confidence 3334444444555566666666777888999999999999999999997 56679999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH
Q 000846 146 NTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEH 225 (1255)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~ 225 (1255)
.++..++.+++.++++++.+|.+.+++++++.++..+..++.+..++..+......+...+.+.|+++|+++||+|++|+
T Consensus 1078 ~~~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~ 1157 (1560)
T PTZ00243 1078 YLLQCLFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAH 1157 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHH
Confidence 99999999999999999999866555444444444555666677777777777788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH--HhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 000846 226 ETLIRFSNALQKTMELGIKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYL--VTEKGEKGGSIFVAGVSIIMGGLSVLGAL 302 (1255)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~l--v~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 302 (1255)
.+.++|.+..+...+...+......+..... .+..+...++.+++... ...+.+++|.+..++.+......++..+.
T Consensus 1158 ~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~ 1237 (1560)
T PTZ00243 1158 LVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLV 1237 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888777666544444443332 22222222222333332 23345788877777777777888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCC--------------------------Ccccc---cCCCccceEEEEeEEEE
Q 000846 303 PNLTAITEAKVAATRIFEMVDRTPAIDTD--------------------------DKMGK---ALSYVRGEIEFRDVYFC 353 (1255)
Q Consensus 303 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~~--------------------------~~~~~---~~~~~~~~i~~~~v~~~ 353 (1255)
..+..++.++.|++||.++++..|+++.. ..... +.++..|.|+|+||+|+
T Consensus 1238 ~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~ 1317 (1560)
T PTZ00243 1238 RQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMR 1317 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEE
Confidence 99999999999999999999754322100 00000 11224578999999999
Q ss_pred cCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccC
Q 000846 354 YPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLF 433 (1255)
Q Consensus 354 y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~ 433 (1255)
|+++ .+++|+||||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||||.||
T Consensus 1318 Y~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF 1396 (1560)
T PTZ00243 1318 YREG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLF 1396 (1560)
T ss_pred eCCC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccc
Confidence 9753 346999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC-CCEEEEeCCCC
Q 000846 434 ATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD-PKILLLDEATS 512 (1255)
Q Consensus 434 ~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~-~~illlDEpts 512 (1255)
+|||||||..+ .+++++++++|++.+++++++.++|+|+||.+||+|.+|||||||||||||||+++ |+|||||||||
T Consensus 1397 ~gTIreNIdp~-~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATS 1475 (1560)
T PTZ00243 1397 DGTVRQNVDPF-LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATA 1475 (1560)
T ss_pred cccHHHHhCcc-cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCc
Confidence 99999999865 46889999999999999999999999999999999999999999999999999996 89999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHHHHHHH
Q 000846 513 ALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVELQ 584 (1255)
Q Consensus 513 ~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 584 (1255)
+||+++++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||+++ .++.|+++++.+
T Consensus 1476 aLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~-~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1476 NIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMN-RQSIFHSMVEAL 1546 (1560)
T ss_pred cCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCCHHHHHHHHh
Confidence 99999999999999998889999999999999999999999999999999999999975 368999998765
No 68
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.5e-73 Score=635.77 Aligned_cols=535 Identities=23% Similarity=0.291 Sum_probs=469.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 18 LMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMR 97 (1255)
Q Consensus 18 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 97 (1255)
++.++++.+ +..++....++++-++.|...... +. .++...+.+.++++++.+++.+++.....+.+.++..++.
T Consensus 25 ~~~v~lfS~-~INiL~L~~~lyMLQVyDRVL~S~--s~--~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~ 99 (580)
T COG4618 25 FIGVGLFSA-VINLLALTGPLYMLQVYDRVLPSR--SV--PTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLN 99 (580)
T ss_pred HHHHHHHHH-HHHHHHHhhhHHHHHHHhhhccCC--Cc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334444433 334444445567777888765322 12 4566666677778888899999999999999999999999
Q ss_pred HHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 98 MEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWRLSLAALPLTL 177 (1255)
Q Consensus 98 ~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~ 177 (1255)
..+|.+.++.+..--. .|+=.+- -+|.+.++.+++..-+..+.+..++.++++++|.+++++++++++...
T Consensus 100 ~~v~~a~~~~~l~~~~--------~g~~~Q~-LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~ 170 (580)
T COG4618 100 GPVFAASFSAPLLRRG--------SGDGLQP-LRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAI 170 (580)
T ss_pred cHHHHHHHhhHHhhcC--------CCccccc-hhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999876654321 1221222 279999999999988888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000846 178 MFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSM- 256 (1255)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 256 (1255)
+++.+.++-.+..++..++..+...+++..++-..+|.++|+++|+.....++|.+.+.++.....+.+-..+.+....
T Consensus 171 iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr 250 (580)
T COG4618 171 ILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSR 250 (580)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 8888888888888888888888899999999999999999999999999999999999999888888777777777666
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccc
Q 000846 257 GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTPAIDTDDKMGK 336 (1255)
Q Consensus 257 ~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~ 336 (1255)
.+=......++..|+|++++|++|+|.+++..+.+.....|+.+.+..|..+..++.|++|+.+++...|+..+ .-
T Consensus 251 ~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m 326 (580)
T COG4618 251 ALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE----RM 326 (580)
T ss_pred HHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----CC
Confidence 44455667788899999999999999999999999999999999999999999999999999999987765332 13
Q ss_pred cCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH
Q 000846 337 ALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL 416 (1255)
Q Consensus 337 ~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~ 416 (1255)
+.+.++|.+.++++++.=|+. ++++|+|+||++++||.+|||||||||||||.++|.|.++|.+|.|++||-++++++.
T Consensus 327 ~LP~P~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~ 405 (580)
T COG4618 327 PLPAPQGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDR 405 (580)
T ss_pred CCCCCCceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCH
Confidence 445668999999999976654 5789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
+.+-++|||.||+..||+|||.|||+-..++.+.++|.+|++.+++||.|.++|+||||.+|+.|..|||||||||+|||
T Consensus 406 e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLAR 485 (580)
T COG4618 406 EQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALAR 485 (580)
T ss_pred HHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHH
Confidence 99999999999999999999999998666678899999999999999999999999999999999999999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhcc
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
|||.||.+++||||-|+||.+.|..+.++|...+ +|.|+|+||||++.+..+|+|++|++|++...|+.+|++++
T Consensus 486 AlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 486 ALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred HHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999999999999998885 59999999999999999999999999999999999998874
No 69
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-74 Score=713.09 Aligned_cols=501 Identities=24% Similarity=0.381 Sum_probs=366.9
Q ss_pred eEEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecC----------
Q 000846 344 EIEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIR---------- 412 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~---------- 412 (1255)
.|+++|++++|+... ..++|+||||++++||++|||||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 599999999996321 246999999999999999999999999999999999999999999999997552
Q ss_pred CCCHH---HHh-cccEEeccCC--ccCcc-cHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCccc---chhcC
Q 000846 413 RLHLK---WLR-SQMGLVNQEP--VLFAT-SITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYE---TQVGQ 479 (1255)
Q Consensus 413 ~~~~~---~~r-~~i~~v~Q~~--~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~~ 479 (1255)
+.+.. .+| ++||||+|+| .++.. ||+||+.++.. .....+.. ..+.+.++.+ |+. .....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~ 164 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM-----VEAKRMLDQV--RIPEAQTILSR 164 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChhhHHhC
Confidence 22222 233 5799999998 57764 99999987531 11222211 1223344444 442 34567
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEecCchhhh-hcCEEEEEeC
Q 000846 480 LGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-K-GRTTLIIAHRLSTIR-TANLIMVLKA 556 (1255)
Q Consensus 480 ~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~~~~~~-~~d~i~vl~~ 556 (1255)
...+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|+++. + |+|+|+|||+++.+. .||||++|++
T Consensus 165 ~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~ 244 (623)
T PRK10261 165 YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQ 244 (623)
T ss_pred CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeC
Confidence 778999999999999999999999999999999999999999999999885 3 899999999999985 5999999999
Q ss_pred CEEEEecChhHHhccCCCChhH-HHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCC
Q 000846 557 GKVVESGSHNELMNRGEGGEYY-QMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFS 635 (1255)
Q Consensus 557 G~i~~~g~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (1255)
|++++.|+++++...+. ..|. .+... . +. ... ..
T Consensus 245 G~i~~~g~~~~~~~~~~-~~~~~~l~~~------------------------------~-~~-~~~------~~------ 279 (623)
T PRK10261 245 GEAVETGSVEQIFHAPQ-HPYTRALLAA------------------------------V-PQ-LGA------MK------ 279 (623)
T ss_pred CeecccCCHHHhhcCCC-Chhhhhhhhc------------------------------c-Cc-ccc------cc------
Confidence 99999999888754211 0110 00000 0 00 000 00
Q ss_pred CCCcCCCCCcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000846 636 PALSVGTPYSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFR 715 (1255)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 715 (1255)
.+
T Consensus 280 --------------------------~~---------------------------------------------------- 281 (623)
T PRK10261 280 --------------------------GL---------------------------------------------------- 281 (623)
T ss_pred --------------------------cc----------------------------------------------------
Confidence 00
Q ss_pred CChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhH
Q 000846 716 TDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEA 795 (1255)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~ 795 (1255)
..+ .-+. ...
T Consensus 282 -------------------------------------------------------~~~-~~~~--~~~------------ 291 (623)
T PRK10261 282 -------------------------------------------------------DYP-RRFP--LIS------------ 291 (623)
T ss_pred -------------------------------------------------------cCC-cccc--ccc------------
Confidence 000 0000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000846 796 NVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVI 875 (1255)
Q Consensus 796 ~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~ 875 (1255)
. ..
T Consensus 292 ------------------------------------------------------------~--~~--------------- 294 (623)
T PRK10261 292 ------------------------------------------------------------L--EH--------------- 294 (623)
T ss_pred ------------------------------------------------------------c--cc---------------
Confidence 0 00
Q ss_pred chHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 000846 876 NHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILL 955 (1255)
Q Consensus 876 g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~ 955 (1255)
. .
T Consensus 295 ----------------------------------------------------------------~--~------------ 296 (623)
T PRK10261 295 ----------------------------------------------------------------P--A------------ 296 (623)
T ss_pred ----------------------------------------------------------------c--c------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCC--------CCccc
Q 000846 956 FTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRP--------DQMIL 1027 (1255)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~--------~~~vL 1027 (1255)
...+......... ...-|+++||+++|+.+. ..++|
T Consensus 297 -----------------------------~~~~~~~~~~~~~-------~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l 340 (623)
T PRK10261 297 -----------------------------KQEPPIEQDTVVD-------GEPILQVRNLVTRFPLRSGLLNRVTREVHAV 340 (623)
T ss_pred -----------------------------ccCcccccccccC-------CCceEEEeeeEEEEcCCCccccccCCceEEE
Confidence 0000000000000 011389999999996321 23699
Q ss_pred cceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHH---HHhcceEEEccCC--CCCc-ccH
Q 000846 1028 KGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLK---QLRSHIALVSQEP--TLFA-GTI 1101 (1255)
Q Consensus 1028 ~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR~~i~~V~Qdp--~LF~-gTI 1101 (1255)
+||||+|++||++||||+||||||||+++|.|+.+|++|+|.++|.++...+.. .+|++|+||||+| .++. .|+
T Consensus 341 ~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv 420 (623)
T PRK10261 341 EKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTV 420 (623)
T ss_pred eeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCH
Confidence 999999999999999999999999999999999999999999999999877643 4678899999998 3665 599
Q ss_pred HHHHhcCCC--CC-CH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEecc
Q 000846 1102 RENIAYGKA--DA-RE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEA 1174 (1255)
Q Consensus 1102 reNl~~g~~--~~-~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEa 1174 (1255)
++|+.++.. .. .. +++.+.++..++. +........+||||||||++|||||+.+|+|||||||
T Consensus 421 ~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~----------~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEP 490 (623)
T PRK10261 421 GDSIMEPLRVHGLLPGKAAAARVAWLLERVGLL----------PEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEA 490 (623)
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCC----------HHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 999965310 11 11 2233333333331 0122344567999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhhhcCchhHH-HHh
Q 000846 1175 TSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVALSRGGAYYS-LIK 1246 (1255)
Q Consensus 1175 TSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~-l~~ 1246 (1255)
||+||+.+.+.|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|++.|++++++.. +...|.+ ++.
T Consensus 491 ts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~-p~~~~~~~l~~ 565 (623)
T PRK10261 491 VSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFEN-PQHPYTRKLMA 565 (623)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcC-CCCHHHHHHHh
Confidence 999999999999999998753 7899999999999876 999999999999999999999864 4555654 443
No 70
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.2e-74 Score=625.38 Aligned_cols=491 Identities=30% Similarity=0.450 Sum_probs=416.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 000846 82 GLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFF-FCLLF 160 (1255)
Q Consensus 82 ~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~-~~~~~ 160 (1255)
..++...++...+.+--+.|.|+..+++.|.-+ ..+|.+...+.....-|+..+...+...+..++-+. .+.++
T Consensus 3 ~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~-----r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~ 77 (497)
T COG5265 3 DRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE-----RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVIL 77 (497)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh-----cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 345667788888888889999999999999886 444454444444444444444444444444444333 34445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHH
Q 000846 161 SFILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTME 240 (1255)
Q Consensus 161 ~~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~ 240 (1255)
...++|+.+++.++++.++.++............+...++-+++++...+++-+.++||.|+.|+.+..+|...++.+.+
T Consensus 78 ~~~~~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~ 157 (497)
T COG5265 78 WRVYGWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEK 157 (497)
T ss_pred HhhcccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHH
Confidence 56689999999888888777766655555556666777788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 241 LGIKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIF 319 (1255)
Q Consensus 241 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~ 319 (1255)
...|...-.+++.... .+...........+...+..|.+|.|+++....++.....|+..+......+.+++.-.++.+
T Consensus 158 a~~k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mf 237 (497)
T COG5265 158 AAIKVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMF 237 (497)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHH
Confidence 8888766555544333 223333445555667778889999999999888888889999888888999999999999999
Q ss_pred HHhcCCCCCCCCCcccccCC-CccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC
Q 000846 320 EMVDRTPAIDTDDKMGKALS-YVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD 398 (1255)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~-~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~ 398 (1255)
++++.+.+.... +..++.+ ...|.|.|+||+|.|.. .+++|+++||++++|+++|+|||||+||||++++|.|||+
T Consensus 238 dLl~~~~~v~d~-pda~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD 314 (497)
T COG5265 238 DLLDVEAEVSDA-PDAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYD 314 (497)
T ss_pred HhhccchhhccC-CCCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhC
Confidence 999877654322 1223333 34678999999999964 4689999999999999999999999999999999999999
Q ss_pred CCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhc
Q 000846 399 PVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVG 478 (1255)
Q Consensus 399 ~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~ 478 (1255)
+++|.|.+||+|+++...+.+|+.||+||||..||++|+..||.||+|.++++++..+++.++++++++.+|+||+|.||
T Consensus 315 ~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vg 394 (497)
T COG5265 315 VNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVG 394 (497)
T ss_pred CcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCE
Q 000846 479 QLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGK 558 (1255)
Q Consensus 479 ~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~ 558 (1255)
|+|..|||||||||||||+++++|+||+|||+||+||.+||+.||.+|++..+|+|.++|+|||+++-+||.|+||++|+
T Consensus 395 erglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~ 474 (497)
T COG5265 395 ERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGR 474 (497)
T ss_pred hheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecChhHHhccCCCChhHHHHH
Q 000846 559 VVESGSHNELMNRGEGGEYYQMVE 582 (1255)
Q Consensus 559 i~~~g~~~~l~~~~~~~~~~~~~~ 582 (1255)
|+|.|+|+||+.+ +|.|.+||.
T Consensus 475 i~erg~h~~ll~~--~g~ya~mw~ 496 (497)
T COG5265 475 IVERGTHEELLAA--GGLYAEMWR 496 (497)
T ss_pred EEecCcHHHHHHc--CChHHHHhc
Confidence 9999999999985 799999984
No 71
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-74 Score=701.92 Aligned_cols=462 Identities=22% Similarity=0.399 Sum_probs=360.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC--CccEEEECCeecCCCCHH-HHh
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP--VEGEVLLDGYKIRRLHLK-WLR 420 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~--~~G~i~~~g~~~~~~~~~-~~r 420 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+.. ..|
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 4899999999963 4699999999999999999999999999999999999996 899999999999877654 356
Q ss_pred cccEEeccCCccCcc-cHHHHhccCCCC-----CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHH
Q 000846 421 SQMGLVNQEPVLFAT-SITENILFGKDG-----ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAI 494 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~l 494 (1255)
++++||+|++.+|.. |++||+.++... ...++.. ..+.+.++.+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMY-----LRAQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 789999999988875 999999886431 1112211 1233455555 56555666778999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccC
Q 000846 495 ARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 495 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
||||+.+|++||||||||+||+.++..+.+.|.++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 233 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED- 233 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-
Confidence 999999999999999999999999999999998874 4899999999999986 4999999999999887753332100
Q ss_pred CCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCCC
Q 000846 573 EGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYDP 652 (1255)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (1255)
+..
T Consensus 234 ------~~~----------------------------------------------------------------------- 236 (506)
T PRK13549 234 ------DII----------------------------------------------------------------------- 236 (506)
T ss_pred ------HHH-----------------------------------------------------------------------
Confidence 000
Q ss_pred CCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHH
Q 000846 653 DDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFF 732 (1255)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 732 (1255)
..
T Consensus 237 ----------------------------------------------------------~~-------------------- 238 (506)
T PRK13549 237 ----------------------------------------------------------TM-------------------- 238 (506)
T ss_pred ----------------------------------------------------------HH--------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000846 733 LGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQA 812 (1255)
Q Consensus 733 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~ 812 (1255)
++. . +
T Consensus 239 -------------------------------------------~~~--~-~----------------------------- 243 (506)
T PRK13549 239 -------------------------------------------MVG--R-E----------------------------- 243 (506)
T ss_pred -------------------------------------------hhC--c-C-----------------------------
Confidence 000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHH
Q 000846 813 IFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGL 892 (1255)
Q Consensus 813 ~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~ 892 (1255)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 893 FKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDIS 972 (1255)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1255)
..
T Consensus 244 -------------------------------------------------~~----------------------------- 245 (506)
T PRK13549 244 -------------------------------------------------LT----------------------------- 245 (506)
T ss_pred -------------------------------------------------cc-----------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHH
Q 000846 973 KGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKST 1052 (1255)
Q Consensus 973 ~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKST 1052 (1255)
+ ..+.... +. ...-|+++||+++|+...+.++|+|+||+|++||++||+|+|||||||
T Consensus 246 -------~------~~~~~~~--~~-------~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKST 303 (506)
T PRK13549 246 -------A------LYPREPH--TI-------GEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTE 303 (506)
T ss_pred -------c------ccccccc--CC-------CCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHH
Confidence 0 0000000 00 011389999999995322346999999999999999999999999999
Q ss_pred HHHHHhcccC-CCCceEEECCeecCCCCH-HHHhcceEEEccCC---CCCc-ccHHHHHhcCCC-CC------CHHHHHH
Q 000846 1053 IIGLLERFYD-PLKGSVFMDEQDIRNYNL-KQLRSHIALVSQEP---TLFA-GTIRENIAYGKA-DA------RESEIKK 1119 (1255)
Q Consensus 1053 L~~lL~rl~~-p~~G~I~idG~di~~i~~-~~lR~~i~~V~Qdp---~LF~-gTIreNl~~g~~-~~------~~~ei~~ 1119 (1255)
|+++|+|+++ |++|+|.+||.++...+. +.+|++++||||+| .+|. .|+.||+.++.. .. +.++
T Consensus 304 Llk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~--- 380 (506)
T PRK13549 304 LVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAA--- 380 (506)
T ss_pred HHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHH---
Confidence 9999999999 599999999999875543 45677899999997 3554 699999976521 00 1111
Q ss_pred HHHHhcHHHHHHcccccccc-ccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCC
Q 000846 1120 AAVLANAHEFISGMKDGYDT-YCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGR 1197 (1255)
Q Consensus 1120 al~~a~l~~~i~~lp~gldt-~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~ 1197 (1255)
....+.++++.+ |++. ........||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +|+
T Consensus 381 --~~~~~~~~l~~~--~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~ 456 (506)
T PRK13549 381 --ELKTILESIQRL--KVKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGV 456 (506)
T ss_pred --HHHHHHHHHHhc--CccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCC
Confidence 112234445544 3432 2345567899999999999999999999999999999999999999999999874 589
Q ss_pred eEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1198 TCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1198 TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
|||+|||+++.+.+ ||++++|++|+++..|+++++.
T Consensus 457 tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 457 AIIVISSELPEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred EEEEECCCHHHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 99999999999865 9999999999999999988873
No 72
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.6e-71 Score=686.90 Aligned_cols=535 Identities=16% Similarity=0.171 Sum_probs=440.6
Q ss_pred HHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 670 SQWRLLKINM-PEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHY 748 (1255)
Q Consensus 670 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 748 (1255)
.+++++++.+ +.|+.++++++++++.+......+++++.+++..... .. .....++++.++..++.++..+
T Consensus 4 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~ 75 (555)
T TIGR01194 4 AIGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFL------GQ--GSLFSFGGLCLLALLFRIGADI 75 (555)
T ss_pred hHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc------cc--hHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777 7888888888888888887777777777766421100 00 0111233445566677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 749 SFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSW 828 (1255)
Q Consensus 749 ~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~ 828 (1255)
+....+.++..++|.++|+++++.|++||+ ++++|++++|+++|++.++..+.. +..++..++.+++.++++++++|
T Consensus 76 ~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~--~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 152 (555)
T TIGR01194 76 FPAYAGMHIIANLRIALCEKILGAPIEEID--RRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSV 152 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHH--hcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999998 678999999999999999998864 77777888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHH--HHHHHHHHHHhchHHHHHH
Q 000846 829 RLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQK--RILGLFKETLRGPKEESLK 906 (1255)
Q Consensus 829 ~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~--~~~~~~~~~~~~~~~~~~~ 906 (1255)
.+++++++.+|+.+.......+..++...+.++..++....+.|.+.|++++|+|+.++ ...+++.+..++..+...+
T Consensus 153 ~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (555)
T TIGR01194 153 PMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHII 232 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999888888876666555555555566667777888999999999999999999954 5577888888777777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000846 907 HSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILD 986 (1255)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~ 986 (1255)
..+.......+..++..+..++.++++++. +.+++|.++++..+......++..+...+..++++..+.+|+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~ 309 (555)
T TIGR01194 233 EILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGE 309 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555554444444555555555555665543 78999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCC--CCCCcc----ccccccccEEEEEEEEECCCCC--CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHh
Q 000846 987 RRSEIDPD--SPQGRD----IKRQMRGRIELKNVFFAYPTRP--DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLE 1058 (1255)
Q Consensus 987 ~~~~~~~~--~~~~~~----~~~~~~g~I~~~~Vsf~Y~~~~--~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~ 1058 (1255)
.+.+.+.. .+.... .+....+.|+|+||+|+|++.+ ++++|+|+||+|++||++|||||||||||||+++|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~ 389 (555)
T TIGR01194 310 RFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFC 389 (555)
T ss_pred hhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHh
Confidence 42211110 010000 1111246799999999997532 236999999999999999999999999999999999
Q ss_pred cccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccc
Q 000846 1059 RFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYD 1138 (1255)
Q Consensus 1059 rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gld 1138 (1255)
|+|+|++|+|.+||+|+++++.+++|+++++|+|||++|++|+++|+ .+++++++++++++.+++++++..+|+|||
T Consensus 390 g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~ 466 (555)
T TIGR01194 390 GLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFS 466 (555)
T ss_pred CCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccC
Confidence 99999999999999999999999999999999999999999999996 567889999999999999999999999999
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHH-h-cCCCeEEEEccCchhhhhcCEEE
Q 000846 1139 TYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEK-M-MMGRTCVVVAHRLSTIQKSDTIA 1216 (1255)
Q Consensus 1139 t~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~-~-~~~~TvI~IaHrl~ti~~~D~I~ 1216 (1255)
|. .+||||||||||||||++++|+|||||||||+||++||+.|++.+.+ . .+++|+|+||||++++..||+|+
T Consensus 467 t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~ 541 (555)
T TIGR01194 467 TT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQII 541 (555)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEE
Confidence 94 78999999999999999999999999999999999999999987743 3 46899999999999999999999
Q ss_pred EEeCCEEEEe
Q 000846 1217 VIKNGRVVEQ 1226 (1255)
Q Consensus 1217 Vl~~G~ive~ 1226 (1255)
||++|+++|.
T Consensus 542 ~l~~G~i~~~ 551 (555)
T TIGR01194 542 KLAAGCIVKD 551 (555)
T ss_pred EEECCEEEEe
Confidence 9999999985
No 73
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.6e-73 Score=699.22 Aligned_cols=468 Identities=26% Similarity=0.444 Sum_probs=357.1
Q ss_pred eEEEEeEEEEcCCC-CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCCCCHH
Q 000846 344 EIEFRDVYFCYPSR-PDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRRLHLK 417 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~-~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~~~~ 417 (1255)
.|+++|++++|+.. .+.++|+|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|+++..++..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 124699999999999999999999999999999999999986 799999999999876643
Q ss_pred H---Hh-cccEEeccCCc--cCc-ccHHHHhccCC---CCCCHHHHHHHHHHhchHHHHhcCCCcccc---hhcCCCCCC
Q 000846 418 W---LR-SQMGLVNQEPV--LFA-TSITENILFGK---DGASMDDVISAAKAANAHDFITKLPDGYET---QVGQLGFQM 484 (1255)
Q Consensus 418 ~---~r-~~i~~v~Q~~~--l~~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t---~~~~~g~~L 484 (1255)
. +| +++|||+|+|. ++. .|+++|+.++. ...+.++.. ..+.+.++.+ |++. .......+|
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~~~L 157 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAAR-----GEILNCLDRV--GIRQAAKRLTDYPHQL 157 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChHHHHhhCCccc
Confidence 2 33 57999999985 444 48999986421 111121111 1123334444 4432 245667899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEE
Q 000846 485 SGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVE 561 (1255)
Q Consensus 485 SgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~ 561 (1255)
|||||||++|||||+.+|++||||||||+||+.+.+.+.+.|+++. .|+|+|+|||+++.+. .||+|++|++|++++
T Consensus 158 SgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~ 237 (529)
T PRK15134 158 SGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE 237 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998874 3799999999999986 599999999999999
Q ss_pred ecChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCC
Q 000846 562 SGSHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVG 641 (1255)
Q Consensus 562 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1255)
.|+++++..... .
T Consensus 238 ~g~~~~~~~~~~-------------------------------------~------------------------------ 250 (529)
T PRK15134 238 QNRAATLFSAPT-------------------------------------H------------------------------ 250 (529)
T ss_pred eCCHHHHhhCCC-------------------------------------C------------------------------
Confidence 988776643100 0
Q ss_pred CCCcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhh
Q 000846 642 TPYSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEI 721 (1255)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 721 (1255)
. +. ..+
T Consensus 251 -----------------~----------------------~~---------------------------~~~-------- 256 (529)
T PRK15134 251 -----------------P----------------------YT---------------------------QKL-------- 256 (529)
T ss_pred -----------------H----------------------HH---------------------------HHH--------
Confidence 0 00 000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHH
Q 000846 722 KSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSL 801 (1255)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~ 801 (1255)
+.. . +
T Consensus 257 -------------------------------------------------------~~~-~-~------------------ 261 (529)
T PRK15134 257 -------------------------------------------------------LNS-E-P------------------ 261 (529)
T ss_pred -------------------------------------------------------HHh-C-c------------------
Confidence 000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHH
Q 000846 802 VGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTIT 881 (1255)
Q Consensus 802 ~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr 881 (1255)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q 000846 882 AFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVI 961 (1255)
Q Consensus 882 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1255)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCC--------CCCccccceeEE
Q 000846 962 AEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTR--------PDQMILKGLSLK 1033 (1255)
Q Consensus 962 ~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~--------~~~~vL~~vs~~ 1033 (1255)
+ ..+. ... .. ...-|+++||+++|+.. .+.++|+|+||+
T Consensus 262 ------------------~------~~~~-~~~-~~-------~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~ 308 (529)
T PRK15134 262 ------------------S------GDPV-PLP-EP-------ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFT 308 (529)
T ss_pred ------------------c------cccc-ccC-CC-------CCCcccccCcEEEeecCccccccccccceeeecceeE
Confidence 0 0000 000 00 01138999999999621 124699999999
Q ss_pred EeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH---HhcceEEEccCC--CCCc-ccHHHHHhc
Q 000846 1034 IEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ---LRSHIALVSQEP--TLFA-GTIRENIAY 1107 (1255)
Q Consensus 1034 I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR~~i~~V~Qdp--~LF~-gTIreNl~~ 1107 (1255)
|++||++||+|+||||||||+++|+|+++ ++|+|.+||.++...+... +|++|+||||+| .+|. .|++||+.+
T Consensus 309 i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~ 387 (529)
T PRK15134 309 LRPGETLGLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEE 387 (529)
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHH
Confidence 99999999999999999999999999984 8999999999998766543 478899999998 3665 599999976
Q ss_pred CCC----CCCHHHHHHHHHHhcHHHHHHccccccc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHH
Q 000846 1108 GKA----DARESEIKKAAVLANAHEFISGMKDGYD-TYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVS 1182 (1255)
Q Consensus 1108 g~~----~~~~~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~t 1182 (1255)
+.. ..+..+.. ..+.+++..+ |++ ........+||||||||++|||||+.+|+||||||||++||+.+
T Consensus 388 ~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~ 460 (529)
T PRK15134 388 GLRVHQPTLSAAQRE-----QQVIAVMEEV--GLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTV 460 (529)
T ss_pred HHHhccccCChHHHH-----HHHHHHHHHc--CCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHH
Confidence 421 01111111 1122333332 332 12344567899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1183 ESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1183 e~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 461 ~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 516 (529)
T PRK15134 461 QAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAA 516 (529)
T ss_pred HHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcC
Confidence 9999999998753 7899999999999865 999999999999999999999864
No 74
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1e-70 Score=738.68 Aligned_cols=499 Identities=19% Similarity=0.246 Sum_probs=415.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 72 IGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYL 151 (1255)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~ 151 (1255)
++..++.+++.+++.+.+.+.+.++|.++++++++.|+.||++ .++|+++||+++|++.+++.+...+..++..+
T Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~-----~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~ 1010 (1490)
T TIGR01271 936 DSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT-----MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLT 1010 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566778888899999999999999999999999999997 66679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHH
Q 000846 152 STFFFCLLFSFILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRF 231 (1255)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~ 231 (1255)
+.+++.++++++++|++++++++++++++++..++.+..++..+......+...+.+.|+++|+.+||+|++|+.+.+++
T Consensus 1011 ~~~i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~ 1090 (1490)
T TIGR01271 1011 LIVLGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLF 1090 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHH
Confidence 99999999999999988776665555555566667676676666677777888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-H--HHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 232 SNALQKTMELGIKQGFIKGLLMGSM-G--MIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAI 308 (1255)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (1255)
.+..+...+..........+..... . ......++.++++.. ..+.|.+..++.+......++..++..+..+
T Consensus 1091 ~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~l 1165 (1490)
T TIGR01271 1091 HKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSIDV 1165 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988765444333322222222111 1 111111112222222 2344544444445555666777777788899
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCc----------------ccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecC
Q 000846 309 TEAKVAATRIFEMVDRTPAIDTDDK----------------MGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPA 372 (1255)
Q Consensus 309 ~~~~~a~~ri~~~l~~~~~~~~~~~----------------~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~ 372 (1255)
..++.|++||.++++.+++...... ..++.|+..|.|+|+||+|+|+.. .+++|+|+||+|+|
T Consensus 1166 e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~ 1244 (1490)
T TIGR01271 1166 DGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEG 1244 (1490)
T ss_pred HHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcC
Confidence 9999999999999987654321100 011224567899999999999753 35799999999999
Q ss_pred CCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHH
Q 000846 373 GKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDD 452 (1255)
Q Consensus 373 g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~ 452 (1255)
||++||||+||||||||+++|+|+++ ++|+|.|||+|+++++.+.+|++|+||||+|.||+||||+||... ...++++
T Consensus 1245 GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~-~~~tdee 1322 (1490)
T TIGR01271 1245 GQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPY-EQWSDEE 1322 (1490)
T ss_pred CCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcc-cCCCHHH
Confidence 99999999999999999999999997 799999999999999999999999999999999999999999754 3578999
Q ss_pred HHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCC
Q 000846 453 VISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKG 532 (1255)
Q Consensus 453 ~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~ 532 (1255)
++++++.+++++++.++|+|+||.+||+|.+||||||||+||||||+++|+|||||||||+||+++++.|++.|++..++
T Consensus 1323 i~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~ 1402 (1490)
T TIGR01271 1323 IWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSN 1402 (1490)
T ss_pred HHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999899
Q ss_pred CeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHHHHHHHh
Q 000846 533 RTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVELQQ 585 (1255)
Q Consensus 533 ~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 585 (1255)
+|+|+||||++++..||+|+||++|+|+|.|+|++|++ .++.|+++++.+.
T Consensus 1403 ~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~--~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1403 CTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLN--ETSLFKQAMSAAD 1453 (1490)
T ss_pred CEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHc--CCcHHHHHHHHhC
Confidence 99999999999999999999999999999999999997 4689999987654
No 75
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-73 Score=693.08 Aligned_cols=459 Identities=20% Similarity=0.347 Sum_probs=355.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH-Hhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW-LRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 422 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 4899999999963 35999999999999999999999999999999999999999999999999998777554 4567
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCCC---------CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHH
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDGA---------SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~~---------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri 492 (1255)
++||+|++.++.. |++||+.++.... ..++.. ..+.+.++.+ |+.........+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMR-----VRAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 9999999988876 9999998764210 111111 1233445555 555555667789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+. .||+|++|++|++++.|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999999998874 4899999999999986 599999999999988876554321
Q ss_pred cCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccC
Q 000846 571 RGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQY 650 (1255)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (1255)
. .+.+ .
T Consensus 235 ~-------~~~~----------------------------~--------------------------------------- 240 (510)
T PRK09700 235 D-------DIVR----------------------------L--------------------------------------- 240 (510)
T ss_pred H-------HHHH----------------------------H---------------------------------------
Confidence 0 0000 0
Q ss_pred CCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHH
Q 000846 651 DPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSL 730 (1255)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 730 (1255)
+
T Consensus 241 --------------------------------------------------------------~----------------- 241 (510)
T PRK09700 241 --------------------------------------------------------------M----------------- 241 (510)
T ss_pred --------------------------------------------------------------h-----------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 000846 731 FFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLV 810 (1255)
Q Consensus 731 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~ 810 (1255)
+. .. .
T Consensus 242 ----------------------------------------------~~--~~-~-------------------------- 246 (510)
T PRK09700 242 ----------------------------------------------VG--RE-L-------------------------- 246 (510)
T ss_pred ----------------------------------------------cC--CC-c--------------------------
Confidence 00 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHH
Q 000846 811 QAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRIL 890 (1255)
Q Consensus 811 ~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~ 890 (1255)
..
T Consensus 247 ------------------------------------------~~------------------------------------ 248 (510)
T PRK09700 247 ------------------------------------------QN------------------------------------ 248 (510)
T ss_pred ------------------------------------------cc------------------------------------
Confidence 00
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 891 GLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSD 970 (1255)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 (1255)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK09700 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCH
Q 000846 971 ISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGK 1050 (1255)
Q Consensus 971 ~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGK 1050 (1255)
+ .....+. ..... ....|+++|+++.|. .+|+|+||+|++||++||+|||||||
T Consensus 249 ---------~---~~~~~~~--~~~~~-------~~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGK 302 (510)
T PRK09700 249 ---------R---FNAMKEN--VSNLA-------HETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGR 302 (510)
T ss_pred ---------c---ccccccc--cccCC-------CCcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCH
Confidence 0 0000000 00000 011499999999762 28999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCceEEECCeecCCCCH-HHHhcceEEEccCC---CCCc-ccHHHHHhcCCCC-----------CCH
Q 000846 1051 STIIGLLERFYDPLKGSVFMDEQDIRNYNL-KQLRSHIALVSQEP---TLFA-GTIRENIAYGKAD-----------ARE 1114 (1255)
Q Consensus 1051 STL~~lL~rl~~p~~G~I~idG~di~~i~~-~~lR~~i~~V~Qdp---~LF~-gTIreNl~~g~~~-----------~~~ 1114 (1255)
|||+++|+|+++|++|+|.++|.++...+. ..+|++|+||||++ .+|. -|++||+.++... ...
T Consensus 303 STLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 382 (510)
T PRK09700 303 TELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHE 382 (510)
T ss_pred HHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccCh
Confidence 999999999999999999999999876544 45678999999984 5675 5999999865310 011
Q ss_pred HHHHHHHHHhcHHHHHHccccccc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHh
Q 000846 1115 SEIKKAAVLANAHEFISGMKDGYD-TYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKM 1193 (1255)
Q Consensus 1115 ~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~ 1193 (1255)
.+ ....+.+.++.+ |+. .........||||||||++|||||+++|+|||||||||+||+.+.+.+.+.|++.
T Consensus 383 ~~-----~~~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l 455 (510)
T PRK09700 383 VD-----EQRTAENQRELL--ALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQL 455 (510)
T ss_pred HH-----HHHHHHHHHHhc--CCCCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHH
Confidence 11 111223444433 342 2234455679999999999999999999999999999999999999999999986
Q ss_pred c-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHH
Q 000846 1194 M-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNE 1231 (1255)
Q Consensus 1194 ~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~e 1231 (1255)
. +|+|+|+|||+++.+.. ||+|++|++|++++.+++.+
T Consensus 456 ~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 456 ADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecCcc
Confidence 4 58899999999998864 99999999999999887644
No 76
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.4e-70 Score=676.58 Aligned_cols=533 Identities=17% Similarity=0.188 Sum_probs=435.6
Q ss_pred chHHHHhhhC-chhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHH
Q 000846 3 GNDGLFRYAD-GKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVE 81 (1255)
Q Consensus 3 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (1255)
..++++++++ +++ ..++++++++++.++.....+++++.+++..... . ... ...+++++++.+++.++.
T Consensus 4 ~~~~l~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-----~-~~~---~~~~~~~~~~~~~~~~~~ 73 (555)
T TIGR01194 4 AIGEILALLRSPFP-AITAFSIALGLAGGLAIIALLASINNAIHEENFL-----G-QGS---LFSFGGLCLLALLFRIGA 73 (555)
T ss_pred hHHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-----c-chH---HHHHHHHHHHHHHHHHHH
Confidence 3567888876 544 4455666666666666666667778777632100 0 111 112333455667788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 82 GLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFS 161 (1255)
Q Consensus 82 ~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (1255)
.++.+..+.++..++|.++|++++++|+.||++ .++|++++|+++|++.+++++.. ++.++..++.+++.++++
T Consensus 74 ~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~-----~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l 147 (555)
T TIGR01194 74 DIFPAYAGMHIIANLRIALCEKILGAPIEEIDR-----RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYL 147 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHh-----cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 67789999999999999999864 778888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH--HHHHHHHHHHHHHH
Q 000846 162 FILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEH--ETLIRFSNALQKTM 239 (1255)
Q Consensus 162 ~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~--~~~~~~~~~~~~~~ 239 (1255)
++++|.+++++++++|+.+++..++.++.++...+.++..++.++.+.|.+.|++++|+|+.++ .+.+++.+..++..
T Consensus 148 ~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~ 227 (555)
T TIGR01194 148 AYLSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIA 227 (555)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHH
Confidence 9999999999988888888877777777788888888889999999999999999999999954 55778888888877
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 240 ELGIKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRI 318 (1255)
Q Consensus 240 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri 318 (1255)
+...+.....+...... .+.....++.+++|++. +.++.|.++++..+......|+..+...+..+++++.+++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri 304 (555)
T TIGR01194 228 DLHIIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRL 304 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666555444333322 22233333444555443 688999999999999999999999999999999999999999
Q ss_pred HHHhcCCCC--CCC--CCcccc---cCCCccceEEEEeEEEEcCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHH
Q 000846 319 FEMVDRTPA--IDT--DDKMGK---ALSYVRGEIEFRDVYFCYPSRP--DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTT 389 (1255)
Q Consensus 319 ~~~l~~~~~--~~~--~~~~~~---~~~~~~~~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl 389 (1255)
.++++.+++ ... ...... ++....+.|+++||+|+|++.+ ..++|+|+||++++||++|||||||||||||
T Consensus 305 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl 384 (555)
T TIGR01194 305 ADFGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTL 384 (555)
T ss_pred HHHHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHH
Confidence 999863211 110 000000 1112246799999999997532 2369999999999999999999999999999
Q ss_pred HHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcC
Q 000846 390 IALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKL 469 (1255)
Q Consensus 390 ~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l 469 (1255)
+++|+|+++|++|+|.+||.++++++.+++|++++||+|||++|++|+++|+ .++.++++++++++.+++++++..+
T Consensus 385 ~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~l 461 (555)
T TIGR01194 385 AKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIE 461 (555)
T ss_pred HHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhccc
Confidence 9999999999999999999999999999999999999999999999999995 3567788999999999999999999
Q ss_pred CCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHH-Hh-cCCCeEEEEecCchhhhh
Q 000846 470 PDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAID-KV-SKGRTTLIIAHRLSTIRT 547 (1255)
Q Consensus 470 ~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~-~~-~~~~t~i~itH~~~~~~~ 547 (1255)
|+|++|. .+||||||||++||||++++|+|||||||||+||+++++.+.+.+. .. .+++|+|+||||++++..
T Consensus 462 p~g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~ 536 (555)
T TIGR01194 462 DGGFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFEL 536 (555)
T ss_pred ccccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHh
Confidence 9999994 7899999999999999999999999999999999999999988764 34 468999999999999999
Q ss_pred cCEEEEEeCCEEEEe
Q 000846 548 ANLIMVLKAGKVVES 562 (1255)
Q Consensus 548 ~d~i~vl~~G~i~~~ 562 (1255)
||+|++|++|+++|.
T Consensus 537 ~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 537 ADQIIKLAAGCIVKD 551 (555)
T ss_pred CCEEEEEECCEEEEe
Confidence 999999999999875
No 77
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.9e-72 Score=688.28 Aligned_cols=454 Identities=22% Similarity=0.386 Sum_probs=354.8
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH-Hhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW-LRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 422 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 46999999999999999999999999999999999999999999999999987655433 4678
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCC------CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDG------ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
++||+|++.++.. |++||+.++... ...++.. ..+.+.++.+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMY-----AEADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 9999999988875 999999986421 1111111 1223445554 555555666789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccCC
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRGE 573 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~~ 573 (1255)
|||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-- 231 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED-- 231 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH--
Confidence 99999999999999999999999999999998874 4789999999999986 5999999999999887653332100
Q ss_pred CChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCCCC
Q 000846 574 GGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYDPD 653 (1255)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (1255)
.+. .
T Consensus 232 -----~~~-----------------------------~------------------------------------------ 235 (501)
T PRK10762 232 -----SLI-----------------------------E------------------------------------------ 235 (501)
T ss_pred -----HHH-----------------------------H------------------------------------------
Confidence 000 0
Q ss_pred CCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHH
Q 000846 654 DDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFL 733 (1255)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 733 (1255)
.
T Consensus 236 ----------------------------------------------------------~--------------------- 236 (501)
T PRK10762 236 ----------------------------------------------------------M--------------------- 236 (501)
T ss_pred ----------------------------------------------------------H---------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000846 734 GVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAI 813 (1255)
Q Consensus 734 ~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~ 813 (1255)
++. ..
T Consensus 237 ------------------------------------------~~~--~~------------------------------- 241 (501)
T PRK10762 237 ------------------------------------------MVG--RK------------------------------- 241 (501)
T ss_pred ------------------------------------------hcC--CC-------------------------------
Confidence 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHH
Q 000846 814 FGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLF 893 (1255)
Q Consensus 814 ~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~ 893 (1255)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 894 KETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISK 973 (1255)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1255)
.
T Consensus 242 ------------------------------------------------~------------------------------- 242 (501)
T PRK10762 242 ------------------------------------------------L------------------------------- 242 (501)
T ss_pred ------------------------------------------------c-------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHH
Q 000846 974 GSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTI 1053 (1255)
Q Consensus 974 ~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL 1053 (1255)
. ...+.... +. ..-.|+++|+++ ++|+|+||+|++||++||+|+||||||||
T Consensus 243 --------~---~~~~~~~~--~~-------~~~~l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTL 294 (501)
T PRK10762 243 --------E---DQYPRLDK--AP-------GEVRLKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTEL 294 (501)
T ss_pred --------c---cccccccc--CC-------CCcEEEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHH
Confidence 0 00000000 00 011388999984 26999999999999999999999999999
Q ss_pred HHHHhcccCCCCceEEECCeecCCCCH-HHHhcceEEEccCC---CCC-cccHHHHHhcCCCC--------CCHHHHHHH
Q 000846 1054 IGLLERFYDPLKGSVFMDEQDIRNYNL-KQLRSHIALVSQEP---TLF-AGTIRENIAYGKAD--------ARESEIKKA 1120 (1255)
Q Consensus 1054 ~~lL~rl~~p~~G~I~idG~di~~i~~-~~lR~~i~~V~Qdp---~LF-~gTIreNl~~g~~~--------~~~~ei~~a 1120 (1255)
+++|.|+++|++|+|.+||.++...+. +.+|++|+||||+| .+| ..|++||+.++... .+.++.
T Consensus 295 l~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~--- 371 (501)
T PRK10762 295 MKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADE--- 371 (501)
T ss_pred HHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHH---
Confidence 999999999999999999999987665 34678899999997 355 46999999764210 111111
Q ss_pred HHHhcHHHHHHccccccc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCe
Q 000846 1121 AVLANAHEFISGMKDGYD-TYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRT 1198 (1255)
Q Consensus 1121 l~~a~l~~~i~~lp~gld-t~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~T 1198 (1255)
...+.+++..+ |++ .........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +|+|
T Consensus 372 --~~~~~~~l~~~--~l~~~~~~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~t 447 (501)
T PRK10762 372 --QQAVSDFIRLF--NIKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLS 447 (501)
T ss_pred --HHHHHHHHHhc--CCCCCCccCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCE
Confidence 12233444443 342 23455667899999999999999999999999999999999999999999999875 5889
Q ss_pred EEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1199 CVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1199 vI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
+|+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 448 viivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 448 IILVSSEMPEVLGMSDRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred EEEEcCCHHHHHhhCCEEEEEECCEEEEEeccccCC
Confidence 9999999999865 9999999999999999887763
No 78
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.4e-70 Score=612.03 Aligned_cols=528 Identities=25% Similarity=0.313 Sum_probs=454.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000846 692 SIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMT 771 (1255)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~ 771 (1255)
+.+..++....+.+.-+..|.... +....+...+.++.+++.++..++..++...+.+.+.++...+...+|....+
T Consensus 32 S~~INiL~L~~~lyMLQVyDRVL~---S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~ 108 (580)
T COG4618 32 SAVINLLALTGPLYMLQVYDRVLP---SRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFS 108 (580)
T ss_pred HHHHHHHHHhhhHHHHHHHhhhcc---CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHh
Confidence 333344444444444444444432 22334555666677778888999999999999999999999999999999987
Q ss_pred CCccccccCCCChHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 772 FEIGWFDQEDNTSAAICARLATEANVVRSLVGDR-MSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNV 850 (1255)
Q Consensus 772 ~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~-l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~ 850 (1255)
++.. .+..|+=.+-+ +|.+.++.++... +..++...+ +-+++.++|.+++++.++.++...+++...++-..
T Consensus 109 ~~l~-----~~~~g~~~Q~L-rDL~qvR~Fltg~g~~A~fDaPW-~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~ 181 (580)
T COG4618 109 APLL-----RRGSGDGLQPL-RDLDQVRQFLTGTGLTAFFDAPW-MPLYLAVIFLFHPWLGLIALAGAIILVVLALLNER 181 (580)
T ss_pred hHHh-----hcCCCccccch-hhHHHHHHHHcCCCcchhcCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6654 22333322222 7999999998764 344444443 44556777888888999888888888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 851 LMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAY 930 (1255)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1255)
..++..++..+.....+.+..-+.+|.++|++.|+.....++|.+...++.....+..-..+....++..+-.+.+..++
T Consensus 182 ~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iL 261 (580)
T COG4618 182 ATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVL 261 (580)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777778888899999999999999999999999999999988888888888888888899999999999999
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEE
Q 000846 931 WYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIE 1010 (1255)
Q Consensus 931 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~ 1010 (1255)
..|++|+..|++|.|.+++.-..+.....|+......|..+..+..+.+|+.++++..|+..+.- +.|. .+|.+.
T Consensus 262 g~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m----~LP~-P~g~L~ 336 (580)
T COG4618 262 GLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAERM----PLPA-PQGALS 336 (580)
T ss_pred hcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCC----CCCC-CCceee
Confidence 99999999999999999988888888899999999999999999999999999998776544321 1122 468999
Q ss_pred EEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEE
Q 000846 1011 LKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALV 1090 (1255)
Q Consensus 1011 ~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V 1090 (1255)
++++++.-|+. ++|+|+|+||+++|||-+|||||||||||||.++|.|.++|++|+|++||-|+++.+.+++=++|||.
T Consensus 337 Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYL 415 (580)
T COG4618 337 VERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYL 415 (580)
T ss_pred EeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcC
Confidence 99999977754 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEE
Q 000846 1091 SQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILL 1170 (1255)
Q Consensus 1091 ~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILl 1170 (1255)
|||..||+|||+|||+-.+++.+++.|.+|++.+++||.|.++|+||||.|||+|..|||||||||+||||++.+|++++
T Consensus 416 PQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvV 495 (580)
T COG4618 416 PQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVV 495 (580)
T ss_pred cccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEE
Confidence 99999999999999987777889999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1171 LDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1171 LDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
||||-|+||.+-|+.+.++|.+.+ +|+|+|+||||++.+..+|+|+||++|++..+|+-+|.+++
T Consensus 496 LDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 496 LDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred ecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999999876 69999999999999999999999999999999999999875
No 79
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3.3e-72 Score=689.92 Aligned_cols=456 Identities=24% Similarity=0.460 Sum_probs=349.1
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhccc--CCCccEEEEC---------------
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFY--DPVEGEVLLD--------------- 407 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~--~~~~G~i~~~--------------- 407 (1255)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFDG---KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEECC---eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 478999999963 35999999999999999999999999999999999996 7999999997
Q ss_pred --------CeecC-------CCC---HHHHhcccEEeccC-CccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHH
Q 000846 408 --------GYKIR-------RLH---LKWLRSQMGLVNQE-PVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDF 465 (1255)
Q Consensus 408 --------g~~~~-------~~~---~~~~r~~i~~v~Q~-~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~ 465 (1255)
|.++. ..+ ...+|+.++||+|+ +.+|.. |++||+.++.. ....++.. ..+.+.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~ 152 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDL 152 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHH
Confidence 33221 111 13457789999998 577764 99999987532 11122211 122344
Q ss_pred HhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCch
Q 000846 466 ITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLS 543 (1255)
Q Consensus 466 i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~ 543 (1255)
++.+ |++........+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|+++. .|+|||+|||+++
T Consensus 153 l~~~--gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~ 230 (520)
T TIGR03269 153 IEMV--QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE 230 (520)
T ss_pred HHHc--CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH
Confidence 5555 56555666778999999999999999999999999999999999999999999999873 3899999999999
Q ss_pred hhh-hcCEEEEEeCCEEEEecChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCccc
Q 000846 544 TIR-TANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMR 622 (1255)
Q Consensus 544 ~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (1255)
.+. .||+|++|++|++++.|+++++... + .
T Consensus 231 ~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-----~---------------------------------~----------- 261 (520)
T TIGR03269 231 VIEDLSDKAIWLENGEIKEEGTPDEVVAV-----F---------------------------------M----------- 261 (520)
T ss_pred HHHHhcCEEEEEeCCEEeeecCHHHHHHH-----H---------------------------------H-----------
Confidence 986 5999999999999876654333110 0 0
Q ss_pred CCCCCCCCCCCCCCCCcCCCCCcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHH
Q 000846 623 SSAASTPALNPFSPALSVGTPYSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPIN 702 (1255)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (1255)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCC
Q 000846 703 AYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDN 782 (1255)
Q Consensus 703 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~ 782 (1255)
. .
T Consensus 262 ---------------------------------------------------------------------------~--~- 263 (520)
T TIGR03269 262 ---------------------------------------------------------------------------E--G- 263 (520)
T ss_pred ---------------------------------------------------------------------------h--h-
Confidence 0 0
Q ss_pred ChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 783 TSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKA 862 (1255)
Q Consensus 783 ~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~ 862 (1255)
+ ..
T Consensus 264 ---------------------------------------------~------------------------~~-------- 266 (520)
T TIGR03269 264 ---------------------------------------------V------------------------SE-------- 266 (520)
T ss_pred ---------------------------------------------c------------------------hh--------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 000846 863 QKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELI 942 (1255)
Q Consensus 863 ~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 942 (1255)
T Consensus 267 -------------------------------------------------------------------------------- 266 (520)
T TIGR03269 267 -------------------------------------------------------------------------------- 266 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCC--
Q 000846 943 TPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPT-- 1020 (1255)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~-- 1020 (1255)
. .... .. +. ...-|+++||+++|++
T Consensus 267 ----------------------------~--------------~~~~---~~-~~-------~~~~l~~~~l~~~~~~~~ 293 (520)
T TIGR03269 267 ----------------------------V--------------EKEC---EV-EV-------GEPIIKVRNVSKRYISVD 293 (520)
T ss_pred ----------------------------h--------------cccc---cc-CC-------CCceEEEeccEEEeccCC
Confidence 0 0000 00 00 0114999999999963
Q ss_pred CCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEEC-Ce---ecCCCC---HHHHhcceEEEccC
Q 000846 1021 RPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMD-EQ---DIRNYN---LKQLRSHIALVSQE 1093 (1255)
Q Consensus 1021 ~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~id-G~---di~~i~---~~~lR~~i~~V~Qd 1093 (1255)
+.+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++ |. ++...+ ...+|++|+||||+
T Consensus 294 ~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~ 373 (520)
T TIGR03269 294 RGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQE 373 (520)
T ss_pred CCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccC
Confidence 112469999999999999999999999999999999999999999999996 64 334332 23467789999999
Q ss_pred CCCCc-ccHHHHHhcCCC-CCCHHHHHHHHHHhcHHHHHHcccccccc-----ccCCCCCCCChHHHHHHHHHHHHccCC
Q 000846 1094 PTLFA-GTIRENIAYGKA-DARESEIKKAAVLANAHEFISGMKDGYDT-----YCGERGVQLSGGQKQRIALARAILKNP 1166 (1255)
Q Consensus 1094 p~LF~-gTIreNl~~g~~-~~~~~ei~~al~~a~l~~~i~~lp~gldt-----~vge~G~~LSgGQkQrlalARALlr~p 1166 (1255)
+.+|. .|++||+.++.. ....++. ...+.+++..+ |++. .......+||||||||++|||||+.+|
T Consensus 374 ~~l~~~~tv~e~l~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p 446 (520)
T TIGR03269 374 YDLYPHRTVLDNLTEAIGLELPDELA-----RMKAVITLKMV--GFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEP 446 (520)
T ss_pred cccCCCCcHHHHHHHHHHcCCCHHHH-----HHHHHHHHHhC--CCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 98887 599999975311 1111111 11122333332 2321 234455679999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1167 SILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1167 ~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
+||||||||++||+.+.+.+.+.|++.. .+.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 447 ~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 447 RIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999875 27899999999999875 99999999999999999999865
No 80
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.7e-71 Score=679.87 Aligned_cols=465 Identities=21% Similarity=0.368 Sum_probs=358.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHh-cc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLR-SQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r-~~ 422 (1255)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+....+ ..
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 5999999999963 3599999999999999999999999999999999999999999999999999877665544 57
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
++||+|++.++.. |++||+.++.... .+.. ..+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~--~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~~ 158 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKR--QASM-----QKMKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMRD 158 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccc--hHHH-----HHHHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHcC
Confidence 9999999998876 9999999875321 1111 1123344444 555555666789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccCCCChhHH
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRGEGGEYYQ 579 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 579 (1255)
|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++... .
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-------~ 231 (510)
T PRK15439 159 SRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD-------D 231 (510)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH-------H
Confidence 99999999999999999999999998874 4899999999999985 5999999999999998887765321 0
Q ss_pred HHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCCCCCCCccc
Q 000846 580 MVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYDPDDDSLGD 659 (1255)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1255)
..+... . . . . .. .
T Consensus 232 ~~~~~~--~---~------------------~----~-----------~~-----------------------------~ 244 (510)
T PRK15439 232 IIQAIT--P---A------------------A----R-----------EK-----------------------------S 244 (510)
T ss_pred HHHHHh--C---c------------------c----c-----------cc-----------------------------c
Confidence 000000 0 0 0 0 00 0
Q ss_pred cccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHH
Q 000846 660 RIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLN 739 (1255)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1255)
T Consensus 245 -------------------------------------------------------------------------------- 244 (510)
T PRK15439 245 -------------------------------------------------------------------------------- 244 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 740 FISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFS 819 (1255)
Q Consensus 740 ~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~ 819 (1255)
+ . ..
T Consensus 245 ----------------------------------~---~--~~------------------------------------- 248 (510)
T PRK15439 245 ----------------------------------L---S--AS------------------------------------- 248 (510)
T ss_pred ----------------------------------c---c--cc-------------------------------------
Confidence 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhc
Q 000846 820 YIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRG 899 (1255)
Q Consensus 820 ~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~ 899 (1255)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 900 PKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVR 979 (1255)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 979 (1255)
.
T Consensus 249 -------------------------------------------------------------------------------~ 249 (510)
T PRK15439 249 -------------------------------------------------------------------------------Q 249 (510)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhc
Q 000846 980 SVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLER 1059 (1255)
Q Consensus 980 ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~r 1059 (1255)
+. . ...+.. ....+. .+.-|+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|
T Consensus 250 ~~-~-~~~~~~-~~~~~~-------~~~~l~~~~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G 311 (510)
T PRK15439 250 KL-W-LELPGN-RRQQAA-------GAPVLTVEDLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYG 311 (510)
T ss_pred cc-c-cccccc-ccccCC-------CCceEEEeCCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcC
Confidence 00 0 000000 000000 011389999983 15999999999999999999999999999999999
Q ss_pred ccCCCCceEEECCeecCCCCHHH-HhcceEEEccCC---CCCc-ccHHHHHhcCC----CC-CCHHHHHHHHHHhcHHHH
Q 000846 1060 FYDPLKGSVFMDEQDIRNYNLKQ-LRSHIALVSQEP---TLFA-GTIRENIAYGK----AD-ARESEIKKAAVLANAHEF 1129 (1255)
Q Consensus 1060 l~~p~~G~I~idG~di~~i~~~~-lR~~i~~V~Qdp---~LF~-gTIreNl~~g~----~~-~~~~ei~~al~~a~l~~~ 1129 (1255)
+.+|++|+|.+||.++...+... .|++|+||||++ .+|. .|+.+|+.... +. ....+. ...+.++
T Consensus 312 l~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~ 386 (510)
T PRK15439 312 LRPARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARE-----NAVLERY 386 (510)
T ss_pred CCCCCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHH-----HHHHHHH
Confidence 99999999999999998776654 467899999996 3665 59999985320 10 011111 1123344
Q ss_pred HHccccccc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCch
Q 000846 1130 ISGMKDGYD-TYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLS 1207 (1255)
Q Consensus 1130 i~~lp~gld-t~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ 1207 (1255)
+..+ |++ .........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++
T Consensus 387 l~~~--~l~~~~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~ 464 (510)
T PRK15439 387 RRAL--NIKFNHAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE 464 (510)
T ss_pred HHHc--CCCCCCccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH
Confidence 4443 443 33455567899999999999999999999999999999999999999999999875 4899999999999
Q ss_pred hhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1208 TIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1208 ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
.+.+ ||+|++|++|+++..|+++++..
T Consensus 465 ~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 492 (510)
T PRK15439 465 EIEQMADRVLVMHQGEISGALTGAAINV 492 (510)
T ss_pred HHHHhCCEEEEEECCEEEEEEccccCCH
Confidence 9976 99999999999999999988754
No 81
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=9.2e-72 Score=683.30 Aligned_cols=465 Identities=24% Similarity=0.397 Sum_probs=351.6
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC--CccEEEECCeecCCCCHHH-Hhc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP--VEGEVLLDGYKIRRLHLKW-LRS 421 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~--~~G~i~~~g~~~~~~~~~~-~r~ 421 (1255)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 789999999963 3599999999999999999999999999999999999987 7999999999998776543 467
Q ss_pred ccEEeccCCccCcc-cHHHHhccCCCC------CCHHHHHHHHHHhchHHHHhcCCCcccchh-cCCCCCCChHHHHHHH
Q 000846 422 QMGLVNQEPVLFAT-SITENILFGKDG------ASMDDVISAAKAANAHDFITKLPDGYETQV-GQLGFQMSGGQKQRIA 493 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-~~~g~~LSgGqrqri~ 493 (1255)
+++||+|++.++.. |++||+.++... ...++.. ..+.+.++.+ |++... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLREL--QLDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccCchhhCCHHHHHHHH
Confidence 89999999988875 999999876421 1111211 1233445554 443322 3346789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhcc
Q 000846 494 IARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 494 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|++++....
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 9999999999999999999999999999999998874 48899999999999865 999999999999865532110000
Q ss_pred CCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCC
Q 000846 572 GEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYD 651 (1255)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (1255)
.
T Consensus 232 ---------------------------------------~---------------------------------------- 232 (500)
T TIGR02633 232 ---------------------------------------D---------------------------------------- 232 (500)
T ss_pred ---------------------------------------H----------------------------------------
Confidence 0
Q ss_pred CCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHH
Q 000846 652 PDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLF 731 (1255)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 731 (1255)
.+..
T Consensus 233 ---------------------------------------------------------~~~~------------------- 236 (500)
T TIGR02633 233 ---------------------------------------------------------IITM------------------- 236 (500)
T ss_pred ---------------------------------------------------------HHHH-------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000846 732 FLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQ 811 (1255)
Q Consensus 732 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~ 811 (1255)
++.. .
T Consensus 237 --------------------------------------------~~~~-~------------------------------ 241 (500)
T TIGR02633 237 --------------------------------------------MVGR-E------------------------------ 241 (500)
T ss_pred --------------------------------------------HhCc-c------------------------------
Confidence 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHH
Q 000846 812 AIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILG 891 (1255)
Q Consensus 812 ~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~ 891 (1255)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 892 LFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDI 971 (1255)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1255)
..
T Consensus 242 --------------------------------------------------~~---------------------------- 243 (500)
T TIGR02633 242 --------------------------------------------------IT---------------------------- 243 (500)
T ss_pred --------------------------------------------------cc----------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHH
Q 000846 972 SKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKS 1051 (1255)
Q Consensus 972 ~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKS 1051 (1255)
...+.. .. +. .+.-|+++|++++|+...+.++|+|+||+|++||++||+|+||||||
T Consensus 244 --------------~~~~~~-~~-~~-------~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKS 300 (500)
T TIGR02633 244 --------------SLYPHE-PH-EI-------GDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRT 300 (500)
T ss_pred --------------cccccc-cc-CC-------CCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHH
Confidence 000000 00 00 01148999999999532234699999999999999999999999999
Q ss_pred HHHHHHhcccCC-CCceEEECCeecCCCCH-HHHhcceEEEccCC---CCCc-ccHHHHHhcCCCC-CCH-HHHHHHHHH
Q 000846 1052 TIIGLLERFYDP-LKGSVFMDEQDIRNYNL-KQLRSHIALVSQEP---TLFA-GTIRENIAYGKAD-ARE-SEIKKAAVL 1123 (1255)
Q Consensus 1052 TL~~lL~rl~~p-~~G~I~idG~di~~i~~-~~lR~~i~~V~Qdp---~LF~-gTIreNl~~g~~~-~~~-~ei~~al~~ 1123 (1255)
||+++|+|+++| ++|+|.++|.++...+. ..+|++|+||||++ .+|. .|+++|+.++... ... ..+......
T Consensus 301 TLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~ 380 (500)
T TIGR02633 301 ELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAEL 380 (500)
T ss_pred HHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHH
Confidence 999999999995 89999999999875443 56788999999996 3665 5999999875310 000 000001111
Q ss_pred hcHHHHHHcccccccc-ccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEE
Q 000846 1124 ANAHEFISGMKDGYDT-YCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVV 1201 (1255)
Q Consensus 1124 a~l~~~i~~lp~gldt-~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~ 1201 (1255)
..+.++++.+ |+.. ........||||||||++|||||+++|++|||||||++||+.+.+.+++.|++.. ++.|+|+
T Consensus 381 ~~~~~~l~~~--~l~~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii 458 (500)
T TIGR02633 381 QIIGSAIQRL--KVKTASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIV 458 (500)
T ss_pred HHHHHHHHhc--CccCCCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEE
Confidence 2233444443 3321 2334456799999999999999999999999999999999999999999998874 5789999
Q ss_pred EccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1202 VAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1202 IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
|||+++.+.. ||++++|++|+++..++.+++
T Consensus 459 vsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 459 VSSELAEVLGLSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred ECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 9999999865 999999999999988765443
No 82
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.2e-69 Score=714.89 Aligned_cols=221 Identities=24% Similarity=0.436 Sum_probs=190.6
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcc
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQ 422 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 422 (1255)
..|+++|+++.|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|++
T Consensus 927 ~~L~I~nLsK~y~~~-~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPS-GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecCC-CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 469999999999632 3569999999999999999999999999999999999999999999999999864 45667889
Q ss_pred cEEeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
+|||||++.+|+. ||+|||.++.. ....++.. ..+++.++.+ |++........+||||||||++|||||+
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~-----~~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi 1077 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQ-----LEMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFV 1077 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999999976 99999987421 11222221 1233455555 6666677778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhccC
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
.+|+|+|||||||+||+.+++.+++.|+++++|+|+|++||+++.+.. ||||++|++|++++.|++++|.++.
T Consensus 1078 ~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~ 1151 (2272)
T TIGR01257 1078 GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCF 1151 (2272)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhc
Confidence 999999999999999999999999999998789999999999999864 9999999999999999999997653
No 83
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-71 Score=681.67 Aligned_cols=456 Identities=24% Similarity=0.391 Sum_probs=352.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH-HHHhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL-KWLRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~r~~ 422 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 359999999999999999999999999999999999999999999999999876543 456788
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCC-----CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDG-----ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
|+||+|++.++.. |++||+.++... ....+.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 9999999998876 999999986421 1111111 1233455555 5554456667899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccCCC
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRGEG 574 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~~~ 574 (1255)
||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+. .||+|++|++|++++.++..+...
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~---- 229 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD---- 229 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC----
Confidence 9999999999999999999999999999998874 4899999999999985 499999999999976432100000
Q ss_pred ChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCCCCC
Q 000846 575 GEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYDPDD 654 (1255)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (1255)
.
T Consensus 230 ------------------------------------~------------------------------------------- 230 (501)
T PRK11288 230 ------------------------------------R------------------------------------------- 230 (501)
T ss_pred ------------------------------------H-------------------------------------------
Confidence 0
Q ss_pred CCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHH
Q 000846 655 DSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLG 734 (1255)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1255)
+ . + .
T Consensus 231 ----~---~----------~-----------------------------------~------------------------ 234 (501)
T PRK11288 231 ----D---Q----------L-----------------------------------V------------------------ 234 (501)
T ss_pred ----H---H----------H-----------------------------------H------------------------
Confidence 0 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000846 735 VAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIF 814 (1255)
Q Consensus 735 ~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~ 814 (1255)
+.+ ... .
T Consensus 235 --------------------------------~~~-------~~~-~--------------------------------- 241 (501)
T PRK11288 235 --------------------------------QAM-------VGR-E--------------------------------- 241 (501)
T ss_pred --------------------------------HHh-------cCC-C---------------------------------
Confidence 000 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHH
Q 000846 815 GSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFK 894 (1255)
Q Consensus 815 ~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~ 894 (1255)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 895 ETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKG 974 (1255)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1255)
..
T Consensus 242 -----------------------------------------------~~------------------------------- 243 (501)
T PRK11288 242 -----------------------------------------------IG------------------------------- 243 (501)
T ss_pred -----------------------------------------------cc-------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHH
Q 000846 975 SNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTII 1054 (1255)
Q Consensus 975 ~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~ 1054 (1255)
. .....+. +. .+..++++|++++ .+++|+||+|++||++||+||||||||||+
T Consensus 244 -----~---~~~~~~~-----~~-------~~~~l~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLl 296 (501)
T PRK11288 244 -----D---IYGYRPR-----PL-------GEVRLRLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELM 296 (501)
T ss_pred -----c---ccccccc-----CC-------CCcEEEEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHH
Confidence 0 0000000 00 0114889999842 389999999999999999999999999999
Q ss_pred HHHhcccCCCCceEEECCeecCCCCH-HHHhcceEEEccCCC---CCc-ccHHHHHhcCCCCC--------CHHHHHHHH
Q 000846 1055 GLLERFYDPLKGSVFMDEQDIRNYNL-KQLRSHIALVSQEPT---LFA-GTIRENIAYGKADA--------RESEIKKAA 1121 (1255)
Q Consensus 1055 ~lL~rl~~p~~G~I~idG~di~~i~~-~~lR~~i~~V~Qdp~---LF~-gTIreNl~~g~~~~--------~~~ei~~al 1121 (1255)
++|+|+++|++|+|.+||.++...+. +.+|++++|+||+|. +|. .|+.||+.++.... ...+-
T Consensus 297 k~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~---- 372 (501)
T PRK11288 297 KLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWE---- 372 (501)
T ss_pred HHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHH----
Confidence 99999999999999999999875443 456789999999973 554 79999997653110 11111
Q ss_pred HHhcHHHHHHccccccc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeE
Q 000846 1122 VLANAHEFISGMKDGYD-TYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTC 1199 (1255)
Q Consensus 1122 ~~a~l~~~i~~lp~gld-t~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~Tv 1199 (1255)
...+.+++..+ |++ ........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. .|.|+
T Consensus 373 -~~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tv 449 (501)
T PRK11288 373 -AENADRFIRSL--NIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAV 449 (501)
T ss_pred -HHHHHHHHHhc--CcccCCccCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEE
Confidence 11223444443 332 22344456899999999999999999999999999999999999999999998875 48899
Q ss_pred EEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1200 VVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1200 I~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
|+|||+++.+.. ||++++|++|++++.|+++|..
T Consensus 450 iivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 450 LFVSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred EEECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 999999999865 9999999999999999988764
No 84
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-71 Score=600.46 Aligned_cols=471 Identities=28% Similarity=0.461 Sum_probs=365.9
Q ss_pred eEEEEeEEEEcCC-CCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCCCCHH
Q 000846 344 EIEFRDVYFCYPS-RPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRRLHLK 417 (1255)
Q Consensus 344 ~i~~~~v~~~y~~-~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~~~~ 417 (1255)
-++++|++..|.. .....++++|||+|++||++||||+||||||-..+.++|+++- -+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 4788999988852 2346799999999999999999999999999999999999864 478999999999888877
Q ss_pred HHhc----ccEEeccCCc--cCcc-cHHHHh----ccCCC---CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCC
Q 000846 418 WLRS----QMGLVNQEPV--LFAT-SITENI----LFGKD---GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQ 483 (1255)
Q Consensus 418 ~~r~----~i~~v~Q~~~--l~~~-ti~~ni----~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 483 (1255)
.+|. +|++++|||- |-+- ||...| .+-.. .+..+++.+.++.+++.+- .-.+.....+
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhCCcc
Confidence 7764 7999999994 3332 555444 32111 1122334444444443221 2334556679
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEE
Q 000846 484 MSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVV 560 (1255)
Q Consensus 484 LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~ 560 (1255)
|||||||||.||-||..+|++||-||||.|||...+..|.+.|+++.+ |..+++|||++..++. ||||+||.+|+++
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 999999999999999999999999999999999999999999999854 8999999999999975 9999999999999
Q ss_pred EecChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcC
Q 000846 561 ESGSHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSV 640 (1255)
Q Consensus 561 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (1255)
|+|+.+++...+.. .|.+..-.
T Consensus 238 E~~~t~~lF~~PqH-pYTr~Ll~--------------------------------------------------------- 259 (534)
T COG4172 238 ETGTTETLFAAPQH-PYTRKLLA--------------------------------------------------------- 259 (534)
T ss_pred ecCcHHHHhhCCCC-hHHHHHHh---------------------------------------------------------
Confidence 99998888765321 22111100
Q ss_pred CCCCcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhh
Q 000846 641 GTPYSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSE 720 (1255)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 720 (1255)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHH
Q 000846 721 IKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRS 800 (1255)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~ 800 (1255)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHH
Q 000846 801 LVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTI 880 (1255)
Q Consensus 801 ~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tI 880 (1255)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q 000846 881 TAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYV 960 (1255)
Q Consensus 881 ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1255)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCC--------CCccccceeE
Q 000846 961 IAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRP--------DQMILKGLSL 1032 (1255)
Q Consensus 961 ~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~--------~~~vL~~vs~ 1032 (1255)
.+|.-.+. +.+....--++.+||...||-+. ...+.++|||
T Consensus 260 --------------------------aeP~g~~~-----p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl 308 (534)
T COG4172 260 --------------------------AEPSGDPP-----PLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISL 308 (534)
T ss_pred --------------------------cCCCCCCC-----CCCCCCCceEEecceEEEEecCCccccccchheEEecccee
Confidence 00000000 00000111245555555554221 1248999999
Q ss_pred EEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH---HhcceEEEccCCC--CC-cccHHHHHh
Q 000846 1033 KIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ---LRSHIALVSQEPT--LF-AGTIRENIA 1106 (1255)
Q Consensus 1033 ~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR~~i~~V~Qdp~--LF-~gTIreNl~ 1106 (1255)
++++||++||||.||||||||-.+|+|+.+++ |+|.++|.||..++.+. +|+++-+|+|||+ |= ..||.+-|.
T Consensus 309 ~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~ 387 (534)
T COG4172 309 TLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIE 387 (534)
T ss_pred EecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhh
Confidence 99999999999999999999999999999876 99999999999988765 6899999999997 32 247766664
Q ss_pred cC----CCCCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCC
Q 000846 1107 YG----KADAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSAL 1178 (1255)
Q Consensus 1107 ~g----~~~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaL 1178 (1255)
=| .|..+ ++.+.+|++.+|++.-.. ..-...+|||||||||||||++-+|++++||||||+|
T Consensus 388 EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r----------~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSAL 457 (534)
T COG4172 388 EGLRVHEPKLSAAERDQRVIEALEEVGLDPATR----------NRYPHEFSGGQRQRIAIARALILKPELILLDEPTSAL 457 (534)
T ss_pred hhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHh----------hcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHh
Confidence 33 33333 456777887777654322 2235679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhhhcCchhHH
Q 000846 1179 DSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVALSRGGAYYS 1243 (1255)
Q Consensus 1179 D~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~ 1243 (1255)
|..-.+.|.+.++++- .+-+-++|+|+|..++. ||+|+||.+|+|||+|+-++++++ +...|.+
T Consensus 458 D~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~-P~~~YT~ 524 (534)
T COG4172 458 DRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFAN-PQHEYTR 524 (534)
T ss_pred hHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcC-CCcHHHH
Confidence 9999999999999875 46799999999999976 999999999999999999999986 7777765
No 85
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-71 Score=673.05 Aligned_cols=453 Identities=22% Similarity=0.339 Sum_probs=349.8
Q ss_pred EEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH-HHHhcccEE
Q 000846 347 FRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL-KWLRSQMGL 425 (1255)
Q Consensus 347 ~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~r~~i~~ 425 (1255)
++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..++++++|
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 3689999963 359999999999999999999999999999999999999999999999999876654 446778999
Q ss_pred eccCCccCcc-cHHHHhccCCCCC-----CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 426 VNQEPVLFAT-SITENILFGKDGA-----SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 426 v~Q~~~l~~~-ti~~ni~~~~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
|+|++.++.. |++||+.++.... ..++.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMY-----RDTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 9999987765 9999998764211 111111 1234455555 6665666778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccCCCChh
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRGEGGEY 577 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~ 577 (1255)
.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~------ 224 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD------ 224 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH------
Confidence 9999999999999999999999999998874 4899999999999985 5999999999999987754332100
Q ss_pred HHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCCCCCCCc
Q 000846 578 YQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYDPDDDSL 657 (1255)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (1255)
...
T Consensus 225 -~~~---------------------------------------------------------------------------- 227 (491)
T PRK10982 225 -KII---------------------------------------------------------------------------- 227 (491)
T ss_pred -HHH----------------------------------------------------------------------------
Confidence 000
Q ss_pred cccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHH
Q 000846 658 GDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAV 737 (1255)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (1255)
.
T Consensus 228 -----------------------------------------------------~-------------------------- 228 (491)
T PRK10982 228 -----------------------------------------------------A-------------------------- 228 (491)
T ss_pred -----------------------------------------------------H--------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 738 LNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSV 817 (1255)
Q Consensus 738 ~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i 817 (1255)
.+ +.. .
T Consensus 229 ------------------------------~~-------~~~-~------------------------------------ 234 (491)
T PRK10982 229 ------------------------------MM-------VGR-S------------------------------------ 234 (491)
T ss_pred ------------------------------HH-------hCC-C------------------------------------
Confidence 00 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHH
Q 000846 818 FSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETL 897 (1255)
Q Consensus 818 ~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~ 897 (1255)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 898 RGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNA 977 (1255)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 977 (1255)
.
T Consensus 235 --------------------------------------------~----------------------------------- 235 (491)
T PRK10982 235 --------------------------------------------L----------------------------------- 235 (491)
T ss_pred --------------------------------------------c-----------------------------------
Confidence 0
Q ss_pred HHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHH
Q 000846 978 VRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLL 1057 (1255)
Q Consensus 978 ~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL 1057 (1255)
.. ..++. . .+. .+..|+++|++++| +++|+|+||+|++||++||+|+||||||||+++|
T Consensus 236 -~~-----~~~~~--~-~~~-------~~~~i~~~~l~~~~-----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l 294 (491)
T PRK10982 236 -TQ-----RFPDK--E-NKP-------GEVILEVRNLTSLR-----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETL 294 (491)
T ss_pred -cc-----ccccc--c-CCC-------CCcEEEEeCccccc-----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHH
Confidence 00 00000 0 000 01148999999975 2489999999999999999999999999999999
Q ss_pred hcccCCCCceEEECCeecCCCCHH-HHhcceEEEccCCC---CCc-ccHHHH-----HhcCCC--C-CCHHHHHHHHHHh
Q 000846 1058 ERFYDPLKGSVFMDEQDIRNYNLK-QLRSHIALVSQEPT---LFA-GTIREN-----IAYGKA--D-ARESEIKKAAVLA 1124 (1255)
Q Consensus 1058 ~rl~~p~~G~I~idG~di~~i~~~-~lR~~i~~V~Qdp~---LF~-gTIreN-----l~~g~~--~-~~~~ei~~al~~a 1124 (1255)
+|+.+|++|+|.+||.++...+.. .+|+.++|+||++. +|. .|+.+| +.+... . .+..+.. .
T Consensus 295 ~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 369 (491)
T PRK10982 295 FGIREKSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK-----S 369 (491)
T ss_pred cCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH-----H
Confidence 999999999999999999876654 45788999999963 565 477766 322111 0 1111111 1
Q ss_pred cHHHHHHccccccc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEE
Q 000846 1125 NAHEFISGMKDGYD-TYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVV 1202 (1255)
Q Consensus 1125 ~l~~~i~~lp~gld-t~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~I 1202 (1255)
.+.+++..+ |+. -.......+||||||||++||||++.+|+||||||||++||+.+.+.+.+.|+++. .++|+|+|
T Consensus 370 ~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~v 447 (491)
T PRK10982 370 DTQWVIDSM--RVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIII 447 (491)
T ss_pred HHHHHHHhc--CccCCCcccccccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEE
Confidence 223344443 232 12345567899999999999999999999999999999999999999999998864 58999999
Q ss_pred ccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1203 AHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1203 aHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||+++.+.. |||+++|++|+++..++.+++
T Consensus 448 sHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 478 (491)
T PRK10982 448 SSEMPELLGITDRILVMSNGLVAGIVDTKTT 478 (491)
T ss_pred CCChHHHHhhCCEEEEEECCEEEEEEccccC
Confidence 999999865 999999999999988876543
No 86
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=7.7e-69 Score=714.12 Aligned_cols=212 Identities=24% Similarity=0.404 Sum_probs=180.7
Q ss_pred cEEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC---CCCceEEECCeecCCCCHHHH
Q 000846 1008 RIELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD---PLKGSVFMDEQDIRNYNLKQL 1083 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~l 1083 (1255)
.++++||+++|+.++ ++++|+|||++|+|||++||+||||||||||+++|.|+.+ |++|+|.+||.++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 379999999996322 3579999999999999999999999999999999999998 78899999999985 257
Q ss_pred hcceEEEccCCC-CCcccHHHHHhcCC----C-CCCHHH----HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1084 RSHIALVSQEPT-LFAGTIRENIAYGK----A-DARESE----IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1084 R~~i~~V~Qdp~-LF~gTIreNl~~g~----~-~~~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
|++++||||++. ++..|+||||.++. | +.++++ +.++++..+ +.+..|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~-------L~~~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLE-------MESYADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcC-------ChhhCCCeeCCCCCCCCHHHh
Confidence 899999999976 55679999998742 2 223333 333344333 344578999998889999999
Q ss_pred HHHHHHHHHccCCC-EEEEeccCCCCCHHHHHHHHHHHHHh-cCCCeEEEEccCchhh--hhcCEEEEEeCC-EEEEecC
Q 000846 1154 QRIALARAILKNPS-ILLLDEATSALDSVSESLVQEALEKM-MMGRTCVVVAHRLSTI--QKSDTIAVIKNG-RVVEQGS 1228 (1255)
Q Consensus 1154 QrlalARALlr~p~-ILlLDEaTSaLD~~te~~I~~~l~~~-~~~~TvI~IaHrl~ti--~~~D~I~Vl~~G-~ive~G~ 1228 (1255)
||++|||||+++|+ ||+||||||+||+.+...|++.|++. .+|+|||+++|+++.. ..+|++++|++| ++++.|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 99999999999999999999999997 4689999999999974 579999999997 9999999
Q ss_pred HH
Q 000846 1229 HN 1230 (1255)
Q Consensus 1229 ~~ 1230 (1255)
+.
T Consensus 988 ~~ 989 (1394)
T TIGR00956 988 LG 989 (1394)
T ss_pred cc
Confidence 74
No 87
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=8.5e-70 Score=664.28 Aligned_cols=452 Identities=22% Similarity=0.293 Sum_probs=343.7
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 3899999999963 3599999999999999999999999999999999999999999999999888766666677789
Q ss_pred EEeccCCcc--C-------cccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHH
Q 000846 424 GLVNQEPVL--F-------ATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAI 494 (1255)
Q Consensus 424 ~~v~Q~~~l--~-------~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~l 494 (1255)
+|++|++.+ + ..|+++|+.++. ...+++. +.++.+ |++........+||||||||++|
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---------~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 146 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEV--KDPARCE---------QLAQQF--GITALLDRRFKYLSTGETRKTLL 146 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccch--hHHHHHH---------HHHHHc--CCHhhhhCCcccCCHHHHHHHHH
Confidence 999998753 2 348899886531 1112233 333333 45444556667999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhccC
Q 000846 495 ARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 495 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
||||+.+|++|||||||++||+++.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|+++..|+++++....
T Consensus 147 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 226 (490)
T PRK10938 147 CQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA 226 (490)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch
Confidence 999999999999999999999999999999998874 47899999999999865 9999999999999988877654310
Q ss_pred CCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCCC
Q 000846 573 EGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYDP 652 (1255)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (1255)
....+.. . .
T Consensus 227 ---~~~~~~~----------------------------~----~------------------------------------ 235 (490)
T PRK10938 227 ---LVAQLAH----------------------------S----E------------------------------------ 235 (490)
T ss_pred ---hhhhhhh----------------------------h----h------------------------------------
Confidence 0000000 0 0
Q ss_pred CCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHH
Q 000846 653 DDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFF 732 (1255)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 732 (1255)
T Consensus 236 -------------------------------------------------------------------------------- 235 (490)
T PRK10938 236 -------------------------------------------------------------------------------- 235 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000846 733 LGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQA 812 (1255)
Q Consensus 733 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~ 812 (1255)
+ .... ..+.
T Consensus 236 -----------------------------------~-------~~~~-~~~~---------------------------- 244 (490)
T PRK10938 236 -----------------------------------Q-------LEGV-QLPE---------------------------- 244 (490)
T ss_pred -----------------------------------c-------cCcc-ccCc----------------------------
Confidence 0 0000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHH
Q 000846 813 IFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGL 892 (1255)
Q Consensus 813 ~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~ 892 (1255)
T Consensus 245 -------------------------------------------------------------------------------- 244 (490)
T PRK10938 245 -------------------------------------------------------------------------------- 244 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 893 FKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDIS 972 (1255)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1255)
T Consensus 245 -------------------------------------------------------------------------------- 244 (490)
T PRK10938 245 -------------------------------------------------------------------------------- 244 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHH
Q 000846 973 KGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKST 1052 (1255)
Q Consensus 973 ~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKST 1052 (1255)
..++........ ....|+++|++++|++ .++|+|+||+|++||++||+|||||||||
T Consensus 245 -------------~~~~~~~~~~~~-------~~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKST 301 (490)
T PRK10938 245 -------------PDEPSARHALPA-------NEPRIVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKST 301 (490)
T ss_pred -------------ccccccccccCC-------CCceEEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHHH
Confidence 000000000000 0124999999999963 35999999999999999999999999999
Q ss_pred HHHHHhcccCC-CCceEEECCeecCC-CCHHHHhcceEEEccCCCCCc---ccHHHHHhcCCC-------CCCH---HHH
Q 000846 1053 IIGLLERFYDP-LKGSVFMDEQDIRN-YNLKQLRSHIALVSQEPTLFA---GTIRENIAYGKA-------DARE---SEI 1117 (1255)
Q Consensus 1053 L~~lL~rl~~p-~~G~I~idG~di~~-i~~~~lR~~i~~V~Qdp~LF~---gTIreNl~~g~~-------~~~~---~ei 1117 (1255)
|+++|+|+.+| ++|+|.+||.++.. .+....|++|+|+||++.++. .|+++++.++.. .... +++
T Consensus 302 Ll~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (490)
T PRK10938 302 LLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLA 381 (490)
T ss_pred HHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHH
Confidence 99999998876 69999999987632 233456889999999987642 477777653311 0111 123
Q ss_pred HHHHHHhcHHHHHHcccccccc-ccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-
Q 000846 1118 KKAAVLANAHEFISGMKDGYDT-YCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM- 1195 (1255)
Q Consensus 1118 ~~al~~a~l~~~i~~lp~gldt-~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~- 1195 (1255)
.++++.. |++. .......+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+
T Consensus 382 ~~~l~~~-----------~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~ 450 (490)
T PRK10938 382 QQWLDIL-----------GIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISE 450 (490)
T ss_pred HHHHHHc-----------CCchhhccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhc
Confidence 3333333 3332 23444568999999999999999999999999999999999999999999998753
Q ss_pred C-CeEEEEccCchhhhh--cCEEEEEeCCEEEEec
Q 000846 1196 G-RTCVVVAHRLSTIQK--SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1196 ~-~TvI~IaHrl~ti~~--~D~I~Vl~~G~ive~G 1227 (1255)
+ .|+|+|||+++.+.. ||++++|++|++++.-
T Consensus 451 ~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 451 GETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred CCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 4 469999999999974 7999999999998764
No 88
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-68 Score=656.29 Aligned_cols=483 Identities=22% Similarity=0.349 Sum_probs=343.6
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. .+|+
T Consensus 2 l~i~~ls~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~ 67 (530)
T PRK15064 2 LSTANITMQFGA---KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLG 67 (530)
T ss_pred EEEEEEEEEeCC---cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEE
Confidence 789999999963 46999999999999999999999999999999999999999999999872 4699
Q ss_pred EeccCCccCcc-cHHHHhccCCCCC----------------CHH---HHHHH----------HHHhchHHHHhcCCCccc
Q 000846 425 LVNQEPVLFAT-SITENILFGKDGA----------------SMD---DVISA----------AKAANAHDFITKLPDGYE 474 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~~~----------------~~~---~~~~~----------~~~~~~~~~i~~l~~g~~ 474 (1255)
|++|++.++.. |++||+.++.... ..+ .+.+. .....+.+.++.+ |++
T Consensus 68 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~ 145 (530)
T PRK15064 68 KLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIP 145 (530)
T ss_pred EEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCC
Confidence 99999988865 9999998753100 000 00000 0012234555555 554
Q ss_pred chh-cCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEE
Q 000846 475 TQV-GQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIM 552 (1255)
Q Consensus 475 t~~-~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~ 552 (1255)
... .....+||||||||++|||||+.+|++|||||||++||+++...+.+.|.+ .|.|+|+|||+++.+. .||+|+
T Consensus 146 ~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~ 223 (530)
T PRK15064 146 EEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMA 223 (530)
T ss_pred hhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEE
Confidence 433 345689999999999999999999999999999999999999999999864 4789999999999986 499999
Q ss_pred EEeCCEEE-EecChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCC
Q 000846 553 VLKAGKVV-ESGSHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPAL 631 (1255)
Q Consensus 553 vl~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (1255)
+|++|+++ +.|++++.++... ..+....+.. .
T Consensus 224 ~l~~g~i~~~~g~~~~~~~~~~-~~~~~~~~~~--------------------------~-------------------- 256 (530)
T PRK15064 224 DLDYGELRVYPGNYDEYMTAAT-QARERLLADN--------------------------A-------------------- 256 (530)
T ss_pred EEeCCEEEEecCCHHHHHHHHH-HHHHHHHHHH--------------------------H--------------------
Confidence 99999994 7888777653100 0000000000 0
Q ss_pred CCCCCCCcCCCCCcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 632 NPFSPALSVGTPYSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLIS 711 (1255)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 711 (1255)
+ +
T Consensus 257 --------------------------------------------~-----~----------------------------- 258 (530)
T PRK15064 257 --------------------------------------------K-----K----------------------------- 258 (530)
T ss_pred --------------------------------------------H-----H-----------------------------
Confidence 0 0
Q ss_pred HHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHH
Q 000846 712 IYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARL 791 (1255)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl 791 (1255)
.. +
T Consensus 259 ------~~-------------------------------------------------------------~---------- 261 (530)
T PRK15064 259 ------KA-------------------------------------------------------------Q---------- 261 (530)
T ss_pred ------HH-------------------------------------------------------------H----------
Confidence 00 0
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 792 ATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLAS 871 (1255)
Q Consensus 792 ~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (1255)
.+.......+....
T Consensus 262 ------------------------------------------------------------~~~~~~~~~~~~~~------ 275 (530)
T PRK15064 262 ------------------------------------------------------------IAELQSFVSRFSAN------ 275 (530)
T ss_pred ------------------------------------------------------------HHHHHHHHHHhhcc------
Confidence 00000000000000
Q ss_pred HHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 000846 872 EAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAF 951 (1255)
Q Consensus 872 e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~ 951 (1255)
. .+ ....
T Consensus 276 ---------------~---~~-------~~~~------------------------------------------------ 282 (530)
T PRK15064 276 ---------------A---SK-------AKQA------------------------------------------------ 282 (530)
T ss_pred ---------------c---hh-------hHHH------------------------------------------------
Confidence 0 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cccCCCCCCCC-CCccccccccccEEEEEEEEECCCCCCCcccc
Q 000846 952 LILLFTAYVIAEAGSMTSDISKGSNAVRSVFAIL--DRRSEIDPDSP-QGRDIKRQMRGRIELKNVFFAYPTRPDQMILK 1028 (1255)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~--~~~~~~~~~~~-~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~ 1028 (1255)
....+++.+.. ..++....... ..+......+..|+++||+++|+. .++|+
T Consensus 283 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~ 336 (530)
T PRK15064 283 -----------------------TSRAKQIDKIKLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDN---GPLFK 336 (530)
T ss_pred -----------------------HHHHHHHhhccccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeCC---ceeec
Confidence 00000000000 00000000000 000000001235999999999963 35999
Q ss_pred ceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCC--CCc-ccHHHHH
Q 000846 1029 GLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPT--LFA-GTIRENI 1105 (1255)
Q Consensus 1029 ~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~--LF~-gTIreNl 1105 (1255)
|+||+|++||++||+||||||||||+++|+|+++|++|+|.++| +++++||||++. ++. .|+++|+
T Consensus 337 ~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i~~~~q~~~~~~~~~~t~~~~~ 405 (530)
T PRK15064 337 NLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANIGYYAQDHAYDFENDLTLFDWM 405 (530)
T ss_pred CcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEEEEEcccccccCCCCCcHHHHH
Confidence 99999999999999999999999999999999999999999998 357999999984 443 6999999
Q ss_pred hcCC-CCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHH
Q 000846 1106 AYGK-ADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSES 1184 (1255)
Q Consensus 1106 ~~g~-~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~ 1184 (1255)
.+.. +...++++.+.++..++.. ........+||||||||++||||++.+|+||||||||++||+.+.+
T Consensus 406 ~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~ 475 (530)
T PRK15064 406 SQWRQEGDDEQAVRGTLGRLLFSQ----------DDIKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIE 475 (530)
T ss_pred HHhccCCccHHHHHHHHHHcCCCh----------hHhcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHH
Confidence 6432 2223444555555544310 1123445679999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEE-EecCHHHHHhh
Q 000846 1185 LVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVV-EQGSHNELVAL 1235 (1255)
Q Consensus 1185 ~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~iv-e~G~~~eLl~~ 1235 (1255)
.+.+.|++. +.|+|+|||+++.+.. ||+|++|++|+++ ..|+++++++.
T Consensus 476 ~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 476 SLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred HHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 999999886 4699999999999876 9999999999998 78999999864
No 89
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=4.5e-66 Score=638.80 Aligned_cols=525 Identities=19% Similarity=0.213 Sum_probs=400.5
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 678 NMPEWGSALLGCIASIGSGAVQPI-NAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEK 756 (1255)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 756 (1255)
.++.++.++++++++++..++... .+++.+.+++.... ... . ...+.++.++..+..++..++..+++.+
T Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~-----~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (547)
T PRK10522 8 WRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADT-----SLL---V-LPEFLGLLLLLMAVTLGSQLALTTLGHH 78 (547)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----cch---H-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566666666666665554 35555666654321 000 0 1112222333345667888888999999
Q ss_pred HHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 757 LTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIA 836 (1255)
Q Consensus 757 ~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~ 836 (1255)
+..++|.++++++++.|++||+ ++++|++++|+++|++.+...+. .+..++..++.++++++++++++|.+++++++
T Consensus 79 ~~~~lR~~l~~~ll~~~~~~~~--~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 155 (547)
T PRK10522 79 FVYRLRSEFIKRILDTHVERIE--QLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLLVTAI 155 (547)
T ss_pred HHHHHHHHHHHHHHhCCHHHHh--ccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999999998 78899999999999999998765 46778888888899999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccH---HHHHHHHHHHHhchHHHHHHHHHHHHH
Q 000846 837 VQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQ---KRILGLFKETLRGPKEESLKHSWYSGI 913 (1255)
Q Consensus 837 ~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1255)
.+|+.+...+...+..++..++.++...+....+.|.+.|+++++ ++.+ +.+.+++.+..++..+...+..+....
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (547)
T PRK10522 156 WMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADTFHLS 234 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHH
Confidence 888877666655555566666777778888999999999999995 5443 456788888877777666665554444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCC
Q 000846 914 GLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDP 993 (1255)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~ 993 (1255)
...+...+..+..++.+++++.. +..+.+.+..+..+......++..+...+..+..+..+.+|+.++.+.+++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~ 311 (547)
T PRK10522 235 AVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF 311 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 33333333333333334444332 112333333333333345578888899999999999999999998765432211
Q ss_pred CCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCe
Q 000846 994 DSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQ 1073 (1255)
Q Consensus 994 ~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~ 1073 (1255)
.. ..+ .+..+.|+|+||+|+||+ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+
T Consensus 312 ~~--~~~--~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~ 385 (547)
T PRK10522 312 PR--PQA--FPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGK 385 (547)
T ss_pred cc--ccc--cCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCE
Confidence 11 111 111357999999999974 346999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1074 DIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1074 di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
|+++++.+++|++|+||||||.+|++|+++| + ++.++++++++++..++.+++. .|+|. .+|.+||||||
T Consensus 386 ~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~-----~~G~~LSgGq~ 455 (547)
T PRK10522 386 PVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLE-LEDGR-----ISNLKLSKGQK 455 (547)
T ss_pred ECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhh-ccccC-----CCCCCCCHHHH
Confidence 9999999999999999999999999999999 2 4567888888887777666554 23332 14889999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEe-cCHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQ-GSHN 1230 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~-G~~~ 1230 (1255)
||++||||++++|+|||||||||+||+++|+.+.+.+.+.. +++|+|+||||++++..||+|++|++|+++|. |++.
T Consensus 456 qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~~ 535 (547)
T PRK10522 456 KRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEER 535 (547)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecCCch
Confidence 99999999999999999999999999999999999998664 48999999999999999999999999999987 6665
Q ss_pred HHHh
Q 000846 1231 ELVA 1234 (1255)
Q Consensus 1231 eLl~ 1234 (1255)
+-..
T Consensus 536 ~~~~ 539 (547)
T PRK10522 536 DAAS 539 (547)
T ss_pred hhhh
Confidence 5443
No 90
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.5e-66 Score=641.99 Aligned_cols=482 Identities=22% Similarity=0.327 Sum_probs=337.3
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----------~~~i 72 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----------GIKV 72 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 5899999999962 24699999999999999999999999999999999999999999999975 2479
Q ss_pred EEeccCCccCcc-cHHHHhccCCCC----------------CC----------HHHHHHHHH-------HhchHHHHhcC
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDG----------------AS----------MDDVISAAK-------AANAHDFITKL 469 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~----------------~~----------~~~~~~~~~-------~~~~~~~i~~l 469 (1255)
|||+|+|.+++. |++||+.++... .. ..++.+.+. ...+.+.+..+
T Consensus 73 ~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (556)
T PRK11819 73 GYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL 152 (556)
T ss_pred EEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC
Confidence 999999999876 999999875310 00 001111111 11223344444
Q ss_pred CCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-c
Q 000846 470 PDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-A 548 (1255)
Q Consensus 470 ~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~ 548 (1255)
|++ .......+||||||||++|||||+.+|++||||||||+||+.+...+.+.|+++. .|+|+|||+++.+.. |
T Consensus 153 --gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 153 --RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVA 227 (556)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhc
Confidence 443 2456677999999999999999999999999999999999999999999998863 599999999999865 9
Q ss_pred CEEEEEeCCEEE-EecChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCC
Q 000846 549 NLIMVLKAGKVV-ESGSHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAAS 627 (1255)
Q Consensus 549 d~i~vl~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (1255)
|+|++|++|+++ ..|++++..+.. ..+... . . .
T Consensus 228 d~i~~l~~g~i~~~~g~~~~~~~~~---------~~~~~~---------------~----~--~---------------- 261 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSSWLEQK---------AKRLAQ---------------E----E--K---------------- 261 (556)
T ss_pred CeEEEEeCCEEEEecCCHHHHHHHH---------HHHHHH---------------H----H--H----------------
Confidence 999999999986 677776654310 000000 0 0 0
Q ss_pred CCCCCCCCCCCcCCCCCcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 628 TPALNPFSPALSVGTPYSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVG 707 (1255)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1255)
. +
T Consensus 262 ------------------------------------------~-----------~------------------------- 263 (556)
T PRK11819 262 ------------------------------------------Q-----------E------------------------- 263 (556)
T ss_pred ------------------------------------------H-----------H-------------------------
Confidence 0 0
Q ss_pred HHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHH
Q 000846 708 SLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAI 787 (1255)
Q Consensus 708 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l 787 (1255)
.. .++.+ .++. .|.+ ..+.+
T Consensus 264 -----------~~----------------------------------------~~~~~-~~~~----~~~~--~~~~~-- 283 (556)
T PRK11819 264 -----------AA----------------------------------------RQKAL-KREL----EWVR--QSPKA-- 283 (556)
T ss_pred -----------HH----------------------------------------HHHHH-HHHH----HHHH--Hhhhh--
Confidence 00 00000 0000 0000 00000
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 788 CARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGS 867 (1255)
Q Consensus 788 ~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (1255)
+. . +.+.
T Consensus 284 -----------------------------------------------------------------~~-~-~~~~------ 290 (556)
T PRK11819 284 -----------------------------------------------------------------RQ-A-KSKA------ 290 (556)
T ss_pred -----------------------------------------------------------------hH-H-HHHH------
Confidence 00 0 0000
Q ss_pred HHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHH
Q 000846 868 QLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHL 947 (1255)
Q Consensus 868 ~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 947 (1255)
..
T Consensus 291 ---------------------~~--------------------------------------------------------- 292 (556)
T PRK11819 291 ---------------------RL--------------------------------------------------------- 292 (556)
T ss_pred ---------------------HH---------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCC-CCCCCccccccccccEEEEEEEEECCCCCCCcc
Q 000846 948 FQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDP-DSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMI 1026 (1255)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~-~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~v 1026 (1255)
...++..+ ..+++.+. .....++.+...+..|+++||+++|++ .++
T Consensus 293 ----------------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~ 339 (556)
T PRK11819 293 ----------------------------ARYEELLS--EEYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGD---RLL 339 (556)
T ss_pred ----------------------------HHHHHhhc--ccccccCCCceeecCCCCCCCCeEEEEEeEEEEECC---eee
Confidence 00000000 00000000 000000000011235999999999963 359
Q ss_pred ccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCC-CCCc-ccHHHH
Q 000846 1027 LKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEP-TLFA-GTIREN 1104 (1255)
Q Consensus 1027 L~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp-~LF~-gTIreN 1104 (1255)
|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ + .+|+||||++ .++. .|++||
T Consensus 340 l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~ 408 (556)
T PRK11819 340 IDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEE 408 (556)
T ss_pred ecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEEEEEeCchhhcCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999954 2 1699999997 5654 599999
Q ss_pred HhcCCCC--C--CHHHHHHHHHHhcHHHHHHcccccccc-ccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCC
Q 000846 1105 IAYGKAD--A--RESEIKKAAVLANAHEFISGMKDGYDT-YCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALD 1179 (1255)
Q Consensus 1105 l~~g~~~--~--~~~ei~~al~~a~l~~~i~~lp~gldt-~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD 1179 (1255)
+.++... . .+.+..++++.. |+.. ........||||||||++||||++.+|++|||||||++||
T Consensus 409 l~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD 477 (556)
T PRK11819 409 ISGGLDIIKVGNREIPSRAYVGRF-----------NFKGGDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLD 477 (556)
T ss_pred HHhhcccccccccHHHHHHHHHhC-----------CCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 9875321 1 122222222222 2321 1234456799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeC-CEEEE-ecCHHHHHhh
Q 000846 1180 SVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKN-GRVVE-QGSHNELVAL 1235 (1255)
Q Consensus 1180 ~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~-G~ive-~G~~~eLl~~ 1235 (1255)
+.+...+.+.|++. + .|+|+|||+++.+.. ||+|++|++ |++.+ .|+++++++.
T Consensus 478 ~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 478 VETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred HHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 99999999999986 3 489999999999865 999999986 88874 7899988764
No 91
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=4.4e-66 Score=638.19 Aligned_cols=481 Identities=24% Similarity=0.351 Sum_probs=336.7
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
-|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 4899999999962 24699999999999999999999999999999999999999999999975 2479
Q ss_pred EEeccCCccCcc-cHHHHhccCCCC-----------------C-C--------HHHHHHHHHHhc-------hHHHHhcC
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDG-----------------A-S--------MDDVISAAKAAN-------AHDFITKL 469 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~-----------------~-~--------~~~~~~~~~~~~-------~~~~i~~l 469 (1255)
|||+|+|.++.. |++||+.++... . . ..++.++++.++ +.+.+..+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 999999999865 999999875310 0 0 111222222222 22334444
Q ss_pred CCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-c
Q 000846 470 PDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-A 548 (1255)
Q Consensus 470 ~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~ 548 (1255)
|++. ......+||||||||++|||||+.+|++|||||||++||+++...+.+.|++. +.|+|+|||+++.+.. |
T Consensus 151 --~l~~-~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCPP-WDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCCc-ccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 4422 35567899999999999999999999999999999999999999999999876 3599999999999865 9
Q ss_pred CEEEEEeCCEEE-EecChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCC
Q 000846 549 NLIMVLKAGKVV-ESGSHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAAS 627 (1255)
Q Consensus 549 d~i~vl~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (1255)
|+|++|++|+++ ..|++++..+.. +.+. .. . . .
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~~~---------~~~~-~~------------~------~--~---------------- 259 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLEQK---------EKRL-EQ------------E------E--K---------------- 259 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHHHH---------HHHH-HH------------H------H--H----------------
Confidence 999999999976 667777664310 0000 00 0 0 0
Q ss_pred CCCCCCCCCCCcCCCCCcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 628 TPALNPFSPALSVGTPYSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVG 707 (1255)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1255)
+ .
T Consensus 260 -------------------------------~-----------~------------------------------------ 261 (552)
T TIGR03719 260 -------------------------------E-----------E------------------------------------ 261 (552)
T ss_pred -------------------------------H-----------H------------------------------------
Confidence 0 0
Q ss_pred HHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHH
Q 000846 708 SLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAI 787 (1255)
Q Consensus 708 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l 787 (1255)
.. ..+++
T Consensus 262 -----------~~----------------------------------------~~~~~---------------------- 268 (552)
T TIGR03719 262 -----------SA----------------------------------------RQKAL---------------------- 268 (552)
T ss_pred -----------HH----------------------------------------HHHHH----------------------
Confidence 00 00000
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 788 CARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGS 867 (1255)
Q Consensus 788 ~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (1255)
.+. ..| .... .. ..+.+ .
T Consensus 269 -~~~----------------------------------~~~------------------~~~~--~~-~~~~~-~----- 286 (552)
T TIGR03719 269 -KRE----------------------------------LEW------------------VRSS--PK-ARQAK-S----- 286 (552)
T ss_pred -HHH----------------------------------HHH------------------HHhh--hh-hHHHH-H-----
Confidence 000 000 0000 00 00000 0
Q ss_pred HHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHH
Q 000846 868 QLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHL 947 (1255)
Q Consensus 868 ~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 947 (1255)
.....+
T Consensus 287 -------------------~~~~~~------------------------------------------------------- 292 (552)
T TIGR03719 287 -------------------KARLAR------------------------------------------------------- 292 (552)
T ss_pred -------------------HHHHHH-------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCC-CCCCCccccccccccEEEEEEEEECCCCCCCcc
Q 000846 948 FQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDP-DSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMI 1026 (1255)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~-~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~v 1026 (1255)
.++..+ ..++..+. .....+..+...+..|+++|++++|++ .++
T Consensus 293 ------------------------------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~ 337 (552)
T TIGR03719 293 ------------------------------YEELLS--QEFQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGD---KLL 337 (552)
T ss_pred ------------------------------HHhhhh--hcccccCCCceeecCCCCCCCCeEEEEeeEEEEECC---eee
Confidence 000000 00000000 000000000001225999999999963 369
Q ss_pred ccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCC-CCc-ccHHHH
Q 000846 1027 LKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPT-LFA-GTIREN 1104 (1255)
Q Consensus 1027 L~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~-LF~-gTIreN 1104 (1255)
|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+++ + .+|+|+||++. ++. .|++||
T Consensus 338 l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~ 406 (552)
T TIGR03719 338 IDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEE 406 (552)
T ss_pred eccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-c----------eEEEEEeCCccccCCCCcHHHH
Confidence 9999999999999999999999999999999999999999999955 2 16999999973 554 599999
Q ss_pred HhcCCCC--CC--HHHHHHHHHHhcHHHHHHcccccccc-ccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCC
Q 000846 1105 IAYGKAD--AR--ESEIKKAAVLANAHEFISGMKDGYDT-YCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALD 1179 (1255)
Q Consensus 1105 l~~g~~~--~~--~~ei~~al~~a~l~~~i~~lp~gldt-~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD 1179 (1255)
+.++... .. +.+.. +.+..+ |++. ........||||||||++|||||+.+|+||||||||++||
T Consensus 407 l~~~~~~~~~~~~~~~~~---------~~l~~~--~l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD 475 (552)
T TIGR03719 407 ISGGLDIIQLGKREVPSR---------AYVGRF--NFKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLD 475 (552)
T ss_pred HHhhccccccCcchHHHH---------HHHHhC--CCChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Confidence 9876421 11 11222 223332 3322 1234456799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeC-CEEE-EecCHHHHHh
Q 000846 1180 SVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKN-GRVV-EQGSHNELVA 1234 (1255)
Q Consensus 1180 ~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~-G~iv-e~G~~~eLl~ 1234 (1255)
+.+.+.+.+.|++. . .|+|+|||+++.+.. ||+|++|++ |+++ ..|+++++++
T Consensus 476 ~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 476 VETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred HHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 99999999999987 3 489999999999876 999999987 6887 4588887764
No 92
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1e-64 Score=626.74 Aligned_cols=518 Identities=18% Similarity=0.180 Sum_probs=391.6
Q ss_pred hhhCchhHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 9 RYADGKDKLLMLFGTIGSIGDGMQYPL-MVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEGLCWTR 87 (1255)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (1255)
+|.+++++. ++++++++++..+.... .+++.+.++|.... .. ..+. .++++.++..++.+++.++..+
T Consensus 6 ~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~----~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~ 74 (547)
T PRK10522 6 LVWRQYRWP-FISVMALSLASAALGIGLIAFINQRLIETADT----SL--LVLP----EFLGLLLLLMAVTLGSQLALTT 74 (547)
T ss_pred HHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----cc--hHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 344444443 34444554444444333 24566777875421 00 1111 1112222334567788888899
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 88 TAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSFILSWR 167 (1255)
Q Consensus 88 ~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (1255)
.+.++..++|.+++++++++|+++|++ +++|++++|+++|++.+..++. .++.++.+++.++++++++++++|+
T Consensus 75 ~~~~~~~~lR~~l~~~ll~~~~~~~~~-----~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~ 148 (547)
T PRK10522 75 LGHHFVYRLRSEFIKRILDTHVERIEQ-----LGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPK 148 (547)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHhc-----cCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999996 6777999999999999998766 4777888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch---HHHHHHHHHHHHHHHHHHHH
Q 000846 168 LSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAE---HETLIRFSNALQKTMELGIK 244 (1255)
Q Consensus 168 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e---~~~~~~~~~~~~~~~~~~~~ 244 (1255)
+++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++++ ++.+ +.+.+++.+..++..+...+
T Consensus 149 l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (547)
T PRK10522 149 MLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIR 227 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHH
Confidence 9999999999988888888888888888889999999999999999999996 4443 45677888877777666655
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000846 245 QGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEMVD 323 (1255)
Q Consensus 245 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~ 323 (1255)
............ .......++.+++++... .+ +.+.+..+.++......|+..+...+..++.++.+.+|+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~ 304 (547)
T PRK10522 228 ADTFHLSAVNWSNIMMLGAIGLVFYMANSLG-WA--DTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLAL 304 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 544443322222 111111222333333221 12 23333333333344557888888889999999999999999976
Q ss_pred CCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccE
Q 000846 324 RTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGE 403 (1255)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~ 403 (1255)
.+++.+... ....+..+.|+++||+|+|+++ .++|+|+||++++||++||+||||||||||+++|+|+|+|++|+
T Consensus 305 ~~~~~~~~~---~~~~~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~ 379 (547)
T PRK10522 305 APYKAEFPR---PQAFPDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGE 379 (547)
T ss_pred ccccccccc---ccccCcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeE
Confidence 543221111 1111113579999999999742 46999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCC
Q 000846 404 VLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQ 483 (1255)
Q Consensus 404 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 483 (1255)
|.+||+++++++.+++|++++||+|||.+|++|++|| + ++.+++++.++++..++.+++. .|+|. .+|.+
T Consensus 380 i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~-----~~G~~ 449 (547)
T PRK10522 380 ILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLE-LEDGR-----ISNLK 449 (547)
T ss_pred EEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhh-ccccC-----CCCCC
Confidence 9999999999999999999999999999999999999 2 3455666666666655544433 12221 14789
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhhcCEEEEEeCCEEEE
Q 000846 484 MSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRTANLIMVLKAGKVVE 561 (1255)
Q Consensus 484 LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~ 561 (1255)
||||||||++||||++++|++||||||||+||+++++.+.+.+.+.. +++|+|+||||+++++.||+|++|++|+++|
T Consensus 450 LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e 529 (547)
T PRK10522 450 LSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSE 529 (547)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999987653 4899999999999999999999999999998
Q ss_pred e
Q 000846 562 S 562 (1255)
Q Consensus 562 ~ 562 (1255)
.
T Consensus 530 ~ 530 (547)
T PRK10522 530 L 530 (547)
T ss_pred e
Confidence 6
No 93
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=3.8e-64 Score=664.96 Aligned_cols=213 Identities=23% Similarity=0.388 Sum_probs=176.8
Q ss_pred cEEEEEEEEECCCC----------CCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCeec
Q 000846 1008 RIELKNVFFAYPTR----------PDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP--LKGSVFMDEQDI 1075 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~----------~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~idG~di 1075 (1255)
.+.|+||++.++.. ....+|+|||++++|||.+||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 69999999998531 123699999999999999999999999999999999999873 689999999886
Q ss_pred CCCCHHHHhcceEEEccCCCCCc-ccHHHHHhcCC----C-CCCHHH----HHHHHHHhcHHHHHHccccccccccCCCC
Q 000846 1076 RNYNLKQLRSHIALVSQEPTLFA-GTIRENIAYGK----A-DARESE----IKKAAVLANAHEFISGMKDGYDTYCGERG 1145 (1255)
Q Consensus 1076 ~~i~~~~lR~~i~~V~Qdp~LF~-gTIreNl~~g~----~-~~~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G 1145 (1255)
++ ..+|+.+|||+|++.++. .|++|||.++. | +.+.++ +.+.++..++. +-.|+.+|..+
T Consensus 947 ~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~-------~~~~~~vg~~~ 1016 (1470)
T PLN03140 947 KQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELD-------NLKDAIVGLPG 1016 (1470)
T ss_pred Ch---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCCh-------hHhCCccCCCC
Confidence 53 456788999999998776 59999997642 2 223322 34444444443 33577787544
Q ss_pred -CCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchh--hhhcCEEEEEeC-
Q 000846 1146 -VQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLST--IQKSDTIAVIKN- 1220 (1255)
Q Consensus 1146 -~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t--i~~~D~I~Vl~~- 1220 (1255)
..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +|+|||+++|+++. ...+|++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 6899999999999999999999999999999999999999999999875 58999999999984 466999999986
Q ss_pred CEEEEecCHH
Q 000846 1221 GRVVEQGSHN 1230 (1255)
Q Consensus 1221 G~ive~G~~~ 1230 (1255)
|+++..|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999864
No 94
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-64 Score=628.05 Aligned_cols=201 Identities=25% Similarity=0.386 Sum_probs=164.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .+|
T Consensus 312 ~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 5999999999963 46999999999999999999999999999999999999999999999741 269
Q ss_pred EEEccCC--CCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 000846 1088 ALVSQEP--TLFA-GTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILK 1164 (1255)
Q Consensus 1088 ~~V~Qdp--~LF~-gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr 1164 (1255)
+|+||++ .++. .|+.+++....+...++++.+.+...++.. ..+......||||||||++||||++.
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~----------~~~~~~~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQG----------DKVTEETRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCCh----------hHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 9999985 3443 488888742122222334444443333210 11233456799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEE-EecCHHHHHh
Q 000846 1165 NPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVV-EQGSHNELVA 1234 (1255)
Q Consensus 1165 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~iv-e~G~~~eLl~ 1234 (1255)
+|+||||||||++||+.+...+.+.|++. . .|||+|||+++.+.. ||+|++|++|+++ ..|++++..+
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 99999999999999999999999999986 3 599999999999865 9999999999997 6899998853
No 95
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2.7e-62 Score=611.86 Aligned_cols=530 Identities=18% Similarity=0.172 Sum_probs=439.9
Q ss_pred HHHHHHHHhchhhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 000846 670 SQWRLLKINMPEWG-----SALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSL 744 (1255)
Q Consensus 670 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 744 (1255)
.+++++++.+|+|. .+++.+++.++...+....+++.+.+++.....+..........+.+++++..++..+..+
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~ 157 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKY 157 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567777777775 5667777777788888899999999999876544332322233444555566677777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 745 LQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGL 824 (1255)
Q Consensus 745 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~ 824 (1255)
+..++......++..++|++.+++....++.|||. ++|++.+|+++|++.+...+...+..++..++.++++++.++
T Consensus 158 ~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~ 234 (659)
T TIGR00954 158 LLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLL 234 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888889999999999999999999999983 679999999999999999999999999999999998888777
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhchHHH
Q 000846 825 V-LSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEE 903 (1255)
Q Consensus 825 ~-~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~ 903 (1255)
. ++|.+++++++.+|+.+.......+...+...+..+..++......|.+.|+++|++|+.++.+.+++.+..++..+.
T Consensus 235 ~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~ 314 (659)
T TIGR00954 235 TALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEH 314 (659)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 6 999999999999998888887777778888888888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-c----CCCCHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHH
Q 000846 904 SLKHSWYSGIGLFSSQFFNTA--STALAYWYGGRLLT-Q----ELITPEHLFQA-FLI---LLFTAYVIAEAGSMTSDIS 972 (1255)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~l~~-~----~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~ 972 (1255)
..+..+.......+..++... .....++.|...+. . |.+|.+.+++. ..+ +..+..++..+.....+++
T Consensus 315 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~ 394 (659)
T TIGR00954 315 LNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMT 394 (659)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888888888877643 22233333443332 2 67888877653 333 3455778888899999999
Q ss_pred HHHHHHHHHHHHHcccCCCCC------CCCC---C------------ccccccccccEEEEEEEEECCCCCCCcccccee
Q 000846 973 KGSNAVRSVFAILDRRSEIDP------DSPQ---G------------RDIKRQMRGRIELKNVFFAYPTRPDQMILKGLS 1031 (1255)
Q Consensus 973 ~~~~a~~ri~~~~~~~~~~~~------~~~~---~------------~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs 1031 (1255)
.+..+.+|+.++++.+++... ..+. . ........+.|+++||+|+||+ ++++|+|+|
T Consensus 395 ~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~is 472 (659)
T TIGR00954 395 RLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLS 472 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecce
Confidence 999999999999976433210 0000 0 0000112356999999999974 346999999
Q ss_pred EEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCC--
Q 000846 1032 LKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGK-- 1109 (1255)
Q Consensus 1032 ~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~-- 1109 (1255)
|+|++||++||+||||||||||+++|+|+++|++|+|.+|+ |++|+||||+|.+|++|++|||.++.
T Consensus 473 l~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~ 541 (659)
T TIGR00954 473 FEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSS 541 (659)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCCh
Confidence 99999999999999999999999999999999999999874 67899999999999999999999874
Q ss_pred -----CCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHH
Q 000846 1110 -----ADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSES 1184 (1255)
Q Consensus 1110 -----~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~ 1184 (1255)
++.++++++++++.+++++++.. |.||||..+ .+.+||||||||++||||++++|++||||||||+||+++++
T Consensus 542 ~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~ 619 (659)
T TIGR00954 542 EDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEG 619 (659)
T ss_pred hhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHH
Confidence 34678899999999999999987 999999876 56799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEe
Q 000846 1185 LVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIK 1219 (1255)
Q Consensus 1185 ~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~ 1219 (1255)
.+++.+++. ++|+|+||||++++..||+|++|+
T Consensus 620 ~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~ 652 (659)
T TIGR00954 620 YMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMD 652 (659)
T ss_pred HHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEe
Confidence 999999874 899999999999999999999996
No 96
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.8e-62 Score=613.48 Aligned_cols=529 Identities=14% Similarity=0.108 Sum_probs=428.1
Q ss_pred hHHHHhhhCchhH----HHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHH
Q 000846 4 NDGLFRYADGKDK----LLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAF 79 (1255)
Q Consensus 4 ~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (1255)
++++++|+.|+.+ ..+++.+++.++..++....+++.+.++|.+.......+. ..+..+.++++++.++..+..+
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~-~~l~~~~l~~~~~~~~~~~~~~ 157 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFA-WILFKWFLIAPPASFINSAIKY 157 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888876654 3455666666666667777779999999986532110010 0122233334444555566677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 80 VEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLL 159 (1255)
Q Consensus 80 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 159 (1255)
+..++......++..++|.+++++....++.+||. ++|++.+|+++|++.+.+.+...+..++..++.++++.+
T Consensus 158 ~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~------~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~ 231 (659)
T TIGR00954 158 LLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS------RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSF 231 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC------CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888889999999999999988889999984 456999999999999999999999999999999998888
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHH
Q 000846 160 FSFI-LSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKT 238 (1255)
Q Consensus 160 ~~~~-~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~~~~~~~~~~~~~ 238 (1255)
+++. ++|.+++++++..|+.+++..++.+++.+...+.++..++..+..+|.++|+++||+|+.|+.+.+++.+..++.
T Consensus 232 ~L~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l 311 (659)
T TIGR00954 232 KLLTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRL 311 (659)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7776 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHH--HHHHHHHHHHHHHh-h----CCCCHHHHHHH-HHH---HHHHHHHHHHHHHHHH
Q 000846 239 MELGIKQGFIKGLLMGSM-GMIYV--GWAFQAWVGSYLVT-E----KGEKGGSIFVA-GVS---IIMGGLSVLGALPNLT 306 (1255)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~g~~lv~-~----~~~~~g~~~~~-~~~---~~~~~~~~~~~~~~~~ 306 (1255)
.+...+...+.+...++. .+... ..+..++.|...+. . |.+|.|.+++. ..+ +.....|+..+...+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~ 391 (659)
T TIGR00954 312 VEHLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGR 391 (659)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888887776665 22221 22222333443332 2 67888877663 322 3455778888888899
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCC------C--C-ccc-------------ccCCCccceEEEEeEEEEcCCCCCCcccc
Q 000846 307 AITEAKVAATRIFEMVDRTPAIDT------D--D-KMG-------------KALSYVRGEIEFRDVYFCYPSRPDTLVLQ 364 (1255)
Q Consensus 307 ~~~~~~~a~~ri~~~l~~~~~~~~------~--~-~~~-------------~~~~~~~~~i~~~~v~~~y~~~~~~~~l~ 364 (1255)
.++++.++.+|+.++++.+++.+. . . ... .......+.|+++||+|+|+++ +++|+
T Consensus 392 ~i~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~ 469 (659)
T TIGR00954 392 DMTRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIE 469 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--Ceeee
Confidence 999999999999999975332110 0 0 000 0011134579999999999742 36999
Q ss_pred ceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccC
Q 000846 365 GLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFG 444 (1255)
Q Consensus 365 ~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~ 444 (1255)
|+||++++||+++|+||||||||||+++|+|+++|++|+|.+++ |++++||||+|++|++|++|||.++
T Consensus 470 ~isl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~ 538 (659)
T TIGR00954 470 SLSFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYP 538 (659)
T ss_pred cceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcC
Confidence 99999999999999999999999999999999999999999874 5689999999999999999999987
Q ss_pred C-------CCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHH
Q 000846 445 K-------DGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQ 517 (1255)
Q Consensus 445 ~-------~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~ 517 (1255)
. +..+++++.++++.+++++++.+ |.|+||..+ .+.+||||||||++||||++++|+++|||||||+||++
T Consensus 539 ~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~ 616 (659)
T TIGR00954 539 DSSEDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVD 616 (659)
T ss_pred CChhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHH
Confidence 4 23567788999999999999887 899999876 57799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeC
Q 000846 518 SERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKA 556 (1255)
Q Consensus 518 ~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~ 556 (1255)
+++.+.+.+++. |+|+|+||||++.++.||+|++|+.
T Consensus 617 ~~~~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 617 VEGYMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 999999998764 8999999999999999999999974
No 97
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=5.5e-63 Score=618.20 Aligned_cols=201 Identities=26% Similarity=0.402 Sum_probs=163.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
-|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 4899999999963 46999999999999999999999999999999999999999999999 4332 69
Q ss_pred EEEccCC-CCCc-ccHHHHHhcCCCCC--C--HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1088 ALVSQEP-TLFA-GTIRENIAYGKADA--R--ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1088 ~~V~Qdp-~LF~-gTIreNl~~g~~~~--~--~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
+|++|++ .++. .|+.||+.++.+.. . +.++.+.+...++. ++..+. ....||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~----~~~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFH------PKRAMT----PVKALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCC------HHHHhC----hhhhCCHHHHHHHHHHHH
Confidence 9999986 4655 49999998754321 1 12222222222210 111233 345799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe-CCEEEEe-cCHHHHHh
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIK-NGRVVEQ-GSHNELVA 1234 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~-~G~ive~-G~~~eLl~ 1234 (1255)
++.+|++|||||||++||+.+...+.+.|++. +.|+|+|||+++.+.. ||+|++|+ +|++.++ |++++-+.
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999876 5699999999999865 99999998 8999874 88888754
No 98
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.6e-63 Score=618.48 Aligned_cols=200 Identities=27% Similarity=0.394 Sum_probs=164.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++ +.++|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+++ +.+|
T Consensus 508 ~L~~~~ls~~y~~--~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 508 IISFSDASFGYPG--GPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred eEEEEeeEEEeCC--CCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 5999999999963 23589999999999999999999999999999999999999999999976 3579
Q ss_pred EEEccCCCCCcccHHHHHhc----CCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHc
Q 000846 1088 ALVSQEPTLFAGTIRENIAY----GKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAIL 1163 (1255)
Q Consensus 1088 ~~V~Qdp~LF~gTIreNl~~----g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALl 1163 (1255)
+|+||++. ...++.+|..+ ..+..+++++.++++..++.+. ........||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~----------~~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGN----------LALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChH----------HhcCCccccCHHHHHHHHHHHHHh
Confidence 99999973 23355555321 1223455666666666555321 122345689999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEE-EecCHHHHH
Q 000846 1164 KNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVV-EQGSHNELV 1233 (1255)
Q Consensus 1164 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~iv-e~G~~~eLl 1233 (1255)
.+|++|||||||++||+.+...+.+.+.+. + .|+|+|||+++.+.. ||+|++|++|+++ ..|++++..
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999999875 3 499999999999975 9999999999998 678888764
No 99
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-63 Score=571.98 Aligned_cols=457 Identities=26% Similarity=0.413 Sum_probs=357.1
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH-HHHhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL-KWLRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~r~~ 422 (1255)
-++++|++++|+. .++|+||||++.+||++||+|.||||||||+|.|+|.|+|++|+|.+||++....++ +.....
T Consensus 8 ll~~~~i~K~Fgg---V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFGG---VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcCC---ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 4889999999973 579999999999999999999999999999999999999999999999999987765 556778
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCCCC------HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDGAS------MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~------~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
|+.|+||+.|++. ||.|||.+|++... ..++.+. +.+.+..+ |++........+||+||||.|+||
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~-----A~~~l~~l--g~~~~~~~~v~~LsiaqrQ~VeIA 157 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRR-----ARELLARL--GLDIDPDTLVGDLSIAQRQMVEIA 157 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHH-----HHHHHHHc--CCCCChhhhhhhCCHHHHHHHHHH
Confidence 9999999999976 99999999876433 2333322 23345544 332224455568999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecCh-hHHhccC
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSH-NELMNRG 572 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~-~~l~~~~ 572 (1255)
||+..+++|+|||||||+|+.+..+.+.+.+++++ +|.++|+||||++++. .||||.||+||+.+..++. .++-.
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~-- 235 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSE-- 235 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCH--
Confidence 99999999999999999999999999999999986 5999999999999985 5999999999998875431 11000
Q ss_pred CCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCCC
Q 000846 573 EGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYDP 652 (1255)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (1255)
T Consensus 236 -------------------------------------------------------------------------------- 235 (500)
T COG1129 236 -------------------------------------------------------------------------------- 235 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHH
Q 000846 653 DDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFF 732 (1255)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 732 (1255)
+ .++..+.
T Consensus 236 ------~------------------------------------------------~lv~~Mv------------------ 243 (500)
T COG1129 236 ------D------------------------------------------------ELVRLMV------------------ 243 (500)
T ss_pred ------H------------------------------------------------HHHHHhh------------------
Confidence 0 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000846 733 LGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQA 812 (1255)
Q Consensus 733 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~ 812 (1255)
|+
T Consensus 244 ----------------------------------------------------Gr-------------------------- 245 (500)
T COG1129 244 ----------------------------------------------------GR-------------------------- 245 (500)
T ss_pred ----------------------------------------------------Cc--------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHH
Q 000846 813 IFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGL 892 (1255)
Q Consensus 813 ~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~ 892 (1255)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 893 FKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDIS 972 (1255)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1255)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHH
Q 000846 973 KGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKST 1052 (1255)
Q Consensus 973 ~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKST 1052 (1255)
++-+..++ ...... ....++++|++..- .++|+||++++||.+||.|-=|||+|-
T Consensus 246 ----------~~~~~~~~-~~~~~~-------~~~~l~v~~l~~~~-------~~~dvSf~vr~GEIlGiaGLvGaGRTE 300 (500)
T COG1129 246 ----------ELEDLFPE-PPEEGI-------GEPVLEVRNLSGGG-------KVRDVSFTVRAGEILGIAGLVGAGRTE 300 (500)
T ss_pred ----------chhhhccc-ccccCC-------CCcEEEEecCCCCC-------ceeCceeEEeCCcEEEEeccccCCHHH
Confidence 00000000 000000 11136677766421 589999999999999999999999999
Q ss_pred HHHHHhcccCCCCceEEECCeecCCCCH-HHHhcceEEEccCCC----CCcccHHHHHhcCCC-CCCHH-HHHHHHHHhc
Q 000846 1053 IIGLLERFYDPLKGSVFMDEQDIRNYNL-KQLRSHIALVSQEPT----LFAGTIRENIAYGKA-DARES-EIKKAAVLAN 1125 (1255)
Q Consensus 1053 L~~lL~rl~~p~~G~I~idG~di~~i~~-~~lR~~i~~V~Qdp~----LF~gTIreNl~~g~~-~~~~~-ei~~al~~a~ 1125 (1255)
++.+|+|..++.+|+|.+||.++.--++ +..+..|+|||-|.. +...+|++|+.+... ..+.. -+....+...
T Consensus 301 l~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~ 380 (500)
T COG1129 301 LARALFGARPASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERAL 380 (500)
T ss_pred HHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHH
Confidence 9999999999999999999998887765 468889999998874 446799999977621 11111 3445556666
Q ss_pred HHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEcc
Q 000846 1126 AHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAH 1204 (1255)
Q Consensus 1126 l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaH 1204 (1255)
+.+++..|.-.-.. ......+||||.+|+++|||+|..+|+||||||||.++|..+.+.|.+.|+++. +|++||+||.
T Consensus 381 ~~~~~~~l~Ik~~s-~~~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSS 459 (500)
T COG1129 381 AERYIRRLRIKTPS-PEQPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISS 459 (500)
T ss_pred HHHHHHhcCcccCC-ccchhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeC
Confidence 77788776432211 123346799999999999999999999999999999999999999999999986 6899999999
Q ss_pred Cchhhh-hcCEEEEEeCCEEEEecC
Q 000846 1205 RLSTIQ-KSDTIAVIKNGRVVEQGS 1228 (1255)
Q Consensus 1205 rl~ti~-~~D~I~Vl~~G~ive~G~ 1228 (1255)
.++++. .||||+||.+|+++..=+
T Consensus 460 ElpEll~~~DRIlVm~~Gri~~e~~ 484 (500)
T COG1129 460 ELPELLGLSDRILVMREGRIVGELD 484 (500)
T ss_pred ChHHHHhhCCEEEEEECCEEEEEec
Confidence 999986 699999999999987433
No 100
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.1e-62 Score=603.11 Aligned_cols=193 Identities=24% Similarity=0.315 Sum_probs=161.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
-++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .+|
T Consensus 340 ~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i 402 (590)
T PRK13409 340 LVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKI 402 (590)
T ss_pred EEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeE
Confidence 4899999999953 25999999999999999999999999999999999999999999986 159
Q ss_pred EEEccCCCC-CcccHHHHHhcCCCCCC-HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 000846 1088 ALVSQEPTL-FAGTIRENIAYGKADAR-ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN 1165 (1255)
Q Consensus 1088 ~~V~Qdp~L-F~gTIreNl~~g~~~~~-~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~ 1165 (1255)
+|+||++.+ ++.|++||+.++..... +..+.++++..++.+. ......+||||||||++|||||+++
T Consensus 403 ~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~-----------~~~~~~~LSGGe~QRvaiAraL~~~ 471 (590)
T PRK13409 403 SYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERL-----------LDKNVKDLSGGELQRVAIAACLSRD 471 (590)
T ss_pred EEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHH-----------HhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999875 56799999987532222 2233444444444332 2334567999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCH
Q 000846 1166 PSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSH 1229 (1255)
Q Consensus 1166 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~ 1229 (1255)
|+||||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||||++|+ |++...|+.
T Consensus 472 p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~-~~~~~~g~~ 537 (590)
T PRK13409 472 ADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFE-GEPGKHGHA 537 (590)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEc-Ccceeeeec
Confidence 999999999999999999999999998753 7899999999999865 99999996 488777663
No 101
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=5.4e-61 Score=538.46 Aligned_cols=462 Identities=26% Similarity=0.448 Sum_probs=362.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCC-HHHHhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLH-LKWLRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~r~~ 422 (1255)
.++++|++++|| +..+++||||+|++||++||+|+||+|||||+++|.|+|+|++|+|++||++++--+ .+.+|..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999998 356999999999999999999999999999999999999999999999999998665 4678999
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
||+|.|++.|++. ||.|||.+|.+......+........+.+..+++ |++-...+....||-||||||.|-+|||++
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 9999999999987 9999999998643111111111122334445555 777677778889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhccCCCChhHH
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNRGEGGEYYQ 579 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 579 (1255)
|++||||||||-|-|...+.+.+.++++. +|+|||+|||+++++.. |||+-||++|+++..-.+ .
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~----------- 225 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--V----------- 225 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--C-----------
Confidence 99999999999999999999999999885 59999999999999865 999999999998653210 0
Q ss_pred HHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCCCCCCcCCCCCcccccCCCCCCCccc
Q 000846 580 MVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPFSPALSVGTPYSYTIQYDPDDDSLGD 659 (1255)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1255)
. +. ..+
T Consensus 226 -------------------------------~----~~---------------------------------------t~~ 231 (501)
T COG3845 226 -------------------------------A----ET---------------------------------------TEE 231 (501)
T ss_pred -------------------------------C----CC---------------------------------------CHH
Confidence 0 00 000
Q ss_pred cccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhHHHHHHHHHHHHHHH
Q 000846 660 RIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLN 739 (1255)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1255)
. + ..+ +.
T Consensus 232 ---e----------l--------------------------------a~l---Mv------------------------- 238 (501)
T COG3845 232 ---E----------L--------------------------------AEL---MV------------------------- 238 (501)
T ss_pred ---H----------H--------------------------------HHH---hc-------------------------
Confidence 0 0 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 740 FISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFS 819 (1255)
Q Consensus 740 ~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~i~~ 819 (1255)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T COG3845 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHHHHHHhc
Q 000846 820 YIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRG 899 (1255)
Q Consensus 820 ~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~~~~~~~~~~~~~ 899 (1255)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T COG3845 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 900 PKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVR 979 (1255)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 979 (1255)
...+.
T Consensus 239 ---------------------------------------G~~v~------------------------------------ 243 (501)
T COG3845 239 ---------------------------------------GREVV------------------------------------ 243 (501)
T ss_pred ---------------------------------------CCccc------------------------------------
Confidence 00000
Q ss_pred HHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhc
Q 000846 980 SVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLER 1059 (1255)
Q Consensus 980 ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~r 1059 (1255)
.+....+. .|..--++++|++..-. + +.+.+++|||+|++||.+||.|-.|-|-+.|+.+|+|
T Consensus 244 -------~~~~~~~~--------~pg~~vL~V~~L~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisG 306 (501)
T COG3845 244 -------LRVVKPPS--------TPGEVVLEVEDLSVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISG 306 (501)
T ss_pred -------cccccCCC--------CCCCeEEEEeeeEeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhC
Confidence 00000000 01122489999998653 2 3468999999999999999999999999999999999
Q ss_pred ccCCCCceEEECCeec-CCCCHHHHhc-ceEEEccCCC----CCcccHHHHHhcCCCC---------CCHHHHHHHHHHh
Q 000846 1060 FYDPLKGSVFMDEQDI-RNYNLKQLRS-HIALVSQEPT----LFAGTIRENIAYGKAD---------ARESEIKKAAVLA 1124 (1255)
Q Consensus 1060 l~~p~~G~I~idG~di-~~i~~~~lR~-~i~~V~Qdp~----LF~gTIreNl~~g~~~---------~~~~ei~~al~~a 1124 (1255)
+..|.+|+|.++|.|+ ...+....|+ .++|||.|.+ ..+.|+.||+.++... .+..++.+.
T Consensus 307 lr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~---- 382 (501)
T COG3845 307 LRKPASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKF---- 382 (501)
T ss_pred CCccCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHH----
Confidence 9999999999999997 6677776654 6999999985 5678999999765432 122333222
Q ss_pred cHHHHHHcc---ccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEE
Q 000846 1125 NAHEFISGM---KDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCV 1200 (1255)
Q Consensus 1125 ~l~~~i~~l---p~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI 1200 (1255)
..+.++.+ +.+-++ ...+||||+.||+-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|+
T Consensus 383 -a~~li~~fdVr~~~~~~----~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVL 457 (501)
T COG3845 383 -ARELIEEFDVRAPSPDA----PARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVL 457 (501)
T ss_pred -HHHHHHHcCccCCCCCc----chhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEE
Confidence 22333332 122223 346799999999999999999999999999999999999999999998876 689999
Q ss_pred EEccCchhhhh-cCEEEEEeCCEEEEecCHHH
Q 000846 1201 VVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNE 1231 (1255)
Q Consensus 1201 ~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~e 1231 (1255)
+|+-+|+.+.. ||||.||.+|+++....+++
T Consensus 458 LiS~dLDEil~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 458 LISEDLDEILELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred EEehhHHHHHHhhheeeeeeCCceeccccccc
Confidence 99999999865 99999999999998877765
No 102
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3e-60 Score=564.20 Aligned_cols=487 Identities=27% Similarity=0.388 Sum_probs=344.1
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|+. +++++|+||++.+|+++||||+||||||||+++|+|...|++|+|...+. -++
T Consensus 3 ~i~~~~ls~~~g~---~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v 68 (530)
T COG0488 3 MITLENLSLAYGD---RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRV 68 (530)
T ss_pred eEEEeeeEEeeCC---ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceE
Confidence 4899999999963 56999999999999999999999999999999999999999999998752 269
Q ss_pred EEeccCCccCcc-cHHHHhccCCCCCCH--HHHHHHH------------------H-------HhchHHHHhcCCCcccc
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDGASM--DDVISAA------------------K-------AANAHDFITKLPDGYET 475 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~--~~~~~~~------------------~-------~~~~~~~i~~l~~g~~t 475 (1255)
+|++|++.+.+. ||.+.+..+...... .+...+. . .+.+...+..| |+..
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~ 146 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPD 146 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCc
Confidence 999999999976 999999876532100 0000000 0 02223344444 4443
Q ss_pred hhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEEEE
Q 000846 476 QVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIMVL 554 (1255)
Q Consensus 476 ~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~vl 554 (1255)
. .....+||||||.|++|||||+.+|++|||||||++||.++..++.+.|.+. +| |+|+||||-+++.. |++|+.+
T Consensus 147 ~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~-~g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 147 E-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY-PG-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred c-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC-CC-cEEEEeCCHHHHHHHhhheEEe
Confidence 3 4556799999999999999999999999999999999999999999999865 45 99999999999976 9999999
Q ss_pred eCCEEEEecChhHHhccCCCChhHHHHHHHhhcccCCCCCCCcCCccchhhhhhhhhccCCCCCCcccCCCCCCCCCCCC
Q 000846 555 KAGKVVESGSHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSSAASTPALNPF 634 (1255)
Q Consensus 555 ~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (1255)
+.|++... .|.|..+++.......... ...+
T Consensus 224 d~g~l~~y-----------~Gny~~~~~~r~~~~~~~~---------------~~~~----------------------- 254 (530)
T COG0488 224 DRGKLTPY-----------KGNYSSYLEQKAERLRQEA---------------AAYE----------------------- 254 (530)
T ss_pred cCCceeEe-----------cCCHHHHHHHHHHHHHHHH---------------HHHH-----------------------
Confidence 99977553 2445444432221100000 0000
Q ss_pred CCCCcCCCCCcccccCCCCCCCccccccccCCCchHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000846 635 SPALSVGTPYSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYF 714 (1255)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 714 (1255)
.+ .....
T Consensus 255 ---------------------------~~----~~~~~------------------------------------------ 261 (530)
T COG0488 255 ---------------------------KQ----QKELA------------------------------------------ 261 (530)
T ss_pred ---------------------------HH----HHHHH------------------------------------------
Confidence 00 00000
Q ss_pred cCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhh
Q 000846 715 RTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATE 794 (1255)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D 794 (1255)
T Consensus 262 -------------------------------------------------------------------------------- 261 (530)
T COG0488 262 -------------------------------------------------------------------------------- 261 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 795 ANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAV 874 (1255)
Q Consensus 795 ~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l 874 (1255)
T Consensus 262 -------------------------------------------------------------------------------- 261 (530)
T COG0488 262 -------------------------------------------------------------------------------- 261 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 000846 875 INHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLIL 954 (1255)
Q Consensus 875 ~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~ 954 (1255)
.+..|.+++........++..
T Consensus 262 ----------~~~~~i~r~~~~~~~~k~a~s------------------------------------------------- 282 (530)
T COG0488 262 ----------KEQEWIRRGKAAASKAKKAKS------------------------------------------------- 282 (530)
T ss_pred ----------HHHHHHHHHHhccchHHHHHH-------------------------------------------------
Confidence 000000000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcccCCCCCCCC--CCcccc-ccccccEEEEEEEEECCCCCCCccccce
Q 000846 955 LFTAYVIAEAGSMTSDISKGSNAVRSVFAI-LDRRSEIDPDSP--QGRDIK-RQMRGRIELKNVFFAYPTRPDQMILKGL 1030 (1255)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~-~~~~~~~~~~~~--~~~~~~-~~~~g~I~~~~Vsf~Y~~~~~~~vL~~v 1030 (1255)
-....+++.+- ....+....... ..++.+ ...+-.++++|++++|+.. +++++++
T Consensus 283 -------------------r~k~l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~~~ 341 (530)
T COG0488 283 -------------------RIKRLEKLEARLAEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLKDL 341 (530)
T ss_pred -------------------HHHHHHHHHhhhhhcccccccccceeeccCCcccCCCeeEEEeccccccCCC--ceeecCc
Confidence 00000111100 000111000000 000000 1123459999999999642 5799999
Q ss_pred eEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCC-CCC-cccHHHHHhcC
Q 000846 1031 SLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEP-TLF-AGTIRENIAYG 1108 (1255)
Q Consensus 1031 s~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp-~LF-~gTIreNl~~g 1108 (1255)
||.|.+|++||||||||+|||||+++|.|-..|.+|+|.+.-. -+|||.+|+- .++ +.|+-|++.-.
T Consensus 342 s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~-----------v~igyf~Q~~~~l~~~~t~~d~l~~~ 410 (530)
T COG0488 342 SFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGET-----------VKIGYFDQHRDELDPDKTVLEELSEG 410 (530)
T ss_pred eEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCCc-----------eEEEEEEehhhhcCccCcHHHHHHhh
Confidence 9999999999999999999999999999999999999998642 3699999998 444 34999999766
Q ss_pred CCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHH
Q 000846 1109 KADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQE 1188 (1255)
Q Consensus 1109 ~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~ 1188 (1255)
.|+..+.++...+...+...- -..++ ...||||||-|+.||+.++.+|.+|||||||.+||.+|-..+.+
T Consensus 411 ~~~~~e~~~r~~L~~f~F~~~------~~~~~----v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~ 480 (530)
T COG0488 411 FPDGDEQEVRAYLGRFGFTGE------DQEKP----VGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEE 480 (530)
T ss_pred CccccHHHHHHHHHHcCCChH------HHhCc----hhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHH
Confidence 655456667666655543221 12333 45699999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEe-cCHHHHHhh
Q 000846 1189 ALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQ-GSHNELVAL 1235 (1255)
Q Consensus 1189 ~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~-G~~~eLl~~ 1235 (1255)
+|.+. ..|||+|||+.+.+.. |++|+++++ ++.++ |++++.++.
T Consensus 481 aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 481 ALLDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred HHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 99886 4599999999999977 999999999 88887 899988764
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1e-53 Score=476.56 Aligned_cols=238 Identities=26% Similarity=0.438 Sum_probs=224.3
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcc
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSH 1086 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1086 (1255)
|.|+|+||+++|+.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++ ++|+|++||+++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 569999999999732 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred eEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 000846 1087 IALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNP 1166 (1255)
Q Consensus 1087 i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p 1166 (1255)
|+||||+|.+|++|+++|+.+.. ..++++++++++.+++.+++..+|++||+.++|+|.+||||||||+|||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999996433 25788999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHh
Q 000846 1167 SILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIK 1246 (1255)
Q Consensus 1167 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~ 1246 (1255)
+||||||||++||+.+++.+++.|++.++++|+|+||||++++..||||+||++|++++.|+|++|++. ++.|++++.
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~ 235 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE--KSHFKQAIS 235 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC--cHHHHHHHh
Confidence 999999999999999999999999998889999999999999999999999999999999999999985 689999987
Q ss_pred hhc
Q 000846 1247 PQG 1249 (1255)
Q Consensus 1247 ~~~ 1249 (1255)
+..
T Consensus 236 ~~~ 238 (275)
T cd03289 236 PSD 238 (275)
T ss_pred hcc
Confidence 664
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-52 Score=420.83 Aligned_cols=226 Identities=32% Similarity=0.517 Sum_probs=193.7
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCC-CCHHHHhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRR-LHLKWLRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~-~~~~~~r~~ 422 (1255)
.|+++||+++|++ ..||+|||++|++||.++|+||||||||||+++|.|+-+|++|+|.+||.++.. .+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 4899999999973 469999999999999999999999999999999999999999999999987743 378899999
Q ss_pred cEEeccCCccCcc-cHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHh
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARAL 498 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal 498 (1255)
+|+|+|+..||+. ||.||+.++.- ..+.++..+ .+.+.+.++ |+.......+.+|||||||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~-----~A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARAL 151 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEARE-----KALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 151 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHH-----HHHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHH
Confidence 9999999999986 99999998742 122222221 123344444 666666666789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhccCCCCh
Q 000846 499 IRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNRGEGGE 576 (1255)
Q Consensus 499 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~ 576 (1255)
..+|+++++|||||||||+....+.+.++++. +|.|.|+|||.+.+.+. ||||+.|++|+|+++|+|+++..++....
T Consensus 152 aM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~~R 231 (240)
T COG1126 152 AMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKSER 231 (240)
T ss_pred cCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCCHH
Confidence 99999999999999999999999999999885 58999999999999976 99999999999999999999998754443
Q ss_pred hHH
Q 000846 577 YYQ 579 (1255)
Q Consensus 577 ~~~ 579 (1255)
..+
T Consensus 232 ~~~ 234 (240)
T COG1126 232 TRQ 234 (240)
T ss_pred HHH
Confidence 333
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-50 Score=405.76 Aligned_cols=214 Identities=31% Similarity=0.527 Sum_probs=187.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecC-CCCHHHHhcc
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIR-NYNLKQLRSH 1086 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~~~~lR~~ 1086 (1255)
-|+++||+.+|. +..||+|||++|++||.++|+||||||||||+++|.+|-+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 389999999996 346999999999999999999999999999999999999999999999998774 3378899999
Q ss_pred eEEEccCCCCCc-ccHHHHHhcCCC---CCCHHH----HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHH
Q 000846 1087 IALVSQEPTLFA-GTIRENIAYGKA---DARESE----IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIAL 1158 (1255)
Q Consensus 1087 i~~V~Qdp~LF~-gTIreNl~~g~~---~~~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlal 1158 (1255)
+|+|+|+..||. .|+.||+.++-- ..+.+| -.+-++++|+.|-.... +.+||||||||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----------P~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAY-----------PAQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhC-----------ccccCcHHHHHHHH
Confidence 999999999997 599999987631 222222 22334555555544443 56899999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1159 ARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1159 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
||||.-+|+++++|||||||||+.-..+.+.++++. .|.|.|+|||.+...++ ||||+.||+|+++|.|+|+++..+
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999999986 58899999999999987 899999999999999999999986
No 106
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-49 Score=452.54 Aligned_cols=231 Identities=30% Similarity=0.494 Sum_probs=200.7
Q ss_pred cccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecC
Q 000846 1002 KRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIR 1076 (1255)
Q Consensus 1002 ~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~ 1076 (1255)
.|+..+.|+|+|++++|+.. +.++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.|||+++.
T Consensus 74 ~~~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~ 152 (329)
T PRK14257 74 DFNHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTR 152 (329)
T ss_pred CCCcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 36667889999999999642 3469999999999999999999999999999999999997 57999999999997
Q ss_pred --CCCHHHHhcceEEEccCCCCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHH
Q 000846 1077 --NYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1077 --~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1152 (1255)
.+++..+|++++||||+|.+|++|++|||.++.. ..++++.+++.....++.. .++.++++.++++|.+|||||
T Consensus 153 ~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~--~L~~~l~~~~~~~~~~LSgGq 230 (329)
T PRK14257 153 SKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSA--ALWDEVKDDLDKAGNALSGGQ 230 (329)
T ss_pred ccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHc--CCcchhhhhhhCCcccCCHHH
Confidence 4566789999999999999999999999997632 2444554433222222211 144567788999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHH
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNE 1231 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~e 1231 (1255)
|||+|||||++++|+|||||||||+||+++.+.+++.|++.++++|+|+|||+++++.+ ||||+||++|+|+|.|+|++
T Consensus 231 kqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~ 310 (329)
T PRK14257 231 QQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKT 310 (329)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999889999999999999988 99999999999999999999
Q ss_pred HHhh
Q 000846 1232 LVAL 1235 (1255)
Q Consensus 1232 Ll~~ 1235 (1255)
+...
T Consensus 311 l~~~ 314 (329)
T PRK14257 311 IFIH 314 (329)
T ss_pred HhcC
Confidence 9875
No 107
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-49 Score=422.66 Aligned_cols=227 Identities=32% Similarity=0.531 Sum_probs=194.6
Q ss_pred EEEEeEEEEcCCC--CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH---HHH
Q 000846 345 IEFRDVYFCYPSR--PDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL---KWL 419 (1255)
Q Consensus 345 i~~~~v~~~y~~~--~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~ 419 (1255)
|+++||++.|+.. +...+|+||||+|++||+.+|+|+||+|||||++++.++-.|++|+|.+||+++..++. ..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999852 23569999999999999999999999999999999999999999999999999988764 567
Q ss_pred hcccEEeccCCccCc-ccHHHHhccCCCCCC--HH----HHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHH
Q 000846 420 RSQMGLVNQEPVLFA-TSITENILFGKDGAS--MD----DVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 420 r~~i~~v~Q~~~l~~-~ti~~ni~~~~~~~~--~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri 492 (1255)
|++||+++|++.|++ .||.+|++|+.+-+. .+ ++.+.++.+ |+....+..+.+|||||||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelV-----------gL~dk~~~yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELV-----------GLSDKADRYPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHc-----------CChhhhccCchhcCcchhhHH
Confidence 789999999999997 599999999865222 22 233333333 555555666789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELM 569 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 569 (1255)
+|||||..+|+||+.|||||||||+|.+.|.+.|++..+ |.|+++|||.++.++. |||+.||++|+++|+|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999998743 8999999999999976 9999999999999999999999
Q ss_pred ccCCCChhHHHHH
Q 000846 570 NRGEGGEYYQMVE 582 (1255)
Q Consensus 570 ~~~~~~~~~~~~~ 582 (1255)
.+++...-.+++.
T Consensus 231 ~~Pk~~~t~~fi~ 243 (339)
T COG1135 231 ANPKHAITQEFIG 243 (339)
T ss_pred cCcchHHHHHHHH
Confidence 8765444444443
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-49 Score=419.69 Aligned_cols=228 Identities=36% Similarity=0.542 Sum_probs=192.5
Q ss_pred EEEEEEEEECCCC--CCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCH---HHH
Q 000846 1009 IELKNVFFAYPTR--PDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNL---KQL 1083 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~--~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~l 1083 (1255)
|+|+||++.|+.. ....+|+||||+|++||..||+|+||+|||||++++.++-.|++|+|.+||.|+..++- ..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999852 12469999999999999999999999999999999999999999999999998887765 556
Q ss_pred hcceEEEccCCCCCc-ccHHHHHhcCCC--CCCHHH----HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1084 RSHIALVSQEPTLFA-GTIRENIAYGKA--DARESE----IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1084 R~~i~~V~Qdp~LF~-gTIreNl~~g~~--~~~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
|++||+|+|++.|++ .|+.+|++|+.. ..+.++ +.+.++.+|+.|+ .+....+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk-----------~~~yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDK-----------ADRYPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhh-----------hccCchhcCcchhhHH
Confidence 789999999999998 799999998743 233333 3344444444433 3445689999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
+|||||..+|+||+.|||||||||+|-+.|.+.|++.- -|-|+++|||.|+.+++ |||+.||++|+|+|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999998864 38899999999999987 9999999999999999999999
Q ss_pred hhhcCchhHHHHhh
Q 000846 1234 ALSRGGAYYSLIKP 1247 (1255)
Q Consensus 1234 ~~~~~g~y~~l~~~ 1247 (1255)
.+.+...=.+++..
T Consensus 231 ~~Pk~~~t~~fi~~ 244 (339)
T COG1135 231 ANPKHAITQEFIGE 244 (339)
T ss_pred cCcchHHHHHHHHh
Confidence 86223333445443
No 109
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.8e-48 Score=432.88 Aligned_cols=236 Identities=24% Similarity=0.439 Sum_probs=218.1
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcc
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQ 422 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 422 (1255)
|.|+++|++++|+.. +.++|+|+||+|++||+++|+||||||||||+++|+|+++ ++|+|++||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 469999999999742 3469999999999999999999999999999999999997 78999999999999999999999
Q ss_pred cEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCC
Q 000846 423 MGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDP 502 (1255)
Q Consensus 423 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~ 502 (1255)
|+||||+|.+|++|+++|+.... ..++++++++++.+++.+++..+|+++++.++++|.+||||||||++||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999996332 24678899999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHHHHH
Q 000846 503 KILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVE 582 (1255)
Q Consensus 503 ~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 582 (1255)
+||||||||++||+.+++.+++.|++..+++|+|+||||++++..||||++|++|++++.|+|++++++ .+.|++++.
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~ 235 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE--KSHFKQAIS 235 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC--cHHHHHHHh
Confidence 999999999999999999999999988779999999999999988999999999999999999999884 466667665
Q ss_pred H
Q 000846 583 L 583 (1255)
Q Consensus 583 ~ 583 (1255)
.
T Consensus 236 ~ 236 (275)
T cd03289 236 P 236 (275)
T ss_pred h
Confidence 4
No 110
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-49 Score=403.57 Aligned_cols=220 Identities=33% Similarity=0.570 Sum_probs=190.0
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+|+|||++|. +..+++|+||+|++||+++++|||||||||++++|.|+++|++|+|++||+++++++...+|++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999997 356999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccc--hhcCCCCCCChHHHHHHHHHHHhc
Q 000846 425 LVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYET--QVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t--~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
||-|...||+. ||.|||.+-.. ..+.+++.+ .+++.+..+ |++. ...+.+.+|||||+|||.+||||.
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~-----r~~ELl~lv--gL~p~~~~~RyP~eLSGGQQQRVGv~RALA 151 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKK-----RADELLDLV--GLDPSEYADRYPHELSGGQQQRVGVARALA 151 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHH-----HHHHHHHHh--CCCHHHHhhcCchhcCcchhhHHHHHHHHh
Confidence 99999999976 99999987432 112222211 122333322 4432 344556799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhh-hhcCEEEEEeCCEEEEecChhHHhccCCC
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTI-RTANLIMVLKAGKVVESGSHNELMNRGEG 574 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~-~~~d~i~vl~~G~i~~~g~~~~l~~~~~~ 574 (1255)
.+|+|+++|||++||||.++..+|+.+.++.+ |+|+|+|||++++. +.+|||.+|++|+++..++|++++.++.+
T Consensus 152 adP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan 229 (309)
T COG1125 152 ADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPAN 229 (309)
T ss_pred cCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccH
Confidence 99999999999999999999999999998865 89999999999986 66999999999999999999999987544
No 111
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-49 Score=392.45 Aligned_cols=221 Identities=35% Similarity=0.524 Sum_probs=198.7
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCc-----cEEEECCeecCC--CC
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVE-----GEVLLDGYKIRR--LH 415 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~-----G~i~~~g~~~~~--~~ 415 (1255)
..++++|+++.|++ ..+|+|||++|++++++|++|||||||||+++++.|+.+..+ |+|.++|+|+.+ .+
T Consensus 6 ~~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 36899999999973 469999999999999999999999999999999999998876 999999999976 47
Q ss_pred HHHHhcccEEeccCCccCcccHHHHhccCCCC------CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 416 LKWLRSQMGLVNQEPVLFATSITENILFGKDG------ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
...+|++||+|+|.|.-|+.||+||+.||..- .-++-+.++++.+.+++-++. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 88999999999999999999999999998531 113447788889988877653 35567889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||+||||||.-+|+|||||||||||||.+...|.+.|.+++++-|+|+|||.+.... .+|+..++..|+++|.|+.+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 999999999999999999999999999999999999999999999999999999875 5999999999999999999999
Q ss_pred hccCC
Q 000846 569 MNRGE 573 (1255)
Q Consensus 569 ~~~~~ 573 (1255)
..++.
T Consensus 236 F~~P~ 240 (253)
T COG1117 236 FTNPK 240 (253)
T ss_pred hcCcc
Confidence 87643
No 112
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-48 Score=391.04 Aligned_cols=218 Identities=33% Similarity=0.537 Sum_probs=198.8
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCC-----ceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLK-----GSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~-----G~I~idG~di~~--i~~ 1080 (1255)
.++++|+++-|. +..+|+|||++|++++.+|++|||||||||++++|.|+.|... |+|.+||.||-+ ++.
T Consensus 7 ~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 589999999996 3469999999999999999999999999999999999999875 999999999976 578
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC------CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA------DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQ 1154 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~------~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQ 1154 (1255)
..||++||+|+|.|.-|..||+||+.||.. ..-||-++++++.|.+||-+.. .| .+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---rL----~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---RL----HKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---Hh----hCCccCCChhHHH
Confidence 999999999999999999999999999832 2235668899999999998853 34 4567889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhh-hhcCEEEEEeCCEEEEecCHHHHH
Q 000846 1155 RIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTI-QKSDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1155 rlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti-~~~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
||||||||.-+|+|||||||||||||.+-..|.+.|.++.++-|+|+|||.+.-. +-+|+...+-.|+++|+|.-+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 9999999999999999999999999999999999999999999999999999986 458999999999999999999998
Q ss_pred hh
Q 000846 1234 AL 1235 (1255)
Q Consensus 1234 ~~ 1235 (1255)
.+
T Consensus 237 ~~ 238 (253)
T COG1117 237 TN 238 (253)
T ss_pred cC
Confidence 75
No 113
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.2e-47 Score=430.94 Aligned_cols=198 Identities=29% Similarity=0.382 Sum_probs=161.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|.++||+|+|++.+ .++++++|-|.++++||+|||||+|||||++++.|...|+.|.|.-.-. .++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccc
Confidence 499999999997543 6899999999999999999999999999999999999999998875432 234
Q ss_pred EEEccCC---CCCcccHHHHHhcCCC-CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHc
Q 000846 1088 ALVSQEP---TLFAGTIRENIAYGKA-DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAIL 1163 (1255)
Q Consensus 1088 ~~V~Qdp---~LF~gTIreNl~~g~~-~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALl 1163 (1255)
++..|+- .-++.|.-|++.---+ .-..+++...+...|+..-... .++ .+||+|||.|++.||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~------~p~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQV------VPM----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccc------cch----hhcccccchhHHHHHHHh
Confidence 4444543 3567788888854333 2456677777777776533322 222 579999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEE-ecCHH
Q 000846 1164 KNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVE-QGSHN 1230 (1255)
Q Consensus 1164 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive-~G~~~ 1230 (1255)
+.|.||||||||++||.+|-..+.++|.+. ..+||+|+|+...|.+ +++|.+.++|.+.. .|...
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~ 592 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIE 592 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecCccHH
Confidence 999999999999999999999999999887 5589999999999977 89999999988865 35543
No 114
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-47 Score=393.96 Aligned_cols=220 Identities=32% Similarity=0.531 Sum_probs=190.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+|+|||++|. ++.+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++..+||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999996 456999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCc-ccHHHHHhcCCC--CCCHHH----HHHHHHHhcHH--HHHHccccccccccCCCCCCCChHHHHHHHHH
Q 000846 1089 LVSQEPTLFA-GTIRENIAYGKA--DARESE----IKKAAVLANAH--EFISGMKDGYDTYCGERGVQLSGGQKQRIALA 1159 (1255)
Q Consensus 1089 ~V~Qdp~LF~-gTIreNl~~g~~--~~~~~e----i~~al~~a~l~--~~i~~lp~gldt~vge~G~~LSgGQkQrlalA 1159 (1255)
||-|.--||. .||.|||++--. .-+.++ +.+-++.+++. +|.. .-..+|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~-----------RyP~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYAD-----------RYPHELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhh-----------cCchhcCcchhhHHHHH
Confidence 9999999997 599999975311 223333 33444444442 2333 33568999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhh-hhcCEEEEEeCCEEEEecCHHHHHhhh
Q 000846 1160 RAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTI-QKSDTIAVIKNGRVVEQGSHNELVALS 1236 (1255)
Q Consensus 1160 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti-~~~D~I~Vl~~G~ive~G~~~eLl~~~ 1236 (1255)
|||..+|+||++|||.+||||.|...+|+-+.+..+ ++|+|+|||++++. +-+|||+||++|+++.+|+|++++++
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~- 226 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN- 226 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC-
Confidence 999999999999999999999999999999988754 89999999999886 55999999999999999999999986
Q ss_pred cCchhHH
Q 000846 1237 RGGAYYS 1243 (1255)
Q Consensus 1237 ~~g~y~~ 1243 (1255)
+...|-+
T Consensus 227 Pan~FV~ 233 (309)
T COG1125 227 PANDFVE 233 (309)
T ss_pred ccHHHHH
Confidence 5555543
No 115
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.2e-46 Score=416.23 Aligned_cols=235 Identities=46% Similarity=0.747 Sum_probs=217.9
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++||+++|+.. +.++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999642 346999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 000846 1089 LVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSI 1168 (1255)
Q Consensus 1089 ~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~I 1168 (1255)
|+||++.+|+.|++|||.++.+..+.+++.++++..++.+++..+|.|+++..+..+.+||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999887654556677778888899999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHh
Q 000846 1169 LLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIK 1246 (1255)
Q Consensus 1169 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~ 1246 (1255)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++++. .+.|+.+++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~~~ 235 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE--NGLYAYLYQ 235 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc--cChHHHHHh
Confidence 9999999999999999999999998778999999999999988999999999999999999999875 788888775
No 116
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-46 Score=429.54 Aligned_cols=227 Identities=31% Similarity=0.493 Sum_probs=197.4
Q ss_pred CCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCC
Q 000846 339 SYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRR 413 (1255)
Q Consensus 339 ~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~ 413 (1255)
|+..+.|+++|++++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++..
T Consensus 75 ~~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 75 FNHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 4556789999999999642 3469999999999999999999999999999999999996 579999999999974
Q ss_pred --CCHHHHhcccEEeccCCccCcccHHHHhccCCC--CCCHHHHH-----HHHHHhchHHHHhcCCCcccchhcCCCCCC
Q 000846 414 --LHLKWLRSQMGLVNQEPVLFATSITENILFGKD--GASMDDVI-----SAAKAANAHDFITKLPDGYETQVGQLGFQM 484 (1255)
Q Consensus 414 --~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~~~~~~-----~~~~~~~~~~~i~~l~~g~~t~~~~~g~~L 484 (1255)
.+...+|+.++||||+|++|++|++|||.|+.. ..++++.+ ++++.++ +++++++.++++|.+|
T Consensus 154 ~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~L 226 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNAL 226 (329)
T ss_pred cccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccC
Confidence 445678999999999999999999999998642 22333332 2233332 4456678899999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000846 485 SGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESG 563 (1255)
Q Consensus 485 SgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g 563 (1255)
|||||||++||||++++|+|||||||||+||+++.+.+++.|+++.+++|+|+|||+++++.. ||||++|++|++++.|
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g 306 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAG 306 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999998888999999999999876 9999999999999999
Q ss_pred ChhHHhccCC
Q 000846 564 SHNELMNRGE 573 (1255)
Q Consensus 564 ~~~~l~~~~~ 573 (1255)
+++++...+.
T Consensus 307 ~~~~l~~~~~ 316 (329)
T PRK14257 307 ETKTIFIHPK 316 (329)
T ss_pred CHHHHhcCCC
Confidence 9999987543
No 117
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.2e-46 Score=416.84 Aligned_cols=241 Identities=31% Similarity=0.530 Sum_probs=222.3
Q ss_pred ccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHh
Q 000846 1005 MRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLR 1084 (1255)
Q Consensus 1005 ~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 1084 (1255)
..|.|+++|++++|+.. +.++|+|+||+|+|||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 45789999999999742 24699999999999999999999999999999999999999999999999999999888999
Q ss_pred cceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 000846 1085 SHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILK 1164 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr 1164 (1255)
++|+|++|+|.+|++|++||+.+.. ....++++++++..++.+++..+|.|+++.+++.+.+||||||||++||||+++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPEC-KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCC-CCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999996543 234567888888899999999999999999999999999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHH
Q 000846 1165 NPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSL 1244 (1255)
Q Consensus 1165 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l 1244 (1255)
+|++|||||||++||+++++.+.+.+++..+++|+|++||+++.+..||+|++|++|++++.|+++++++. .++.|+.+
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~-~~~~~~~~ 252 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQ-EDGVFASL 252 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhc-cchHHHHH
Confidence 99999999999999999999999999988778999999999999999999999999999999999999875 57889888
Q ss_pred Hhhh
Q 000846 1245 IKPQ 1248 (1255)
Q Consensus 1245 ~~~~ 1248 (1255)
+..+
T Consensus 253 ~~~~ 256 (257)
T cd03288 253 VRTD 256 (257)
T ss_pred Hhcc
Confidence 7643
No 118
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-43 Score=381.31 Aligned_cols=470 Identities=20% Similarity=0.231 Sum_probs=351.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 67 LLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISN 146 (1255)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~~ 146 (1255)
+.++.++..+.+.+........++.+..++|.++.++++..|+.-+++ .++++++.++++|+..|. +-...++.
T Consensus 54 f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier-----~~~~rlla~L~~Dvr~IS-f~~s~lp~ 127 (546)
T COG4615 54 FLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER-----LGSARLLAGLTSDVRNIS-FAFSRLPE 127 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-----hcccchhhhhccccccee-ehHhhhHH
Confidence 334444445556666777788899999999999999999999999997 677899999999999999 44456788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHH
Q 000846 147 TLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHE 226 (1255)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~vk~~~~e~~ 226 (1255)
+.+++..++++.+.+.|+|+++.++.++++.+.++...+...+..+......+..++..+..+..+.|-+..+......+
T Consensus 128 ~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~ 207 (546)
T COG4615 128 LVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAE 207 (546)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHH
Confidence 99999999999999999999998888888888888888888888888888888889999999999999998877643332
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 227 --TLIRFSNALQKTMELGIKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALP 303 (1255)
Q Consensus 227 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 303 (1255)
..++|...-++.++................ .+++..+.+.||+.... +.-+.....+..+.+++.-.|+.++..
T Consensus 208 ~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~---~w~st~~a~tivlvlLflr~pL~s~vg 284 (546)
T COG4615 208 YVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSL---GWASTNVAATIVLVLLFLRTPLLSAVG 284 (546)
T ss_pred HHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccchhhHHHHHHHHHHHHhhHHHHHHh
Confidence 223333322222221111111100000111 23333444555554322 222222333344555566778999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCC
Q 000846 304 NLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSG 383 (1255)
Q Consensus 304 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sG 383 (1255)
.++.+..|.+|.+||.++-..|+..+-......+. -..|+++||.|+|+.. ..-+..||++|++||++-|+|.||
T Consensus 285 ilP~l~~AqvA~~kiakle~~~~~a~~~~~q~~p~---~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NG 359 (546)
T COG4615 285 ILPTLLTAQVAFNKIAKLELAPYKADFPRPQAFPD---WKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNG 359 (546)
T ss_pred hhhHHHHHHHHHHHHHHhhcCCccccCCCCCcCCc---ccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCC
Confidence 99999999999999988765443322111111111 2369999999999743 256889999999999999999999
Q ss_pred CcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCC-CCHHHHHHHHHHhch
Q 000846 384 SGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDG-ASMDDVISAAKAANA 462 (1255)
Q Consensus 384 sGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~-~~~~~~~~~~~~~~~ 462 (1255)
|||||++++|.|+|.|++|+|++||++++.-++++.|+-++-|+-|.+||+.++ |.+. ++.+.+..-++.-.+
T Consensus 360 sGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel 433 (546)
T COG4615 360 SGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLEL 433 (546)
T ss_pred CcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998765 4333 556555544443333
Q ss_pred HHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh--cCCCeEEEEec
Q 000846 463 HDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKV--SKGRTTLIIAH 540 (1255)
Q Consensus 463 ~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~--~~~~t~i~itH 540 (1255)
.... .+-+|--+ ...||-|||.|+|+--|++-+.||++|||=-+--||.-++.+.+.+... .+|||++.|||
T Consensus 434 ~~kt-sl~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsH 507 (546)
T COG4615 434 AHKT-SLNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISH 507 (546)
T ss_pred hhhh-cccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEec
Confidence 2222 22222111 1469999999999999999999999999999999999999988877544 34999999999
Q ss_pred CchhhhhcCEEEEEeCCEEEEe
Q 000846 541 RLSTIRTANLIMVLKAGKVVES 562 (1255)
Q Consensus 541 ~~~~~~~~d~i~vl~~G~i~~~ 562 (1255)
|-.....|||++.|++|+++|.
T Consensus 508 Dd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 508 DDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred CchhhhhHHHHHHHhcCceeec
Confidence 9999999999999999999985
No 119
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.8e-45 Score=447.60 Aligned_cols=213 Identities=26% Similarity=0.416 Sum_probs=173.0
Q ss_pred EEEEEEEEECCC-CCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCeecCCCCHHHHhc
Q 000846 1009 IELKNVFFAYPT-RPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP--LKGSVFMDEQDIRNYNLKQLRS 1085 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~-~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~idG~di~~i~~~~lR~ 1085 (1255)
...+|+.+.-+. ...+..|+|||=-++||.-+|++|.||||||||++.|.+=..- .+|+|+|||.+..+ +..++
T Consensus 788 ~~w~dl~~~~~~qG~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R 864 (1391)
T KOG0065|consen 788 FYWVDLPYEMPIQGGTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFAR 864 (1391)
T ss_pred EEEEeCCccccccccceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhcc
Confidence 344555544331 1235689999999999999999999999999999999987532 47999999999765 78999
Q ss_pred ceEEEccCC-CCCcccHHHHHhcCC----C-CCCHHH----HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHH
Q 000846 1086 HIALVSQEP-TLFAGTIRENIAYGK----A-DARESE----IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQR 1155 (1255)
Q Consensus 1086 ~i~~V~Qdp-~LF~gTIreNl~~g~----~-~~~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQr 1155 (1255)
.+|||.|++ ++-.-||||-|.|.. | +.+++| ++++.+..++.++ =|..||.-|..||..||.|
T Consensus 865 ~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~-------~daiVG~~G~GLs~eQRKr 937 (1391)
T KOG0065|consen 865 VSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY-------ADALVGLPGSGLSTEQRKR 937 (1391)
T ss_pred ccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh-------hhhhccCCCCCCCHHHhce
Confidence 999999987 566679999997652 2 334433 3444444444433 3566898899999999999
Q ss_pred HHHHHHHccCC-CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchh--hhhcCEEEEEe-CCEEEEecCHH
Q 000846 1156 IALARAILKNP-SILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLST--IQKSDTIAVIK-NGRVVEQGSHN 1230 (1255)
Q Consensus 1156 lalARALlr~p-~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t--i~~~D~I~Vl~-~G~ive~G~~~ 1230 (1255)
|.||--|+.|| .||+||||||+||+++...|.+.+++.. .|+||++.-|.++. .+..|+++.|+ .|+.|..|+..
T Consensus 938 LTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG 1017 (1391)
T KOG0065|consen 938 LTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLG 1017 (1391)
T ss_pred eeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcc
Confidence 99999999999 9999999999999999999999999986 69999999999886 47799999995 68999998754
Q ss_pred H
Q 000846 1231 E 1231 (1255)
Q Consensus 1231 e 1231 (1255)
+
T Consensus 1018 ~ 1018 (1391)
T KOG0065|consen 1018 E 1018 (1391)
T ss_pred c
Confidence 4
No 120
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.9e-46 Score=380.34 Aligned_cols=215 Identities=33% Similarity=0.564 Sum_probs=187.1
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH---HHH
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL---KWL 419 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~ 419 (1255)
..|++++|+++|++ +.+++||||+|++||+++|+||||||||||+++|.|+..|++|+|.++|+++.+++. ..+
T Consensus 7 ~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 46999999999974 469999999999999999999999999999999999999999999999999998875 357
Q ss_pred hcccEEeccCCccCcc-cHHHHhccCCCC---CCHHHH----HHHHHHhchHHH-HhcCCCcccchhcCCCCCCChHHHH
Q 000846 420 RSQMGLVNQEPVLFAT-SITENILFGKDG---ASMDDV----ISAAKAANAHDF-ITKLPDGYETQVGQLGFQMSGGQKQ 490 (1255)
Q Consensus 420 r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~---~~~~~~----~~~~~~~~~~~~-i~~l~~g~~t~~~~~g~~LSgGqrq 490 (1255)
|+++|+++|.-.||+. ||+||+.|...+ ...+.+ ...++.+++... .+. -++.||||+|.
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~-----------~PsELSGGM~K 152 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADL-----------YPSELSGGMRK 152 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhh-----------CchhhcchHHH
Confidence 9999999999999987 999999986432 222222 223344444333 233 34799999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 000846 491 RIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNE 567 (1255)
Q Consensus 491 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~ 567 (1255)
|+|||||+..||+|+++|||||+|||.+...+-+.|+++++ |.|+++|||+++++.. ||||+++.+|+|+.+|+++|
T Consensus 153 RvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~e 232 (263)
T COG1127 153 RVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEE 232 (263)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998865 8999999999999865 99999999999999999999
Q ss_pred Hhcc
Q 000846 568 LMNR 571 (1255)
Q Consensus 568 l~~~ 571 (1255)
+.+.
T Consensus 233 l~~s 236 (263)
T COG1127 233 LLAS 236 (263)
T ss_pred HHhC
Confidence 9875
No 121
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=5.7e-46 Score=397.75 Aligned_cols=214 Identities=35% Similarity=0.533 Sum_probs=189.6
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.++++|++|+|++ +++|+|+||++++||+++|+||||||||||+|+|+|+.+|.+|+|++||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 4789999999973 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCcc-CcccHHHHhccCCCCC-------C--H-HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHH
Q 000846 424 GLVNQEPVL-FATSITENILFGKDGA-------S--M-DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 424 ~~v~Q~~~l-~~~ti~~ni~~~~~~~-------~--~-~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri 492 (1255)
|||||++.. |.-||+|-+.+|+... + | +.+.++++..++.++. .+.-..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHHHHH
Confidence 999999754 5569999999986421 1 2 2355666666655554 344568999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhh-hhcCEEEEEeCCEEEEecChhHHh
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTI-RTANLIMVLKAGKVVESGSHNELM 569 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~-~~~d~i~vl~~G~i~~~g~~~~l~ 569 (1255)
.|||||+++|+||+||||||+||...+-.+++.++++. +|+|+|+|.|+++.. +.||++++|++|+++.+|+|+|++
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999985 389999999999986 679999999999999999999988
Q ss_pred cc
Q 000846 570 NR 571 (1255)
Q Consensus 570 ~~ 571 (1255)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 63
No 122
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-45 Score=403.58 Aligned_cols=235 Identities=55% Similarity=0.828 Sum_probs=217.8
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 578999999963 245999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 000846 1089 LVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSI 1168 (1255)
Q Consensus 1089 ~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~I 1168 (1255)
|+||+|.+|++|++||+.++.+..+++++.++++..++.+++..+|.|+++.+.....+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987665667778888888899999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHhh
Q 000846 1169 LLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKP 1247 (1255)
Q Consensus 1169 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~ 1247 (1255)
|||||||++||+++...+.+.|.+..+++|+|++||+++.+..||++++|++|++++.|+++++... .+.|..++..
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~--~~~~~~~~~~ 235 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK--GGLYAEMWKA 235 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc--ccHHHHHHhc
Confidence 9999999999999999999999988778899999999999988999999999999999999999764 6777776654
No 123
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-45 Score=410.09 Aligned_cols=215 Identities=34% Similarity=0.547 Sum_probs=191.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++||+++|++. .+|+|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.|||.++++++++. +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999732 2999999999999999999999999999999999999999999999999999998875 689
Q ss_pred EEeccCCccCcc-cHHHHhccCCCCC------CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDGA------SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
|+|+|++.||+. ||+|||.||.... .++++.++++..++.+.+++.| .+|||||||||||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999986 9999999986532 2445667777776666666655 699999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccCC
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRGE 573 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~~ 573 (1255)
||+++|++++||||+|+||++.+..+...|+++.+ |.|+|+||||..++. .+|||+||++|+|.+.|+|.|+..++.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999999988754 789999999998875 599999999999999999999987654
Q ss_pred C
Q 000846 574 G 574 (1255)
Q Consensus 574 ~ 574 (1255)
+
T Consensus 227 n 227 (338)
T COG3839 227 N 227 (338)
T ss_pred c
Confidence 3
No 124
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-45 Score=403.41 Aligned_cols=233 Identities=57% Similarity=0.901 Sum_probs=214.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|+++ +.++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999643 236999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 000846 1089 LVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSI 1168 (1255)
Q Consensus 1089 ~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~I 1168 (1255)
|+||+|.+|..|++||+.++.+..+.+++.+.++..++.+++..+|.|+++.++....+||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655556677777888899999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHH
Q 000846 1169 LLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSL 1244 (1255)
Q Consensus 1169 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l 1244 (1255)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++.. .+.|+.+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~ 233 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ--GGVYAKL 233 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc--Ccchhhh
Confidence 9999999999999999999999998888999999999999988999999999999999999999875 5656543
No 125
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=5.9e-45 Score=403.08 Aligned_cols=236 Identities=67% Similarity=1.016 Sum_probs=215.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|+...+.++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997432356999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 000846 1089 LVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSI 1168 (1255)
Q Consensus 1089 ~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~I 1168 (1255)
|+||+|.+|+.|++||+.++.+....+++.+.++..++.+++..+|.|+++.++....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999887655556677777888899999999999999999998999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHHHh
Q 000846 1169 LLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIK 1246 (1255)
Q Consensus 1169 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l~~ 1246 (1255)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++... .+.++.++.
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~~~ 236 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ--KGVYAKLVK 236 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc--ChhHHHHhh
Confidence 9999999999999999999999988778999999999999989999999999999999999999764 566666553
No 126
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.5e-45 Score=359.04 Aligned_cols=209 Identities=33% Similarity=0.564 Sum_probs=187.8
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|.+++|.|+|...+ -.++++|++||++||+||||||||||+++++||..|.+|+|.|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56889999996432 367899999999999999999999999999999999999999999999877664 45699
Q ss_pred EeccCCccCcc-cHHHHhccCCCC------CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHH
Q 000846 425 LVNQEPVLFAT-SITENILFGKDG------ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARA 497 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARa 497 (1255)
+++||..||.. ||++||.+|... ...+++..++..+++.++.+++|. +||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999987 999999998642 234568889999999999999985 899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 498 LIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 498 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
|+++-+||+||||+|+|||.-+..+...+.+++ ++.|+++|||+++.+. .+|+++++++|+|.++|+.+++.+.
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999999998874 4789999999999985 5999999999999999999998864
No 127
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-45 Score=399.95 Aligned_cols=227 Identities=50% Similarity=0.838 Sum_probs=212.3
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcc
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSH 1086 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1086 (1255)
|.|+++|++++|+. .+++++|+||++++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 46899999999963 2359999999999999999999999999999999999999999999999999998888889999
Q ss_pred eEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 000846 1087 IALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNP 1166 (1255)
Q Consensus 1087 i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p 1166 (1255)
++|+||++.+|++|++||+.++.+....+++.++++..++.+++..+|.|+++.++....+||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876655667788888889999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1167 SILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1167 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999998778999999999999988999999999999999999998764
No 128
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=8.5e-45 Score=401.54 Aligned_cols=234 Identities=51% Similarity=0.833 Sum_probs=212.4
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|+.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4789999999642 246999999999999999999999999999999999999999999999999998877778888999
Q ss_pred EeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCE
Q 000846 425 LVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKI 504 (1255)
Q Consensus 425 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~i 504 (1255)
|++|++++|+.|++||+.++......+++.++++..++.+++..+|.|+++..+..+.+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999986544455667777777888999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHHHH
Q 000846 505 LLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMV 581 (1255)
Q Consensus 505 lllDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 581 (1255)
+||||||++||+.+++.+.+.|+++.+|+|+|++||+++.+..||++++|++|++++.|+++++.++ .+.|..++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~~ 234 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE--NGLYAYLY 234 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc--cChHHHHH
Confidence 9999999999999999999999988778999999999999978999999999999999999998874 45565544
No 129
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.9e-45 Score=397.98 Aligned_cols=221 Identities=39% Similarity=0.602 Sum_probs=207.0
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcc
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSH 1086 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1086 (1255)
|.|+++|++++|+.. ++++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 468999999999742 3469999999999999999999999999999999999999999999999999998888889999
Q ss_pred eEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 000846 1087 IALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNP 1166 (1255)
Q Consensus 1087 i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p 1166 (1255)
++|+||+|.+|++|++||+.+... .+.+++.++++..++.+++..+|.|+++.+++.+.+||||||||++|||||+++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999986543 4677888999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCH
Q 000846 1167 SILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSH 1229 (1255)
Q Consensus 1167 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~ 1229 (1255)
++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 999999999999999999999999998778999999999999999999999999999998863
No 130
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-45 Score=375.61 Aligned_cols=223 Identities=35% Similarity=0.584 Sum_probs=189.3
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCC---HHHHh
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLH---LKWLR 420 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~r 420 (1255)
.|+++||+.+||+ ++.+|+||||+|++||++||+||||||||||+++|.|+.+|++|+|.++|.++..+. ...+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 5899999999984 457999999999999999999999999999999999999999999999999998876 55678
Q ss_pred cccEEeccCCccCcc-cHHHHhccCCCCCCH--HH---HHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHH
Q 000846 421 SQMGLVNQEPVLFAT-SITENILFGKDGASM--DD---VISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAI 494 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~--~~---~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~l 494 (1255)
++|||++|.+.|.+. ||.+|++.|+-.... .. .....+...+.+.++++ |+....-.+..+|||||+|||+|
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLerv--gi~~~A~qra~~LSGGQQQRVaI 158 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERV--GILDKAYQRASTLSGGQQQRVAI 158 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHc--CcHHHHHHHhccCCcchhHHHHH
Confidence 899999999999876 999999987642210 00 00011222233444554 55555666778999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 495 ARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 495 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
||||+++|+|+|-|||+|+|||.+.+.+++.|++.. .|.|+|+.-|+++.++ .||||+-|++|+|+.+|+++|+-.
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELTD 237 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhhH
Confidence 999999999999999999999999999999999874 4899999999999985 599999999999999999999643
No 131
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.2e-45 Score=361.46 Aligned_cols=207 Identities=31% Similarity=0.514 Sum_probs=186.0
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCC---HHHHhc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLH---LKWLRS 421 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~r~ 421 (1255)
|+|+||+++|+.. .++|+||||+|++||++-|+||||||||||+|+|.+...|+.|+|.++|+|+..+. ...+|+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 8999999999864 56999999999999999999999999999999999999999999999999998775 456899
Q ss_pred ccEEeccCCccCcc-cHHHHhccCCC------CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHH
Q 000846 422 QMGLVNQEPVLFAT-SITENILFGKD------GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAI 494 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~~-ti~~ni~~~~~------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~l 494 (1255)
+||+|+||..|... ||.||++|+.. ..-.+++.++++.+++.+-...+| .+|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 99999999988765 99999998643 112346778888888888888887 4899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecC
Q 000846 495 ARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGS 564 (1255)
Q Consensus 495 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~ 564 (1255)
|||++.+|++||-||||.+|||.....|++.+.++. .|.||++.||+.+.+.. --|++.+++|+++....
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 999999999999999999999999999999999885 49999999999999976 67899999999987654
No 132
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-42 Score=369.81 Aligned_cols=476 Identities=21% Similarity=0.280 Sum_probs=363.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChHHHHHHHHhhHHHHHHHHHHHHH
Q 000846 728 LSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMS 807 (1255)
Q Consensus 728 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~l~~rl~~D~~~i~~~~~~~l~ 807 (1255)
+...|.++.++..+.+.+........+++...++|.++.++++..|+.-+. +...++++.++++|+..+. +-...++
T Consensus 50 ~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerie--r~~~~rlla~L~~Dvr~IS-f~~s~lp 126 (546)
T COG4615 50 VLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIE--RLGSARLLAGLTSDVRNIS-FAFSRLP 126 (546)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH--Hhcccchhhhhccccccee-ehHhhhH
Confidence 344556666666777778888888999999999999999999999999887 6789999999999999998 5556778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHH
Q 000846 808 LLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQK 887 (1255)
Q Consensus 808 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIra~~~~~ 887 (1255)
.+.++.+.++++.+...++|+++.+++.+.+.+.+..-++.....-+.....++...+.....+-.+.|.+..+....-.
T Consensus 127 ~~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~ 206 (546)
T COG4615 127 ELVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERA 206 (546)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHH
Confidence 88999999999999999999999988887777776666665555555566778888888899999999999988765332
Q ss_pred H--HHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 000846 888 R--ILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAG 965 (1255)
Q Consensus 888 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 965 (1255)
+ +.+.|........+...+...+.......++.+.+....+.+|..... ++-+.....+..+.+++...++.++.
T Consensus 207 ~~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~---~w~st~~a~tivlvlLflr~pL~s~v 283 (546)
T COG4615 207 EYVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSL---GWASTNVAATIVLVLLFLRTPLLSAV 283 (546)
T ss_pred HHHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccchhhHHHHHHHHHHHHhhHHHHHH
Confidence 2 222222222222221111111211222334555555666666665443 33344444456677778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCccccccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcC
Q 000846 966 SMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQ 1045 (1255)
Q Consensus 966 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~ 1045 (1255)
...+.+..+..|.+++.++-..++..+-..++. .+.| ..||++||.|+|+. ..--+..||++|++||.|=|+|.
T Consensus 284 gilP~l~~AqvA~~kiakle~~~~~a~~~~~q~-~p~~---~~lelrnvrfay~~--~~FhvgPiNl~ikrGelvFliG~ 357 (546)
T COG4615 284 GILPTLLTAQVAFNKIAKLELAPYKADFPRPQA-FPDW---KTLELRNVRFAYQD--NAFHVGPINLTIKRGELVFLIGG 357 (546)
T ss_pred hhhhHHHHHHHHHHHHHHhhcCCccccCCCCCc-CCcc---cceeeeeeeeccCc--ccceecceeeEEecCcEEEEECC
Confidence 999999999999999999866443332222211 1123 35999999999974 22468999999999999999999
Q ss_pred CCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHHHhcCCC-CCCHHHHHHHHHHh
Q 000846 1046 SGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKA-DARESEIKKAAVLA 1124 (1255)
Q Consensus 1046 SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~-~~~~~ei~~al~~a 1124 (1255)
|||||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|+-|.+||+.++ |.. .++++.+.+-++.-
T Consensus 358 NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrL 431 (546)
T COG4615 358 NGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRL 431 (546)
T ss_pred CCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998754 322 36666665544444
Q ss_pred cHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEE
Q 000846 1125 NAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVV 1202 (1255)
Q Consensus 1125 ~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~I 1202 (1255)
.+..-. ++.+|== ....||-|||.|+|+--|++-+.+|++|||=.+--||.=.+...+.+-... .|||++.|
T Consensus 432 el~~kt-sl~d~~f-----s~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aI 505 (546)
T COG4615 432 ELAHKT-SLNDGRF-----SNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAI 505 (546)
T ss_pred HHhhhh-cccCCcc-----cccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEE
Confidence 333221 1222211 125799999999999999999999999999999999999999998876554 59999999
Q ss_pred ccCchhhhhcCEEEEEeCCEEEEec
Q 000846 1203 AHRLSTIQKSDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1203 aHrl~ti~~~D~I~Vl~~G~ive~G 1227 (1255)
||+-.-...|||++.|++|+++|.-
T Consensus 506 sHDd~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 506 SHDDHYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred ecCchhhhhHHHHHHHhcCceeecc
Confidence 9999999999999999999999863
No 133
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7e-45 Score=416.34 Aligned_cols=226 Identities=31% Similarity=0.492 Sum_probs=191.0
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH---Hh
Q 000846 1009 IELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ---LR 1084 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 1084 (1255)
|+++||+++|++.. +.++|+||||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996321 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cceEEEccCCCCCc-ccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHH
Q 000846 1085 SHIALVSQEPTLFA-GTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~-gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrla 1157 (1255)
++|+||||++.+|. .|++||+.++.. ..+. +++.++++.+++.++.. ....+||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~-----------~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHD-----------SYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 89999999999995 799999987532 2222 33455555555544432 345689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||||+.+|+|||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+++|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999999754 7899999999999965 99999999999999999999987
Q ss_pred hhcCchh-HHHHh
Q 000846 1235 LSRGGAY-YSLIK 1246 (1255)
Q Consensus 1235 ~~~~g~y-~~l~~ 1246 (1255)
. +...+ ..++.
T Consensus 231 ~-p~~~~~~~~~~ 242 (343)
T TIGR02314 231 H-PKTPLAQKFIR 242 (343)
T ss_pred C-CCcHHHHHHHh
Confidence 4 33333 44443
No 134
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-45 Score=410.51 Aligned_cols=215 Identities=32% Similarity=0.537 Sum_probs=190.9
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcc
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQ 422 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 422 (1255)
..|+++||+++|+ +..+++|+||+|++||+++|+|||||||||+|++|+||..|++|+|.+||+++.+++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3699999999997 35799999999999999999999999999999999999999999999999999998876 568
Q ss_pred cEEeccCCccCcc-cHHHHhccCCC-C--CCH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHH
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKD-G--ASM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAI 494 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~-~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~l 494 (1255)
||+|+|+..||+. ||+|||.||.. . ... +++.++++.+++.++-.+. ..+|||||+|||||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----------p~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRK-----------PHQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhC-----------hhhhChHHHHHHHH
Confidence 9999999999986 99999999975 1 122 2566666666666655544 46999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhh-hhcCEEEEEeCCEEEEecChhHHhcc
Q 000846 495 ARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTI-RTANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 495 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~-~~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
||||..+|++||||||.||||.+-+..++..++++.+ |.|.|+|||+-++. ..+|||+||++|+|...|+|+|+..+
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 9999999999999999999999999999999988743 89999999999986 66999999999999999999999876
Q ss_pred CC
Q 000846 572 GE 573 (1255)
Q Consensus 572 ~~ 573 (1255)
+.
T Consensus 228 P~ 229 (352)
T COG3842 228 PA 229 (352)
T ss_pred cc
Confidence 43
No 135
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=8.6e-45 Score=388.66 Aligned_cols=214 Identities=33% Similarity=0.523 Sum_probs=192.9
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.++++|++|+|+ ++++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 378999999996 34799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCC-CCcccHHHHHhcCCCC----------CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1088 ALVSQEPT-LFAGTIRENIAYGKAD----------ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1088 ~~V~Qdp~-LF~gTIreNl~~g~~~----------~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
+||||++. -|.-|++|=+.+|+-. .+.+.+.+|++..++.++... .-..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-----------~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-----------PVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-----------cccccChhHHHHH
Confidence 99999964 5677999999988521 123357888999999888543 2346999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhh-hhcCEEEEEeCCEEEEecCHHHHH
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTI-QKSDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
.|||||.++|+||+||||||+||....-.|++.+++.. +|+|+|+|.|+++.. +.||++++|++|+++..|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999986 479999999999875 679999999999999999999998
Q ss_pred hh
Q 000846 1234 AL 1235 (1255)
Q Consensus 1234 ~~ 1235 (1255)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 64
No 136
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-45 Score=380.15 Aligned_cols=195 Identities=32% Similarity=0.486 Sum_probs=168.0
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.+++++|+++|+. ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.++..- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999974 5699999999999999999999999999999999999999999999999887432 4579
Q ss_pred EEeccCCccCc-ccHHHHhccCCCCCC------HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 424 GLVNQEPVLFA-TSITENILFGKDGAS------MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 424 ~~v~Q~~~l~~-~ti~~ni~~~~~~~~------~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
+||+|++.||+ -||+||+.++.+... .+.+.+.++.+++.+|- +..+.+|||||||||||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~-----------~~~P~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFE-----------DKYPHQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchh-----------hcCccccChHHHHHHHHHH
Confidence 99999999998 499999999875321 22344444555554444 4445699999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhh-hhcCEEEEEeCC
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTI-RTANLIMVLKAG 557 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~-~~~d~i~vl~~G 557 (1255)
||+.+|+||+||||++|||+.|+..+++.+.++. .++|+++|||++++. .-+|||+||.++
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999999999998874 379999999999986 559999999984
No 137
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-44 Score=373.46 Aligned_cols=226 Identities=31% Similarity=0.470 Sum_probs=188.4
Q ss_pred cEEEEEEEEECCCCCC-CccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCC-HHHHhc
Q 000846 1008 RIELKNVFFAYPTRPD-QMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYN-LKQLRS 1085 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~-~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~lR~ 1085 (1255)
-++++|+++.|+.+.. .++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.+..... ....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 3889999999974321 15999999999999999999999999999999999999999999999997765433 346788
Q ss_pred ceEEEccCCC--CC-cccHHHHHhcCC----CCCCHHHHHHHHHHhcHHH-HHHccccccccccCCCCCCCChHHHHHHH
Q 000846 1086 HIALVSQEPT--LF-AGTIRENIAYGK----ADARESEIKKAAVLANAHE-FISGMKDGYDTYCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1086 ~i~~V~Qdp~--LF-~gTIreNl~~g~----~~~~~~ei~~al~~a~l~~-~i~~lp~gldt~vge~G~~LSgGQkQrla 1157 (1255)
.+.+|+|||. |= .-||++-|.=+. -+-.+++++++++.+++.+ |... ...+||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R-----------~P~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDR-----------RPHELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhc-----------CchhcChhHHHHHH
Confidence 9999999996 22 247777763111 1223456888888888744 3333 34679999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCC--CeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMG--RTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~--~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||||.-+|++||||||||+||.-..+.|++.+.+..++ -|.|+|||++..+.. ||||+||++|+++|.++-.++++
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999999999998764 499999999999976 99999999999999999999987
Q ss_pred hhcCchhHHHH
Q 000846 1235 LSRGGAYYSLI 1245 (1255)
Q Consensus 1235 ~~~~g~y~~l~ 1245 (1255)
. +...|.+..
T Consensus 232 ~-~~h~ytr~L 241 (252)
T COG1124 232 H-PSHPYTREL 241 (252)
T ss_pred C-CccHHHHHH
Confidence 5 566676643
No 138
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-44 Score=408.86 Aligned_cols=220 Identities=29% Similarity=0.524 Sum_probs=187.7
Q ss_pred cEEEEEEEEECCCCC--CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCC-------
Q 000846 1008 RIELKNVFFAYPTRP--DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNY------- 1078 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~--~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i------- 1078 (1255)
.|+++||+|+|+... +.++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999997421 24699999999999999999999999999999999999999999999999998653
Q ss_pred ---------CHHHHhcceEEEccCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccc-cccCCC
Q 000846 1079 ---------NLKQLRSHIALVSQEP--TLFAGTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYD-TYCGER 1144 (1255)
Q Consensus 1079 ---------~~~~lR~~i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gld-t~vge~ 1144 (1255)
+...+|++|+||+|+| .+|+.|++||+.++.. ..+.++..+ .+.+++..+ |++ ...+..
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK-----LAKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCChhHhcCC
Confidence 3567899999999998 6999999999988632 233333322 123444444 554 446777
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhh-hhcCEEEEEeCCE
Q 000846 1145 GVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTI-QKSDTIAVIKNGR 1222 (1255)
Q Consensus 1145 G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti-~~~D~I~Vl~~G~ 1222 (1255)
+.+||||||||++|||||+++|+||||||||++||+.+++.+.+.|++.. +++|+|+|||+++.+ ..||+|+||++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 88999999999999999999999999999999999999999999998864 589999999999987 5699999999999
Q ss_pred EEEecCHHHHHh
Q 000846 1223 VVEQGSHNELVA 1234 (1255)
Q Consensus 1223 ive~G~~~eLl~ 1234 (1255)
+++.|+|++++.
T Consensus 254 i~~~g~~~~~~~ 265 (320)
T PRK13631 254 ILKTGTPYEIFT 265 (320)
T ss_pred EEEeCCHHHHhc
Confidence 999999998754
No 139
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-44 Score=369.59 Aligned_cols=225 Identities=32% Similarity=0.544 Sum_probs=192.8
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHH---HHh
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLK---QLR 1084 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 1084 (1255)
.|++++|+++|. ++.||+||||+|++||.+||+|+||||||||++++.|+..|++|+|.++|.|+.+++-+ .+|
T Consensus 8 ~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 599999999996 34699999999999999999999999999999999999999999999999999998864 569
Q ss_pred cceEEEccCCCCCcc-cHHHHHhcCCC---CCCHHHHHH----HHHHhcHHHHHHcccccccccc-CCCCCCCChHHHHH
Q 000846 1085 SHIALVSQEPTLFAG-TIRENIAYGKA---DARESEIKK----AAVLANAHEFISGMKDGYDTYC-GERGVQLSGGQKQR 1155 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~g-TIreNl~~g~~---~~~~~ei~~----al~~a~l~~~i~~lp~gldt~v-ge~G~~LSgGQkQr 1155 (1255)
+++|+++|+-.||+. ||+||+.|... +.+++++.+ .++.+| |...+ .--.+.||||.+.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VG-----------L~~~~~~~~PsELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVG-----------LRGAAADLYPSELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcC-----------CChhhhhhCchhhcchHHHH
Confidence 999999999999975 99999987633 334444433 223333 33331 12357899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1156 IALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1156 lalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
+||||||.-+|+||++|||||+|||.+...+-+.|+++.+ +.|+++|||+++++.. ||||+++.+|+|+..|+++||
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999988754 8899999999999876 799999999999999999999
Q ss_pred HhhhcCchhHHHHhh
Q 000846 1233 VALSRGGAYYSLIKP 1247 (1255)
Q Consensus 1233 l~~~~~g~y~~l~~~ 1247 (1255)
.+. .+.+.++.++-
T Consensus 234 ~~s-d~P~v~qf~~G 247 (263)
T COG1127 234 LAS-DDPWVRQFFNG 247 (263)
T ss_pred HhC-CCHHHHHHhcC
Confidence 985 56666666543
No 140
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=8.6e-44 Score=397.26 Aligned_cols=240 Identities=33% Similarity=0.536 Sum_probs=216.0
Q ss_pred CccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHH
Q 000846 340 YVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWL 419 (1255)
Q Consensus 340 ~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~ 419 (1255)
...+.|+++|++++|+.. +..+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.+.+...+
T Consensus 15 ~~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 93 (257)
T cd03288 15 GLGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTL 93 (257)
T ss_pred cCCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHH
Confidence 346789999999999742 2469999999999999999999999999999999999999999999999999988888888
Q ss_pred hcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 420 RSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 420 r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
++.++||+|+|.+|++|++||+..... ...+++.++.+..++.+.+..+|.|+++.+++.+.+||||||||++||||++
T Consensus 94 ~~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 94 RSRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred hhhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999975422 2345677777888899999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhccCCCChhHH
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQ 579 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 579 (1255)
++|++|||||||++||+++++.+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+. ..+.|..
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~-~~~~~~~ 251 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQ-EDGVFAS 251 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhc-cchHHHH
Confidence 999999999999999999999999999988778999999999999988999999999999999999999764 3445655
Q ss_pred HHH
Q 000846 580 MVE 582 (1255)
Q Consensus 580 ~~~ 582 (1255)
++.
T Consensus 252 ~~~ 254 (257)
T cd03288 252 LVR 254 (257)
T ss_pred HHh
Confidence 543
No 141
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=6.6e-44 Score=389.96 Aligned_cols=220 Identities=45% Similarity=0.735 Sum_probs=203.0
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcc
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSH 1086 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1086 (1255)
|.|+++|++++|+.. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999642 2469999999999999999999999999999999999999999999999999988887788899
Q ss_pred eEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 000846 1087 IALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNP 1166 (1255)
Q Consensus 1087 i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p 1166 (1255)
++|+||+|.+|..|++||+.++.+..+.+++.+.++..++.+.+..+|.|++|.+.+...+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999899999998765544566778888899999999999999999999889999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000846 1167 SILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1167 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G 1227 (1255)
++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999987668999999999988889999999999998765
No 142
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-44 Score=387.11 Aligned_cols=215 Identities=36% Similarity=0.610 Sum_probs=194.2
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecC-CCCHHHHhcc
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIR-NYNLKQLRSH 1086 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~~~~lR~~ 1086 (1255)
.|+++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.+++ ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999854 57999999999999999999999999999999999999999999999999998 4888999999
Q ss_pred eEEEccCC--CCCcccHHHHHhcCCC--CCCHH----HHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHH
Q 000846 1087 IALVSQEP--TLFAGTIRENIAYGKA--DARES----EIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIAL 1158 (1255)
Q Consensus 1087 i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlal 1158 (1255)
+|+|+|+| .+|..||.|.++||.. ..+.+ .+.++++.+++.++.. ....+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~-----------r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLD-----------RPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhcc-----------CCccccCCcceeeHHh
Confidence 99999999 7999999999999854 33443 4566677777766532 3456899999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1159 ARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1159 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
|.+|..+|+|||||||||+||+...+.+.+.++++.+ ++|+|+|||+++.+.. |||++||++|+++.+|+|++++++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999864 4799999999999988 999999999999999999999875
No 143
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.4e-44 Score=375.67 Aligned_cols=210 Identities=36% Similarity=0.536 Sum_probs=173.3
Q ss_pred EEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH----H
Q 000846 345 IEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW----L 419 (1255)
Q Consensus 345 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~----~ 419 (1255)
++++||++.|.... ...+|+++||+|++||+++|+||||||||||+++|.|+..|++|+|.++|.|+..++.+. .
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 246999999999999999999999999999999999999999999999999999887432 3
Q ss_pred hcccEEeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhc-CCCCCCChHHHHHHHHH
Q 000846 420 RSQMGLVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVG-QLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 420 r~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~-~~g~~LSgGqrqri~lA 495 (1255)
|++||||+|+..|++. |++|||.++.. .....+.. ..+.+.++.+ |+..... ..+.+||||||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~-----~~~~~l~~~l--gl~~~~~~~~p~eLSGGqqQRVAIA 154 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRK-----RAAEELLEVL--GLEDRLLKKKPSELSGGQQQRVAIA 154 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHH-----HHHHHHHHhc--CChhhhccCCchhcCHHHHHHHHHH
Confidence 5679999999999876 99999986421 11111111 1112223333 4543333 55679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhhcCEEEEEeCCEEEE
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRTANLIMVLKAGKVVE 561 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~ 561 (1255)
|||+.+|+|++.||||++||.++.+.|.+.++++. .|+|+|+|||+......|||++.|++|++..
T Consensus 155 RAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 155 RALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999884 3899999999999999999999999999543
No 144
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.8e-44 Score=397.51 Aligned_cols=194 Identities=27% Similarity=0.372 Sum_probs=161.0
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcc
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSH 1086 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1086 (1255)
..+++.+|+|.|+..+ .+.+.+++++++.-+++++||++|+||||+++++.+-..|..|.+-+.+ |.+
T Consensus 361 p~l~i~~V~f~y~p~~-y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSE-YQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CeeEEEeeeccCCCcc-hhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 3699999999996432 2789999999999999999999999999999999999999999998876 789
Q ss_pred eEEEccCCCCC-cccHH--HHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCC-CCCChHHHHHHHHHHHH
Q 000846 1087 IALVSQEPTLF-AGTIR--ENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERG-VQLSGGQKQRIALARAI 1162 (1255)
Q Consensus 1087 i~~V~Qdp~LF-~gTIr--eNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G-~~LSgGQkQrlalARAL 1162 (1255)
|+|-.|.-+=| +-.+- +-+.--.|..+++|+.+.|...|+ +.++.-.. ..||||||=|+++|-..
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl-----------~g~la~~si~~LSGGQKsrvafA~~~ 497 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGL-----------SGELALQSIASLSGGQKSRVAFAACT 497 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCC-----------CchhhhccccccCCcchhHHHHHHHh
Confidence 99999987633 22221 111112345589999888776654 44333333 56999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000846 1163 LKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVE 1225 (1255)
Q Consensus 1163 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive 1225 (1255)
..+|.+|+|||||..||.++-..+-++|+.. +.-||+|||+.+.+.. |+.++|.++|+|..
T Consensus 498 ~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 498 WNNPHLLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred cCCCcEEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 9999999999999999999999999999876 3479999999999976 99999999999976
No 145
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-44 Score=370.04 Aligned_cols=217 Identities=32% Similarity=0.497 Sum_probs=182.5
Q ss_pred eEEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCC-CHHHHhc
Q 000846 344 EIEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRL-HLKWLRS 421 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~-~~~~~r~ 421 (1255)
.++++|+++.|+.+. ..++|+||||+|++||+++|||+||||||||.++|+|+.+|++|+|+++|.++... ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997532 12599999999999999999999999999999999999999999999999877654 3457788
Q ss_pred ccEEeccCCc--cCcc-cHHHHhccCCC----CCCHHHHHHHHHHhchH-HHHhcCCCcccchhcCCCCCCChHHHHHHH
Q 000846 422 QMGLVNQEPV--LFAT-SITENILFGKD----GASMDDVISAAKAANAH-DFITKLPDGYETQVGQLGFQMSGGQKQRIA 493 (1255)
Q Consensus 422 ~i~~v~Q~~~--l~~~-ti~~ni~~~~~----~~~~~~~~~~~~~~~~~-~~i~~l~~g~~t~~~~~g~~LSgGqrqri~ 493 (1255)
.|-+|+|||. |-+- ||++-|.-+.. +...+++.++++.+++. +++.+ ...+||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R-----------~P~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDR-----------RPHELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhc-----------CchhcChhHHHHHH
Confidence 9999999995 4333 88877753322 12234466666666653 23444 44689999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000846 494 IARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 494 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|||||.-+|++||||||||+||+..+..|++.+.++++ +-|.|+|||++..+.+ ||||+||++|+++|.++..++.+
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999999998876 5699999999999976 99999999999999999999987
Q ss_pred c
Q 000846 571 R 571 (1255)
Q Consensus 571 ~ 571 (1255)
.
T Consensus 232 ~ 232 (252)
T COG1124 232 H 232 (252)
T ss_pred C
Confidence 6
No 146
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-44 Score=399.66 Aligned_cols=217 Identities=34% Similarity=0.567 Sum_probs=194.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|... .+|+|+||+|+.||.++|+|||||||||++++|.||.+|++|+|+|||.|+.++++++ +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999632 2999999999999999999999999999999999999999999999999999999876 899
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFAG-TIRENIAYGKAD------ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1088 ~~V~Qdp~LF~g-TIreNl~~g~~~------~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
++|+|++.||.. ||+|||.|+... --++++.++++..++.++++..| .+||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999975 999999998542 22567788888888888776655 579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHhhhc
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVALSR 1237 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~~~~ 1237 (1255)
||+++|++++||||.|+||......+...|+++.+ +.|+|.|||+-..+. -+|||+||.+|+|.+.|+|.|+..+ +
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~-P 225 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYER-P 225 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhC-c
Confidence 99999999999999999999999999999988654 689999999988765 5999999999999999999999976 5
Q ss_pred Cchh
Q 000846 1238 GGAY 1241 (1255)
Q Consensus 1238 ~g~y 1241 (1255)
.+.|
T Consensus 226 ~n~f 229 (338)
T COG3839 226 ANLF 229 (338)
T ss_pred cchh
Confidence 5544
No 147
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.3e-44 Score=356.01 Aligned_cols=208 Identities=30% Similarity=0.481 Sum_probs=186.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHH---HHhc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLK---QLRS 1085 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR~ 1085 (1255)
|+|+||+.+|+.. +++|+||||+|++||.+=++|||||||||++++|++...|++|+|.++|.|++.+.-. -||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 8999999999854 5799999999999999999999999999999999999999999999999999887754 5899
Q ss_pred ceEEEccCCCCCc-ccHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHH
Q 000846 1086 HIALVSQEPTLFA-GTIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIAL 1158 (1255)
Q Consensus 1086 ~i~~V~Qdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlal 1158 (1255)
+||+|+||..|.. -|+.||++|+.. ..+ .+++.++++.+|+.+-...+| .+|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 9999999998765 599999987642 122 356778889999888887777 4799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhc-CEEEEEeCCEEEEecCH
Q 000846 1159 ARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQKS-DTIAVIKNGRVVEQGSH 1229 (1255)
Q Consensus 1159 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~-D~I~Vl~~G~ive~G~~ 1229 (1255)
|||++.+|++||-||||-+|||++...|++.+.+.- .|.||++.||+.+.+..+ -|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999998874 699999999999999875 67999999999987654
No 148
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-43 Score=390.47 Aligned_cols=226 Identities=52% Similarity=0.883 Sum_probs=209.0
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcc
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQ 422 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 422 (1255)
++|+++|++++|++. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~--~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDEK--KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCCC--CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 368999999999632 359999999999999999999999999999999999999999999999999988777788899
Q ss_pred cEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCC
Q 000846 423 MGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDP 502 (1255)
Q Consensus 423 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~ 502 (1255)
++|++|++.+|.+|++||+.++.+....+++.++++..++.++++.+|.|+++.++....+||||||||++|||||+.+|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876555566777778888899999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 503 KILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 503 ~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++.+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999999999998877899999999999988899999999999999999888765
No 149
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-44 Score=367.11 Aligned_cols=223 Identities=32% Similarity=0.501 Sum_probs=194.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCC---HHHHh
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYN---LKQLR 1084 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~lR 1084 (1255)
.|+++||+.+||+ ++.+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|.++|.++..+. +..+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 467999999999999999999999999999999999999999999999999999888 66788
Q ss_pred cceEEEccCCCCCc-ccHHHHHhcCCCC-----------CCH---HHHHHHHHHhcHHHHHHccccccccccCCCCCCCC
Q 000846 1085 SHIALVSQEPTLFA-GTIRENIAYGKAD-----------ARE---SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLS 1149 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~-gTIreNl~~g~~~-----------~~~---~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1149 (1255)
++||+|+|.+.|-. -|+.+|+..|.-. .+. ....+|++.+++.+... .+..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~-----------qra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAY-----------QRASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHH-----------HHhccCC
Confidence 99999999999876 5999999877532 222 34566777777776642 3457899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEe
Q 000846 1150 GGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQ 1226 (1255)
Q Consensus 1150 gGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~ 1226 (1255)
|||+||++|||||..+|+|+|-|||+|+|||.+.+.|++.|++.. .|.|+|+.-|.++..++ ||||+=|++|+|+-+
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999875 58999999999999876 999999999999999
Q ss_pred cCHHHHHhhhcCchhHHHHhh
Q 000846 1227 GSHNELVALSRGGAYYSLIKP 1247 (1255)
Q Consensus 1227 G~~~eLl~~~~~g~y~~l~~~ 1247 (1255)
|+++||- +..+.+.|..
T Consensus 230 g~~~el~----~~~~~~iYg~ 246 (258)
T COG3638 230 GPASELT----DEALDEIYGN 246 (258)
T ss_pred CChhhhh----HHHHHHHhcc
Confidence 9999973 3345555543
No 150
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.1e-44 Score=408.57 Aligned_cols=230 Identities=29% Similarity=0.513 Sum_probs=190.1
Q ss_pred EEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH---Hh
Q 000846 345 IEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW---LR 420 (1255)
Q Consensus 345 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~r 420 (1255)
|+++||+++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++..++... .|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 246999999999999999999999999999999999999999999999999998876543 57
Q ss_pred cccEEeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHH
Q 000846 421 SQMGLVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARA 497 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARa 497 (1255)
++||||+|++.+|. .|++||+.++.. ....++..+ .+.+.++.+ |+.......+.+|||||||||+||||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IARA 154 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR-----KVTELLALV--GLGDKHDSYPSNLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999996 599999987642 122222111 112333333 44444556667999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhccCCC
Q 000846 498 LIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNRGEG 574 (1255)
Q Consensus 498 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~ 574 (1255)
|+.+|++||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|++++++..+..
T Consensus 155 L~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~ 234 (343)
T TIGR02314 155 LASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKT 234 (343)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCc
Confidence 9999999999999999999999999999998853 8999999999999865 999999999999999999999875433
Q ss_pred ChhHHHH
Q 000846 575 GEYYQMV 581 (1255)
Q Consensus 575 ~~~~~~~ 581 (1255)
.....+.
T Consensus 235 ~~~~~~~ 241 (343)
T TIGR02314 235 PLAQKFI 241 (343)
T ss_pred HHHHHHH
Confidence 3334443
No 151
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.6e-43 Score=391.55 Aligned_cols=226 Identities=67% Similarity=1.061 Sum_probs=206.4
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|+++.|++..+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+....+++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 46899999997533356999999999999999999999999999999999999999999999999988777777788899
Q ss_pred EeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCE
Q 000846 425 LVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKI 504 (1255)
Q Consensus 425 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~i 504 (1255)
|++|++.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999987654455566666777788889999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 505 LLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 505 lllDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+||||||++||+.+++.+.+.|+++.+|+|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA 226 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh
Confidence 999999999999999999999988777899999999999988899999999999999999988875
No 152
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-43 Score=390.40 Aligned_cols=226 Identities=54% Similarity=0.905 Sum_probs=207.6
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|++. ..++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999743 236999999999999999999999999999999999999999999999999998777777888999
Q ss_pred EeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCE
Q 000846 425 LVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKI 504 (1255)
Q Consensus 425 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~i 504 (1255)
|++|++.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987654455666677777888999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhcc
Q 000846 505 LLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 505 lllDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
+||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 9999999999999999999999998778999999999999978999999999999999999998763
No 153
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=2e-40 Score=389.66 Aligned_cols=473 Identities=17% Similarity=0.145 Sum_probs=352.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCC---CChHHHHHHHHhhHHHHHHHHHHH
Q 000846 729 SLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQED---NTSAAICARLATEANVVRSLVGDR 805 (1255)
Q Consensus 729 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~---~~~G~l~~rl~~D~~~i~~~~~~~ 805 (1255)
...|.+++.+..+....+.|+-.....++..-+-+.+.++-+...-.|+.... +.+-..=+|+..|+...-+.....
T Consensus 89 l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l 168 (604)
T COG4178 89 LQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDL 168 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHH
Confidence 34556666666777777888888888888888888888888877744443111 111123478889988887766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 806 MSLLVQAIFGSVFSYIVGLVLSW---------------RLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLA 870 (1255)
Q Consensus 806 l~~~~~~~~~~i~~~~~~~~~~~---------------~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (1255)
...++.++++++...+++.-.+- .+.+++++.+++.-...+...+.+.+...+..+..+......
T Consensus 169 ~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~L 248 (604)
T COG4178 169 SFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSL 248 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHH
Confidence 66677776666665555553222 222222222332222222333334444444444555555556
Q ss_pred HHHHcchHHHHHhccHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Q 000846 871 SEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQA 950 (1255)
Q Consensus 871 ~e~l~g~~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~ 950 (1255)
.-.-++.+.|-.|+.|+...++..+..+...+...+..........+......++.++-+..++-....|.+++|+++++
T Consensus 249 vrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa 328 (604)
T COG4178 249 VRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQA 328 (604)
T ss_pred HHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHH
Confidence 66677888999999999888887777766666555544444444555555555555556666777788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccC--CCCCCCCCC--ccccc--cccccEEEEEEEEECCCCCCC
Q 000846 951 FLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRS--EIDPDSPQG--RDIKR--QMRGRIELKNVFFAYPTRPDQ 1024 (1255)
Q Consensus 951 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~--~~~~~~~~~--~~~~~--~~~g~I~~~~Vsf~Y~~~~~~ 1024 (1255)
..++..+...++.+....+.+....+...|+.++.+.-. +.+...+.. ..... ..+..|+|+|++..-|.. .
T Consensus 329 ~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~--~ 406 (604)
T COG4178 329 VGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG--Q 406 (604)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--C
Confidence 999999999999999999999999999999998875322 111111111 00000 014679999999999853 4
Q ss_pred ccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcccHHHH
Q 000846 1025 MILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIREN 1104 (1255)
Q Consensus 1025 ~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreN 1104 (1255)
+.|+++||.|+|||.+-|.|+||||||||+++|.|+++--+|+|.+-. -..+-|+||.|++-.||+||-
T Consensus 407 ~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre~ 475 (604)
T COG4178 407 TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLREA 475 (604)
T ss_pred eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHHHH
Confidence 689999999999999999999999999999999999999999987751 135789999999999999999
Q ss_pred HhcCCCC--CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHH
Q 000846 1105 IAYGKAD--ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVS 1182 (1255)
Q Consensus 1105 l~~g~~~--~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~t 1182 (1255)
|+|+++. .+|+++.+++.++++.+++.++.+ . ..-...||+|||||||+||.|+++|++++|||||||||+++
T Consensus 476 l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~----~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~ 550 (604)
T COG4178 476 LCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-E----DRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEET 550 (604)
T ss_pred HhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-c----CcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHH
Confidence 9999763 899999999999999999998753 2 22456899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEe
Q 000846 1183 ESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIK 1219 (1255)
Q Consensus 1183 e~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~ 1219 (1255)
|..+.+.+++...+.|+|.|+||.....-.++.+-++
T Consensus 551 e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 551 EDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 9999999999999999999999999888888777664
No 154
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-44 Score=382.86 Aligned_cols=215 Identities=37% Similarity=0.631 Sum_probs=191.1
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecC-CCCHHHHhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIR-RLHLKWLRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~-~~~~~~~r~~ 422 (1255)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48899999999864 57999999999999999999999999999999999999999999999999998 4788899999
Q ss_pred cEEeccCC--ccCcccHHHHhccCCCC--CCHHH----HHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHH
Q 000846 423 MGLVNQEP--VLFATSITENILFGKDG--ASMDD----VISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAI 494 (1255)
Q Consensus 423 i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~l 494 (1255)
+|||+|+| .+|..||.|.++||..+ .+.++ +.++++.+++.++. .....+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~-----------~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELL-----------DRPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhc-----------cCCccccCCcceeeHHh
Confidence 99999999 78999999999999653 23333 44555555555543 44457999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhcc
Q 000846 495 ARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 495 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
|.+|..+|++||||||||+||+...+.+.+.++++.+ |+|+|++||+++.+.. ||++++|++|+++.+|+|.++.++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999854 5899999999999865 999999999999999999998764
No 155
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-43 Score=390.00 Aligned_cols=224 Identities=54% Similarity=0.864 Sum_probs=207.5
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999632 35999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCE
Q 000846 425 LVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKI 504 (1255)
Q Consensus 425 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~i 504 (1255)
|++|++.+|+.|++||+.++....+.+++.+.++..++.+.+..+|.|+++.+..++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655556667777788888899999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 505 LLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 505 lllDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+||||||++||+++.+.+.+.|.++.+|+|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~ 224 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA 224 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999999999999998866899999999999998899999999999999999988876
No 156
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=6.4e-44 Score=347.58 Aligned_cols=209 Identities=32% Similarity=0.537 Sum_probs=188.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|.+++|.|+|.+.+ =..+++|++||+|||+||||||||||++++.||..|.+|+|+|||+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56889999996432 358899999999999999999999999999999999999999999999877663 46799
Q ss_pred EEccCCCCCcc-cHHHHHhcCC-C-----CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGK-A-----DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~-~-----~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
+++||..||.- ||++|+.+|. | ....+.+..++..+|+.+|...||. +||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999985 9999999985 3 1234678899999999999999883 699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
|+|+.|||+||||.|+|||.-...+...+.+.. ++.|+++|||.++.++. +|+++++++|||.+.|.-+++++.
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999999998876 47899999999998855 999999999999999999999875
No 157
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-43 Score=377.38 Aligned_cols=218 Identities=28% Similarity=0.476 Sum_probs=190.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++|++|+|.++ +||+||||+|++|+.+||+||||||||||+++++|+.+|++|+|.++|.++++... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 49999999999632 59999999999999999999999999999999999999999999999998876432 5789
Q ss_pred EEEccCC---CCCcccHHHHHhcCCCC----------CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHH
Q 000846 1088 ALVSQEP---TLFAGTIRENIAYGKAD----------ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQ 1154 (1255)
Q Consensus 1088 ~~V~Qdp---~LF~gTIreNl~~g~~~----------~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQ 1154 (1255)
|||||.. .=|.-||+|=+.+|... .+.+++.+|++.+++.++.. -++| .|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~-------r~i~----~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRD-------RQIG----ELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhC-------Cccc----ccCcHHHH
Confidence 9999965 35788999999887431 12478999999999998853 3455 49999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1155 RIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM-GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1155 rlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
|+.|||||+.+|++|+|||||+++|+.++..|.+.|+++.+ ||||++|+|+++.+.. +|+|+.| |+++...|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhc
Confidence 99999999999999999999999999999999999999874 8999999999999865 9999988 6789999999999
Q ss_pred HhhhcCchhHHHHh
Q 000846 1233 VALSRGGAYYSLIK 1246 (1255)
Q Consensus 1233 l~~~~~g~y~~l~~ 1246 (1255)
+.. ..+.+.+.
T Consensus 226 ~~~---~~l~~~~g 236 (254)
T COG1121 226 LTE---ENLEKAFG 236 (254)
T ss_pred cCH---HHHHHHhC
Confidence 763 34554444
No 158
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.8e-43 Score=370.97 Aligned_cols=207 Identities=35% Similarity=0.506 Sum_probs=172.4
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH---H-
Q 000846 1009 IELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ---L- 1083 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---l- 1083 (1255)
++++||+..|.... ..++|+++||+|++||.|||+||||||||||+++|.++-.|++|+|.++|.|+..++-+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999996432 246999999999999999999999999999999999999999999999999999998533 3
Q ss_pred hcceEEEccCCCCCc-ccHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1084 RSHIALVSQEPTLFA-GTIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1084 R~~i~~V~Qdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
|++||+|+|+..|++ -|++||+.++.. ... .+...+.++..++.+... .....+||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 567999999999886 599999975311 111 223333333334433221 134678999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQKSDTIAVIKNGRVVE 1225 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive 1225 (1255)
||||||+.+|+|++.||||.+||++|.+.|.+.+++.. .|+|+|+|||+......|||++.|.+|++.+
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999984 3789999999999999999999999999543
No 159
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.3e-43 Score=384.69 Aligned_cols=220 Identities=38% Similarity=0.602 Sum_probs=204.2
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcc
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQ 422 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 422 (1255)
|.|+++|++++|+.. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 468999999999743 2469999999999999999999999999999999999999999999999999988888888999
Q ss_pred cEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCC
Q 000846 423 MGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDP 502 (1255)
Q Consensus 423 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~ 502 (1255)
++|++|+|.+++.|++||+.+.. ....+++.++++..++.+++..+|.|+++..++.+.+||||||||++|||||+.+|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFG-EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCC-CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998654 34567788888889999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecC
Q 000846 503 KILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGS 564 (1255)
Q Consensus 503 ~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~ 564 (1255)
+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999998877899999999999998899999999999998875
No 160
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.5e-43 Score=388.62 Aligned_cols=219 Identities=51% Similarity=0.835 Sum_probs=199.8
Q ss_pred ccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHh
Q 000846 1005 MRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLR 1084 (1255)
Q Consensus 1005 ~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR 1084 (1255)
..+.|+++|++++|+++.+.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45679999999999753234699999999999999999999999999999999999999999999999999888878888
Q ss_pred cceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 000846 1085 SHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILK 1164 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr 1164 (1255)
++++|+||+|.+|++|++||+.++......+++.+..+..++++++..+|.|+++.+.+...+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999987654444555666666778889999999999999999999999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000846 1165 NPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRV 1223 (1255)
Q Consensus 1165 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~i 1223 (1255)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999998778999999999999988999999999975
No 161
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-43 Score=391.13 Aligned_cols=213 Identities=32% Similarity=0.537 Sum_probs=182.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCH---HHHhc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNL---KQLRS 1085 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1085 (1255)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 578999999963 469999999999999999999999999999999999999999999999999987764 56789
Q ss_pred ceEEEccCCCCCcc-cHHHHHhcCCC---CCCHHH----HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHH
Q 000846 1086 HIALVSQEPTLFAG-TIRENIAYGKA---DARESE----IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1086 ~i~~V~Qdp~LF~g-TIreNl~~g~~---~~~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrla 1157 (1255)
+|+||||++.+|.. |++||+.++.. ..+.++ +.++++..++ +........+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGL-----------RGAEDLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCC-----------chhhcCChhhCCHHHHHHHH
Confidence 99999999999986 99999987521 123222 3333333333 22233445679999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999999875 99999999999999999999975
Q ss_pred h
Q 000846 1235 L 1235 (1255)
Q Consensus 1235 ~ 1235 (1255)
.
T Consensus 227 ~ 227 (235)
T cd03261 227 S 227 (235)
T ss_pred C
Confidence 3
No 162
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.2e-43 Score=389.55 Aligned_cols=212 Identities=37% Similarity=0.622 Sum_probs=181.7
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc-----CCCCceEEECCeecCCCC--HH
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFY-----DPLKGSVFMDEQDIRNYN--LK 1081 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~-----~p~~G~I~idG~di~~i~--~~ 1081 (1255)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.+||.++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999963 36999999999999999999999999999999999999 999999999999998776 56
Q ss_pred HHhcceEEEccCCCCCcccHHHHHhcCCCC--C-C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHH
Q 000846 1082 QLRSHIALVSQEPTLFAGTIRENIAYGKAD--A-R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQ 1154 (1255)
Q Consensus 1082 ~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~--~-~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQ 1154 (1255)
.+|++++|+||++.+|..|++||+.++... . . ++++.++++..++.+.....++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 788999999999999988999999865321 1 1 2344455555555443322110 4789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1155 RIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1155 rlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
|++|||||+++|++|||||||++||+++.+.+.+.|++..+.+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999998656899999999999865 999999999999999998764
No 163
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-44 Score=376.08 Aligned_cols=214 Identities=29% Similarity=0.474 Sum_probs=182.0
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCe---ecCCCCHHHHh
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGY---KIRRLHLKWLR 420 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~---~~~~~~~~~~r 420 (1255)
.|+++|+++.|+. .++++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.+||. |.++.. .-.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 4788999999974 45899999999999999999999999999999999999999999999999 555433 334
Q ss_pred cccEEeccCCccCcc-cHHHHhccCCCC--------CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHH
Q 000846 421 SQMGLVNQEPVLFAT-SITENILFGKDG--------ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQR 491 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~~--------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqr 491 (1255)
++||+|+|+..||.. ||++||+||.+- ....++.+.++.+++..+- ...+.+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la-----------~ryP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLA-----------DRYPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchh-----------hcCchhcChHHHHH
Confidence 689999999999975 999999999731 1122344444444444433 34457999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhh-hhcCEEEEEeCCEEEEecChhHH
Q 000846 492 IAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTI-RTANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 492 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~-~~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
|||||||..+|++|+||||+++||++.++.+.+.|+++.+ |.|+++|||+.+++ +.||||++|++|+|...|+++|+
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999988753 89999999999987 56999999999999999999999
Q ss_pred hccCC
Q 000846 569 MNRGE 573 (1255)
Q Consensus 569 ~~~~~ 573 (1255)
...+.
T Consensus 226 ~~~P~ 230 (345)
T COG1118 226 YDHPA 230 (345)
T ss_pred hcCCC
Confidence 87643
No 164
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.8e-43 Score=378.32 Aligned_cols=207 Identities=38% Similarity=0.594 Sum_probs=184.8
Q ss_pred ccccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH
Q 000846 1003 RQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ 1082 (1255)
Q Consensus 1003 ~~~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~ 1082 (1255)
||..+.|+++|++++|+.. +.++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...
T Consensus 1 ~~~~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~ 79 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLED 79 (207)
T ss_pred CCCCCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHH
Confidence 3455779999999999742 246999999999999999999999999999999999999999999999999999888888
Q ss_pred HhcceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHH
Q 000846 1083 LRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAI 1162 (1255)
Q Consensus 1083 lR~~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARAL 1162 (1255)
+|++|+||||+|.+|++|++||+.+... .+++++.++++ ++.....|||||+||++||||+
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral 140 (207)
T cd03369 80 LRSSLTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARAL 140 (207)
T ss_pred HHhhEEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHH
Confidence 8999999999999999999999976542 34444444332 2456788999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCH
Q 000846 1163 LKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSH 1229 (1255)
Q Consensus 1163 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~ 1229 (1255)
+++|+||||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 141 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 141 LKRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred hhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 9999999999999999999999999999998778999999999999988999999999999998874
No 165
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-43 Score=369.39 Aligned_cols=197 Identities=32% Similarity=0.520 Sum_probs=173.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.+++++|+.+|++ ..||+||||+|++||.|+|+||||||||||++++.|+.+|++|+|.++|.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4899999999974 5699999999999999999999999999999999999999999999999988543 5689
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKADA------RESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~~~------~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
+||+|++.||. -|++||+.++.... ..+...+.++.+|+.+|-...| .+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHH
Confidence 99999999998 69999999885421 2345667777777777765544 689999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhh-hhcCEEEEEeC--CEE
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTI-QKSDTIAVIKN--GRV 1223 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~D~I~Vl~~--G~i 1223 (1255)
||+.+|+||+||||.+|||+.|...+|+.+.+.. .++||++|||++++. .-+|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999999998875 469999999999886 45999999999 555
No 166
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-43 Score=395.92 Aligned_cols=217 Identities=29% Similarity=0.516 Sum_probs=189.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++....++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 38999999999742224599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCC--CCCcccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHH
Q 000846 1088 ALVSQEP--TLFAGTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALA 1159 (1255)
Q Consensus 1088 ~~V~Qdp--~LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalA 1159 (1255)
+||+|+| .++..|++|||.++.. ..+. +.+.++++..++.++.. ....+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKE-----------REPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHHHHH
Confidence 9999998 3667899999987632 1222 34556666666655543 33468999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1160 RAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1160 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
|||+++|+||||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 8999999999999988999999999999999999998764
No 167
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-43 Score=373.65 Aligned_cols=209 Identities=28% Similarity=0.514 Sum_probs=181.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++|+|.++ ++|+||||++++|++++|+||||||||||+|+|+|+.+|.+|+|.+.|.+...... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 59999999999743 49999999999999999999999999999999999999999999999988765432 4689
Q ss_pred EEeccCC---ccCcccHHHHhccCCCCC----------CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHH
Q 000846 424 GLVNQEP---VLFATSITENILFGKDGA----------SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQ 490 (1255)
Q Consensus 424 ~~v~Q~~---~l~~~ti~~ni~~~~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrq 490 (1255)
|||||.. |-|+-||+|=+.+|.... ..+++.++++.+++.++.+ ..-..|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~-----------r~i~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRD-----------RQIGELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhC-----------CcccccCcHHHH
Confidence 9999964 568899999999874321 1366778888887776543 334589999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 491 RIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK-GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 491 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||.|||||+++|++|+|||||+++|+.++..+.+.|+++++ |+||++||||++.+. .+|+|+.|. ++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999999865 999999999999985 599999985 568899999998
Q ss_pred hc
Q 000846 569 MN 570 (1255)
Q Consensus 569 ~~ 570 (1255)
.+
T Consensus 226 ~~ 227 (254)
T COG1121 226 LT 227 (254)
T ss_pred cC
Confidence 76
No 168
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1e-42 Score=380.50 Aligned_cols=220 Identities=42% Similarity=0.709 Sum_probs=200.3
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcc
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQ 422 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 422 (1255)
++|+++|+++.|++. ..++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999642 2469999999999999999999999999999999999999999999999999887777777889
Q ss_pred cEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCC
Q 000846 423 MGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDP 502 (1255)
Q Consensus 423 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~ 502 (1255)
++|++|++.+|..|++||+.++......+++.+.++..++.+.+..+|.|++|.+.....+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999889999998865444555677778888898999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEec
Q 000846 503 KILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESG 563 (1255)
Q Consensus 503 ~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g 563 (1255)
++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999886668999999999988789999999999998754
No 169
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-43 Score=388.06 Aligned_cols=218 Identities=31% Similarity=0.518 Sum_probs=189.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC---CCCceEEECCeecCCCCHHHHh
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD---PLKGSVFMDEQDIRNYNLKQLR 1084 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~lR 1084 (1255)
.|+++||+++|++ +++|+|+||++++||.+||+|+||||||||+++|+|+++ |++|+|.+||.++...+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999963 369999999999999999999999999999999999985 6899999999999988888889
Q ss_pred cceEEEccCCCCCcccHHHHHhcCCC--------CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1085 SHIALVSQEPTLFAGTIRENIAYGKA--------DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~gTIreNl~~g~~--------~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
++|+|+||+|.+|..|++||+.++.. ...++++.++++..++.+++. ....+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVK-------DKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhh-------HHhcCCcccCCHHHHHHH
Confidence 99999999999999999999977521 111224455555555544432 223456788999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
+|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|++++++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999999999877899999999999886 5999999999999999999999864
No 170
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-42 Score=395.68 Aligned_cols=222 Identities=27% Similarity=0.489 Sum_probs=189.9
Q ss_pred ceEEEEeEEEEcCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCC------
Q 000846 343 GEIEFRDVYFCYPSRP--DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRL------ 414 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~------ 414 (1255)
..|+++|++|+|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|+++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3599999999997421 24699999999999999999999999999999999999999999999999998653
Q ss_pred ----------CHHHHhcccEEeccCC--ccCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCccc-chhcC
Q 000846 415 ----------HLKWLRSQMGLVNQEP--VLFATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYE-TQVGQ 479 (1255)
Q Consensus 415 ----------~~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~ 479 (1255)
....+|++|+||+|+| .+|+.||+|||.++.. ..+.++.. + .+.+++..+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~---~--~~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAK---K--LAKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHH---H--HHHHHHHHc--CCChhHhcC
Confidence 3457889999999998 6899999999998742 12222221 1 223455555 665 56788
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhh-hhcCEEEEEeCC
Q 000846 480 LGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTI-RTANLIMVLKAG 557 (1255)
Q Consensus 480 ~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~-~~~d~i~vl~~G 557 (1255)
.+.+||||||||++|||||+++|++|||||||++||+.+++.+.+.|+++. +|+|+|+|||+++.+ ..||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 899999999999999999999999999999999999999999999998874 589999999999987 569999999999
Q ss_pred EEEEecChhHHhcc
Q 000846 558 KVVESGSHNELMNR 571 (1255)
Q Consensus 558 ~i~~~g~~~~l~~~ 571 (1255)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999998753
No 171
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-43 Score=394.44 Aligned_cols=218 Identities=34% Similarity=0.568 Sum_probs=194.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+.+|. +..+++|+||+|++||.++++|||||||||++++|.||..|++|+|.+||.|+..++++ ++.|
T Consensus 5 ~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 5 ALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred eEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 599999999996 45799999999999999999999999999999999999999999999999999998875 5899
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCC---CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHH
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKA---DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALA 1159 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~---~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalA 1159 (1255)
++|+|+..||. .||+||+.||.. ...+ +.+.++++.+++.++-... ..+|||||+||+|||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----------p~qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRK-----------PHQLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhC-----------hhhhChHHHHHHHHH
Confidence 99999999997 599999999954 1222 3678888888888775544 467999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhh-hhcCEEEEEeCCEEEEecCHHHHHhhh
Q 000846 1160 RAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTI-QKSDTIAVIKNGRVVEQGSHNELVALS 1236 (1255)
Q Consensus 1160 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~D~I~Vl~~G~ive~G~~~eLl~~~ 1236 (1255)
|||..+|++||||||-|+||.+-...++..+++.. .|.|.|+|||+-++. .-+|||+||.+|+|...|+|+|+...
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~- 227 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER- 227 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC-
Confidence 99999999999999999999999999999998875 388999999998875 56999999999999999999999986
Q ss_pred cCchhH
Q 000846 1237 RGGAYY 1242 (1255)
Q Consensus 1237 ~~g~y~ 1242 (1255)
+...|-
T Consensus 228 P~~~fV 233 (352)
T COG3842 228 PATRFV 233 (352)
T ss_pred cchHHH
Confidence 665554
No 172
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-42 Score=401.53 Aligned_cols=220 Identities=37% Similarity=0.561 Sum_probs=184.5
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH---Hh
Q 000846 1009 IELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ---LR 1084 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 1084 (1255)
|+++||+++|+... +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997211 346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cceEEEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1085 SHIALVSQEPTLFA-GTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~-gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
++|+||||++.+|. .|++||+.++.. ..+.++..+ .+.++++.+ |++........+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999886 699999987531 122222211 112233322 33333344557899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
|+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999876 999999999999999999999864
No 173
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-43 Score=401.31 Aligned_cols=217 Identities=32% Similarity=0.540 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.+. .+++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 5999999999963 468999999999999999999999999999999999999999999999999987765 36789
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFAG-TIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1088 ~~V~Qdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
+||+|++.+|.. |++||+.|+.. ..+ ++++.++++..++.++. .....+||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~-----------~r~~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFE-----------DRYVDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHH
Confidence 999999999974 99999998732 122 23455566666655443 3335689999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHhhhc
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVALSR 1237 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~~~~ 1237 (1255)
||+++|+|||||||||+||+.+.+.+++.|+++.+ ++|+|+|||+++.+. -||+|+||++|++++.|+|+++.+. +
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~-p 228 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ-P 228 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-C
Confidence 99999999999999999999999999999998864 799999999999985 4999999999999999999999875 5
Q ss_pred Cchh
Q 000846 1238 GGAY 1241 (1255)
Q Consensus 1238 ~g~y 1241 (1255)
...|
T Consensus 229 ~~~~ 232 (351)
T PRK11432 229 ASRF 232 (351)
T ss_pred CchH
Confidence 5444
No 174
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-42 Score=391.08 Aligned_cols=217 Identities=32% Similarity=0.572 Sum_probs=184.3
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCC--HHHHh
Q 000846 1009 IELKNVFFAYPTRP--DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYN--LKQLR 1084 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~--~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--~~~lR 1084 (1255)
|+++||+++|+... .+++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 146999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cceEEEccCC--CCCcccHHHHHhcCCC--CCCHHH----HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1085 SHIALVSQEP--TLFAGTIRENIAYGKA--DARESE----IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1085 ~~i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
++|+||||+| .+|+.|++|||.++.. ..+.++ +.++++.+++. +++.......+||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5789999999987532 233333 33334333332 01234555678999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHH
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+. .||||++|++|++++.|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 789999999999985 59999999999999999999987
Q ss_pred h
Q 000846 1234 A 1234 (1255)
Q Consensus 1234 ~ 1234 (1255)
+
T Consensus 234 ~ 234 (287)
T PRK13637 234 K 234 (287)
T ss_pred h
Confidence 5
No 175
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.6e-42 Score=380.46 Aligned_cols=219 Identities=54% Similarity=0.867 Sum_probs=197.6
Q ss_pred ccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHh
Q 000846 341 VRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLR 420 (1255)
Q Consensus 341 ~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r 420 (1255)
..+.++++|++++|+++...++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+....+
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45679999999999753234699999999999999999999999999999999999999999999999998877777788
Q ss_pred cccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhcc
Q 000846 421 SQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIR 500 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~ 500 (1255)
++++|++|++.+|+.|++||+.++.......++.+......+.+++..+|.|+++.+.+.+.+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 89999999999999999999998765444455555555667788999999899999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEE
Q 000846 501 DPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKV 559 (1255)
Q Consensus 501 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i 559 (1255)
+|+++||||||++||+++.+.+.+.|+++.+++|+|++||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999988778999999999999978999999999974
No 176
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-42 Score=382.20 Aligned_cols=224 Identities=34% Similarity=0.579 Sum_probs=190.2
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCCCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 000846 1088 ALVSQEPTLFAGTIRENIAYGKAD--ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN 1165 (1255)
Q Consensus 1088 ~~V~Qdp~LF~gTIreNl~~g~~~--~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~ 1165 (1255)
+|+||+|.+|+.|++||+.++... ..++++.+.++..++. . ........+||||||||++||||++++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-------~---~~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLN-------K---EYATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCC-------H---HHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999875321 1122333333333331 0 123345678999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhhhcCchhH
Q 000846 1166 PSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVALSRGGAYY 1242 (1255)
Q Consensus 1166 p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~ 1242 (1255)
|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|++++++.. +...|.
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-~~~~~~ 228 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN-PQNEVT 228 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC-CCcHHH
Confidence 99999999999999999999999999875 38999999999999875 999999999999999999999864 344455
Q ss_pred HHH
Q 000846 1243 SLI 1245 (1255)
Q Consensus 1243 ~l~ 1245 (1255)
+.+
T Consensus 229 ~~~ 231 (241)
T PRK14250 229 KLF 231 (241)
T ss_pred HHH
Confidence 544
No 177
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-42 Score=400.06 Aligned_cols=219 Identities=26% Similarity=0.472 Sum_probs=189.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++ +.++|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+++.. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999952 24699999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
+||||++.+|. .|++|||.|+.. ..+ .+++.++++..++.++.... ..+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRK-----------PRELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCC-----------hhhCCHHHHHHHHHHH
Confidence 99999999996 599999998742 122 23455666666766655443 3579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHhhhc
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVALSR 1237 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~~~~ 1237 (1255)
||+++|+|||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++.+. +
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~-p 226 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK-P 226 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC-C
Confidence 99999999999999999999999999999998754 789999999999875 5999999999999999999999875 4
Q ss_pred CchhH
Q 000846 1238 GGAYY 1242 (1255)
Q Consensus 1238 ~g~y~ 1242 (1255)
...|.
T Consensus 227 ~~~~~ 231 (356)
T PRK11650 227 ASTFV 231 (356)
T ss_pred ccHHH
Confidence 44443
No 178
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.1e-42 Score=384.69 Aligned_cols=221 Identities=27% Similarity=0.491 Sum_probs=185.9
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHH-hcce
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQL-RSHI 1087 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~i 1087 (1255)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 478999999963 469999999999999999999999999999999999999999999999999988876554 5789
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCCCHHHH-------HHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHH
Q 000846 1088 ALVSQEPTLFAG-TIRENIAYGKADARESEI-------KKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALA 1159 (1255)
Q Consensus 1088 ~~V~Qdp~LF~g-TIreNl~~g~~~~~~~ei-------~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalA 1159 (1255)
+|+||++.+|.+ |++||+.++........+ ........+.++++.+ |++........+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999986 999999875421110000 0001112234445444 565556667788999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1160 RAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1160 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 99999999999999999999999999999999875 68999999999999866 99999999999999999999865
No 179
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-42 Score=389.44 Aligned_cols=212 Identities=32% Similarity=0.544 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
-|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 3899999999963 24699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccCC--CCCcccHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHH
Q 000846 1088 ALVSQEP--TLFAGTIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALA 1159 (1255)
Q Consensus 1088 ~~V~Qdp--~LF~gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalA 1159 (1255)
+||||+| .+|..|++||+.++.. ..+ ++++.++++..++.++.... ...||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKP-----------PYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCC-----------hhhCCHHHHHHHHHH
Confidence 9999998 6888999999987631 122 23455566666665544333 347999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHH
Q 000846 1160 RAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1160 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
|||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999999999999875 4899999999999985 5999999999999999998765
No 180
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-42 Score=386.01 Aligned_cols=218 Identities=30% Similarity=0.547 Sum_probs=187.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1080 (1255)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 4999999999963 359999999999999999999999999999999999975 589999999999875 345
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-----CHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-----RESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-----~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|++|+|+||++.+|..|++||+.++.. .. .++++.++++..++.+++. ........+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHHH
Confidence 678899999999999999999999986521 11 1234555555555544332 223455678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999855 999999999999999999999
Q ss_pred Hhh
Q 000846 1233 VAL 1235 (1255)
Q Consensus 1233 l~~ 1235 (1255)
.+.
T Consensus 236 ~~~ 238 (253)
T PRK14242 236 FTR 238 (253)
T ss_pred HcC
Confidence 864
No 181
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-42 Score=400.10 Aligned_cols=214 Identities=28% Similarity=0.463 Sum_probs=184.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ +..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+||+++.+.++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999942 24699999999999999999999999999999999999999999999999999887654 4689
Q ss_pred EEeccCCccCcc-cHHHHhccCCCC--CCH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDG--ASM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
|||+|++.+|+. ||+|||.|+... .+. +++.++++..+ ++........+|||||||||+|||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~g-----------L~~~~~~~~~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILE-----------LEPLLDRKPRELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcC-----------ChhHhhCChhhCCHHHHHHHHHHH
Confidence 999999999975 999999987531 122 22334444444 444445555799999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccC
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
||+++|++||||||||+||+.+++.+.+.|+++.+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++.+++
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 99999999999999999999999999999988754 899999999999875 59999999999999999999998763
No 182
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-42 Score=389.84 Aligned_cols=220 Identities=31% Similarity=0.542 Sum_probs=186.8
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCC----CHHH
Q 000846 1009 IELKNVFFAYPTRP--DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNY----NLKQ 1082 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~--~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~ 1082 (1255)
|+++||+++|++.+ ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996422 24699999999999999999999999999999999999999999999999999653 3467
Q ss_pred HhcceEEEccCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHcccccccc-ccCCCCCCCChHHHHHHH
Q 000846 1083 LRSHIALVSQEP--TLFAGTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDT-YCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1083 lR~~i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt-~vge~G~~LSgGQkQrla 1157 (1255)
+|++|+||||+| .+|..|++|||.++.. ..+.++..+. +.+++..+ ||++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 899999999998 5888999999987632 2233333221 23344433 5653 345667899999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||||+.+|+||||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+. .||+|++|++|++++.|+++++++
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 4899999999999985 589999999999999999999876
Q ss_pred h
Q 000846 1235 L 1235 (1255)
Q Consensus 1235 ~ 1235 (1255)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 183
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-42 Score=384.82 Aligned_cols=224 Identities=31% Similarity=0.510 Sum_probs=189.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 1080 (1255)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5999999999963 3599999999999999999999999999999999999997 48999999999863 345
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--C-CC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--D-AR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~-~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|++|+||||++.+|..|++|||.++.. . .+ ++.+.++++.+++.+.+ ++.+++ ...+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHH
Confidence 678899999999999999999999987531 1 11 23445555555543322 233444 4678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.+ ||||++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999855 999999999999999999999
Q ss_pred HhhhcCchhH
Q 000846 1233 VALSRGGAYY 1242 (1255)
Q Consensus 1233 l~~~~~g~y~ 1242 (1255)
.+. ++..|.
T Consensus 237 ~~~-~~~~~~ 245 (254)
T PRK14273 237 FFN-PKNTKT 245 (254)
T ss_pred HhC-CCChHH
Confidence 864 344443
No 184
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.8e-42 Score=399.67 Aligned_cols=217 Identities=29% Similarity=0.461 Sum_probs=186.8
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+.. +++|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 4589999999999999999999999999999999999999999999999999887654 6789
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
+||+|++.+|. .|++||+.|+.. ..+. +++.++++..+ ++........+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~-----------L~~~~~~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVG-----------LPGSERKYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------CCchhhCChhhCCHHHHHHHHHHH
Confidence 99999999996 699999998732 1122 23333444333 444444556789999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHhhhc
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVALSR 1237 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~~~~ 1237 (1255)
||+++|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+. -||+|++|++|++++.|+|+++.+. +
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~-p 226 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH-P 226 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-C
Confidence 99999999999999999999999999999998754 789999999999875 5999999999999999999999975 5
Q ss_pred Cchh
Q 000846 1238 GGAY 1241 (1255)
Q Consensus 1238 ~g~y 1241 (1255)
...|
T Consensus 227 ~~~~ 230 (353)
T TIGR03265 227 ATPF 230 (353)
T ss_pred CCHH
Confidence 5455
No 185
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-42 Score=388.88 Aligned_cols=215 Identities=29% Similarity=0.517 Sum_probs=188.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
-|+++||+++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 38999999999642 34699999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEccCC--CCCcccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHH
Q 000846 1088 ALVSQEP--TLFAGTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALA 1159 (1255)
Q Consensus 1088 ~~V~Qdp--~LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalA 1159 (1255)
+|+||+| .+++.|++|||.++.. ..+. +++.++++..++.+++... ...||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNRE-----------PHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 4677899999987532 1222 3355556666665554433 357999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHh
Q 000846 1160 RAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1160 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++++
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999999998764 789999999999998899999999999999999999875
No 186
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-42 Score=382.31 Aligned_cols=211 Identities=31% Similarity=0.480 Sum_probs=179.9
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .+++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999876543 367899
Q ss_pred EEccCCCCCc-ccHHHHHhcCCCC--C----CH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHH
Q 000846 1089 LVSQEPTLFA-GTIRENIAYGKAD--A----RE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1089 ~V~Qdp~LF~-gTIreNl~~g~~~--~----~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrla 1157 (1255)
||||+|.+|. .|++||+.++... . +. +++.++++..+ ++........+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQ-----------LDWLADRYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcC-----------ChhhhhcChhhCCHHHHHHHH
Confidence 9999999886 6999999875321 1 11 12333333333 333334455689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999998755 99999999999999999999976
Q ss_pred h
Q 000846 1235 L 1235 (1255)
Q Consensus 1235 ~ 1235 (1255)
.
T Consensus 227 ~ 227 (239)
T cd03296 227 H 227 (239)
T ss_pred C
Confidence 4
No 187
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.7e-42 Score=398.49 Aligned_cols=206 Identities=32% Similarity=0.514 Sum_probs=179.3
Q ss_pred CccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHH----hcceEEEccCCCCCc-
Q 000846 1024 QMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQL----RSHIALVSQEPTLFA- 1098 (1255)
Q Consensus 1024 ~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~~i~~V~Qdp~LF~- 1098 (1255)
+++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|++||.++...+..++ |++|+||||++.+|.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 469999999999999999999999999999999999999999999999999999998887 789999999999997
Q ss_pred ccHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 000846 1099 GTIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLD 1172 (1255)
Q Consensus 1099 gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLD 1172 (1255)
.|++|||.++.. ..+ .+++.++++.+++.++ ....+.+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~-----------~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEY-----------EHRYPDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchh-----------hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 599999987632 112 2344555555555444 44455689999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhh-hhcCEEEEEeCCEEEEecCHHHHHhhhcCchh
Q 000846 1173 EATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTI-QKSDTIAVIKNGRVVEQGSHNELVALSRGGAY 1241 (1255)
Q Consensus 1173 EaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y 1241 (1255)
||||+||+.+.+.+++.+.+.. .++|+|+|||+++.+ +.||+|++|++|++++.|+|+++++. +...|
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~-p~~~~ 225 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN-PANEY 225 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC-cccHH
Confidence 9999999999999999999874 389999999999986 45999999999999999999999875 33334
No 188
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3e-42 Score=383.23 Aligned_cols=222 Identities=33% Similarity=0.541 Sum_probs=187.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----CceEEECCeecCCC--CHH
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPL-----KGSVFMDEQDIRNY--NLK 1081 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~i--~~~ 1081 (1255)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999963 35999999999999999999999999999999999999998 99999999998763 456
Q ss_pred HHhcceEEEccCCCCCcccHHHHHhcCCC--C-CC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHH
Q 000846 1082 QLRSHIALVSQEPTLFAGTIRENIAYGKA--D-AR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQ 1154 (1255)
Q Consensus 1082 ~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~-~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQ 1154 (1255)
.+|++|+|+||++.+|..|++||+.++.. . .+ ++++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 77899999999999999999999986421 1 11 123444455555432221 2234456789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1155 RIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1155 rlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998767999999999998865 9999999999999999999997
Q ss_pred hhhcCchh
Q 000846 1234 ALSRGGAY 1241 (1255)
Q Consensus 1234 ~~~~~g~y 1241 (1255)
.. +...+
T Consensus 232 ~~-~~~~~ 238 (247)
T TIGR00972 232 TN-PKEKR 238 (247)
T ss_pred hC-CCChH
Confidence 64 34443
No 189
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-42 Score=379.11 Aligned_cols=216 Identities=35% Similarity=0.546 Sum_probs=183.4
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH---HHHhc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL---KWLRS 421 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~r~ 421 (1255)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 359999999999999999999999999999999999999999999999999887654 56788
Q ss_pred ccEEeccCCccCcc-cHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHH
Q 000846 422 QMGLVNQEPVLFAT-SITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARA 497 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARa 497 (1255)
.++||+|++.+|.. |++||+.++.. ..+.++..+ .+.+.++.+ |+.........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIRE-----IVLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999999986 99999987532 122222211 112334444 55444556667999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000846 498 LIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 498 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 9999999999999999999999999999998743 8999999999998864 99999999999999999998865
No 190
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-42 Score=384.03 Aligned_cols=220 Identities=31% Similarity=0.541 Sum_probs=188.7
Q ss_pred cccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCC--C
Q 000846 1006 RGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRN--Y 1078 (1255)
Q Consensus 1006 ~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i 1078 (1255)
.+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 456999999999963 369999999999999999999999999999999999986 589999999999863 4
Q ss_pred CHHHHhcceEEEccCCCCCcccHHHHHhcCCC---CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChH
Q 000846 1079 NLKQLRSHIALVSQEPTLFAGTIRENIAYGKA---DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGG 1151 (1255)
Q Consensus 1079 ~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~---~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgG 1151 (1255)
+...+|++|+|+||+|.+|..|++||+.++.. ..+. +++.++++..++.+.+ .....+...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEV-------KDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhh-------HHHHhcCCCCCCHH
Confidence 56678999999999999999999999987532 1222 3455555555543322 23345567789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHH
Q 000846 1152 QKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHN 1230 (1255)
Q Consensus 1152 QkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~ 1230 (1255)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778899999999999864 9999999999999999999
Q ss_pred HHHhh
Q 000846 1231 ELVAL 1235 (1255)
Q Consensus 1231 eLl~~ 1235 (1255)
+++..
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 99764
No 191
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-42 Score=395.45 Aligned_cols=214 Identities=32% Similarity=0.508 Sum_probs=185.0
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 6999999999963 4589999999999999999999999999999999999999999999999999876643 5789
Q ss_pred EEeccCCccCcc-cHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 424 GLVNQEPVLFAT-SITENILFGKD--GASM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
+||+|++.+|+. ||+|||.|+.. .... +++.++++.. |+.........+|||||||||||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~-----------gl~~~~~r~~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELV-----------DLAGFEDRYVDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHHHHHH
Confidence 999999999976 99999998743 1122 2233333333 4444445556799999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhh-hhcCEEEEEeCCEEEEecChhHHhccCC
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTI-RTANLIMVLKAGKVVESGSHNELMNRGE 573 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~-~~~d~i~vl~~G~i~~~g~~~~l~~~~~ 573 (1255)
||+.+|++||||||||+||+.+++.+.+.|+++.+ |+|+|+|||+++.+ ..||+|++|++|++++.|+++++..++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998854 89999999999987 4599999999999999999999987643
No 192
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.6e-42 Score=377.36 Aligned_cols=211 Identities=27% Similarity=0.468 Sum_probs=179.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++||+++|+.. ++++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEE
Confidence 5789999999642 24699999999999999999999999999999999999999999999999998764 366788999
Q ss_pred EEccCCCCC-cccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLF-AGTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF-~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
||||++.+| ..|++||+.++.. ..+. +++.++++..++.+. ++ ....+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~----~~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDK-------AN----KRARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-------Hh----ChhhhCCHHHHHHHHHHHH
Confidence 999999998 5799999976421 1122 233344444433222 23 3346799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999998778999999999999865 999999999999999999876
No 193
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.6e-42 Score=400.51 Aligned_cols=221 Identities=25% Similarity=0.476 Sum_probs=193.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.+++...+|++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 3899999999963 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCC-CcccHHHHHhcCCC----------CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1088 ALVSQEPTL-FAGTIRENIAYGKA----------DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1088 ~~V~Qdp~L-F~gTIreNl~~g~~----------~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
+||||++.+ |+.|++||+.++.. ..+.+.+.++++..++.++.. ....+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~-----------~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFAD-----------RPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHH
Confidence 999999987 67899999987642 112345667777777765542 23467999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
+|||||+++|+||||||||++||+.+...+++.|+++. .++|+|+++|+++.+. .|||+++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999885 5789999999999995 599999999999999999999875
Q ss_pred hhcCchhHHHH
Q 000846 1235 LSRGGAYYSLI 1245 (1255)
Q Consensus 1235 ~~~~g~y~~l~ 1245 (1255)
. ....+++
T Consensus 229 ~---~~l~~~~ 236 (402)
T PRK09536 229 A---DTLRAAF 236 (402)
T ss_pred c---HHHHHHh
Confidence 3 3444554
No 194
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=8.4e-39 Score=376.01 Aligned_cols=472 Identities=16% Similarity=0.129 Sum_probs=335.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 66 RLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKIS 145 (1255)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~r~~~D~~~i~~~~~~~~~ 145 (1255)
.+..++.+..++...+.++......+.-.-|-..+.++-+...--|+-....|....-..=+|++.|+..+-+.......
T Consensus 91 ~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~ 170 (604)
T COG4178 91 VFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSF 170 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHH
Confidence 33344444444455555555555555555555566666666553333322111111112336999999999888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-----------H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000846 146 NTLAYLSTFFFCLLFSFILSW-----------R----LSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQ 210 (1255)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~-----------~----l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 210 (1255)
.++.++.+++...++++-++- . +..+++..+++-.++..+++|...+...+..+..+..-.....
T Consensus 171 g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvr 250 (604)
T COG4178 171 GLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVR 250 (604)
T ss_pred HHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHH
Confidence 777777776666655552222 1 1222222233333444566676667766666666777777777
Q ss_pred HHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 000846 211 AVSSIRTVYSYVAEHETLIRFSNALQKTMELGIKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGV 289 (1255)
Q Consensus 211 ~l~~i~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~ 289 (1255)
.-++.+.|-.|+.|+.+.++.++......+...+.......+..+. ...+++.++-+..++-....|.++.|.+.....
T Consensus 251 v~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa~~ 330 (604)
T COG4178 251 VRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQAVG 330 (604)
T ss_pred HHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHHHH
Confidence 8889999999999999988877766655443333222222111111 222233333333344456689999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----CCCCCCcccc--cCCCccceEEEEeEEEEcCCCCCCcc
Q 000846 290 SIIMGGLSVLGALPNLTAITEAKVAATRIFEMVDRTP-----AIDTDDKMGK--ALSYVRGEIEFRDVYFCYPSRPDTLV 362 (1255)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~-----~~~~~~~~~~--~~~~~~~~i~~~~v~~~y~~~~~~~~ 362 (1255)
.+......+..+...+..+..-++...|+.++.+.-. ...+...... .....+..|+++|++..-|+. ...
T Consensus 331 aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~--~~l 408 (604)
T COG4178 331 AFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG--QTL 408 (604)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--Cee
Confidence 8888888899999999999999999999998864211 1111110000 001114679999999998854 478
Q ss_pred ccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhc
Q 000846 363 LQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENIL 442 (1255)
Q Consensus 363 l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~ 442 (1255)
|++.||++++||.+.|.||||||||||+++|+|++|--+|+|..-. ...+-|+||.|.+-.||+||-|+
T Consensus 409 l~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre~l~ 477 (604)
T COG4178 409 LSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLREALC 477 (604)
T ss_pred eccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHHHHHh
Confidence 9999999999999999999999999999999999999999987652 13589999999999999999999
Q ss_pred cCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHH
Q 000846 443 FGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSER 520 (1255)
Q Consensus 443 ~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~ 520 (1255)
|+... .+++++.+++.++++.+++.++.+ .+. =...||+|||||+|+||.++++|++++|||+|||||++++.
T Consensus 478 YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~~~----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~ 552 (604)
T COG4178 478 YPNAAPDFSDAELVAVLHKVGLGDLAERLDE-EDR----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETED 552 (604)
T ss_pred CCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-cCc----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHH
Confidence 98764 789999999999999999998743 222 34579999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEe
Q 000846 521 IVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLK 555 (1255)
Q Consensus 521 ~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~ 555 (1255)
.+.+.+++...+.|+|-|.||.......++.+-+.
T Consensus 553 ~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 553 RLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 99999999889999999999998887766665554
No 195
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.1e-42 Score=376.51 Aligned_cols=217 Identities=29% Similarity=0.452 Sum_probs=181.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHH-hcce
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQL-RSHI 1087 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~i 1087 (1255)
|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.... |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 369999999999999999999999999999999999999999999999999988876654 6789
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 000846 1088 ALVSQEPTLFAG-TIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNP 1166 (1255)
Q Consensus 1088 ~~V~Qdp~LF~g-TIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p 1166 (1255)
+|+||++.+|.+ |++||+.++.......+..+. +.+++..++ +++........+||||||||++|||||+++|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKAR-----LERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHH-----HHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 999999876432211111111 111222221 1233334556789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1167 SILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1167 ~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999875 57899999999998765 99999999999999999998853
No 196
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-42 Score=381.70 Aligned_cols=212 Identities=36% Similarity=0.551 Sum_probs=181.8
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCC---HHHHhc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYN---LKQLRS 1085 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~lR~ 1085 (1255)
|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999963 146999999999999999999999999999999999999999999999999998876 456788
Q ss_pred ceEEEccCCCCCc-ccHHHHHhcCCCC-----------CC---HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCCh
Q 000846 1086 HIALVSQEPTLFA-GTIRENIAYGKAD-----------AR---ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSG 1150 (1255)
Q Consensus 1086 ~i~~V~Qdp~LF~-gTIreNl~~g~~~-----------~~---~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSg 1150 (1255)
+++|+||++.+|. .|++||+.++... .+ ++++.++++.. |++......+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV-----------GLLDKAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc-----------CChhhhCCCcccCCH
Confidence 9999999998887 6999999865321 01 12233333333 333344556778999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEec
Q 000846 1151 GQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1151 GQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G 1227 (1255)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 3899999999999997 59999999999999999
Q ss_pred CHHHHH
Q 000846 1228 SHNELV 1233 (1255)
Q Consensus 1228 ~~~eLl 1233 (1255)
+++++.
T Consensus 228 ~~~~~~ 233 (241)
T cd03256 228 PPAELT 233 (241)
T ss_pred CHHHhh
Confidence 999974
No 197
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.7e-42 Score=377.50 Aligned_cols=203 Identities=31% Similarity=0.479 Sum_probs=173.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHH---HHhc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLK---QLRS 1085 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR~ 1085 (1255)
|+++||+++|++. .+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999632 24699999999999999999999999999999999999999999999999999876543 4788
Q ss_pred ceEEEccCCCCCc-ccHHHHHhcCCC------CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHH
Q 000846 1086 HIALVSQEPTLFA-GTIRENIAYGKA------DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIAL 1158 (1255)
Q Consensus 1086 ~i~~V~Qdp~LF~-gTIreNl~~g~~------~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlal 1158 (1255)
+++|+||+|.+|. .|++||+.++.. ...++++.++++..++.++.. ....+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAH-----------ALPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHHHHH
Confidence 9999999999886 599999986421 112344556666666554433 3345799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000846 1159 ARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRV 1223 (1255)
Q Consensus 1159 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~i 1223 (1255)
||||+++|+||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 47899999999999875 899999999975
No 198
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2e-41 Score=379.34 Aligned_cols=219 Identities=30% Similarity=0.475 Sum_probs=194.9
Q ss_pred cccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhc
Q 000846 1006 RGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRS 1085 (1255)
Q Consensus 1006 ~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~ 1085 (1255)
.+.|+++|+++.. +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 37 ~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------- 98 (282)
T cd03291 37 DNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------- 98 (282)
T ss_pred CCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------
Confidence 4569999999952 3599999999999999999999999999999999999999999999998
Q ss_pred ceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 000846 1086 HIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN 1165 (1255)
Q Consensus 1086 ~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~ 1165 (1255)
+|+|+||++.+|++|++||+.++.. ..+.++.++++..++.+++..+|.++++.+++.+.+||||||||++|||||+++
T Consensus 99 ~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~ 177 (282)
T cd03291 99 RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKD 177 (282)
T ss_pred EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcC
Confidence 3999999999999999999987643 234456677777888899999999999999999999999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHH-HHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhhhcCchhHHH
Q 000846 1166 PSILLLDEATSALDSVSESLVQEAL-EKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSL 1244 (1255)
Q Consensus 1166 p~ILlLDEaTSaLD~~te~~I~~~l-~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~l 1244 (1255)
|+||||||||++||+++...+.+.+ ++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+. ...|.+-
T Consensus 178 p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~--~~~~~~~ 255 (282)
T cd03291 178 ADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL--RPDFSSK 255 (282)
T ss_pred CCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc--chHHHHH
Confidence 9999999999999999999888754 555668999999999999989999999999999999999999763 3455544
Q ss_pred H
Q 000846 1245 I 1245 (1255)
Q Consensus 1245 ~ 1245 (1255)
+
T Consensus 256 ~ 256 (282)
T cd03291 256 L 256 (282)
T ss_pred H
Confidence 3
No 199
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-42 Score=386.52 Aligned_cols=217 Identities=31% Similarity=0.541 Sum_probs=188.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
-|+++||+++|++....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCC--CCCcccHHHHHhcCCC--CCCHHH----HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHH
Q 000846 1088 ALVSQEP--TLFAGTIRENIAYGKA--DARESE----IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALA 1159 (1255)
Q Consensus 1088 ~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalA 1159 (1255)
+|+||+| .++..|+.|||.++.. ..+.++ +.++++.+++.++.. .....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKT-----------REPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHHHHH
Confidence 9999998 4778899999986521 223333 344555555544432 33567999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1160 RAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1160 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998864 7999999999999988999999999999999999999763
No 200
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.8e-42 Score=378.26 Aligned_cols=216 Identities=29% Similarity=0.539 Sum_probs=184.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998776544 46899
Q ss_pred EEccCCCC-CcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 000846 1089 LVSQEPTL-FAGTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN 1165 (1255)
Q Consensus 1089 ~V~Qdp~L-F~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~ 1165 (1255)
|+||++.+ +..|++||+.++.. ..+.++.. ..+.+++..+ |++........+||||||||++|||||+++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 56899999976432 12222211 1223344433 555555666778999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1166 PSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1166 p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
|+||||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999875 48999999999999988999999999999999999999864
No 201
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-42 Score=388.22 Aligned_cols=216 Identities=25% Similarity=0.489 Sum_probs=182.7
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCC----CCHHH
Q 000846 1009 IELKNVFFAYPTRP--DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRN----YNLKQ 1082 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~--~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~~~~ 1082 (1255)
|+++||+|+|+... .+++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997321 1359999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEccCC--CCCcccHHHHHhcCCC--CCCHHH----HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHH
Q 000846 1083 LRSHIALVSQEP--TLFAGTIRENIAYGKA--DARESE----IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQ 1154 (1255)
Q Consensus 1083 lR~~i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQ 1154 (1255)
+|++++||+|+| .+|..|+.||+.++.. ..+.++ +.++++..++. +........+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~----------~~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLA----------DEFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCC----------hhhccCCcccCCHHHHH
Confidence 899999999998 7999999999987632 123333 22333333331 11234556789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHH
Q 000846 1155 RIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1155 rlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
|++|||||+.+|+||||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998875 4899999999999885 5999999999999999999998
Q ss_pred Hh
Q 000846 1233 VA 1234 (1255)
Q Consensus 1233 l~ 1234 (1255)
..
T Consensus 232 ~~ 233 (288)
T PRK13643 232 FQ 233 (288)
T ss_pred Hc
Confidence 75
No 202
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-42 Score=387.24 Aligned_cols=219 Identities=32% Similarity=0.517 Sum_probs=182.9
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHH----hc
Q 000846 1010 ELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQL----RS 1085 (1255)
Q Consensus 1010 ~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~ 1085 (1255)
.++||+++|. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ ++
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 4567777775 2468999999999999999999999999999999999999999999999999988765543 46
Q ss_pred ceEEEccCCCCCc-ccHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHH
Q 000846 1086 HIALVSQEPTLFA-GTIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIAL 1158 (1255)
Q Consensus 1086 ~i~~V~Qdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlal 1158 (1255)
+++|+||++.+|. .|++||+.++.. ..+ ++++.++++..++.+++.. ...+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHK-----------YPDELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------CcccCCHHHHHHHHH
Confidence 8999999999885 699999976421 111 2344555555555444333 345799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1159 ARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1159 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
||||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||++++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999875 37999999999998854 999999999999999999999875
Q ss_pred hcCchhHH
Q 000846 1236 SRGGAYYS 1243 (1255)
Q Consensus 1236 ~~~g~y~~ 1243 (1255)
+...|.+
T Consensus 252 -~~~~~~~ 258 (269)
T cd03294 252 -PANDYVR 258 (269)
T ss_pred -cCcHHHH
Confidence 4444543
No 203
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.5e-42 Score=397.36 Aligned_cols=217 Identities=29% Similarity=0.473 Sum_probs=188.3
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+||+++.+.++. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999973 4589999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEeccCCccCcc-cHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhcc
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIR 500 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~ 500 (1255)
|||+|++.+|+. ||+|||.|+... .+..+. ...+++.++.+ |++......+.+||||||||++|||||+.
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~-----~~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~ 151 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEV-----AERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALAT 151 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999974 999999987431 111221 12234455555 66666777788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccC
Q 000846 501 DPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 501 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
+|++||||||||+||+.+++.+.+.|+++.+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++..++
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 152 SPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999999988743 899999999999875 59999999999999999999998764
No 204
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3e-42 Score=396.46 Aligned_cols=203 Identities=32% Similarity=0.517 Sum_probs=177.5
Q ss_pred CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHH----hcccEEeccCCccCcc
Q 000846 360 TLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWL----RSQMGLVNQEPVLFAT 435 (1255)
Q Consensus 360 ~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~l~~~ 435 (1255)
+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++...+...+ |++++||+|++++|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 459999999999999999999999999999999999999999999999999999888777 7899999999999985
Q ss_pred -cHHHHhccCCCC--CCH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEe
Q 000846 436 -SITENILFGKDG--ASM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLD 508 (1255)
Q Consensus 436 -ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlD 508 (1255)
||+|||.++.+. .+. +++.++++.+ |++...++.+.+|||||||||+|||||+.+|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~v-----------gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLV-----------GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc-----------CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999986431 111 2233333333 5555566667799999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhh-hhcCEEEEEeCCEEEEecChhHHhccCC
Q 000846 509 EATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTI-RTANLIMVLKAGKVVESGSHNELMNRGE 573 (1255)
Q Consensus 509 Epts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~-~~~d~i~vl~~G~i~~~g~~~~l~~~~~ 573 (1255)
||||+||+.+++.+++.+.++. .|+|+|+|||+++.+ +.||+|++|++|++++.|++++++.++.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~ 222 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPA 222 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcc
Confidence 9999999999999999998874 389999999999986 5599999999999999999999987643
No 205
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-42 Score=386.19 Aligned_cols=217 Identities=29% Similarity=0.507 Sum_probs=186.1
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++||+++|++....++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999742224599999999999999999999999999999999999999999999999999887777888999
Q ss_pred EEeccCCc--cCcccHHHHhccCCCC--CCHH----HHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 424 GLVNQEPV--LFATSITENILFGKDG--ASMD----DVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 424 ~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
+||+|+|. ++..||+|||.++... .+.+ ++.++++.. |++........+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELV-----------GMQDFKEREPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHC-----------CCHhHhhCCcccCCHHHHHHHHHH
Confidence 99999984 5567999999987421 2222 233333333 444445555679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhcc
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
|||+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 8999999999999878999999999999999999988653
No 206
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-42 Score=382.94 Aligned_cols=218 Identities=30% Similarity=0.471 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecC--CCCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIR--NYNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~--~i~~ 1080 (1255)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999987 4999999999997 4556
Q ss_pred HHHhcceEEEccCCCCCcc-cHHHHHhcCCC--C--CCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChH
Q 000846 1081 KQLRSHIALVSQEPTLFAG-TIRENIAYGKA--D--ARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGG 1151 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~g-TIreNl~~g~~--~--~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgG 1151 (1255)
..+|++++|+||++.+|.. |++||+.++.. . .+. +++.++++..++.+++. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 6788999999999999975 99999986421 1 011 23444444444432221 2234556789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHH
Q 000846 1152 QKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHN 1230 (1255)
Q Consensus 1152 QkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~ 1230 (1255)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 9999999999999999999
Q ss_pred HHHhh
Q 000846 1231 ELVAL 1235 (1255)
Q Consensus 1231 eLl~~ 1235 (1255)
++++.
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 99864
No 207
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-42 Score=383.74 Aligned_cols=220 Identities=31% Similarity=0.517 Sum_probs=188.3
Q ss_pred cccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCC--C
Q 000846 1006 RGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRN--Y 1078 (1255)
Q Consensus 1006 ~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i 1078 (1255)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999963 4699999999999999999999999999999999999975 89999999999875 3
Q ss_pred CHHHHhcceEEEccCCCCCcccHHHHHhcCCC--CC--C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCCh
Q 000846 1079 NLKQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA--R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSG 1150 (1255)
Q Consensus 1079 ~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~--~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSg 1150 (1255)
+...+|++++|+||+|.+|..|++||+.++.. .. + ++++.++++..++.+++. ......+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 45678899999999999998999999986421 10 1 234455566555543322 223455678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCH
Q 000846 1151 GQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSH 1229 (1255)
Q Consensus 1151 GQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~ 1229 (1255)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998778899999999999855 899999999999999999
Q ss_pred HHHHhh
Q 000846 1230 NELVAL 1235 (1255)
Q Consensus 1230 ~eLl~~ 1235 (1255)
++++..
T Consensus 247 ~~~~~~ 252 (267)
T PRK14235 247 EKMFTN 252 (267)
T ss_pred HHHHhC
Confidence 999854
No 208
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.2e-42 Score=395.31 Aligned_cols=216 Identities=28% Similarity=0.447 Sum_probs=185.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|++||.++...+. .+++|+
T Consensus 3 L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 3 IEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 889999999963 359999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEccCCCCCc-ccHHHHHhcCCCC------CCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHH
Q 000846 1089 LVSQEPTLFA-GTIRENIAYGKAD------ARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1089 ~V~Qdp~LF~-gTIreNl~~g~~~------~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrla 1157 (1255)
||||++.+|. .|++||+.++... .+. +++.++++..++.++ ......+||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHL-----------ADRYPAQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHHH
Confidence 9999999997 5999999986321 122 234444554444333 23345689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||||+++|++||||||||+||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998764 7899999999998765 99999999999999999999987
Q ss_pred hhcCchh
Q 000846 1235 LSRGGAY 1241 (1255)
Q Consensus 1235 ~~~~g~y 1241 (1255)
. +...|
T Consensus 227 ~-p~~~~ 232 (353)
T PRK10851 227 E-PATRF 232 (353)
T ss_pred C-ccchH
Confidence 5 44444
No 209
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4e-42 Score=377.60 Aligned_cols=210 Identities=38% Similarity=0.576 Sum_probs=178.0
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhccc-----CCCccEEEECCeecCCCC--HH
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFY-----DPVEGEVLLDGYKIRRLH--LK 417 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~-----~~~~G~i~~~g~~~~~~~--~~ 417 (1255)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 478999999964 35999999999999999999999999999999999999 999999999999987766 56
Q ss_pred HHhcccEEeccCCccCcccHHHHhccCCCCC---C----HHHHHHHHHHhchHHHHhcCCCcccchhcCC--CCCCChHH
Q 000846 418 WLRSQMGLVNQEPVLFATSITENILFGKDGA---S----MDDVISAAKAANAHDFITKLPDGYETQVGQL--GFQMSGGQ 488 (1255)
Q Consensus 418 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~--g~~LSgGq 488 (1255)
.++++++|++|++.+|..|++||+.++.... . .+++.++++.. |++...... +.+|||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~~~LSgG~ 146 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKA-----------ALWDEVKDRLHALGLSGGQ 146 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHc-----------CCChHHhccCCcccCCHHH
Confidence 6788999999999999779999998753211 1 11222333333 343333333 47999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhH
Q 000846 489 KQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNE 567 (1255)
Q Consensus 489 rqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~ 567 (1255)
|||++|||||+++|++|||||||++||+.+++.+.+.|+++.+.+|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 147 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 147 QQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 9999999999999999999999999999999999999998865589999999999875 599999999999999998765
Q ss_pred H
Q 000846 568 L 568 (1255)
Q Consensus 568 l 568 (1255)
+
T Consensus 227 ~ 227 (227)
T cd03260 227 I 227 (227)
T ss_pred C
Confidence 3
No 210
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-42 Score=386.35 Aligned_cols=219 Identities=32% Similarity=0.524 Sum_probs=182.6
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCC----CCHHH
Q 000846 1009 IELKNVFFAYPTRP--DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRN----YNLKQ 1082 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~--~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~~~~ 1082 (1255)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996421 1469999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEccCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHcccccccc-ccCCCCCCCChHHHHHHH
Q 000846 1083 LRSHIALVSQEP--TLFAGTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDT-YCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1083 lR~~i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt-~vge~G~~LSgGQkQrla 1157 (1255)
.|++|+||||+| .+|+.|++||+.++.. ..+.++..+. +.+.++.+ |++. .......+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQK-----AREMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 888999999998 6888999999987632 2233332221 11222222 3331 224456789999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||||+.+|+||||||||++||+.+...+.+.|++..+ |.|||+|||+++.+. .||||++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999998753 789999999999985 499999999999999999999875
No 211
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-42 Score=395.49 Aligned_cols=220 Identities=33% Similarity=0.594 Sum_probs=187.2
Q ss_pred EEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH---Hh
Q 000846 345 IEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW---LR 420 (1255)
Q Consensus 345 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~r 420 (1255)
|+++|++++|+... +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997311 346999999999999999999999999999999999999999999999999998876543 47
Q ss_pred cccEEeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHH
Q 000846 421 SQMGLVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARA 497 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARa 497 (1255)
++|+||+|++.+|. .|++||+.++.. ..+.++.. ..+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIK-----ARVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999987 599999987532 11222211 1223445554 56555666778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhcc
Q 000846 498 LIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 498 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
|+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999998743 8999999999999865 999999999999999999999765
No 212
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=7e-42 Score=379.96 Aligned_cols=212 Identities=32% Similarity=0.512 Sum_probs=180.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCH---HHHhc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNL---KQLRS 1085 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1085 (1255)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 3469999999999999999999999999999999999999999999999999987654 34688
Q ss_pred ceEEEccCCCCCc-ccHHHHHhcCCCCC-----------C---HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCCh
Q 000846 1086 HIALVSQEPTLFA-GTIRENIAYGKADA-----------R---ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSG 1150 (1255)
Q Consensus 1086 ~i~~V~Qdp~LF~-gTIreNl~~g~~~~-----------~---~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSg 1150 (1255)
+++||||++.+|. .|++||+.++.... . ++++.++++..+ ++........+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVG-----------LADKAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcC-----------cHhhhcCCcccCCH
Confidence 9999999998886 69999998653210 1 122333333333 33334455678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000846 1151 GQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1151 GQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1227 (1255)
|||||++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.+ ||++++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999875 37899999999999854 9999999999999999
Q ss_pred CHHHHH
Q 000846 1228 SHNELV 1233 (1255)
Q Consensus 1228 ~~~eLl 1233 (1255)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999973
No 213
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-42 Score=374.45 Aligned_cols=203 Identities=36% Similarity=0.578 Sum_probs=172.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ..+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEE
Confidence 478999999963 46999999999999999999999999999999999999999999999999998654 3577899
Q ss_pred EEccCCCCCc-ccHHHHHhcCCCC--CCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFA-GTIRENIAYGKAD--ARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~-gTIreNl~~g~~~--~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
|+||+|.+|. .|++||+.++... .+. +++.++++..++ +........+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGL-----------EGLLNRYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCC-----------hhhhhcChhhCCHHHHHHHHHHHH
Confidence 9999998886 6999999765321 111 233344444443 333344456899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1227 (1255)
|+++|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.+ ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999875 38999999999998765 9999999999999876
No 214
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-42 Score=379.18 Aligned_cols=218 Identities=34% Similarity=0.591 Sum_probs=184.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999641 46999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHcccccccc--ccCCCCCCCChHHHHHHHHHHHHc
Q 000846 1089 LVSQEPTLFA-GTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDT--YCGERGVQLSGGQKQRIALARAIL 1163 (1255)
Q Consensus 1089 ~V~Qdp~LF~-gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt--~vge~G~~LSgGQkQrlalARALl 1163 (1255)
|+||+|.+|. .|++||+.++.. ..+.++. ...+.+++..+ |++. .....+.+||||||||++||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999986 699999976521 1111111 11223333333 3332 345566789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1164 KNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1164 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999999998753 8999999999998754 999999999999999999999764
No 215
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6.3e-42 Score=395.48 Aligned_cols=218 Identities=31% Similarity=0.512 Sum_probs=186.5
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCC--ceEEECCeecCCCCHHHHh
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLK--GSVFMDEQDIRNYNLKQLR 1084 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~--G~I~idG~di~~i~~~~lR 1084 (1255)
|.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++...+. .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 57999999999963 369999999999999999999999999999999999999999 999999999987665 36
Q ss_pred cceEEEccCCCCCcc-cHHHHHhcCCC--CCCHH----HHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHH
Q 000846 1085 SHIALVSQEPTLFAG-TIRENIAYGKA--DARES----EIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~g-TIreNl~~g~~--~~~~~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrla 1157 (1255)
++|+||+|++.+|.. |++|||.|+.. ..+.+ ++.++++..++.++ ......+||||||||+|
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~-----------~~~~~~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDA-----------AAHLPAQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCch-----------hhCChhhCCHHHHHHHH
Confidence 789999999999975 99999987632 12222 33444444444333 34445689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC---CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM---GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~---~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
|||||+++|+|||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|++++.|+++++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999998754 6899999999998754 9999999999999999999998
Q ss_pred hhhcCchh
Q 000846 1234 ALSRGGAY 1241 (1255)
Q Consensus 1234 ~~~~~g~y 1241 (1255)
+. +...|
T Consensus 228 ~~-p~~~~ 234 (362)
T TIGR03258 228 DA-PADGF 234 (362)
T ss_pred hC-cCcHH
Confidence 75 44444
No 216
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-42 Score=380.64 Aligned_cols=225 Identities=28% Similarity=0.436 Sum_probs=189.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCCCCHHH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRNYNLKQ 1082 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~~~~ 1082 (1255)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 3899999999963 3699999999999999999999999999999999999974 6999999999999888888
Q ss_pred HhcceEEEccCCCCC-cccHHHHHhcCCC--C--CC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1083 LRSHIALVSQEPTLF-AGTIRENIAYGKA--D--AR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1083 lR~~i~~V~Qdp~LF-~gTIreNl~~g~~--~--~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
+|++|+|+||+|.+| +.|++||+.++.. . .. ++++.++++..++.+.+. ........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCcccCCHHHH
Confidence 999999999999755 6799999986531 1 01 234455555555433221 122344567999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999985 5999999999999999999999
Q ss_pred HhhhcCchhHH
Q 000846 1233 VALSRGGAYYS 1243 (1255)
Q Consensus 1233 l~~~~~g~y~~ 1243 (1255)
.+. +...+.+
T Consensus 233 ~~~-~~~~~~~ 242 (250)
T PRK14247 233 FTN-PRHELTE 242 (250)
T ss_pred HcC-CccHHHH
Confidence 864 3333433
No 217
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=384.13 Aligned_cols=219 Identities=32% Similarity=0.560 Sum_probs=185.4
Q ss_pred EEEEeEEEEcCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCC--HHHHh
Q 000846 345 IEFRDVYFCYPSRP--DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLH--LKWLR 420 (1255)
Q Consensus 345 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~--~~~~r 420 (1255)
|+++||+++|+... .+++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 146999999999999999999999999999999999999999999999999997654 35678
Q ss_pred cccEEeccCC--ccCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCccc--chhcCCCCCCChHHHHHHHH
Q 000846 421 SQMGLVNQEP--VLFATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYE--TQVGQLGFQMSGGQKQRIAI 494 (1255)
Q Consensus 421 ~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~--t~~~~~g~~LSgGqrqri~l 494 (1255)
++||||||+| .+|+.|++|||.++.. ..+.++..+. +.+.++.+ |+. +.....+.+||||||||++|
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~i 155 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIV--GLDYEDYKDKSPFELSGGQKRRVAI 155 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHc--CCCchhhccCCcccCCHHHHHHHHH
Confidence 8999999998 5788899999998632 1233322221 12333433 554 45667788999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 495 ARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 495 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
||||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 156 AraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 156 AGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999998743 899999999999885 699999999999999999999865
No 218
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-42 Score=377.28 Aligned_cols=215 Identities=35% Similarity=0.519 Sum_probs=182.4
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHH---HHh
Q 000846 1009 IELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLK---QLR 1084 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 1084 (1255)
|+++|++++|+.+. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996421 12699999999999999999999999999999999999999999999999999877654 357
Q ss_pred cceEEEccCCCCCc-ccHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHH
Q 000846 1085 SHIALVSQEPTLFA-GTIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrla 1157 (1255)
++++|+||+|.+|. .|++||+.++.. ..+ .+++.++++..++ +........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGL-----------EDKADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCC-----------hhhhhcChhhCCHHHHHHHH
Confidence 89999999999997 699999976421 111 2233444444443 33334455789999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||++++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999865 99999999999999999999865
No 219
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=6.1e-42 Score=378.70 Aligned_cols=221 Identities=29% Similarity=0.506 Sum_probs=187.4
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH-Hhccc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW-LRSQM 423 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 423 (1255)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 35999999999999999999999999999999999999999999999999998877654 35679
Q ss_pred EEeccCCccCcc-cHHHHhccCCCCCCHHHH-------HHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDGASMDDV-------ISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~-------~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
+|++|++.+|.+ |++||+.++........+ ........+++.++.+ |++...+....+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999987 999999876421110000 0011112334556666 777777888899999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|||+.+|+++||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 99999999999999999999999999999998875 68999999999999865 99999999999999999998865
No 220
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.2e-41 Score=394.51 Aligned_cols=217 Identities=33% Similarity=0.544 Sum_probs=188.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+.. +++|
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4999999999963 4589999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFAG-TIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1088 ~~V~Qdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
+||+|++.+|.. |++|||.|+.. ..+ .+++.++++..++.++.... ..+||||||||+||||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------p~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRK-----------PHQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHHHHH
Confidence 999999999965 99999998642 122 23455566666666555444 3579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHhhhc
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVALSR 1237 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~~~~ 1237 (1255)
||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++++. +
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~-p 236 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE-P 236 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-c
Confidence 99999999999999999999999999999998764 789999999999875 5999999999999999999999875 4
Q ss_pred Cchh
Q 000846 1238 GGAY 1241 (1255)
Q Consensus 1238 ~g~y 1241 (1255)
...|
T Consensus 237 ~~~~ 240 (375)
T PRK09452 237 KNLF 240 (375)
T ss_pred ccHH
Confidence 4444
No 221
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=9.7e-42 Score=382.56 Aligned_cols=239 Identities=34% Similarity=0.492 Sum_probs=190.5
Q ss_pred EEEEEEEEECCCC------CCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH
Q 000846 1009 IELKNVFFAYPTR------PDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ 1082 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~------~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~ 1082 (1255)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 1356999999999999999999999999999999999999999999999999998876543
Q ss_pred ---HhcceEEEccCCC--CC-cccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHccccccc-cccCCCCCCCChHH
Q 000846 1083 ---LRSHIALVSQEPT--LF-AGTIRENIAYGKA---DARESEIKKAAVLANAHEFISGMKDGYD-TYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1083 ---lR~~i~~V~Qdp~--LF-~gTIreNl~~g~~---~~~~~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgGQ 1152 (1255)
+|++|+|+||+|. ++ ..|++||+.++.. ....++. ...+.++++.+ |++ ......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQ-----KARIAELLDMV--GLRSEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCChhhhhCChhhCCHHH
Confidence 6788999999983 44 4799999964311 1111111 11122333333 343 23345667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCH
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSH 1229 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~ 1229 (1255)
|||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 9999999999999999999999999999999999999998753 7899999999999975 999999999999999999
Q ss_pred HHHHhhhcCchhHHHHhhhcCCCCCC
Q 000846 1230 NELVALSRGGAYYSLIKPQGGSSPFR 1255 (1255)
Q Consensus 1230 ~eLl~~~~~g~y~~l~~~~~~~~~~~ 1255 (1255)
++++.. ++..+..+...-....|+|
T Consensus 236 ~~~~~~-~~~~~~~~~~~~~~~~~~~ 260 (265)
T TIGR02769 236 AQLLSF-KHPAGRNLQSAVLPEHPVR 260 (265)
T ss_pred HHHcCC-CCHHHHHHHHhccCCCCcc
Confidence 999864 3344444554444445554
No 222
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.2e-41 Score=394.41 Aligned_cols=215 Identities=30% Similarity=0.506 Sum_probs=184.9
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcc
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQ 422 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 422 (1255)
..++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++...++. ++.
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRH 87 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 35999999999963 3589999999999999999999999999999999999999999999999999876654 468
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCC--CCH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDG--ASM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
++||+|++.+|+. ||+|||.|+... .+. +++.++++..+ ++........+|||||||||+||
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~p~~LSgGq~QRVaLA 156 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQ-----------LEEFAQRKPHQLSGGQQQRVAIA 156 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcC-----------CchhhhCChhhCCHHHHHHHHHH
Confidence 9999999999976 999999987531 122 22333444444 44444455579999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccC
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
|||+.+|++||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++..++
T Consensus 157 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 157 RAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 999999999999999999999999999999998753 899999999999875 59999999999999999999998764
Q ss_pred C
Q 000846 573 E 573 (1255)
Q Consensus 573 ~ 573 (1255)
.
T Consensus 237 ~ 237 (375)
T PRK09452 237 K 237 (375)
T ss_pred c
Confidence 3
No 223
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-41 Score=385.26 Aligned_cols=214 Identities=29% Similarity=0.521 Sum_probs=184.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecC--CCCHHHHhc
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIR--NYNLKQLRS 1085 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~--~i~~~~lR~ 1085 (1255)
-|+++||+++|+. ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 3899999999962 346999999999999999999999999999999999999999999999999984 344567899
Q ss_pred ceEEEccCC--CCCcccHHHHHhcCCC--CCCHH----HHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHH
Q 000846 1086 HIALVSQEP--TLFAGTIRENIAYGKA--DARES----EIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1086 ~i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrla 1157 (1255)
+|+|+||+| .+|+.|++||+.++.. ..+.+ .+.++++..++.+ .......+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEH-----------LKDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhCCcccCCHHHHHHHH
Confidence 999999998 5788999999987532 22322 3344444444433 234456789999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998764 899999999999986 599999999999999999999876
No 224
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-41 Score=380.56 Aligned_cols=219 Identities=34% Similarity=0.511 Sum_probs=186.6
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCC--CC
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRN--YN 1079 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1079 (1255)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 35999999999963 469999999999999999999999999999999999997 689999999999863 56
Q ss_pred HHHHhcceEEEccCCCCCcccHHHHHhcCCCC--CC---HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHH
Q 000846 1080 LKQLRSHIALVSQEPTLFAGTIRENIAYGKAD--AR---ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQ 1154 (1255)
Q Consensus 1080 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~--~~---~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQ 1154 (1255)
...+|++++||||++.+|..|++||+.++... .. ++++.++++..++.+ +++........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-------ECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-------hhhhhhCCCcccCCHHHHH
Confidence 67789999999999999999999999875421 11 233444555554432 2223344556789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeC-----------CE
Q 000846 1155 RIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQ-KSDTIAVIKN-----------GR 1222 (1255)
Q Consensus 1155 rlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~-----------G~ 1222 (1255)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+. .||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 99999999999999999999999999999999999999877899999999999885 4999999996 67
Q ss_pred EEEecCHHHHHhh
Q 000846 1223 VVEQGSHNELVAL 1235 (1255)
Q Consensus 1223 ive~G~~~eLl~~ 1235 (1255)
++|.|+++++++.
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 9999999999864
No 225
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-41 Score=367.38 Aligned_cols=200 Identities=37% Similarity=0.558 Sum_probs=181.6
Q ss_pred EEEEEEEEECCCCCC--CccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcc
Q 000846 1009 IELKNVFFAYPTRPD--QMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSH 1086 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~--~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1086 (1255)
|+++||+++|++..+ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999964311 3699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 000846 1087 IALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNP 1166 (1255)
Q Consensus 1087 i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p 1166 (1255)
|+|+||+|.+|++|++||+.++.. .++++..++++.+++.+++..+|.|+++.+++.+.+||+|||||++|||||+.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999988643 3456777888888999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHH-HHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000846 1167 SILLLDEATSALDSVSESLVQE-ALEKMM-MGRTCVVVAHRLSTIQKSDTIAVIKNGR 1222 (1255)
Q Consensus 1167 ~ILlLDEaTSaLD~~te~~I~~-~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ 1222 (1255)
+++||||||++||+++.+.+.+ .+++.. +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 466553 4689999999999998899999999985
No 226
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=377.79 Aligned_cols=218 Identities=29% Similarity=0.489 Sum_probs=185.5
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC---CCccEEEECCeecCCCCHHHHh
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD---PVEGEVLLDGYKIRRLHLKWLR 420 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~---~~~G~i~~~g~~~~~~~~~~~r 420 (1255)
.|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.+.+....|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 4789999999973 359999999999999999999999999999999999984 6999999999999887777888
Q ss_pred cccEEeccCCccCcccHHHHhccCCCC--C---C---HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHH
Q 000846 421 SQMGLVNQEPVLFATSITENILFGKDG--A---S---MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~---~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri 492 (1255)
++++|++|+|.+|+.|++||+.++... . . .+++.+.++..++.+++ .+...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-------KDKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-------hHHhcCCcccCCHHHHHHH
Confidence 899999999999999999999875311 0 0 11122223333332211 2345667789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
+||||++++|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999999998877899999999999885 5999999999999999999998754
No 227
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=384.62 Aligned_cols=217 Identities=27% Similarity=0.487 Sum_probs=187.0
Q ss_pred cEEEEEEEEECCCCC---CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCC-HHHH
Q 000846 1008 RIELKNVFFAYPTRP---DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYN-LKQL 1083 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~---~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~l 1083 (1255)
-|+++|++++|++.. ++++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999997654 3567
Q ss_pred hcceEEEccCCC--CCcccHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHH
Q 000846 1084 RSHIALVSQEPT--LFAGTIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQR 1155 (1255)
Q Consensus 1084 R~~i~~V~Qdp~--LF~gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQr 1155 (1255)
|++++||||+|. +|..|+.+|+.++.. ..+ ++++.++++..++.++... ...+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRH-----------APHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHH
Confidence 899999999984 777799999987621 112 2345556666666555433 346799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHH
Q 000846 1156 IALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1156 lalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
++|||||+++|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999875 389999999999999889999999999999999999997
Q ss_pred hh
Q 000846 1234 AL 1235 (1255)
Q Consensus 1234 ~~ 1235 (1255)
+.
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 53
No 228
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-42 Score=375.92 Aligned_cols=210 Identities=28% Similarity=0.450 Sum_probs=178.1
Q ss_pred cEEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH---H
Q 000846 1008 RIELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ---L 1083 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---l 1083 (1255)
-++++||+++|+.+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999997422 146999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cceEEEccCCCCCcc-cHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHH
Q 000846 1084 R-SHIALVSQEPTLFAG-TIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQR 1155 (1255)
Q Consensus 1084 R-~~i~~V~Qdp~LF~g-TIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQr 1155 (1255)
| +.++|+||+|.+|.. |++||+.++.. .... +++.++++.. |++........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAV-----------GLEHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhhCChhhCCHHHHHH
Confidence 3 679999999998875 99999976321 1122 2233333333 34444455567899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000846 1156 IALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGS 1228 (1255)
Q Consensus 1156 lalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~ 1228 (1255)
++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+..+|++++|++|++++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4899999999999999999999999999998775
No 229
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.2e-41 Score=379.52 Aligned_cols=213 Identities=29% Similarity=0.466 Sum_probs=182.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCC---------
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYN--------- 1079 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--------- 1079 (1255)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999963 46999999999999999999999999999999999999999999999999987653
Q ss_pred ----HHHHhcceEEEccCCCCCc-ccHHHHHhcCCC---CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCC
Q 000846 1080 ----LKQLRSHIALVSQEPTLFA-GTIRENIAYGKA---DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQ 1147 (1255)
Q Consensus 1080 ----~~~lR~~i~~V~Qdp~LF~-gTIreNl~~g~~---~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~ 1147 (1255)
...+|++++|++|++.+|. .|++||+.++.. .... +++.++++..+ ++........+
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVG-----------LADKADHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------ChhHhhcChhh
Confidence 2467889999999999885 799999987421 1121 23333343333 33334455678
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEE
Q 000846 1148 LSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVV 1224 (1255)
Q Consensus 1148 LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~iv 1224 (1255)
||||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 789999999999985 49999999999999
Q ss_pred EecCHHHHHhh
Q 000846 1225 EQGSHNELVAL 1235 (1255)
Q Consensus 1225 e~G~~~eLl~~ 1235 (1255)
+.|+++++.+.
T Consensus 227 ~~g~~~~~~~~ 237 (252)
T TIGR03005 227 EQGKPDEIFRQ 237 (252)
T ss_pred EeCCHHHHhcC
Confidence 99999999864
No 230
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=8.7e-42 Score=376.43 Aligned_cols=216 Identities=26% Similarity=0.472 Sum_probs=183.9
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH-Hhcce
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ-LRSHI 1087 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 1087 (1255)
|+++||+++|++ +++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 578999999963 36999999999999999999999999999999999999999999999999998877655 45789
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 000846 1088 ALVSQEPTLFAG-TIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILK 1164 (1255)
Q Consensus 1088 ~~V~Qdp~LF~g-TIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr 1164 (1255)
+|+||++.+|.+ |++||+.++.+ ....++.. ..+.+++..+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 99999986532 11222211 1233444443 55555566678899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1165 NPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1165 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999999875 47899999999987755 99999999999999999999864
No 231
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=382.43 Aligned_cols=216 Identities=30% Similarity=0.548 Sum_probs=186.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++|++++|++. ++++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 48999999999632 34699999999999999999999999999999999999999999999999999888878889999
Q ss_pred EEEccCC--CCCcccHHHHHhcCCC--CCCHHH----HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHH
Q 000846 1088 ALVSQEP--TLFAGTIRENIAYGKA--DARESE----IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALA 1159 (1255)
Q Consensus 1088 ~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalA 1159 (1255)
+|+||+| .++..|++||+.++.. ..+.++ +.++++..++.++ ......+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDY-----------LDKEPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCCcccCCHHHHHHHHHH
Confidence 9999998 4567899999987532 123332 3334444444333 3445578999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1160 RAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1160 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++++.
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 4899999999999988999999999999999999998763
No 232
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=382.35 Aligned_cols=218 Identities=29% Similarity=0.487 Sum_probs=183.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1080 (1255)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 4999999999963 469999999999999999999999999999999999875 789999999999865 344
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC---CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA---DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~---~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|++++|+||++.+|.+|++||+.++.. ... ++.+.++++..++.+.+ .........+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccCCHHHH
Confidence 567889999999999999999999986521 101 12334444444332111 1223455678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999877789999999999876 4999999999999999999999
Q ss_pred Hhh
Q 000846 1233 VAL 1235 (1255)
Q Consensus 1233 l~~ 1235 (1255)
+..
T Consensus 251 ~~~ 253 (268)
T PRK14248 251 FTS 253 (268)
T ss_pred HhC
Confidence 864
No 233
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=385.36 Aligned_cols=216 Identities=28% Similarity=0.493 Sum_probs=181.9
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCC---------
Q 000846 1009 IELKNVFFAYPTRP--DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRN--------- 1077 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~--~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--------- 1077 (1255)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 88999999997431 1369999999999999999999999999999999999999999999999987632
Q ss_pred ---------------CCHHHHhcceEEEccCC--CCCcccHHHHHhcCCC--CCCHHH----HHHHHHHhcHHHHHHccc
Q 000846 1078 ---------------YNLKQLRSHIALVSQEP--TLFAGTIRENIAYGKA--DARESE----IKKAAVLANAHEFISGMK 1134 (1255)
Q Consensus 1078 ---------------i~~~~lR~~i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~e----i~~al~~a~l~~~i~~lp 1134 (1255)
.+...+|++||||||+| .+|..|++|||.++.. ..+.++ +.++++..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~g--------- 153 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVG--------- 153 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcC---------
Confidence 13467889999999986 6888999999987632 233333 333333333
Q ss_pred cccc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-h
Q 000846 1135 DGYD-TYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQ-K 1211 (1255)
Q Consensus 1135 ~gld-t~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~ 1211 (1255)
++ ........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. .|+|+|+|||+++.+. .
T Consensus 154 --L~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 154 --LDESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred --CChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 32 22345567899999999999999999999999999999999999999999999875 4899999999999874 5
Q ss_pred cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1212 SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1212 ~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
||||++|++|++++.|+++++.+.
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999998753
No 234
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.4e-41 Score=389.38 Aligned_cols=228 Identities=28% Similarity=0.415 Sum_probs=187.4
Q ss_pred cEEEEEEEEECCCCC----------CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCC
Q 000846 1008 RIELKNVFFAYPTRP----------DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRN 1077 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~----------~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~ 1077 (1255)
-|+++|++++|+.+. ..++++||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999998
Q ss_pred CCHH---HHhcceEEEccCC--CCC-cccHHHHHhcCC----CCCCHHHHHHHHHHhcHHHHHHccccccc-cccCCCCC
Q 000846 1078 YNLK---QLRSHIALVSQEP--TLF-AGTIRENIAYGK----ADARESEIKKAAVLANAHEFISGMKDGYD-TYCGERGV 1146 (1255)
Q Consensus 1078 i~~~---~lR~~i~~V~Qdp--~LF-~gTIreNl~~g~----~~~~~~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~ 1146 (1255)
++.. .+|++|+||+|+| .|| ..||.+||.++. +..+.++..+.++ +.++.+ |++ ........
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~-----~~l~~v--gl~~~~~~~~p~ 160 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVK-----AMMLKV--GLLPNLINRYPH 160 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHH-----HHHHHc--CCChHHhcCCcc
Confidence 8754 3678999999999 477 479999996531 1233333322211 222221 221 12344567
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000846 1147 QLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRV 1223 (1255)
Q Consensus 1147 ~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~i 1223 (1255)
+||||||||++|||||+.+|++||+||||++||+.+.+.|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|
T Consensus 161 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~i 240 (331)
T PRK15079 161 EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHA 240 (331)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999999998753 7899999999999976 999999999999
Q ss_pred EEecCHHHHHhhhcCchhHH
Q 000846 1224 VEQGSHNELVALSRGGAYYS 1243 (1255)
Q Consensus 1224 ve~G~~~eLl~~~~~g~y~~ 1243 (1255)
+|.|+++++++. +...|.+
T Consensus 241 ve~g~~~~i~~~-~~~py~~ 259 (331)
T PRK15079 241 VELGTYDEVYHN-PLHPYTK 259 (331)
T ss_pred EEEcCHHHHHcC-CCCHHHH
Confidence 999999999875 4555655
No 235
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=380.29 Aligned_cols=218 Identities=31% Similarity=0.511 Sum_probs=184.2
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCCC--CH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRNY--NL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1080 (1255)
.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 4699999999999999999999999999999999999985 799999999998653 24
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--CCCHH----HHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--DARES----EIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQ 1154 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~~~~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQ 1154 (1255)
..+|+.++|+||++.+|..|++||+.++.. ..+.+ ++.++++.+++.+.+ +.........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHHH
Confidence 567889999999999999999999986521 12222 234444444432211 12233456789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1155 RIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1155 rlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
|++|||||+.+|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999865 9999999999999999999997
Q ss_pred hh
Q 000846 1234 AL 1235 (1255)
Q Consensus 1234 ~~ 1235 (1255)
..
T Consensus 242 ~~ 243 (258)
T PRK14268 242 HN 243 (258)
T ss_pred cC
Confidence 64
No 236
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-42 Score=381.07 Aligned_cols=222 Identities=31% Similarity=0.520 Sum_probs=186.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCCCC--HH
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRNYN--LK 1081 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i~--~~ 1081 (1255)
=+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 468999999963 469999999999999999999999999999999999986 47999999999987653 34
Q ss_pred HHhcceEEEccCCCCCcccHHHHHhcCCC--CC------CHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1082 QLRSHIALVSQEPTLFAGTIRENIAYGKA--DA------RESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1082 ~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~------~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
.+|++++||||++.+|.+|++||+.++.. +. .++++.++++..++.+++ .+.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHH
Confidence 67889999999999999999999986521 11 123344445555443321 1234455678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred HhhhcCchh
Q 000846 1233 VALSRGGAY 1241 (1255)
Q Consensus 1233 l~~~~~g~y 1241 (1255)
++. +...|
T Consensus 236 ~~~-~~~~~ 243 (251)
T PRK14244 236 FKN-PQSSK 243 (251)
T ss_pred hcC-CCChH
Confidence 875 44444
No 237
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=382.47 Aligned_cols=216 Identities=27% Similarity=0.497 Sum_probs=188.0
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCC---ceEEECCeecCCCCHHHH
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLK---GSVFMDEQDIRNYNLKQL 1083 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~---G~I~idG~di~~i~~~~l 1083 (1255)
+.|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 359999999999642 2469999999999999999999999999999999999999988 899999999988777788
Q ss_pred hcceEEEccCC--CCCcccHHHHHhcCCC--CCCHH----HHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHH
Q 000846 1084 RSHIALVSQEP--TLFAGTIRENIAYGKA--DARES----EIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQR 1155 (1255)
Q Consensus 1084 R~~i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQr 1155 (1255)
|++|+||||+| .+++.|++|||.++.. ..+.+ ++.++++..++.++. .....+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYI-----------DSEPANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHHHHH
Confidence 99999999998 4678899999987632 22332 344555555555443 33446899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHH
Q 000846 1156 IALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1156 lalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|++++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998753 78999999999999889999999999999999999987
Q ss_pred h
Q 000846 1234 A 1234 (1255)
Q Consensus 1234 ~ 1234 (1255)
.
T Consensus 232 ~ 232 (282)
T PRK13640 232 S 232 (282)
T ss_pred c
Confidence 5
No 238
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=395.74 Aligned_cols=217 Identities=29% Similarity=0.513 Sum_probs=184.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCE
Confidence 3899999999963 459999999999999999999999999999999999999999999999999987665 35789
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
+||||++.+|. .|++||+.++.. ..+. +++.++++..++.++ ......+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~-----------~~~~~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHL-----------LDRKPKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHH
Confidence 99999999996 499999987632 1222 234445555444433 33345689999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhhhc
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVALSR 1237 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~~~ 1237 (1255)
||+++|+|||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++... +
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~-p 225 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY-P 225 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-c
Confidence 99999999999999999999999999999998753 7899999999998764 999999999999999999999874 4
Q ss_pred Cchh
Q 000846 1238 GGAY 1241 (1255)
Q Consensus 1238 ~g~y 1241 (1255)
...|
T Consensus 226 ~~~~ 229 (369)
T PRK11000 226 ANRF 229 (369)
T ss_pred ccHH
Confidence 4333
No 239
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=379.40 Aligned_cols=218 Identities=34% Similarity=0.554 Sum_probs=183.8
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1080 (1255)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 3899999999963 369999999999999999999999999999999999997 479999999999864 345
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--CCC-----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--DAR-----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~~-----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|+.++|++|++.+|+.|++||+.++.. ... ++++.++++..+++... + ........+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~----~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---K----DNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---H----HHhccChhhCCHHHH
Confidence 667889999999999999999999986532 111 12334444444442110 1 112345678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred Hhh
Q 000846 1233 VAL 1235 (1255)
Q Consensus 1233 l~~ 1235 (1255)
...
T Consensus 234 ~~~ 236 (251)
T PRK14251 234 FIA 236 (251)
T ss_pred HhC
Confidence 764
No 240
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.6e-42 Score=369.47 Aligned_cols=199 Identities=30% Similarity=0.521 Sum_probs=171.8
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEE
Q 000846 1010 ELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIAL 1089 (1255)
Q Consensus 1010 ~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1089 (1255)
+++||+++|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. ...|++|+|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999631 469999999999999999999999999999999999999999999999999864 456789999
Q ss_pred EccCC--CCCcccHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 000846 1090 VSQEP--TLFAGTIRENIAYGKADA--RESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN 1165 (1255)
Q Consensus 1090 V~Qdp--~LF~gTIreNl~~g~~~~--~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~ 1165 (1255)
+||+| .+|..|++||+.++.+.. .++++.++++..++.++... ....||||||||++|||||+++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKER-----------HPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCC-----------CchhCCHHHHHHHHHHHHHHhC
Confidence 99998 467899999998764322 23456666666666554333 3357999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 000846 1166 PSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVV 1224 (1255)
Q Consensus 1166 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~iv 1224 (1255)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999874 57899999999999875 9999999999985
No 241
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=384.23 Aligned_cols=219 Identities=26% Similarity=0.510 Sum_probs=184.5
Q ss_pred EEEEeEEEEcCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCC----CCHHH
Q 000846 345 IEFRDVYFCYPSRP--DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRR----LHLKW 418 (1255)
Q Consensus 345 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~----~~~~~ 418 (1255)
|+++||+|+|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997421 1359999999999999999999999999999999999999999999999999863 33567
Q ss_pred HhcccEEeccCC--ccCcccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCCCCChHHHHHHH
Q 000846 419 LRSQMGLVNQEP--VLFATSITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGFQMSGGQKQRIA 493 (1255)
Q Consensus 419 ~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqrqri~ 493 (1255)
+|+.++||+|+| .+|..||.||+.|+... .+.++..+ .+.+.++.+ |++ ........+||||||||++
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrva 154 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMV--GLADEFWEKSPFELSGGQMRRVA 154 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhccCCcccCCHHHHHHHH
Confidence 888999999998 78889999999987432 22222221 112333333 443 2446677899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 494 IARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 494 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+. .||+|++|++|+++++|+++++..
T Consensus 155 iA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 155 IAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 9999999999999999999999999999999998875 4899999999999885 599999999999999999999865
No 242
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-41 Score=378.60 Aligned_cols=218 Identities=28% Similarity=0.475 Sum_probs=183.8
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CCceEEECCeecCCC--CH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD--P---LKGSVFMDEQDIRNY--NL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~i--~~ 1080 (1255)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 369999999999999999999999999999999999954 6 499999999998643 34
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|++++||||+|.+|+.|++||+.++.. .. . ++++.++++..++.+.+ .+.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEV-------KDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhH-------HHHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1 22333444444443222 2234556678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998865 999999999999999999999
Q ss_pred Hhh
Q 000846 1233 VAL 1235 (1255)
Q Consensus 1233 l~~ 1235 (1255)
++.
T Consensus 235 ~~~ 237 (252)
T PRK14239 235 FMN 237 (252)
T ss_pred HhC
Confidence 864
No 243
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=391.89 Aligned_cols=217 Identities=29% Similarity=0.493 Sum_probs=184.6
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++...+. .+++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 4889999999974 359999999999999999999999999999999999999999999999999977654 35689
Q ss_pred EEeccCCccCcc-cHHHHhccCCCC------CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDG------ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
+||+|++.+|+. |++||+.|+... .+.++.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalAr 149 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIK-----AKVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALAR 149 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 999999999975 999999987431 1112111 1122334443 4544556667899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccC
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
||+.+|++||||||||+||+.+++.+.+.|+++.+ |+|+|+|||+++.+. .||+|++|++|++++.|+++++..++
T Consensus 150 AL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p 228 (353)
T PRK10851 150 ALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREP 228 (353)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 99999999999999999999999999999998754 789999999999875 59999999999999999999998754
No 244
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=382.17 Aligned_cols=214 Identities=28% Similarity=0.505 Sum_probs=185.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
++++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998877788899999
Q ss_pred EEccCC--CCCcccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1089 LVSQEP--TLFAGTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1089 ~V~Qdp--~LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
||||+| .+|+.|++||+.++.. ..+. +.+.++++..++.++. ......||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELR-----------DRVPHHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHHHHHHHHHH
Confidence 999998 4788999999986532 2222 2344555555554443 2334689999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
||+.+|++|||||||++||+.+.+.+.+.+++..+ ++|+|++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999998753 799999999999985 5999999999999999999999753
No 245
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-41 Score=377.91 Aligned_cols=219 Identities=35% Similarity=0.565 Sum_probs=185.8
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCC--CC
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRN--YN 1079 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~ 1079 (1255)
|.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46999999999963 3699999999999999999999999999999999999863 69999999999875 45
Q ss_pred HHHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-----CHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHH
Q 000846 1080 LKQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-----RESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1080 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-----~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1152 (1255)
...+|++++|+||+|.+|+.|++||+.++.. .. .++++.++++.+++.+.+ .......+.+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEV-------KDRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------HHHHhcCCCCCCHHH
Confidence 5678999999999999999999999987521 11 123344444444443222 222345567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHH
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNE 1231 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~e 1231 (1255)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999998865 99999999999999999999
Q ss_pred HHhh
Q 000846 1232 LVAL 1235 (1255)
Q Consensus 1232 Ll~~ 1235 (1255)
+...
T Consensus 232 ~~~~ 235 (250)
T PRK14240 232 LFTN 235 (250)
T ss_pred HHhC
Confidence 9764
No 246
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.4e-41 Score=392.51 Aligned_cols=218 Identities=28% Similarity=0.457 Sum_probs=186.8
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCc--cEEEECCeecCCCCHHHHh
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVE--GEVLLDGYKIRRLHLKWLR 420 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~--G~i~~~g~~~~~~~~~~~r 420 (1255)
+.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.+.++ .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 57999999999973 359999999999999999999999999999999999999999 999999999977655 35
Q ss_pred cccEEeccCCccCcc-cHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHH
Q 000846 421 SQMGLVNQEPVLFAT-SITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARA 497 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARa 497 (1255)
+.|+||+|++.+|.. ||+|||.|+... ...++..+ .+.+.++.+ |++........+|||||||||+||||
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLARA 151 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLV--GLGDAAAHLPAQLSGGMQQRIAIARA 151 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHHH
Confidence 689999999999976 999999986431 12222211 123334444 55555666778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC---CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccC
Q 000846 498 LIRDPKILLLDEATSALDAQSERIVQEAIDKVSK---GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 498 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~---~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
|+.+|++||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++..++
T Consensus 152 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p 230 (362)
T TIGR03258 152 IAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAP 230 (362)
T ss_pred HhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 9999999999999999999999999999988753 789999999999975 59999999999999999999998753
No 247
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-41 Score=377.57 Aligned_cols=220 Identities=26% Similarity=0.493 Sum_probs=185.7
Q ss_pred cccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CCceEEECCeecCCC--
Q 000846 1006 RGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD--P---LKGSVFMDEQDIRNY-- 1078 (1255)
Q Consensus 1006 ~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~i-- 1078 (1255)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 356999999999963 469999999999999999999999999999999999986 4 689999999998653
Q ss_pred CHHHHhcceEEEccCCCCCc-ccHHHHHhcCCC--C-CC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCCh
Q 000846 1079 NLKQLRSHIALVSQEPTLFA-GTIRENIAYGKA--D-AR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSG 1150 (1255)
Q Consensus 1079 ~~~~lR~~i~~V~Qdp~LF~-gTIreNl~~g~~--~-~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSg 1150 (1255)
+...+|++|+|+||++.+|. .|++||+.++.. . .+ ++++.++++..++.+++. ...+..+.+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVK-------DRLKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcCcCCH
Confidence 34567899999999999988 599999976421 1 11 123444444555433322 123345678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCH
Q 000846 1151 GQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSH 1229 (1255)
Q Consensus 1151 GQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~ 1229 (1255)
|||||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998778999999999999854 999999999999999999
Q ss_pred HHHHhh
Q 000846 1230 NELVAL 1235 (1255)
Q Consensus 1230 ~eLl~~ 1235 (1255)
+++...
T Consensus 232 ~~~~~~ 237 (252)
T PRK14256 232 KKIFTT 237 (252)
T ss_pred HHHHhC
Confidence 999864
No 248
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-41 Score=380.00 Aligned_cols=219 Identities=30% Similarity=0.478 Sum_probs=187.8
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCC--CC
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRN--YN 1079 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1079 (1255)
..|+++||+++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 35999999999953 469999999999999999999999999999999999997 589999999999864 34
Q ss_pred HHHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHH
Q 000846 1080 LKQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1080 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1152 (1255)
...+|+.|+||||++.+|..|++||+.++.. .. + ++++.++++..++.+++ +...+..+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-------KDDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-------hhhhcCCcccCCHHH
Confidence 5678999999999999999999999987532 11 1 23344455555544333 233456678899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHH
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNE 1231 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~e 1231 (1255)
|||++||||++++|++|||||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999998854 99999999999999999999
Q ss_pred HHhh
Q 000846 1232 LVAL 1235 (1255)
Q Consensus 1232 Ll~~ 1235 (1255)
+.+.
T Consensus 249 ~~~~ 252 (267)
T PRK14237 249 IFTN 252 (267)
T ss_pred HhcC
Confidence 9763
No 249
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.7e-41 Score=364.26 Aligned_cols=204 Identities=36% Similarity=0.586 Sum_probs=180.4
Q ss_pred cceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhc
Q 000846 342 RGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRS 421 (1255)
Q Consensus 342 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~ 421 (1255)
.+.++++|++++|+.. ..++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+
T Consensus 4 ~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (207)
T cd03369 4 HGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRS 82 (207)
T ss_pred CCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHh
Confidence 4679999999999742 236999999999999999999999999999999999999999999999999998888778889
Q ss_pred ccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 422 QMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
+|+||+|+|.+|++|++||+.+... ...+++.++++ +++.+.+||||||||++||||++.+
T Consensus 83 ~i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~ 143 (207)
T cd03369 83 SLTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKR 143 (207)
T ss_pred hEEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhC
Confidence 9999999999999999999976432 23333332221 3456789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecCh
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSH 565 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~ 565 (1255)
|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 144 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 144 PRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 9999999999999999999999999988778999999999999877999999999999988764
No 250
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.7e-41 Score=370.43 Aligned_cols=207 Identities=25% Similarity=0.469 Sum_probs=175.6
Q ss_pred EEEEEEEEECCCCCC-CccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1009 IELKNVFFAYPTRPD-QMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~-~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
|+++||+++|+.+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 789999999974311 269999999999999999999999999999999999999999999999999976 456778999
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFAG-TIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1088 ~~V~Qdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
+|+||+|.+|.+ |++||+.+... ..+ ++++.++++..++ +........+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGM-----------EELLDRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------HHHHhhhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975421 112 2233444444444 33344456789999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1227 (1255)
|++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999875 48999999999998865 9999999999998865
No 251
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.7e-41 Score=374.16 Aligned_cols=217 Identities=31% Similarity=0.511 Sum_probs=183.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCC--CHHHHhcc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNY--NLKQLRSH 1086 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i--~~~~lR~~ 1086 (1255)
|+++|++++|++ .++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 789999999963 4699999999999999999999999999999999999999999999999998764 34567889
Q ss_pred eEEEccCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHH
Q 000846 1087 IALVSQEPTLFA-GTIRENIAYGKA---DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAI 1162 (1255)
Q Consensus 1087 i~~V~Qdp~LF~-gTIreNl~~g~~---~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARAL 1162 (1255)
++|+||++.+|. .|++||+.++.. ..+.++..+ .+.+.++.+ |++.........||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999998886 699999987531 112222111 122333333 444444555678999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1163 LKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1163 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
+++|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999999875 47999999999999865 999999999999999999999764
No 252
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-41 Score=369.23 Aligned_cols=203 Identities=27% Similarity=0.487 Sum_probs=175.9
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++||+++|++ .++|+|+||++++| ++||+||||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 579999999963 36999999999999 99999999999999999999999999999999999998776 67899999
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
|+||+|.+|.+ |++||+.+... ..+ ++++.++++..++.++ +++ ...+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~----~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDR-------AKK----KIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHH-------HhC----chhhCCHHHHHHHHHHHH
Confidence 99999999886 99999976321 111 2345555555555443 233 345799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1227 (1255)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998777999999999999865 9999999999999875
No 253
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-41 Score=376.12 Aligned_cols=227 Identities=29% Similarity=0.533 Sum_probs=189.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----CceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPL-----KGSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~~ 1080 (1255)
.|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 46999999999999999999999999999999999999997 6999999999864 345
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|+.++||||+|.+|+.|++||+.++.. .. . ++.+.++++..++.+++ +......+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-------KDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-------hhHhhCCcccCCHHHH
Confidence 678999999999999999999999987531 11 1 12333344444444332 2234566788999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988678999999999999876 799999999999999999999
Q ss_pred HhhhcCchhHHH
Q 000846 1233 VALSRGGAYYSL 1244 (1255)
Q Consensus 1233 l~~~~~g~y~~l 1244 (1255)
........++.+
T Consensus 234 ~~~~~~~~~~~~ 245 (251)
T PRK14249 234 FSRPRDKRTEDY 245 (251)
T ss_pred HhCCCChHHHHH
Confidence 764223334443
No 254
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=378.46 Aligned_cols=215 Identities=30% Similarity=0.496 Sum_probs=182.8
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCC--------
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNY-------- 1078 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i-------- 1078 (1255)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 56999999999963 4699999999999999999999999999999999999999999999999998642
Q ss_pred -----CHHHHhcceEEEccCCCCCc-ccHHHHHhcCCC---CCCH----HHHHHHHHHhcHHHHHHcccccccccc-CCC
Q 000846 1079 -----NLKQLRSHIALVSQEPTLFA-GTIRENIAYGKA---DARE----SEIKKAAVLANAHEFISGMKDGYDTYC-GER 1144 (1255)
Q Consensus 1079 -----~~~~lR~~i~~V~Qdp~LF~-gTIreNl~~g~~---~~~~----~ei~~al~~a~l~~~i~~lp~gldt~v-ge~ 1144 (1255)
....+|++++||||++.+|. .|++||+.++.. .... +++.++++..+ ++... ...
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~ 149 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVG-----------IDERAQGKY 149 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-----------CChhhhhCC
Confidence 13567889999999999997 499999976421 1111 22333333333 33322 455
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 000846 1145 GVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGR 1222 (1255)
Q Consensus 1145 G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ 1222 (1255)
..+||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|+
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 67899999999999999999999999999999999999999999999875 48999999999999986 99999999999
Q ss_pred EEEecCHHHHHhh
Q 000846 1223 VVEQGSHNELVAL 1235 (1255)
Q Consensus 1223 ive~G~~~eLl~~ 1235 (1255)
+++.|+++++++.
T Consensus 230 i~~~~~~~~~~~~ 242 (257)
T PRK10619 230 IEEEGAPEQLFGN 242 (257)
T ss_pred EEEeCCHHHhhhC
Confidence 9999999999864
No 255
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=379.22 Aligned_cols=218 Identities=32% Similarity=0.489 Sum_probs=184.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CCceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD--P---LKGSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--i~~ 1080 (1255)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999963 369999999999999999999999999999999999997 3 58999999999864 445
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--C-CCHH----HHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--D-ARES----EIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~-~~~~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|++++|+||++.+|.+|++||+.++.. . .+++ ++.++++..++.+++. ......+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 678899999999999999999999976521 1 1222 2333344444433221 223456678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred Hhh
Q 000846 1233 VAL 1235 (1255)
Q Consensus 1233 l~~ 1235 (1255)
+++
T Consensus 242 ~~~ 244 (259)
T PRK14274 242 FSN 244 (259)
T ss_pred hhC
Confidence 864
No 256
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.7e-41 Score=378.44 Aligned_cols=217 Identities=34% Similarity=0.534 Sum_probs=182.7
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCC--------H
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYN--------L 1080 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--------~ 1080 (1255)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 899999999963 36999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcceEEEccCCCCCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1081 KQLRSHIALVSQEPTLFA-GTIRENIAYGK---ADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~-gTIreNl~~g~---~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
..+|++++||||++.+|. .|++||+.++. .....++..+ .+.++++.+ |++........+||||||||+
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv 153 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKV--GLAGKETSYPRRLSGGQQQRV 153 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCcchhhCChhhCChHHHHHH
Confidence 567889999999999886 69999997642 1112222211 122333333 444444556788999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
+|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999875 48899999999999865 99999999999999999999976
Q ss_pred h
Q 000846 1235 L 1235 (1255)
Q Consensus 1235 ~ 1235 (1255)
.
T Consensus 234 ~ 234 (250)
T PRK11264 234 D 234 (250)
T ss_pred C
Confidence 4
No 257
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=374.31 Aligned_cols=218 Identities=26% Similarity=0.417 Sum_probs=181.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH-Hhcc
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ-LRSH 1086 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~ 1086 (1255)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 3899999999963 46999999999999999999999999999999999999999999999999998887654 6788
Q ss_pred eEEEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 000846 1087 IALVSQEPTLFAG-TIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN 1165 (1255)
Q Consensus 1087 i~~V~Qdp~LF~g-TIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~ 1165 (1255)
++|+||++.+|.+ |++||+.++....+.++..+.+ .+++..++ +++.........||||||||++||||++++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 9999998754222222222211 11222221 111112334568999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000846 1166 PSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1166 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|+||||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999999875 4899999999999765 599999999999999999999974
No 258
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-42 Score=360.68 Aligned_cols=227 Identities=32% Similarity=0.532 Sum_probs=194.9
Q ss_pred eEEEEeEEEEcCCCCC---------------------CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCcc
Q 000846 344 EIEFRDVYFCYPSRPD---------------------TLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEG 402 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~---------------------~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 402 (1255)
.|+++||++-|+.++. ..-++|+||+|+.||+..|.|-||||||||++++.|+++|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 5889999998875421 1248999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHH----hcccEEeccCCccCcc-cHHHHhccCCCC------CCHHHHHHHHHHhchHHHHhcCCC
Q 000846 403 EVLLDGYKIRRLHLKWL----RSQMGLVNQEPVLFAT-SITENILFGKDG------ASMDDVISAAKAANAHDFITKLPD 471 (1255)
Q Consensus 403 ~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~l~~ 471 (1255)
+|.+||.|+..++.++| |+++++|+|+..|++- ||.||..||.+- .+.+...++++.++++++-.+.|
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp- 162 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP- 162 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc-
Confidence 99999999999987765 3589999999999976 999999999751 12334556666777766666655
Q ss_pred cccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhh-hhc
Q 000846 472 GYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTI-RTA 548 (1255)
Q Consensus 472 g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~-~~~ 548 (1255)
.+||||+||||.|||||..+|+||++|||+|||||--+..+|+.|.++.+ +||+|+|||++++. +..
T Consensus 163 ----------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 163 ----------NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred ----------ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 58999999999999999999999999999999999999999999988754 79999999999986 679
Q ss_pred CEEEEEeCCEEEEecChhHHhccCCCChhHHHH
Q 000846 549 NLIMVLKAGKVVESGSHNELMNRGEGGEYYQMV 581 (1255)
Q Consensus 549 d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 581 (1255)
|||..|++|+|+..|+|+|++.++.+.+-..++
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~Fv 265 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVRDFV 265 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHHHHH
Confidence 999999999999999999999876554444444
No 259
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-41 Score=380.23 Aligned_cols=220 Identities=32% Similarity=0.532 Sum_probs=188.3
Q ss_pred cccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCC--C
Q 000846 1006 RGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRN--Y 1078 (1255)
Q Consensus 1006 ~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i 1078 (1255)
.+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999963 3699999999999999999999999999999999999984 89999999999875 3
Q ss_pred CHHHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChH
Q 000846 1079 NLKQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGG 1151 (1255)
Q Consensus 1079 ~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgG 1151 (1255)
+...+|++++|+||++.+|.+|++||+.++.. .. . ++++.++++..++.+.+. +..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 45678999999999999999999999976521 11 1 233455555555543322 2345667889999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHH
Q 000846 1152 QKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHN 1230 (1255)
Q Consensus 1152 QkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~ 1230 (1255)
||||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998778999999999999864 9999999999999999999
Q ss_pred HHHhh
Q 000846 1231 ELVAL 1235 (1255)
Q Consensus 1231 eLl~~ 1235 (1255)
++.+.
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 99764
No 260
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=394.35 Aligned_cols=209 Identities=35% Similarity=0.542 Sum_probs=176.5
Q ss_pred ccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHH----hcceEEEccCCCCCc-c
Q 000846 1025 MILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQL----RSHIALVSQEPTLFA-G 1099 (1255)
Q Consensus 1025 ~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l----R~~i~~V~Qdp~LF~-g 1099 (1255)
.+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+...+ |++|+||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998876554 468999999999996 5
Q ss_pred cHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEec
Q 000846 1100 TIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDE 1173 (1255)
Q Consensus 1100 TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDE 1173 (1255)
|++||+.++.. ..+ ++++.++++..++.++. .....+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~-----------~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYA-----------HSYPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh-----------hcCcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987531 112 23444555555554433 33446899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhhhcCchh-HHHH
Q 000846 1174 ATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVALSRGGAY-YSLI 1245 (1255)
Q Consensus 1174 aTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y-~~l~ 1245 (1255)
|||+||+.+.+.+++.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.. +...| +.++
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~-~~~~~v~~~~ 265 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN-PANDYVRTFF 265 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC-cccHHHHHHH
Confidence 999999999999999999874 48999999999999854 999999999999999999999875 33333 3444
No 261
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-41 Score=375.34 Aligned_cols=216 Identities=29% Similarity=0.505 Sum_probs=182.7
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++++
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i 76 (239)
T cd03296 2 SIEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNV 76 (239)
T ss_pred EEEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccce
Confidence 3789999999974 459999999999999999999999999999999999999999999999999876543 25689
Q ss_pred EEeccCCccCc-ccHHHHhccCCCCC------CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 424 GLVNQEPVLFA-TSITENILFGKDGA------SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 424 ~~v~Q~~~l~~-~ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
+|++|+|.+|. .|++||+.++.... ...+.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 77 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~ 149 (239)
T cd03296 77 GFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALAR 149 (239)
T ss_pred EEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHH
Confidence 99999999986 59999998764211 111111 1223444444 5555566677899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
||+.+|++|||||||++||+++++.+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 150 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 150 ALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 99999999999999999999999999999998743 789999999999875 5999999999999999999998754
No 262
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-41 Score=380.94 Aligned_cols=219 Identities=29% Similarity=0.517 Sum_probs=185.5
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCC--CC
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRN--YN 1079 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1079 (1255)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 45999999999963 469999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhcceEEEccCCCCCcccHHHHHhcCCC-----CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHH
Q 000846 1080 LKQLRSHIALVSQEPTLFAGTIRENIAYGKA-----DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQ 1154 (1255)
Q Consensus 1080 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~-----~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQ 1154 (1255)
...+|++++||||++.+|..|++||+.++.. ...++++.++++..++...+. ........+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVK-------DQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhH-------HHHhCCcccCCHHHHH
Confidence 5678899999999999998999999976421 112334555555555432221 1234556789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEE-EEeCCEEEEecCHHHH
Q 000846 1155 RIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIA-VIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1155 rlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~-Vl~~G~ive~G~~~eL 1232 (1255)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 99975 5699999999999999
Q ss_pred Hhh
Q 000846 1233 VAL 1235 (1255)
Q Consensus 1233 l~~ 1235 (1255)
.+.
T Consensus 268 ~~~ 270 (285)
T PRK14254 268 FEN 270 (285)
T ss_pred HhC
Confidence 764
No 263
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-41 Score=374.47 Aligned_cols=212 Identities=31% Similarity=0.499 Sum_probs=180.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH-Hhcce
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ-LRSHI 1087 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 1087 (1255)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 578999999963 36999999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCC--CHHHH-HHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHc
Q 000846 1088 ALVSQEPTLFAG-TIRENIAYGKADA--RESEI-KKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAIL 1163 (1255)
Q Consensus 1088 ~~V~Qdp~LF~g-TIreNl~~g~~~~--~~~ei-~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALl 1163 (1255)
+|+||++.+|.. |++||+.++.... ..++. .++++..+ +++........+||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999986 9999998653211 11111 12222111 2233344556789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1164 KNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1164 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999999998764 7899999999999985 9999999999999999999983
No 264
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.7e-41 Score=386.26 Aligned_cols=217 Identities=28% Similarity=0.485 Sum_probs=182.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++|
T Consensus 7 ~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 5999999999963 46999999999999999999999999999999999999999999999999997754 4578999
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILK 1164 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr 1164 (1255)
|||||++.+|. .|++||+.+... ..+..+..+.+ ..+.+++ .+++..++.+ .+||||||||++|||||+.
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~--~~~l~~~-~l~~~~~~~~----~~LS~G~~qrl~la~aL~~ 155 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALV--PPLLEFA-KLENKADAKV----GELSGGMKRRLTLARALVN 155 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHH--HHHHHHc-CCchHhcCch----hhCCHHHHHHHHHHHHHhC
Confidence 99999999886 699999975321 12222222211 1111111 2333455554 4799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1165 NPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1165 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
+|++|+|||||++||+.+.+.+++.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 156 ~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 156 DPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 999999999999999999999999999975 47999999999999965 999999999999999999999754
No 265
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=372.86 Aligned_cols=216 Identities=32% Similarity=0.557 Sum_probs=185.8
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCCCCChHHHHHHHHHHHhccCC
Q 000846 424 GLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGFQMSGGQKQRIAIARALIRDP 502 (1255)
Q Consensus 424 ~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqrqri~lARal~~~~ 502 (1255)
+|++|++.+|+.|++||+.++.......+ ..+.+.++.+ |++ ........+||||||||++||||++++|
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~-------~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKN-------VDVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHH-------HHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999998999999987532111110 1122334443 443 2445667899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 503 KILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 503 ~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999874 3899999999999986 5999999999999999999998764
No 266
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.5e-41 Score=357.65 Aligned_cols=178 Identities=38% Similarity=0.684 Sum_probs=166.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|+.+ +.++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23699999999999999999999999999999999999999999999999998776 667889999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 000846 1089 LVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSI 1168 (1255)
Q Consensus 1089 ~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~I 1168 (1255)
|+||+|.+|+.|++||+ ..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 457999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000846 1169 LLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1169 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G 1227 (1255)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999999865
No 267
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-42 Score=361.76 Aligned_cols=217 Identities=31% Similarity=0.475 Sum_probs=185.2
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCe---ecCCCCHHHHh
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQ---DIRNYNLKQLR 1084 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~---di~~i~~~~lR 1084 (1255)
.|+++|++..|+. .++++|||++|+.||.+|+.||||||||||++++.|+..|++|+|.+||. |.++.+. -.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~--~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAV--RD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccch--hh
Confidence 3788999999963 46899999999999999999999999999999999999999999999999 7777443 34
Q ss_pred cceEEEccCCCCCc-ccHHHHHhcCCC----CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHH
Q 000846 1085 SHIALVSQEPTLFA-GTIRENIAYGKA----DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQR 1155 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~-gTIreNl~~g~~----~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQr 1155 (1255)
++||+|+||..||. .||++||+||.. ..+ ...+.+-++.+++..+-+. ...+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~r-----------yP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADR-----------YPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhc-----------CchhcChHHHHH
Confidence 78999999999886 699999999963 112 2344444555555444332 357899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHH
Q 000846 1156 IALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1156 lalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
+||||||...|++|+||||.++||..-.+.+++-|++... +.|+++|||+.+.+. -||||+||++|+|...|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999998753 899999999999875 5999999999999999999999
Q ss_pred HhhhcCchh
Q 000846 1233 VALSRGGAY 1241 (1255)
Q Consensus 1233 l~~~~~g~y 1241 (1255)
... +++.|
T Consensus 226 ~~~-P~s~f 233 (345)
T COG1118 226 YDH-PASRF 233 (345)
T ss_pred hcC-CCccc
Confidence 875 56554
No 268
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-41 Score=370.08 Aligned_cols=209 Identities=27% Similarity=0.456 Sum_probs=178.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++ .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 4699999999999999999999999999999999999999999999999998763 356788999
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
|+||++.+|.. |++||+.++.. ..+ ++++.++++..++.++.. ....+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAAD-----------RLVKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhCCHHHHHHHHHHHH
Confidence 99999998875 99999976411 111 234455555555544332 2345799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
++.+|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999999998753 7899999999999865 999999999999999998875
No 269
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-41 Score=382.12 Aligned_cols=220 Identities=32% Similarity=0.580 Sum_probs=187.5
Q ss_pred eEEEEeEEEEcCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCC----CHH
Q 000846 344 EIEFRDVYFCYPSRP--DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRL----HLK 417 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~----~~~ 417 (1255)
.|+++||+|+|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 388999999996422 24699999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhcccEEeccCC--ccCcccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccc-hhcCCCCCCChHHHHHH
Q 000846 418 WLRSQMGLVNQEP--VLFATSITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYET-QVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 418 ~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~~~~g~~LSgGqrqri 492 (1255)
.+|++||||+|+| .+|..|++|||.++... .+.++..+ .+.+.+..+ |+++ .....+.+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv 154 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKN-----YAHRLLMDL--GFSRDVMSQSPFQMSGGQMRKI 154 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccCCHHHHHHH
Confidence 6888999999998 58888999999986321 22222222 123455555 7763 45677899999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHh
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELM 569 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~ 569 (1255)
+|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999874 4899999999999885 69999999999999999999986
Q ss_pred c
Q 000846 570 N 570 (1255)
Q Consensus 570 ~ 570 (1255)
+
T Consensus 235 ~ 235 (286)
T PRK13646 235 K 235 (286)
T ss_pred h
Confidence 5
No 270
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-41 Score=377.61 Aligned_cols=218 Identities=33% Similarity=0.544 Sum_probs=184.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc---cCC--CCceEEECCeecCCC--CH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERF---YDP--LKGSVFMDEQDIRNY--NL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl---~~p--~~G~I~idG~di~~i--~~ 1080 (1255)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4899999999963 4599999999999999999999999999999999997 454 589999999998754 34
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-----CHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-----RESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-----~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|++++||||+|.+|..|++||+.++.. .. .++++.++++..++.+++ ++.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEV-------KDKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcch-------hhhhhCCcccCCHHHH
Confidence 677889999999999999999999976421 11 122344444444443222 2334566778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999854 999999999999999999999
Q ss_pred Hhh
Q 000846 1233 VAL 1235 (1255)
Q Consensus 1233 l~~ 1235 (1255)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14245 233 FTN 235 (250)
T ss_pred hcC
Confidence 864
No 271
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-41 Score=379.86 Aligned_cols=213 Identities=31% Similarity=0.529 Sum_probs=183.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCC-HHHHhcce
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYN-LKQLRSHI 1087 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~lR~~i 1087 (1255)
|+++||+++|++ ++++|+||||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 245999999999999999999999999999999999999999999999999998765 46778899
Q ss_pred EEEccCCC--CCcccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHH
Q 000846 1088 ALVSQEPT--LFAGTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALA 1159 (1255)
Q Consensus 1088 ~~V~Qdp~--LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalA 1159 (1255)
+|+||+|. +++.|++|||.++.. ..+. +++.++++..++.+ ........||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEK-----------YRHRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHH-----------HhcCCcccCCHHHHHHHHHH
Confidence 99999985 677899999987532 1222 23334444444433 33444578999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHh
Q 000846 1160 RAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1160 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||+.+|+||||||||++||+.+...+.+.|++.. +|+|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999875 4899999999999998899999999999999999999865
No 272
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-41 Score=380.00 Aligned_cols=213 Identities=30% Similarity=0.476 Sum_probs=185.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 4899999999963 3699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCC----------CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKA----------DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~----------~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
+|+||++.++. .|++||+.++.. ...++++.++++..++.++... ...+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHR-----------LVDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCCHHHHHHH
Confidence 99999987765 499999987531 0112345566666665444322 2357999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHH
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
+|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999875 3799999999999985 59999999999999999999986
Q ss_pred h
Q 000846 1234 A 1234 (1255)
Q Consensus 1234 ~ 1234 (1255)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 5
No 273
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-41 Score=379.61 Aligned_cols=212 Identities=34% Similarity=0.585 Sum_probs=182.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|+. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..++++++
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 23599999999999999999999999999999999999999999999999999888878888899
Q ss_pred EEeccCC--ccCcccHHHHhccCCC--CCCH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 424 GLVNQEP--VLFATSITENILFGKD--GASM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 424 ~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
+||+|+| .++..|++||+.++.. .... +++.++++..++.+ .......+||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----------~~~~~~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWD-----------FRDKPPYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHH-----------HhcCChhhCCHHHHHHHHHH
Confidence 9999998 5778899999998632 1122 12333333444433 34444568999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
|||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999999999998874 4899999999999984 6999999999999999998764
No 274
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.7e-41 Score=367.28 Aligned_cols=203 Identities=26% Similarity=0.446 Sum_probs=177.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++||+++|++ .++|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.+||.++... ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999963 4699999999999999999999999999999999999999999999999998764 56788999
Q ss_pred EEccCCCCC-cccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 000846 1089 LVSQEPTLF-AGTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN 1165 (1255)
Q Consensus 1089 ~V~Qdp~LF-~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~ 1165 (1255)
||||++.+| +.|++||+.++.. ..+++++.++++..++.+... .....||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAK-----------KKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHh-----------hhHhhCCHHHHHHHHHHHHHhcC
Confidence 999999887 5799999976531 234556777777777655433 23457999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000846 1166 PSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1166 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1227 (1255)
|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999875 47999999999999865 9999999999999875
No 275
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=9.8e-42 Score=372.26 Aligned_cols=208 Identities=37% Similarity=0.509 Sum_probs=172.4
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH----H
Q 000846 1009 IELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ----L 1083 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~----l 1083 (1255)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996421 146999999999999999999999999999999999999999999999999998876432 4
Q ss_pred hcceEEEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1084 RSHIALVSQEPTLFAG-TIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1084 R~~i~~V~Qdp~LF~g-TIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
|++++|+||+|.+|.+ |++||+.++.. ....++. ...+.+++..+ |++........+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 6789999999999976 99999987532 1111111 11122333333 4444445556789999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQKSDTIAVIKNGRV 1223 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~i 1223 (1255)
||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998764 7999999999999888999999999974
No 276
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-41 Score=377.58 Aligned_cols=221 Identities=32% Similarity=0.545 Sum_probs=189.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccCCCCCcc-cHHHHHhcCCCC----------CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHH
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGKAD----------ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~~~----------~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrla 1157 (1255)
|+||++.+|.+ |++||+.++... ..++++.++++..++.++ .......||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHL-----------ADRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHH-----------HcCCcccCCHHHHHHHH
Confidence 99999998876 999999876311 112234444554454333 23345689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
||||++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++++.|++++++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 9999999999999999999999999999999999875 47999999999999865 999999999999999999998653
Q ss_pred hcCchhHHHHh
Q 000846 1236 SRGGAYYSLIK 1246 (1255)
Q Consensus 1236 ~~~g~y~~l~~ 1246 (1255)
..+.+.+.
T Consensus 229 ---~~~~~~~~ 236 (255)
T PRK11231 229 ---GLLRTVFD 236 (255)
T ss_pred ---HHHHHHhC
Confidence 34555553
No 277
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=4.4e-41 Score=373.96 Aligned_cols=217 Identities=33% Similarity=0.516 Sum_probs=183.7
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCC-----ccEEEECCeecCCC--CHH
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPV-----EGEVLLDGYKIRRL--HLK 417 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~-----~G~i~~~g~~~~~~--~~~ 417 (1255)
|+++||+++|++ .++++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999974 35999999999999999999999999999999999999998 99999999998753 355
Q ss_pred HHhcccEEeccCCccCcccHHHHhccCCCC---CCHHHHHHHHHHhchHHHHhcCCCccc----chhcCCCCCCChHHHH
Q 000846 418 WLRSQMGLVNQEPVLFATSITENILFGKDG---ASMDDVISAAKAANAHDFITKLPDGYE----TQVGQLGFQMSGGQKQ 490 (1255)
Q Consensus 418 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~----t~~~~~g~~LSgGqrq 490 (1255)
..+++++|+||++.+|+.|++||+.++... ...++..+ .+.+.++.+ |+. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKA--ALWDEVKDRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHc--CCCcchhhHhhCCcccCCHHHHH
Confidence 678899999999999999999999875321 11111111 122233333 443 4456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHh
Q 000846 491 RIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELM 569 (1255)
Q Consensus 491 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~ 569 (1255)
|++|||||+.+|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998876789999999999885 59999999999999999999987
Q ss_pred cc
Q 000846 570 NR 571 (1255)
Q Consensus 570 ~~ 571 (1255)
..
T Consensus 232 ~~ 233 (247)
T TIGR00972 232 TN 233 (247)
T ss_pred hC
Confidence 54
No 278
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-41 Score=376.49 Aligned_cols=227 Identities=30% Similarity=0.506 Sum_probs=189.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCCC--CH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRNY--NL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1080 (1255)
-|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 3899999999963 4699999999999999999999999999999999999984 899999999998753 34
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC---CC----CHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA---DA----RESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~---~~----~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|++++|+||+|.+|..|++||+.++.. .. .++++.++++..++.+.+ +........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-------KSELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-------HHHHhCChhhcCHHHH
Confidence 567889999999999999999999986421 11 122344455555543322 1224556778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998754 999999999999999999999
Q ss_pred HhhhcCchhHHHH
Q 000846 1233 VALSRGGAYYSLI 1245 (1255)
Q Consensus 1233 l~~~~~g~y~~l~ 1245 (1255)
.+. +...|.+.+
T Consensus 233 ~~~-~~~~~~~~~ 244 (250)
T PRK14262 233 VER-PKNKLTEEY 244 (250)
T ss_pred HhC-CCChHHHHH
Confidence 764 334455433
No 279
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-41 Score=376.62 Aligned_cols=218 Identities=33% Similarity=0.547 Sum_probs=184.1
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCC--CCH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRR--LHL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 416 (1255)
.|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 5999999999963 359999999999999999999999999999999999974 689999999999864 345
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCC--CC-C----HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKD--GA-S----MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
..+|++++|++|++.+|+.|++||+.++.. .. . .+++.++++..++.+. +.+..+..+.+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDE-------VKDRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchh-------hhHHhhCCcccCCHHHH
Confidence 567889999999999998999999987531 11 1 1223333333333221 12345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999877899999999999985 5999999999999999999998
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
.+.
T Consensus 236 ~~~ 238 (253)
T PRK14242 236 FTR 238 (253)
T ss_pred HcC
Confidence 764
No 280
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-41 Score=374.63 Aligned_cols=204 Identities=31% Similarity=0.490 Sum_probs=176.9
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 4999999999963 46999999999999999999999999999999999999999999999998763 467899
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNP 1166 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p 1166 (1255)
+|+||++.+|. .|++||+.++.....++++.++++..++.++ ......+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADR-----------ANEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 6999999876432224455555555555433 34455789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHH
Q 000846 1167 SILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHN 1230 (1255)
Q Consensus 1167 ~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~ 1230 (1255)
++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999999874 37999999999999854 9999999999999988754
No 281
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-41 Score=375.07 Aligned_cols=219 Identities=30% Similarity=0.454 Sum_probs=183.7
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCC--CC
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRR--LH 415 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 415 (1255)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 36999999999963 3599999999999999999999999999999999999997 48999999998853 34
Q ss_pred HHHHhcccEEeccCCccCcccHHHHhccCCCCC---CH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHH
Q 000846 416 LKWLRSQMGLVNQEPVLFATSITENILFGKDGA---SM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQ 488 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 488 (1255)
...+|++++|++|++.+|+.|++|||.++.... .. +.+.++++..++.+. +.......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNE-------VKDKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchh-------hHHHHhCCcccCCHHH
Confidence 456788999999999999899999998763211 11 223333333333211 1223445678999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhH
Q 000846 489 KQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNE 567 (1255)
Q Consensus 489 rqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~ 567 (1255)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999999877899999999999985 599999999999999999999
Q ss_pred Hhcc
Q 000846 568 LMNR 571 (1255)
Q Consensus 568 l~~~ 571 (1255)
+.++
T Consensus 236 ~~~~ 239 (254)
T PRK14273 236 LFFN 239 (254)
T ss_pred HHhC
Confidence 9764
No 282
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-41 Score=380.67 Aligned_cols=220 Identities=32% Similarity=0.546 Sum_probs=184.6
Q ss_pred eEEEEeEEEEcCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCC----CCHH
Q 000846 344 EIEFRDVYFCYPSRP--DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRR----LHLK 417 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~----~~~~ 417 (1255)
.|+++|++|+|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++.. .+..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 388999999997421 1469999999999999999999999999999999999999999999999999863 2455
Q ss_pred HHhcccEEeccCC--ccCcccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCCCCChHHHHHH
Q 000846 418 WLRSQMGLVNQEP--VLFATSITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 418 ~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqrqri 492 (1255)
..|+.|+||+|+| .+|+.||+|||.|+... .+.++..+ .+.+.++.+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv 154 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ-----KAREMIELV--GLPEELLARSPFELSGGQMRRV 154 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCChhhhhCCcccCCHHHHHHH
Confidence 6788999999998 68888999999886421 22222221 122334444 554 334566789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHh
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELM 569 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~ 569 (1255)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ |.|+|++||+++.+. .||||++|++|++++.|+++++.
T Consensus 155 ~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 234 (290)
T PRK13634 155 AIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIF 234 (290)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999998743 899999999999985 59999999999999999999986
Q ss_pred c
Q 000846 570 N 570 (1255)
Q Consensus 570 ~ 570 (1255)
+
T Consensus 235 ~ 235 (290)
T PRK13634 235 A 235 (290)
T ss_pred c
Confidence 5
No 283
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.9e-41 Score=379.27 Aligned_cols=224 Identities=24% Similarity=0.424 Sum_probs=186.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHH---HHh
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLK---QLR 1084 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 1084 (1255)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999876643 357
Q ss_pred cceEEEccCCCCCcc-cHHHHHhcCCC---CCCHH----HHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1085 SHIALVSQEPTLFAG-TIRENIAYGKA---DARES----EIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~g-TIreNl~~g~~---~~~~~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
++++|+||++.+|.+ |++||+.++.. ..+.+ .+.+.++..+ ++........+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVG-----------LRGAAKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcC-----------ChhhhhCChhhCCHHHHHHH
Confidence 889999999999986 99999976421 11221 2222333333 33223344568999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999866 9999999999999999999998
Q ss_pred hhhcCchhHHHHh
Q 000846 1234 ALSRGGAYYSLIK 1246 (1255)
Q Consensus 1234 ~~~~~g~y~~l~~ 1246 (1255)
+. +...+..++.
T Consensus 233 ~~-~~~~~~~~~~ 244 (269)
T PRK11831 233 AN-PDPRVRQFLD 244 (269)
T ss_pred cC-CcHHHHHHHH
Confidence 64 3344555554
No 284
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-41 Score=375.16 Aligned_cols=221 Identities=35% Similarity=0.562 Sum_probs=184.1
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCC---HHHHhc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLH---LKWLRS 421 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~r~ 421 (1255)
++++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 468999999964 146999999999999999999999999999999999999999999999999998776 456788
Q ss_pred ccEEeccCCccCc-ccHHHHhccCCCCCC--HHHH---HHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 422 QMGLVNQEPVLFA-TSITENILFGKDGAS--MDDV---ISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
.++|++|++.+|. .|++||+.++..... ...+ ........+.+.+..+ |+.......+.+||||||||++||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHH
Confidence 9999999999887 599999987532110 0000 0001111223445554 566566777889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHh
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELM 569 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~ 569 (1255)
|||+.+|++|||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999999874 3899999999999987 59999999999999999998863
No 285
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-41 Score=375.38 Aligned_cols=220 Identities=32% Similarity=0.544 Sum_probs=186.2
Q ss_pred cceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCC--C
Q 000846 342 RGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRR--L 414 (1255)
Q Consensus 342 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~ 414 (1255)
.+.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 457999999999963 359999999999999999999999999999999999986 589999999999853 3
Q ss_pred CHHHHhcccEEeccCCccCcccHHHHhccCCC---CCCHH----HHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChH
Q 000846 415 HLKWLRSQMGLVNQEPVLFATSITENILFGKD---GASMD----DVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGG 487 (1255)
Q Consensus 415 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 487 (1255)
+...+|++++|++|++.+|+.|++||+.++.. ..+.+ ++.++++..++. .++....++...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALW-------NEVKDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCC-------hhhHHHHhcCCCCCCHH
Confidence 45677889999999999999999999987532 11222 222333333221 12234566778899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChh
Q 000846 488 QKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHN 566 (1255)
Q Consensus 488 qrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~ 566 (1255)
||||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999998877889999999999985 59999999999999999999
Q ss_pred HHhcc
Q 000846 567 ELMNR 571 (1255)
Q Consensus 567 ~l~~~ 571 (1255)
++...
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 98764
No 286
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.4e-41 Score=373.17 Aligned_cols=221 Identities=24% Similarity=0.404 Sum_probs=185.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH-Hhcce
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ-LRSHI 1087 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 1087 (1255)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 36999999999999999999999999999999999999999999999999998877654 45679
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCCCH--HH---HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFAG-TIRENIAYGKADARE--SE---IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1088 ~~V~Qdp~LF~g-TIreNl~~g~~~~~~--~e---i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
+|+||++.+|.+ |++||+.++...... .. .........+.+++..+ |++.........||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999986 999999875321000 00 00001112233444433 45555556677899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
++++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.+ ||+|++|++|++++.|++++++.
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998778999999999999975 99999999999999999999864
No 287
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-41 Score=374.40 Aligned_cols=218 Identities=32% Similarity=0.561 Sum_probs=185.8
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
++++||+++|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999741 45999999999999999999999999999999999999999999999999998877777788999
Q ss_pred EeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccc--hhcCCCCCCChHHHHHHHHHHHhc
Q 000846 425 LVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYET--QVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 425 ~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t--~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
|++|+|.+|. .|++||+.++.. ....++. ...+.+.++.+ |+.. ...+.+.+||||||||++||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999986 599999987531 1111111 12233455555 5553 566778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
++|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999999998743 899999999999875 5999999999999999999988654
No 288
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-41 Score=385.95 Aligned_cols=226 Identities=29% Similarity=0.461 Sum_probs=186.5
Q ss_pred cEEEEEEEEECCCCC-------CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCH
Q 000846 1008 RIELKNVFFAYPTRP-------DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~-------~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~ 1080 (1255)
-|+++|++++|+.+. ..++|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999997321 2469999999999999999999999999999999999999999999999999988875
Q ss_pred H---HHhcceEEEccCCC--CCc-ccHHHHHhcCC---CCCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCC
Q 000846 1081 K---QLRSHIALVSQEPT--LFA-GTIRENIAYGK---ADARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQ 1147 (1255)
Q Consensus 1081 ~---~lR~~i~~V~Qdp~--LF~-gTIreNl~~g~---~~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~ 1147 (1255)
. .+|++|+||||+|. |+. .|+.+|+..+. ...+. +++.++++.+++. +..++. ...+
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~------~~~~~~----~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLR------PEHYDR----YPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCC------hHHhcC----CCcc
Confidence 3 56889999999994 555 49999985321 11122 2334444444432 123333 3567
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 000846 1148 LSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVV 1224 (1255)
Q Consensus 1148 LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~iv 1224 (1255)
||||||||++|||||+.+|+|||+||||++||..+.+.|.+.|+++.+ ++|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 8999999999999975 9999999999999
Q ss_pred EecCHHHHHhhhcCchhHHH
Q 000846 1225 EQGSHNELVALSRGGAYYSL 1244 (1255)
Q Consensus 1225 e~G~~~eLl~~~~~g~y~~l 1244 (1255)
|.|+++++++. +...|.+.
T Consensus 235 e~g~~~~~~~~-p~hpyt~~ 253 (327)
T PRK11308 235 EKGTKEQIFNN-PRHPYTQA 253 (327)
T ss_pred EECCHHHHhcC-CCCHHHHH
Confidence 99999999975 45556653
No 289
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-41 Score=376.59 Aligned_cols=218 Identities=30% Similarity=0.521 Sum_probs=184.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~ 1080 (1255)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 4999999999963 359999999999999999999999999999999999997 699999999999853 355
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--CCCHH-----HHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--DARES-----EIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~~~~-----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|++++|+||+|.+|..|++||+.++.. ..+++ .+.++++..++. +++.......+.+||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIW-------DELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc-------chHHHHHhcCcccCCHHHH
Confidence 678899999999999999999999986421 12221 122233322221 1233334556778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred Hhh
Q 000846 1233 VAL 1235 (1255)
Q Consensus 1233 l~~ 1235 (1255)
.+.
T Consensus 254 ~~~ 256 (271)
T PRK14238 254 FSN 256 (271)
T ss_pred HcC
Confidence 764
No 290
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2e-41 Score=368.37 Aligned_cols=203 Identities=32% Similarity=0.570 Sum_probs=172.7
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 578999999963 3699999999999999999999999999999999999999999999999999766543 57899
Q ss_pred EEccCCCCCc-ccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFA-GTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~-gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
|+||++.+|. .|++||+.++.. ..+. +++.++++..++.++ ......+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHL-----------LDRKPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------HhCChhhCCHHHHHHHHHHHH
Confidence 9999999885 699999986521 1122 233344444444333 334456899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1227 (1255)
++++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999875 37999999999999876 9999999999999876
No 291
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.8e-41 Score=369.48 Aligned_cols=209 Identities=32% Similarity=0.509 Sum_probs=172.8
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH---Hh
Q 000846 1009 IELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ---LR 1084 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR 1084 (1255)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 246999999999999999999999999999999999999999999999999998877654 34
Q ss_pred -cceEEEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1085 -SHIALVSQEPTLFA-GTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1085 -~~i~~V~Qdp~LF~-gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
++|+||||+|.+|. .|++||+.++.. ..+.++..+ .+.+++..+ |++.........||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKE-----RAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 68999999999985 699999976421 111111111 112233322 4444444556789999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEE
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQKSDTIAVIKNGRVV 1224 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~iv 1224 (1255)
||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+..||+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999875 378999999999999889999999999986
No 292
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.8e-41 Score=369.96 Aligned_cols=217 Identities=30% Similarity=0.474 Sum_probs=181.2
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH-Hhccc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW-LRSQM 423 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 423 (1255)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 478999999963 35999999999999999999999999999999999999999999999999998777654 36789
Q ss_pred EEeccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCC
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDP 502 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~ 502 (1255)
+|++|++.+|.. |++||+.++.......+..+ .+.+.++.++ +++........+||||||||++||||++.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKA-----RLERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHH-----HHHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 99999987643221111111 1122223221 2344455667899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 503 KILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 503 ~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
++|||||||++||+.++..+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999998875 5899999999999875 499999999999999999888753
No 293
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.6e-41 Score=392.13 Aligned_cols=214 Identities=27% Similarity=0.447 Sum_probs=186.6
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|+++|.++..++...++++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999973 4699999999999999999999999999999999999999999999999999998888899999
Q ss_pred EEeccCCcc-CcccHHHHhccCCCCC-------C---HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHH
Q 000846 424 GLVNQEPVL-FATSITENILFGKDGA-------S---MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 424 ~~v~Q~~~l-~~~ti~~ni~~~~~~~-------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri 492 (1255)
|||+|++.+ ++.|++||+.++.... . .+.+.++++.. |+.........+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~v-----------gl~~~~~~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERT-----------GVAQFADRPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHH
Confidence 999999987 5679999998875211 1 12233344444 444444555679999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+|||||+++|++|||||||++||+.++..+.+.|+++. +|+|+|++||+++.+. .|||+++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999885 4899999999999985 599999999999999999999876
Q ss_pred c
Q 000846 571 R 571 (1255)
Q Consensus 571 ~ 571 (1255)
.
T Consensus 229 ~ 229 (402)
T PRK09536 229 A 229 (402)
T ss_pred c
Confidence 3
No 294
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-41 Score=375.07 Aligned_cols=227 Identities=26% Similarity=0.470 Sum_probs=189.8
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCCC--CH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRNY--NL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1080 (1255)
.|+++||+++|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 4699999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
...|+.++|+||+|.+|+.|++||+.++.. .. . ++.+.++++..++.+ ++.+..+..+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWD-------EVKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCch-------hhHHHhhcChhhCCHHHH
Confidence 677889999999999999999999987532 11 1 123334444443322 223345666788999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++||||++.+|+++||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999964 999999999999999999999
Q ss_pred HhhhcCchhHHHH
Q 000846 1233 VALSRGGAYYSLI 1245 (1255)
Q Consensus 1233 l~~~~~g~y~~l~ 1245 (1255)
.+. +...+.+.+
T Consensus 236 ~~~-~~~~~~~~~ 247 (253)
T PRK14261 236 FEN-PHEELTENY 247 (253)
T ss_pred HhC-CCcHHHHHH
Confidence 764 344455544
No 295
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-41 Score=379.49 Aligned_cols=219 Identities=32% Similarity=0.531 Sum_probs=183.1
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCC----CHHH
Q 000846 1009 IELKNVFFAYPTRP--DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNY----NLKQ 1082 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~--~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~ 1082 (1255)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 13699999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcceEEEccCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccc-cccCCCCCCCChHHHHHHH
Q 000846 1083 LRSHIALVSQEP--TLFAGTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYD-TYCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1083 lR~~i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgGQkQrla 1157 (1255)
+|++|+|+||+| .+|+.|++||+.++.. ..+.++..+. +.++++.+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 889999999998 6888999999986421 1233333221 12223222 343 2234556789999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||||+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||++++|++|++++.|+++++++
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999875 47899999999999865 99999999999999999999865
No 296
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.9e-41 Score=369.34 Aligned_cols=203 Identities=33% Similarity=0.579 Sum_probs=170.8
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH---HHhc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK---WLRS 421 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~r~ 421 (1255)
|+++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999632 23599999999999999999999999999999999999999999999999998766533 4678
Q ss_pred ccEEeccCCccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHH
Q 000846 422 QMGLVNQEPVLFAT-SITENILFGKD--GAS----MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAI 494 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~l 494 (1255)
+++|++|+|.+|.. |++||+.++.. ... .+++.++ ++.+ |+.........+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~---------l~~~--~l~~~~~~~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAA---------LEKV--GLEGKAHALPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHH---------HHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 99999999998875 99999987521 111 1223333 3333 44444455557999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEE
Q 000846 495 ARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKV 559 (1255)
Q Consensus 495 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i 559 (1255)
||||+.+|++|||||||++||+++++.+.+.|+++. +|+|+|+|||+++.+. .||+|++|++|++
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999998874 4899999999999986 4999999999974
No 297
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=391.85 Aligned_cols=217 Identities=33% Similarity=0.550 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+. .|++|
T Consensus 19 ~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 19 LLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred eEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 5999999999963 369999999999999999999999999999999999999999999999999987664 57899
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCC--CCCHH----HHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFAG-TIRENIAYGKA--DARES----EIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1088 ~~V~Qdp~LF~g-TIreNl~~g~~--~~~~~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
+||+|++.+|.. |++|||.|+.. ..+.. ++.+.++..++.++ ......+||||||||+||||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~-----------~~~~~~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEF-----------AKRKPHQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHHH
Confidence 999999999975 99999998742 12222 33344444444333 33445689999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHhhhc
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVALSR 1237 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~~~~ 1237 (1255)
||+++|+|||||||||+||+.+...+.+.|++.. .+.|+|+|||+++.+. -||+|+||++|++++.|+++++..+ +
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~-p 241 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH-P 241 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC-C
Confidence 9999999999999999999999999998888764 3789999999999875 5999999999999999999999875 4
Q ss_pred Cchh
Q 000846 1238 GGAY 1241 (1255)
Q Consensus 1238 ~g~y 1241 (1255)
...|
T Consensus 242 ~~~~ 245 (377)
T PRK11607 242 TTRY 245 (377)
T ss_pred ccHH
Confidence 5444
No 298
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-41 Score=380.64 Aligned_cols=220 Identities=26% Similarity=0.504 Sum_probs=183.8
Q ss_pred eEEEEeEEEEcCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCC--------
Q 000846 344 EIEFRDVYFCYPSRP--DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRR-------- 413 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~-------- 413 (1255)
.|+++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999997432 1359999999999999999999999999999999999999999999999887632
Q ss_pred ----------------CCHHHHhcccEEeccCC--ccCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcc
Q 000846 414 ----------------LHLKWLRSQMGLVNQEP--VLFATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGY 473 (1255)
Q Consensus 414 ----------------~~~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~ 473 (1255)
.+...++++||||+|+| .+|..||+|||.|+.. ....++..+ .+.+.+..+ |+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL 154 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKK-----RAAKYIELV--GL 154 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHc--CC
Confidence 13456788999999986 6788899999998743 122222221 122334444 55
Q ss_pred c-chhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhh-hhcCE
Q 000846 474 E-TQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTI-RTANL 550 (1255)
Q Consensus 474 ~-t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~-~~~d~ 550 (1255)
+ ........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+ ..|||
T Consensus 155 ~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adr 234 (305)
T PRK13651 155 DESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKR 234 (305)
T ss_pred ChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCE
Confidence 4 34667778999999999999999999999999999999999999999999998874 489999999999987 56999
Q ss_pred EEEEeCCEEEEecChhHHhc
Q 000846 551 IMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 551 i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|++|++|++++.|+++++.+
T Consensus 235 v~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 235 TIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred EEEEECCEEEEECCHHHHhc
Confidence 99999999999999999875
No 299
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-41 Score=374.26 Aligned_cols=218 Identities=31% Similarity=0.501 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCCC--CH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRNY--NL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1080 (1255)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 4899999999963 4699999999999999999999999999999999999975 799999999998653 34
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|++++|+||++.+|..|++||+.++.. .. + .+++.++++.+++.+.+. .........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVK-------DDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHH
Confidence 567899999999999999999999986521 11 1 123444555555432222 223445678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999999865 999999999999999999999
Q ss_pred Hhh
Q 000846 1233 VAL 1235 (1255)
Q Consensus 1233 l~~ 1235 (1255)
...
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 764
No 300
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.4e-41 Score=373.57 Aligned_cols=220 Identities=32% Similarity=0.553 Sum_probs=183.1
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH---HHHhc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL---KWLRS 421 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~r~ 421 (1255)
|+++||+++|+. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 2459999999999999999999999999999999999999999999999999877653 34678
Q ss_pred ccEEeccCCccCc-ccHHHHhccCCCCCC--HHHH---HHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 422 QMGLVNQEPVLFA-TSITENILFGKDGAS--MDDV---ISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
+++|++|++.+|. .|++||+.++..... .... ........+.+.++.+ |++......+.+||||||||++||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHH
Confidence 8999999999887 499999987642110 0000 0000112233445555 666666777889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
|||+.+|++|||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 99999999999999999999999999999999874 3799999999999985 5999999999999999999886
No 301
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-41 Score=374.97 Aligned_cols=218 Identities=29% Similarity=0.479 Sum_probs=187.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecC--CCCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIR--NYNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~--~i~~ 1080 (1255)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++. ..+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 369999999999999999999999999999999999986 47999999999985 3455
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCCC--C---CHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKAD--A---RESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQR 1155 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~--~---~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQr 1155 (1255)
..+|++|+|+||++.+|+.|++||+.++... . .++++.++++.+++.+++.. .....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 6788999999999999989999999875321 1 12344455666666544432 2345677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe---------CCEEEE
Q 000846 1156 IALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIK---------NGRVVE 1225 (1255)
Q Consensus 1156 lalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~---------~G~ive 1225 (1255)
++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999998855 89999998 899999
Q ss_pred ecCHHHHHhh
Q 000846 1226 QGSHNELVAL 1235 (1255)
Q Consensus 1226 ~G~~~eLl~~ 1235 (1255)
.|+++++.+.
T Consensus 240 ~~~~~~~~~~ 249 (264)
T PRK14243 240 FDRTEKIFNS 249 (264)
T ss_pred eCCHHHHHhC
Confidence 9999999864
No 302
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-41 Score=376.06 Aligned_cols=219 Identities=33% Similarity=0.510 Sum_probs=186.5
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCC--CC
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRN--YN 1079 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~ 1079 (1255)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 35999999999963 3599999999999999999999999999999999999985 48999999999864 44
Q ss_pred HHHHhcceEEEccCCCCCcccHHHHHhcCCC------CCC-HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHH
Q 000846 1080 LKQLRSHIALVSQEPTLFAGTIRENIAYGKA------DAR-ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1080 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~------~~~-~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1152 (1255)
...+|++|+|+||+|.+|+.|++||+.++.. +.. ++.+.++++.+++.+++.. .....+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 5678899999999999999999999976421 111 2234455666665443321 2344567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe-----CCEEEEe
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIK-----NGRVVEQ 1226 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~-----~G~ive~ 1226 (1255)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.+ ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998778999999999999865 99999997 5999999
Q ss_pred cCHHHHHhh
Q 000846 1227 GSHNELVAL 1235 (1255)
Q Consensus 1227 G~~~eLl~~ 1235 (1255)
|+++++.+.
T Consensus 236 ~~~~~~~~~ 244 (259)
T PRK14260 236 GVTTQIFSN 244 (259)
T ss_pred CCHHHHhcC
Confidence 999999764
No 303
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-41 Score=367.44 Aligned_cols=201 Identities=37% Similarity=0.634 Sum_probs=171.1
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEE
Q 000846 1010 ELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIAL 1089 (1255)
Q Consensus 1010 ~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1089 (1255)
+++|++++|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++|+|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 468999999642 2469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCC--CCCcccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1090 VSQEP--TLFAGTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1090 V~Qdp--~LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
+||+| .++..|++||+.++.. ..+. +++.+.++..++ +........+||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGL-----------EGLRDRSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCc-----------HhhhcCCcccCCHHHHHHHHHHHH
Confidence 99998 3678899999976532 1122 223333333333 333344557899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGR 1222 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ 1222 (1255)
|+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999875 47999999999999987 99999999985
No 304
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-41 Score=375.86 Aligned_cols=218 Identities=28% Similarity=0.471 Sum_probs=185.9
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCCCC-HH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRNYN-LK 1081 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~-~~ 1081 (1255)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999963 4699999999999999999999999999999999999986 6999999999988763 45
Q ss_pred HHhcceEEEccCCCCCcccHHHHHhcCCC---CCCHHHHHH----HHHHhcHHHHHHccccccccccCCCCCCCChHHHH
Q 000846 1082 QLRSHIALVSQEPTLFAGTIRENIAYGKA---DARESEIKK----AAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQ 1154 (1255)
Q Consensus 1082 ~lR~~i~~V~Qdp~LF~gTIreNl~~g~~---~~~~~ei~~----al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQ 1154 (1255)
.+|++++|+||+|.+|..|+++|+.++.. ..++++..+ .++..++ +..+++.+...+.+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGL-------WDAVKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCC-------CchhhhHhhCCcccCCHHHHH
Confidence 67899999999999999999999987531 124444322 2222222 222223445667889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1155 RIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1155 rlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777899999999999865 9999999999999999999998
Q ss_pred hh
Q 000846 1234 AL 1235 (1255)
Q Consensus 1234 ~~ 1235 (1255)
+.
T Consensus 251 ~~ 252 (276)
T PRK14271 251 SS 252 (276)
T ss_pred hC
Confidence 64
No 305
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-41 Score=371.50 Aligned_cols=219 Identities=32% Similarity=0.558 Sum_probs=184.5
Q ss_pred EEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH---HHh
Q 000846 345 IEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK---WLR 420 (1255)
Q Consensus 345 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~r 420 (1255)
|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999997431 12699999999999999999999999999999999999999999999999998876543 347
Q ss_pred cccEEeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHH
Q 000846 421 SQMGLVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARA 497 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARa 497 (1255)
+.++|++|++.+|. .|++||+.++.. .....+. ...+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~a 154 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEI-----EERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARA 154 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 88999999999997 599999987532 1111111 11223445555 66666666778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 498 LIRDPKILLLDEATSALDAQSERIVQEAIDKVS-K-GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 498 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
++.+|+++||||||++||+.+++.+.+.|+++. + |+|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 155 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 155 LANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999999874 3 899999999999986 499999999999999999988764
No 306
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.5e-42 Score=342.12 Aligned_cols=223 Identities=27% Similarity=0.478 Sum_probs=194.6
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH-HHhc
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK-WLRS 421 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~-~~r~ 421 (1255)
+.+..+|+.++|.+ ++|+++|||++++||++++.||||+||||.+.++.|+.+|++|+|.+||.|++.++.. .-|-
T Consensus 3 ~~L~a~~l~K~y~k---r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArl 79 (243)
T COG1137 3 STLVAENLAKSYKK---RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARL 79 (243)
T ss_pred cEEEehhhhHhhCC---eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhc
Confidence 35789999999974 4599999999999999999999999999999999999999999999999999999975 4566
Q ss_pred ccEEeccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhcc
Q 000846 422 QMGLVNQEPVLFAT-SITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIR 500 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~ 500 (1255)
.|||+||||.+|.+ ||+|||..-.+ ..+.+...+.+...+++.++.+ ++...-...+..||||||+|+.|||||..
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE-~~~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~ 156 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLE-IREKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAA 156 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHh-hhhcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhc
Confidence 89999999999987 99999986443 1221222233444455666666 77778888999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCch-hhhhcCEEEEEeCCEEEEecChhHHhcc
Q 000846 501 DPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLS-TIRTANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 501 ~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~-~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
+|+.++||||+|++||.+-..|++.++.++ +|..|++.-|+.. ++..|||.+++.+|+|..+|+|+|+.++
T Consensus 157 ~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 157 NPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred CCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 999999999999999999999999999885 4889999999987 5678999999999999999999999875
No 307
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-41 Score=378.76 Aligned_cols=219 Identities=29% Similarity=0.536 Sum_probs=182.5
Q ss_pred EEEEEEEEECCCCC--CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCC----CHHH
Q 000846 1009 IELKNVFFAYPTRP--DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNY----NLKQ 1082 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~--~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~ 1082 (1255)
|+++||+++|++.. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13641 3 IKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLKK 82 (287)
T ss_pred EEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996321 14699999999999999999999999999999999999999999999999998653 3456
Q ss_pred HhcceEEEccCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHcccccccc-ccCCCCCCCChHHHHHHH
Q 000846 1083 LRSHIALVSQEP--TLFAGTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDT-YCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1083 lR~~i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt-~vge~G~~LSgGQkQrla 1157 (1255)
.|+.|+|+||+| .+|..|++||+.++.. ..+.++..+ .+.+++..+ |++. .......+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl~ 155 (287)
T PRK13641 83 LRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKV--GLSEDLISKSPFELSGGQMRRVA 155 (287)
T ss_pred HHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhhCCcccCCHHHHHHHH
Confidence 788999999998 5888899999986531 222222211 122333332 4432 234556789999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||||+.+|++|||||||++||+.+.+.+.+.|++.. ++.|+|++||+++.+. -||+|++|++|++++.|+++++++
T Consensus 156 laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 156 IAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999875 4789999999999985 599999999999999999999875
No 308
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-41 Score=369.90 Aligned_cols=205 Identities=33% Similarity=0.507 Sum_probs=172.8
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1009 IELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
|+++|++++|+... .+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999996311 1469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
+||||+|.+|. .|++||+.++.. ..+ ++++.++++..++.++ ......+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGF-----------ENAYPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCCcccCCHHHHHHHHHHH
Confidence 99999999987 699999976421 111 2334444444444433 33344679999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEe--CCEEEEecCH
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIK--NGRVVEQGSH 1229 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~--~G~ive~G~~ 1229 (1255)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999874 37899999999998754 99999999 7999998764
No 309
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.6e-41 Score=367.81 Aligned_cols=201 Identities=32% Similarity=0.484 Sum_probs=172.7
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHH---HHhc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLK---QLRS 1085 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR~ 1085 (1255)
|+++|++++|++ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999887643 4688
Q ss_pred ceEEEccCCCCCc-ccHHHHHhcCCC------CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHH
Q 000846 1086 HIALVSQEPTLFA-GTIRENIAYGKA------DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIAL 1158 (1255)
Q Consensus 1086 ~i~~V~Qdp~LF~-gTIreNl~~g~~------~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlal 1158 (1255)
+++|+||+|.+|. .|++||+.++.. ...++++.++++..++.++... ...+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADA-----------FPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHHH
Confidence 9999999999886 699999976421 1123455566666665544332 235799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 000846 1159 ARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGR 1222 (1255)
Q Consensus 1159 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ 1222 (1255)
||||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999875 48999999999999976 89999999985
No 310
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-41 Score=380.38 Aligned_cols=222 Identities=30% Similarity=0.471 Sum_probs=182.6
Q ss_pred cccEEEEEEEEECCCCC--CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCC----C-
Q 000846 1006 RGRIELKNVFFAYPTRP--DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRN----Y- 1078 (1255)
Q Consensus 1006 ~g~I~~~~Vsf~Y~~~~--~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----i- 1078 (1255)
.+.|+++|++++|+.++ ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46799999999997432 1359999999999999999999999999999999999999999999999999852 2
Q ss_pred CHHHHhcceEEEccCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccc-cccCCCCCCCChHHH
Q 000846 1079 NLKQLRSHIALVSQEP--TLFAGTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYD-TYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1079 ~~~~lR~~i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgGQk 1153 (1255)
+...+|++|+|+||+| .+|..|++||+.++.. ....++..+.+ .+.+..+ |+. ........+||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~~LS~Gq~ 156 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKV-----PELLKLV--QLPEDYVKRSPFELSGGQK 156 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhHhcCChhhCCHHHH
Confidence 4567888999999998 4778899999987532 12233322211 1222211 221 123455678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHN 1230 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~ 1230 (1255)
||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPF 236 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998753 789999999999875 49999999999999999999
Q ss_pred HHHh
Q 000846 1231 ELVA 1234 (1255)
Q Consensus 1231 eLl~ 1234 (1255)
+++.
T Consensus 237 ~~~~ 240 (289)
T PRK13645 237 EIFS 240 (289)
T ss_pred HHhc
Confidence 8865
No 311
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-41 Score=367.58 Aligned_cols=207 Identities=34% Similarity=0.563 Sum_probs=174.2
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 468999999963 459999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EeccCCccCc-ccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 425 LVNQEPVLFA-TSITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 425 ~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
|++|+|.+|. .|++||+.++... ...++.. ..+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~ 148 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIR-----ARVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALARE 148 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 4999999875321 1111111 1123444444 555556666789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESG 563 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g 563 (1255)
|++|||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+. .||+|++|++|++++.|
T Consensus 149 p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 149 PSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999874 3899999999999875 59999999999998765
No 312
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-41 Score=371.99 Aligned_cols=216 Identities=24% Similarity=0.436 Sum_probs=184.7
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH-Hhcce
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ-LRSHI 1087 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 1087 (1255)
|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 4 l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 4 LTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred EEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 889999999963 46999999999999999999999999999999999999999999999999998877644 57899
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHc
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKA---DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAIL 1163 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~---~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALl 1163 (1255)
+|+||++.+|. .|++||+.++.. ..+.++. ...+.+++..+ |++.........||||||||++||||++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~ 153 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALA 153 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHh
Confidence 99999999887 499999986531 1122211 12334455544 4555556667889999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000846 1164 KNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1164 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
++|++|||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+. .||+|++|++|++++.|++++++.
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 154 ANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 9999999999999999999999999998865 4899999999998775 599999999999999999999975
No 313
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=9e-41 Score=382.76 Aligned_cols=222 Identities=29% Similarity=0.449 Sum_probs=185.5
Q ss_pred eEEEEeEEEEcCCCC----------CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCC
Q 000846 344 EIEFRDVYFCYPSRP----------DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRR 413 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~----------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~ 413 (1255)
-|+++|++++|+.+. ...+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 589999999996321 2469999999999999999999999999999999999999999999999999988
Q ss_pred CCHH---HHhcccEEeccCC--ccCc-ccHHHHhccCCC----CCCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCC
Q 000846 414 LHLK---WLRSQMGLVNQEP--VLFA-TSITENILFGKD----GASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGF 482 (1255)
Q Consensus 414 ~~~~---~~r~~i~~v~Q~~--~l~~-~ti~~ni~~~~~----~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~ 482 (1255)
.+.. .+|++|+||+|+| .+++ .||.|||.++.. ..+.++..+. +.+.++.+ |++ ........
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~v--gl~~~~~~~~p~ 160 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKV--GLLPNLINRYPH 160 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHc--CCChHHhcCCcc
Confidence 7654 3678999999999 4774 599999975321 1232322221 12334433 442 24566778
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEE
Q 000846 483 QMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKV 559 (1255)
Q Consensus 483 ~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i 559 (1255)
+|||||||||+|||||+.+|++||+||||++||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++
T Consensus 161 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~i 240 (331)
T PRK15079 161 EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHA 240 (331)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998753 8999999999999965 999999999999
Q ss_pred EEecChhHHhccC
Q 000846 560 VESGSHNELMNRG 572 (1255)
Q Consensus 560 ~~~g~~~~l~~~~ 572 (1255)
++.|+++++..++
T Consensus 241 ve~g~~~~i~~~~ 253 (331)
T PRK15079 241 VELGTYDEVYHNP 253 (331)
T ss_pred EEEcCHHHHHcCC
Confidence 9999999998753
No 314
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-41 Score=390.59 Aligned_cols=217 Identities=29% Similarity=0.482 Sum_probs=184.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999876543 4679
Q ss_pred EEeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhcc
Q 000846 424 GLVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIR 500 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~ 500 (1255)
+||+|++.+|.. ||+||+.|+.. ....++.. ..+.+.++.+ |++........+||||||||++|||||+.
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~-----~~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~ 150 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEIN-----QRVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVA 150 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999975 99999998643 11222111 1122334444 55555566667999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccC
Q 000846 501 DPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 501 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
+|++||||||||+||+.+++.+.+.|+++.+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++...+
T Consensus 151 ~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p 225 (369)
T PRK11000 151 EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYP 225 (369)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 9999999999999999999999999988743 899999999999875 59999999999999999999997653
No 315
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-41 Score=377.18 Aligned_cols=215 Identities=33% Similarity=0.539 Sum_probs=184.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.++++||+++|+.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999642 24699999999999999999999999999999999999999999999999999888777788899
Q ss_pred EEeccCC--ccCcccHHHHhccCCCC--CCHH----HHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 424 GLVNQEP--VLFATSITENILFGKDG--ASMD----DVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 424 ~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
+|++|+| .+++.||+|||.++... ...+ ++.++++.. |++..+.....+||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQV-----------GMEDFLNREPHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHc-----------CChhhhhCCcccCCHHHHHHHHHH
Confidence 9999998 45667999999876321 1222 233333333 444444555569999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999999998753 799999999999988899999999999999999998865
No 316
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.3e-41 Score=368.61 Aligned_cols=215 Identities=30% Similarity=0.502 Sum_probs=180.0
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++||++.|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 4789999999742 146999999999999999999999999999999999999999999999999986543 56678899
Q ss_pred EeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 425 LVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 425 ~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
|++|++.++. .|++||+.++.. ....++.. ..+.+.++.+ |++........+||||||||++||||++.+
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIK-----EEVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGG 151 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 9999999984 699999986421 11111111 1123334443 444444555679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 152 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 152 PSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 999999999999999999999999998877899999999999986 5999999999999999998875
No 317
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-41 Score=372.85 Aligned_cols=223 Identities=30% Similarity=0.520 Sum_probs=189.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCC--CCHH
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRN--YNLK 1081 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~~ 1081 (1255)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||.++.. .+..
T Consensus 4 l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 4 IEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 789999999963 469999999999999999999999999999999999975 489999999999875 3456
Q ss_pred HHhcceEEEccCCCCCcccHHHHHhcCCC--CC-C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHH
Q 000846 1082 QLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQ 1154 (1255)
Q Consensus 1082 ~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQ 1154 (1255)
.+|++++|+||+|.+|.+|++||+.++.. .. + ++++.++++.+++.+++.. .....+.+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKD-------KLDKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHH-------HHhCCcccCCHHHHH
Confidence 78999999999999999999999986521 11 1 2334555666666554432 134456789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1155 RIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1155 rlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999998876 8999999999999999999997
Q ss_pred hhhcCchhH
Q 000846 1234 ALSRGGAYY 1242 (1255)
Q Consensus 1234 ~~~~~g~y~ 1242 (1255)
.. +.+.|.
T Consensus 234 ~~-~~~~~~ 241 (250)
T PRK14266 234 IN-PKDKRT 241 (250)
T ss_pred hC-CCChHH
Confidence 64 444443
No 318
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-41 Score=375.67 Aligned_cols=216 Identities=31% Similarity=0.491 Sum_probs=185.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCC--CCcccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHH
Q 000846 1088 ALVSQEPT--LFAGTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALA 1159 (1255)
Q Consensus 1088 ~~V~Qdp~--LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalA 1159 (1255)
+|+||+|. ++..|+++|+.++.. .... +++.++++..++.++ ......+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLER-----------ADYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCCcccCCHHHHHHHHHH
Confidence 99999994 456689999987532 1122 233344444443322 2344578999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1160 RAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1160 RALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
||++.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 7899999999999988999999999999999999998753
No 319
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=371.58 Aligned_cols=216 Identities=27% Similarity=0.493 Sum_probs=181.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecC------CCCHHH
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIR------NYNLKQ 1082 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~------~i~~~~ 1082 (1255)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 36999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhcceEEEccCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHH
Q 000846 1083 LRSHIALVSQEPTLFAG-TIRENIAYGKA---DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIAL 1158 (1255)
Q Consensus 1083 lR~~i~~V~Qdp~LF~g-TIreNl~~g~~---~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlal 1158 (1255)
+|++|+|+||+|.+|.+ |++||+.++.. ....++.. ..+.+++..+ |++........+||||||||++|
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~l 152 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAI 152 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 78899999999999975 99999964211 11222211 1223334333 44444555567899999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1159 ARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1159 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||++++|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||++++|++|++++.|+++++.+
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 999999999999999999999999999999999875 48999999999999865 99999999999999999999864
No 320
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.2e-41 Score=388.31 Aligned_cols=208 Identities=30% Similarity=0.498 Sum_probs=175.4
Q ss_pred CccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCe----ecCCCCHHHHh----cceEEEccCCC
Q 000846 1024 QMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQ----DIRNYNLKQLR----SHIALVSQEPT 1095 (1255)
Q Consensus 1024 ~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~----di~~i~~~~lR----~~i~~V~Qdp~ 1095 (1255)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++...+...+| ++|+||||++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999996 67777665543 58999999999
Q ss_pred CCc-ccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 000846 1096 LFA-GTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSI 1168 (1255)
Q Consensus 1096 LF~-gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~I 1168 (1255)
+|. .|++||+.++.. ..+. +...++++..++.++. .....+||||||||++|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~-----------~~~~~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWA-----------DKKPGELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 799999987632 1122 2344555555554432 334457999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHhhhcCchhHH
Q 000846 1169 LLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVALSRGGAYYS 1243 (1255)
Q Consensus 1169 LlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y~~ 1243 (1255)
||||||||+||+.+.+.+++.|.+..+ ++|+|+|||+++.+. .||+|++|++|++++.|++++++.. +.+.|.+
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~-p~~~~~~ 262 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN-PANDYVA 262 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC-cchHHHH
Confidence 999999999999999999999998753 799999999999974 5999999999999999999999875 4444443
No 321
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-41 Score=343.44 Aligned_cols=220 Identities=29% Similarity=0.459 Sum_probs=192.5
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH-HHhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK-WLRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~-~~r~~ 422 (1255)
-++++|++..|+. ..+|++|||++++||+++|+||||+||||++++|+|+.+|.+|+|.++|+|++..+++ ..|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 4789999999974 4699999999999999999999999999999999999999999999999999999875 46778
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
|+||||.-.+|+. ||+||+.+|....+.++. .....++..+-+| -+....+.++.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~----~~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEA----QERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccc----ccccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999987 999999987532222111 1111344455667 577788899999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhh-hhcCEEEEEeCCEEEEecChhHHhcc
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTI-RTANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~-~~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
|++|+|||||.+|-|.-.+.|.+.|+++++ |.||++|.++.... +.+||.+||++|+|+.+|+.+||.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999874 67999999999986 56999999999999999999999874
No 322
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=8.8e-41 Score=374.92 Aligned_cols=230 Identities=26% Similarity=0.410 Sum_probs=189.3
Q ss_pred cEEEEEEEEECCCC------CCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHH
Q 000846 1008 RIELKNVFFAYPTR------PDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLK 1081 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~------~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~ 1081 (1255)
-|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 38999999999631 124699999999999999999999999999999999999999999999999999766666
Q ss_pred HHhcceEEEccCCC--CCc-ccHHHHHhcCCC---CCC----HHHHHHHHHHhcHH-HHHHccccccccccCCCCCCCCh
Q 000846 1082 QLRSHIALVSQEPT--LFA-GTIRENIAYGKA---DAR----ESEIKKAAVLANAH-EFISGMKDGYDTYCGERGVQLSG 1150 (1255)
Q Consensus 1082 ~lR~~i~~V~Qdp~--LF~-gTIreNl~~g~~---~~~----~~ei~~al~~a~l~-~~i~~lp~gldt~vge~G~~LSg 1150 (1255)
..+++++|+||+|. ++. -|+.+|+.++.. ... ++++.++++..++. +. .+ ....+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~----~~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDH-------AS----YYPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHH-------Hh----cCchhcCH
Confidence 66788999999985 444 389999864211 111 23445555555552 22 12 23467999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000846 1151 GQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1151 GQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1227 (1255)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999875 37899999999999986 9999999999999999
Q ss_pred CHHHHHhhhcCchhHHHHhhh
Q 000846 1228 SHNELVALSRGGAYYSLIKPQ 1248 (1255)
Q Consensus 1228 ~~~eLl~~~~~g~y~~l~~~~ 1248 (1255)
+++++.+......+++++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhc
Confidence 999998753345667777643
No 323
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-41 Score=378.06 Aligned_cols=216 Identities=31% Similarity=0.479 Sum_probs=178.2
Q ss_pred EEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHH----hc
Q 000846 346 EFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWL----RS 421 (1255)
Q Consensus 346 ~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----r~ 421 (1255)
.++|+++.|+. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 45678888853 458999999999999999999999999999999999999999999999999987765433 46
Q ss_pred ccEEeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHh
Q 000846 422 QMGLVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARAL 498 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal 498 (1255)
+++|++|++.+|. .|++||+.++.. .....+.. ..+.+.++.+ |++........+||||||||++|||||
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral 175 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAERE-----ERAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARAL 175 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHH
Confidence 8999999999985 599999987521 11111111 1112333333 444444555578999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 499 IRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 499 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
+++|+||||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+. .||++++|++|++++.|+++++.+.
T Consensus 176 ~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 176 AVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999998874 3799999999999875 5999999999999999999999764
No 324
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-41 Score=384.42 Aligned_cols=227 Identities=23% Similarity=0.334 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCCC-CccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC----CCCceEEECCeecCCCCHHHH
Q 000846 1009 IELKNVFFAYPTRPD-QMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD----PLKGSVFMDEQDIRNYNLKQL 1083 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~-~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~----p~~G~I~idG~di~~i~~~~l 1083 (1255)
|+++|++++|+.+.. .++|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 799999999974321 359999999999999999999999999999999999998 489999999999999887665
Q ss_pred hc----ceEEEccCCC--CCc-ccHHHHH----hcCCC---CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCC
Q 000846 1084 RS----HIALVSQEPT--LFA-GTIRENI----AYGKA---DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLS 1149 (1255)
Q Consensus 1084 R~----~i~~V~Qdp~--LF~-gTIreNl----~~g~~---~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1149 (1255)
|+ +|+||||+|. ++. -|+.+|+ ..... ....+++.++++.+++.+.. ........+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPA--------SRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhCCchhCC
Confidence 43 6999999995 443 3665554 32111 11123445555555543211 12345567899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEe
Q 000846 1150 GGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQ 1226 (1255)
Q Consensus 1150 gGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~ 1226 (1255)
||||||++|||||+.+|+|||+||||++||+.+...|.+.|+++.+ +.|+|+|||+++.+. .||||+||.+|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998753 789999999999985 5999999999999999
Q ss_pred cCHHHHHhhhcCchhHHH
Q 000846 1227 GSHNELVALSRGGAYYSL 1244 (1255)
Q Consensus 1227 G~~~eLl~~~~~g~y~~l 1244 (1255)
|+++++++. +...|.+.
T Consensus 236 g~~~~~~~~-p~hpyt~~ 252 (326)
T PRK11022 236 GKAHDIFRA-PRHPYTQA 252 (326)
T ss_pred CCHHHHhhC-CCChHHHH
Confidence 999999975 55566543
No 325
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-41 Score=374.78 Aligned_cols=220 Identities=32% Similarity=0.514 Sum_probs=185.1
Q ss_pred cceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCC--C
Q 000846 342 RGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRR--L 414 (1255)
Q Consensus 342 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~ 414 (1255)
.+.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|+++|+++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999973 3599999999999999999999999999999999999975 89999999999864 3
Q ss_pred CHHHHhcccEEeccCCccCcccHHHHhccCCC--CC--CH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCCh
Q 000846 415 HLKWLRSQMGLVNQEPVLFATSITENILFGKD--GA--SM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSG 486 (1255)
Q Consensus 415 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 486 (1255)
+...+|+.++|++|+|.+|+.|++||+.++.. .. .. +++.++++..++.+.+ .+..+..+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-------KDRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCH
Confidence 45567889999999999998899999987531 10 11 1223333333332211 2345667789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecCh
Q 000846 487 GQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSH 565 (1255)
Q Consensus 487 Gqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~ 565 (1255)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999998877889999999999985 5999999999999999999
Q ss_pred hHHhcc
Q 000846 566 NELMNR 571 (1255)
Q Consensus 566 ~~l~~~ 571 (1255)
+++...
T Consensus 247 ~~~~~~ 252 (267)
T PRK14235 247 EKMFTN 252 (267)
T ss_pred HHHHhC
Confidence 998754
No 326
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=5.7e-41 Score=384.73 Aligned_cols=228 Identities=24% Similarity=0.364 Sum_probs=186.6
Q ss_pred cEEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCeecCCCCHHHH
Q 000846 1008 RIELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPL---KGSVFMDEQDIRNYNLKQL 1083 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~idG~di~~i~~~~l 1083 (1255)
.++++|++++|+.+. ..++|+||||+|++||++||||+||||||||+++|+|+++|+ +|+|.+||.|+..++..++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 489999999996421 246999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cceEEEccCC--CCCc-ccHHHHHhcCC---CCCCHHHH----HHHHHHhcHHHHHHccccccccccCCCCCCCC
Q 000846 1084 R----SHIALVSQEP--TLFA-GTIRENIAYGK---ADARESEI----KKAAVLANAHEFISGMKDGYDTYCGERGVQLS 1149 (1255)
Q Consensus 1084 R----~~i~~V~Qdp--~LF~-gTIreNl~~g~---~~~~~~ei----~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1149 (1255)
| ++|+|||||| .++. .|+.+|+.... ...+.++. .+.++.+ .+|++.+ .++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~v-------gL~~~~~-~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAV-------KMPEARK-RMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-------CCCChHH-HhcCCcccCC
Confidence 3 4799999999 4554 57888774221 11222222 2222222 2343322 2466778999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEe
Q 000846 1150 GGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQ 1226 (1255)
Q Consensus 1150 gGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~ 1226 (1255)
||||||++|||||+.+|+|||+|||||+||+.+...|.+.|+++.+ +.|+|+|||+++.+. .||+|+||.+|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998754 789999999999996 4999999999999999
Q ss_pred cCHHHHHhhhcCchhHHH
Q 000846 1227 GSHNELVALSRGGAYYSL 1244 (1255)
Q Consensus 1227 G~~~eLl~~~~~g~y~~l 1244 (1255)
|+++++++. +...|.+.
T Consensus 244 g~~~~i~~~-p~~pyt~~ 260 (330)
T PRK09473 244 GNARDVFYQ-PSHPYSIG 260 (330)
T ss_pred CCHHHHHhC-CCCHHHHH
Confidence 999999985 56666663
No 327
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.5e-41 Score=366.07 Aligned_cols=202 Identities=32% Similarity=0.480 Sum_probs=171.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCH---HHHhc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNL---KQLRS 1085 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR~ 1085 (1255)
|+++|++++|+++ +++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999642 369999999999999999999999999999999999999999999999999987754 34788
Q ss_pred ceEEEccCCCCCc-ccHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHH
Q 000846 1086 HIALVSQEPTLFA-GTIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIAL 1158 (1255)
Q Consensus 1086 ~i~~V~Qdp~LF~-gTIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlal 1158 (1255)
+++||||+|.+|. .|++||+.++.. ..+ ++++.++++..++.+.. .....+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKH-----------RALPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhcCHHHHHHHHH
Confidence 9999999999987 599999986521 112 22344445554544332 23345799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000846 1159 ARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRV 1223 (1255)
Q Consensus 1159 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~i 1223 (1255)
||||+++|+||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 58999999999999976 899999999974
No 328
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-41 Score=376.93 Aligned_cols=213 Identities=30% Similarity=0.534 Sum_probs=180.7
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecC--CCCHHHHhcc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIR--NYNLKQLRSH 1086 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~--~i~~~~lR~~ 1086 (1255)
|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999963 46999999999999999999999999999999999999999999999999985 3445678899
Q ss_pred eEEEccCCC--CCcccHHHHHhcCCC--CCCHH----HHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHH
Q 000846 1087 IALVSQEPT--LFAGTIRENIAYGKA--DARES----EIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIAL 1158 (1255)
Q Consensus 1087 i~~V~Qdp~--LF~gTIreNl~~g~~--~~~~~----ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlal 1158 (1255)
|+||||+|. +|..|+.+|+.++.. ..+.+ ++.++++..++.++ ......+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHF-----------RHQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhH-----------hcCCchhCCHHHHHHHHH
Confidence 999999985 677899999976421 12222 23344444444333 223456899999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1159 ARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1159 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
||||+.+|+||||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||++++|++|++++.|++++++..
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999855 999999999999999999998753
No 329
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=371.90 Aligned_cols=212 Identities=30% Similarity=0.483 Sum_probs=183.9
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCCC-CcccHHHHHhcCCC-C-C----CHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTL-FAGTIRENIAYGKA-D-A----RESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~L-F~gTIreNl~~g~~-~-~----~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
|+||++.+ +..|++||+.++.. . . .++.+.++++..++.++ .......||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHL-----------AGRDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhH-----------hcCCcccCCHHHHHHHHHHHH
Confidence 99999987 67899999987532 1 1 12234444554444332 333456899999999999999
Q ss_pred Hc------cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHH
Q 000846 1162 IL------KNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1162 Ll------r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
|+ ++|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999875 4789999999999986 5999999999999999999998
Q ss_pred Hh
Q 000846 1233 VA 1234 (1255)
Q Consensus 1233 l~ 1234 (1255)
.+
T Consensus 229 ~~ 230 (258)
T PRK13548 229 LT 230 (258)
T ss_pred hC
Confidence 75
No 330
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-41 Score=369.59 Aligned_cols=211 Identities=36% Similarity=0.549 Sum_probs=181.8
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|+. .++++|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 578999999963 369999999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC------CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGKA------DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~~------~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
|+||++.+|.+ |++||+.++.. ...++++.++++..++.++. .....+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYA-----------NRKPSQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHH
Confidence 99999999975 99999976421 11123444555555554443 33446899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999998763 8999999999999865 899999999999999999999764
No 331
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1e-40 Score=368.33 Aligned_cols=216 Identities=29% Similarity=0.507 Sum_probs=185.3
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 689999999963 45999999999999999999999999999999999999999999999999987766544 45899
Q ss_pred EeccCCccC-cccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 425 LVNQEPVLF-ATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 425 ~v~Q~~~l~-~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
|++|++.++ ..|++||+.++.. ....++.. ..+.++++.+ |++........+||||||||++||||++++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999885 5699999986532 11221111 1234555555 777777788889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhcc
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
|+++||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999875 48999999999999877999999999999999999988753
No 332
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-41 Score=374.86 Aligned_cols=221 Identities=29% Similarity=0.497 Sum_probs=188.7
Q ss_pred ccccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecC---
Q 000846 1005 MRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIR--- 1076 (1255)
Q Consensus 1005 ~~g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~--- 1076 (1255)
..+.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 13 ~~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 13 TQQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 3567999999999963 3699999999999999999999999999999999999975 7999999998874
Q ss_pred -CCCHHHHhcceEEEccCCCCCcccHHHHHhcCCC--C-----CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCC
Q 000846 1077 -NYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKA--D-----ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQL 1148 (1255)
Q Consensus 1077 -~i~~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~-----~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~L 1148 (1255)
..+...+|++|+|+||++.+|.+|++||+.++.. . ..++++.++++.+++.+. +....+.....|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDE-------VKDRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchh-------hhHHHhCCcccC
Confidence 3345678899999999999999999999986521 1 113455556655554332 223345567789
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000846 1149 SGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1149 SgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1227 (1255)
|||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999998778999999999999965 9999999999999999
Q ss_pred CHHHHHhh
Q 000846 1228 SHNELVAL 1235 (1255)
Q Consensus 1228 ~~~eLl~~ 1235 (1255)
+++++...
T Consensus 243 ~~~~~~~~ 250 (265)
T PRK14252 243 ATDTIFIK 250 (265)
T ss_pred CHHHHHhC
Confidence 99999754
No 333
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=9e-41 Score=381.35 Aligned_cols=217 Identities=29% Similarity=0.462 Sum_probs=180.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 4699999999999999999999999999999999999999999999999998764 35678999
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILK 1164 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr 1164 (1255)
+|+||++.+|. .|++||+.+... ..+..+..+.++ .+.+.. .+++.+++. ..+||||||||++|||||++
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~ll~~~-~l~~~~~~~----~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIP--SLLEFA-RLESKADVR----VALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHH--HHHHHC-CChhHhcCc----hhhCCHHHHHHHHHHHHHhc
Confidence 99999999885 699999974211 123333322211 111111 233334444 45799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1165 NPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1165 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
+|++|||||||++||+.+.+.+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999874 58899999999999865 999999999999999999999753
No 334
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1e-40 Score=363.83 Aligned_cols=210 Identities=30% Similarity=0.485 Sum_probs=186.9
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCH----HHHhc
Q 000846 1010 ELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNL----KQLRS 1085 (1255)
Q Consensus 1010 ~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~----~~lR~ 1085 (1255)
.+.|++|+|+.+ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 567999999743 469999999999999999999999999999999999999999999999998876542 34577
Q ss_pred ceEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 000846 1086 HIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN 1165 (1255)
Q Consensus 1086 ~i~~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~ 1165 (1255)
.++|++|+|.+|+.|++||+.++.+ ..+++..++++..++.+++..+|.|+++.++....+||||||||++||||++++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999988653 345667788888898888898999999999988999999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHH--HHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000846 1166 PSILLLDEATSALDSVSESLVQE--ALEKMM-MGRTCVVVAHRLSTIQKSDTIAVIKNGR 1222 (1255)
Q Consensus 1166 p~ILlLDEaTSaLD~~te~~I~~--~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ 1222 (1255)
|++|||||||++||+.+...+.+ .++... .+.|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 444443 3789999999999998999999999884
No 335
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-41 Score=373.41 Aligned_cols=220 Identities=22% Similarity=0.425 Sum_probs=184.9
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHH-hcc
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQL-RSH 1086 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~l-R~~ 1086 (1255)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999988876554 456
Q ss_pred eEEEccCCCCCcc-cHHHHHhcCCCCCC--------------HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChH
Q 000846 1087 IALVSQEPTLFAG-TIRENIAYGKADAR--------------ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGG 1151 (1255)
Q Consensus 1087 i~~V~Qdp~LF~g-TIreNl~~g~~~~~--------------~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgG 1151 (1255)
++|+||+|.+|.+ |++||+.++..... ..+..+ ....+.++++.+ |++........+||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~--gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESE--ALDRAATWLERV--GLLEHANRQAGNLAYG 157 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhH--HHHHHHHHHHhC--ChhhhhhCChhhCCHH
Confidence 9999999999985 99999987531100 000000 111233444443 5555566677889999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000846 1152 QKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGS 1228 (1255)
Q Consensus 1152 QkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~ 1228 (1255)
||||++||||++.+|+||||||||++||+.+.+.+.+.|.+..+ ++|+|++||+++.+.+ ||++++|++|++++.|+
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~ 237 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGT 237 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999999999999999998753 7899999999999865 99999999999999999
Q ss_pred HHHHHh
Q 000846 1229 HNELVA 1234 (1255)
Q Consensus 1229 ~~eLl~ 1234 (1255)
++++..
T Consensus 238 ~~~~~~ 243 (255)
T PRK11300 238 PEEIRN 243 (255)
T ss_pred HHHHhh
Confidence 999865
No 336
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=5.7e-41 Score=369.90 Aligned_cols=216 Identities=28% Similarity=0.466 Sum_probs=185.1
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH-Hhccc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW-LRSQM 423 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 423 (1255)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 478999999963 35999999999999999999999999999999999999999999999999988776544 45689
Q ss_pred EEeccCCccCcc-cHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhcc
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIR 500 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~ 500 (1255)
+|++|++.+|.+ |++||+.++.+. ...++. ...+.+.++.+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKER-----EEKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999987 999999875321 111111 11234555555 67767778888999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 501 DPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 501 ~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 4899999999998775 599999999999999999988754
No 337
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-41 Score=373.59 Aligned_cols=218 Identities=31% Similarity=0.505 Sum_probs=183.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 1080 (1255)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999974 69999999999853 445
Q ss_pred HHHhcceEEEccCCCCCc-ccHHHHHhcCCC---CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHH
Q 000846 1081 KQLRSHIALVSQEPTLFA-GTIRENIAYGKA---DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~-gTIreNl~~g~~---~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1152 (1255)
..+|+.++|++|++.+|. .|++||+.++.. ..+ ++.+.++++..++.+++ +........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-------KDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHH
Confidence 678899999999999987 599999976421 111 22334445555443222 223345567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEe------CCEEEE
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQ-KSDTIAVIK------NGRVVE 1225 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~------~G~ive 1225 (1255)
|||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 9999999999999999999999999999999999999999877799999999999986 599999996 899999
Q ss_pred ecCHHHHHhh
Q 000846 1226 QGSHNELVAL 1235 (1255)
Q Consensus 1226 ~G~~~eLl~~ 1235 (1255)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999999764
No 338
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=371.59 Aligned_cols=218 Identities=32% Similarity=0.530 Sum_probs=185.7
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecC-CCCHH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIR-NYNLK 1081 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~-~i~~~ 1081 (1255)
.++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 4699999999999999999999999999999999999986 5999999999985 45667
Q ss_pred HHhcceEEEccCCCCCcccHHHHHhcCCC--CCC-H----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHH
Q 000846 1082 QLRSHIALVSQEPTLFAGTIRENIAYGKA--DAR-E----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQ 1154 (1255)
Q Consensus 1082 ~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~~-~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQ 1154 (1255)
.+|+.++|+||+|.+|..|++||+.++.. ... + +++.++++..++.+.+ .........+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEV-------KDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhh-------hHHhhcCcccCCHHHHH
Confidence 78999999999999999999999987532 111 1 2333444444443322 22334456789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1155 RIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1155 rlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999876 9999999999999999999987
Q ss_pred hh
Q 000846 1234 AL 1235 (1255)
Q Consensus 1234 ~~ 1235 (1255)
..
T Consensus 233 ~~ 234 (249)
T PRK14253 233 SN 234 (249)
T ss_pred cC
Confidence 53
No 339
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.7e-41 Score=381.94 Aligned_cols=218 Identities=29% Similarity=0.484 Sum_probs=182.7
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcc
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQ 422 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 422 (1255)
..|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 36999999999963 46999999999999999999999999999999999999999999999999987654 457889
Q ss_pred cEEeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 423 MGLVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 423 i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
||||||++.++. .|++||+.+... .....+..+. +.+.++.+ |+.........+||||||||++|||||+
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~aL~ 154 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFA--KLENKADAKVGELSGGMKRRLTLARALV 154 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchHhcCchhhCCHHHHHHHHHHHHHh
Confidence 999999999986 599999985321 1122222111 12333332 3433344455689999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhcc
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
.+|++|+|||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 155 ~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 155 NDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999885 48999999999999865 999999999999999999998653
No 340
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.1e-40 Score=367.73 Aligned_cols=211 Identities=32% Similarity=0.475 Sum_probs=180.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|+. +++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 578999999963 369999999999999999999999999999999999999999999999999986653 478899
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
|+||+|.+|.+ |++||+.++.. ..+ ++++.++++..++.++ ......+||+||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGL-----------GDRYPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhCChhhCCHHHHHHHHHHHH
Confidence 99999999975 99999986532 111 2233344444443332 233446899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
++++|+++||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998754 7999999999999865 999999999999999999999753
No 341
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.2e-41 Score=369.89 Aligned_cols=217 Identities=32% Similarity=0.573 Sum_probs=185.9
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCC--CHHHHhcc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRL--HLKWLRSQ 422 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~--~~~~~r~~ 422 (1255)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +...++++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 4599999999999999999999999999999999999999999999999998764 34567889
Q ss_pred cEEeccCCccCc-ccHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHh
Q 000846 423 MGLVNQEPVLFA-TSITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARAL 498 (1255)
Q Consensus 423 i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal 498 (1255)
++|++|++.++. .|++||+.++.. ....++.. ..+.+.++.+ |++.........||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAE-----KQARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999999886 599999987531 11122211 1223455555 676667777789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 499 IRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 499 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
+.+|++++|||||++||++++..+.+.|+++. +|+|+|++||+++.+. .||++++|++|++++.|+++++.+.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999998875 4899999999999986 4999999999999999999998764
No 342
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=374.81 Aligned_cols=216 Identities=30% Similarity=0.515 Sum_probs=185.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++||+++|++....++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334699999999999999999999999999999999999999999999999999877777788999
Q ss_pred EEeccCCc--cCcccHHHHhccCCC--CCCHHHH----HHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 424 GLVNQEPV--LFATSITENILFGKD--GASMDDV----ISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 424 ~~v~Q~~~--l~~~ti~~ni~~~~~--~~~~~~~----~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
+|++|+|. ++..|+.|||.++.. ....++. .++++.. |+..........||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAV-----------NMLDFKTREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHC-----------CCHhHhhCCcccCCHHHHHHHHHH
Confidence 99999984 567799999987532 2223222 2333333 333334455679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|||+++|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFA 229 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999998853 899999999999988899999999999999999999875
No 343
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-41 Score=388.13 Aligned_cols=218 Identities=27% Similarity=0.472 Sum_probs=185.5
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcc
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQ 422 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 422 (1255)
..|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+||+++.+.++ .++.
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 359999999999999999999999999999999999999999999999999987654 4678
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
||||+|++.+|+. ||+|||.|+... ....+..+ .+.+.++.+ |+.........+|||||||||+|||||+
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL~ 165 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSLA 165 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHh
Confidence 9999999999976 999999987431 12222211 122334444 5555556667799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccC
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
.+|++||||||||+||+.+++.+.+.|+++. .|.|+|+|||+++.+. .||+|++|++|++++.|+++++..++
T Consensus 166 ~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 166 KRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999998887763 3799999999999874 59999999999999999999998764
No 344
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=376.21 Aligned_cols=218 Identities=30% Similarity=0.534 Sum_probs=184.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecC--CCCHHHHhc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIR--RLHLKWLRS 421 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~--~~~~~~~r~ 421 (1255)
.|+++|++++|+. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 5899999999963 246999999999999999999999999999999999999999999999999984 334567888
Q ss_pred ccEEeccCC--ccCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHH
Q 000846 422 QMGLVNQEP--VLFATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARA 497 (1255)
Q Consensus 422 ~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARa 497 (1255)
.++|++|+| .+++.|++||+.++.. ..+.++..+. +.+.++.+ |+.......+.+||||||||++||||
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrl~lara 155 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGV 155 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHC--CChhhhhCCcccCCHHHHHHHHHHHH
Confidence 999999998 5778899999987532 1122222111 12333433 55555667788999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 498 LIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 498 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999988753 899999999999986 599999999999999999999865
No 345
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=374.01 Aligned_cols=214 Identities=29% Similarity=0.488 Sum_probs=186.1
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcc
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSH 1086 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~ 1086 (1255)
..|+++||+++|++ .++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 35999999999963 469999999999999999999999999999999999999999999999999998888888899
Q ss_pred eEEEccCCCCCc-ccHHHHHhcCC-CC---------CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHH
Q 000846 1087 IALVSQEPTLFA-GTIRENIAYGK-AD---------ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQR 1155 (1255)
Q Consensus 1087 i~~V~Qdp~LF~-gTIreNl~~g~-~~---------~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQr 1155 (1255)
|+|+||++.+|. .|++||+.++. +. ..++.+.++++..++.++ ......+||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHL-----------ADQSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-----------hcCCcccCChHHHHH
Confidence 999999998875 69999998752 11 112244555555555443 334457899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1156 IALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1156 lalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
++||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998753 7899999999998855 999999999999999999998
Q ss_pred Hh
Q 000846 1233 VA 1234 (1255)
Q Consensus 1233 l~ 1234 (1255)
+.
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 65
No 346
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=366.23 Aligned_cols=214 Identities=26% Similarity=0.467 Sum_probs=180.4
Q ss_pred eEEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH---H
Q 000846 344 EIEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW---L 419 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~ 419 (1255)
.++++||+++|+.+. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997422 146999999999999999999999999999999999999999999999999998877543 3
Q ss_pred h-cccEEeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 420 R-SQMGLVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 420 r-~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
+ +.++|++|++.+|.. |++||+.++.. ....++.. ..+.+.++.+ |++........+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN-----SRALEMLAAV--GLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHH
Confidence 3 679999999999876 99999987421 11122111 1223444444 666666777789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecC
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGS 564 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~ 564 (1255)
||++.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+..+|++++|++|++++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999874 4899999999999998889999999999998875
No 347
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.2e-40 Score=379.55 Aligned_cols=216 Identities=25% Similarity=0.446 Sum_probs=184.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
++++|++++|+ +..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++
T Consensus 3 l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 78999999996 3469999999999999999999999999999999999999999999999999977 4467889999
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN 1165 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~ 1165 (1255)
|+||+|.+|.+ |++||+.+... ..+.++..+ .+++.+..+ |++........+||||||||++|||||+++
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999876 99999975321 112222111 122233333 444445556678999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1166 PSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1166 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
|++|||||||++||+.+.+.+++.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999998778999999999999876 999999999999999999999763
No 348
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.8e-41 Score=367.64 Aligned_cols=208 Identities=33% Similarity=0.524 Sum_probs=175.1
Q ss_pred EEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH----HH
Q 000846 345 IEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK----WL 419 (1255)
Q Consensus 345 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~----~~ 419 (1255)
|+++||+++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46899999996421 14699999999999999999999999999999999999999999999999998876532 24
Q ss_pred hcccEEeccCCccCcc-cHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 420 RSQMGLVNQEPVLFAT-SITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 420 r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
+++++|++|++.+|.. |++||+.++... ....+. ...+.+.++.+ |++........+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 6789999999999986 999999875421 111111 11234455555 6666667777899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhhcCEEEEEeCCEE
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRTANLIMVLKAGKV 559 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~~d~i~vl~~G~i 559 (1255)
||+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998754 8999999999998888999999999974
No 349
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=376.14 Aligned_cols=225 Identities=29% Similarity=0.440 Sum_probs=186.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCCC--CH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRNY--NL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i--~~ 1080 (1255)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 39 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 5899999999963 359999999999999999999999999999999999864 4999999999998643 33
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|++++||||+|.+|..|++||+.++.. .. + ++++.++++..++.+.+ + .........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~----~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEV---S----DRLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccch---h----hHhhCChhhCCHHHH
Confidence 457889999999999998999999987531 11 1 12334444444432221 1 123445678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++|||||+.+|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.+ ||+|++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 999999999999999999999
Q ss_pred HhhhcCchhHH
Q 000846 1233 VALSRGGAYYS 1243 (1255)
Q Consensus 1233 l~~~~~g~y~~ 1243 (1255)
.+. +...|.+
T Consensus 269 ~~~-~~~~~~~ 278 (286)
T PRK14275 269 FTN-PKDRMTE 278 (286)
T ss_pred HhC-CCcHHHH
Confidence 864 3333433
No 350
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4.1e-41 Score=365.79 Aligned_cols=198 Identities=28% Similarity=0.488 Sum_probs=167.5
Q ss_pred EEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEE
Q 000846 1010 ELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIAL 1089 (1255)
Q Consensus 1010 ~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1089 (1255)
+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 35999999999999999999999999999999999999999999999998874 46889999
Q ss_pred EccCCCC---CcccHHHHHhcCCCC----------CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1090 VSQEPTL---FAGTIRENIAYGKAD----------ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1090 V~Qdp~L---F~gTIreNl~~g~~~----------~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
|||+|.+ |+.|++||+.++... ..++++.++++..++.++. .....+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELA-----------DRQIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHH-----------hCCcccCCHHHHHHH
Confidence 9999986 668999999875321 0123444555555554432 234567999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1227 (1255)
+|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999875 67899999999999865 8999999886 66654
No 351
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-41 Score=335.93 Aligned_cols=219 Identities=28% Similarity=0.471 Sum_probs=186.4
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
+++.+++++|++ ...+++||||+++.||+++|.|||||||||+++.|..++.|++|.|++||.|.... +...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcc
Confidence 678999999985 34589999999999999999999999999999999999999999999999998664 456788999
Q ss_pred EeccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCC
Q 000846 425 LVNQEPVLFAT-SITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPK 503 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~ 503 (1255)
+++-+..|+.. |++|||.|... ...+...--.+...+..+.| +++.....+..++|-|+||||+|||||++||+
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~---L~~l~~~~~kari~~l~k~l--~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~ 153 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFAR---LNGLSRKEIKARIAELSKRL--QLLEYLDRRVGEFSTGMKQKVAIARALVHDPS 153 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHH---HhhhhhhHHHHHHHHHHHHh--ChHHHHHHHHhhhchhhHHHHHHHHHHhcCCC
Confidence 99988888876 99999987432 11111111122333444445 66666667777999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcC-CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 504 ILLLDEATSALDAQSERIVQEAIDKVSK-GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 504 illlDEpts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
+++||||||+||..+.+.+.+.+.+++. |++||+.||.++.++ .||+|+++++|+++..|+.+++..+
T Consensus 154 i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 154 ILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred eEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999998865 999999999999997 5999999999999999999998753
No 352
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.4e-40 Score=382.01 Aligned_cols=217 Identities=29% Similarity=0.472 Sum_probs=182.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+ ...|++|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 4999999999963 46999999999999999999999999999999999999999999999999997654 5678999
Q ss_pred EEEccCCCCC-cccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 000846 1088 ALVSQEPTLF-AGTIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILK 1164 (1255)
Q Consensus 1088 ~~V~Qdp~LF-~gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr 1164 (1255)
+|+||++.+| ..|++||+.+... ..+.++..+.++ .+.++ -.+++..++.+ .+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~ll~~-~~L~~~~~~~~----~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIP--SLLEF-ARLESKADARV----SDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHH--HHHHH-cCCchhhCCCh----hhCCHHHHHHHHHHHHHhc
Confidence 9999999986 5699999975321 122222222111 11111 13444444444 5799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1165 NPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1165 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
+|++|||||||++||+.+.+.+++.|++.. .|+|+|++||+++.+.+ ||+|++|++|++++.|+++++++.
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999875 48999999999999965 999999999999999999999763
No 353
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.1e-40 Score=367.35 Aligned_cols=232 Identities=27% Similarity=0.461 Sum_probs=197.9
Q ss_pred HHHHHHhcCCCCCCCCCcccccCCCccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhc
Q 000846 316 TRIFEMVDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQR 395 (1255)
Q Consensus 316 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g 395 (1255)
+.+.+.+..+++++.. .+.....+.|+++|+++.. .++|+|+||+|++||+++|+||||||||||+++|+|
T Consensus 15 ~~~~~~~~~~~~~~~~----~~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~G 85 (282)
T cd03291 15 EGFGELLEKAKQENND----RKHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILG 85 (282)
T ss_pred HHHHHHHhcccccccc----cccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 4555666555443221 2223344579999999952 359999999999999999999999999999999999
Q ss_pred ccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccc
Q 000846 396 FYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYET 475 (1255)
Q Consensus 396 ~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 475 (1255)
+++|++|+|.++| .|+|++|++.+|+.|++||+.++.. ....++.+.++..++.+.+..+|.++++
T Consensus 86 l~~p~~G~I~i~g-------------~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~ 151 (282)
T cd03291 86 ELEPSEGKIKHSG-------------RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNT 151 (282)
T ss_pred CCCCCCcEEEECC-------------EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccc
Confidence 9999999999998 4999999999999999999998643 2233455666667888889999999999
Q ss_pred hhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHH-HHhcCCCeEEEEecCchhhhhcCEEEEE
Q 000846 476 QVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAI-DKVSKGRTTLIIAHRLSTIRTANLIMVL 554 (1255)
Q Consensus 476 ~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l-~~~~~~~t~i~itH~~~~~~~~d~i~vl 554 (1255)
.+++.+.+||||||||++|||||+.+|++|||||||++||+.++..+.+.+ +.+.+++|+|++||+++.+..||++++|
T Consensus 152 ~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l 231 (282)
T cd03291 152 VLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILIL 231 (282)
T ss_pred eecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999888754 5666689999999999998889999999
Q ss_pred eCCEEEEecChhHHhc
Q 000846 555 KAGKVVESGSHNELMN 570 (1255)
Q Consensus 555 ~~G~i~~~g~~~~l~~ 570 (1255)
++|++++.|+++++..
T Consensus 232 ~~G~i~~~g~~~~~~~ 247 (282)
T cd03291 232 HEGSSYFYGTFSELQS 247 (282)
T ss_pred ECCEEEEECCHHHHHh
Confidence 9999999999999875
No 354
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=8.6e-41 Score=349.99 Aligned_cols=172 Identities=42% Similarity=0.722 Sum_probs=162.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|+.. +.++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999742 246999999999999999999999999999999999999999999999999999998888999999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 000846 1089 LVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSI 1168 (1255)
Q Consensus 1089 ~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~I 1168 (1255)
|++|+|.+|++|++||+ ||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000846 1169 LLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQKSDTIAVIKNGRV 1223 (1255)
Q Consensus 1169 LlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~i 1223 (1255)
|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999999875 48899999999999988999999999974
No 355
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-41 Score=388.28 Aligned_cols=205 Identities=33% Similarity=0.539 Sum_probs=173.3
Q ss_pred ccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHH----hcccEEeccCCccCcc-
Q 000846 361 LVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWL----RSQMGLVNQEPVLFAT- 435 (1255)
Q Consensus 361 ~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~l~~~- 435 (1255)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++...+...+ +++++||+|++.+|..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999988776543 4689999999999975
Q ss_pred cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCC
Q 000846 436 SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSA 513 (1255)
Q Consensus 436 ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~ 513 (1255)
|++||+.++.. ....++.. ..+.+.++.+ |++........+||||||||++|||||+.+|++|||||||++
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~-----~~~~e~L~~~--gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~ 194 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERR-----EKALDALRQV--GLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSA 194 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 99999997632 11111111 1122334444 555555566679999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccC
Q 000846 514 LDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 514 lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
||+.+++.+++.|.++. .|+|+|++||+++.+. .||+|++|++|++++.|+++++..++
T Consensus 195 LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~ 256 (400)
T PRK10070 195 LDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNP 256 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCc
Confidence 99999999999998874 4899999999999875 59999999999999999999998753
No 356
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=371.64 Aligned_cols=225 Identities=29% Similarity=0.468 Sum_probs=185.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----CceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPL-----KGSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~~ 1080 (1255)
-|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 3889999999963 46999999999999999999999999999999999999874 8999999999875 345
Q ss_pred HHHhcceEEEccCCCCCc-ccHHHHHhcCCC--CC-CHHHHHHH----HHHhcHHHHHHccccccccccCCCCCCCChHH
Q 000846 1081 KQLRSHIALVSQEPTLFA-GTIRENIAYGKA--DA-RESEIKKA----AVLANAHEFISGMKDGYDTYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~-gTIreNl~~g~~--~~-~~~ei~~a----l~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1152 (1255)
..+|+.|+|+||+|.+|. .|++||+.++.. .. .+++..+. ++..++.+. +++.+++ ...+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~---l~~~~~~----~~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE---VKDRLKT----PATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh---hhhhhcC----CcccCCHHH
Confidence 577899999999999988 499999976431 11 23333222 222222221 2223343 456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHH
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNE 1231 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~e 1231 (1255)
|||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.+ ||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999876 89999999999999999999
Q ss_pred HHhhhcCchhHH
Q 000846 1232 LVALSRGGAYYS 1243 (1255)
Q Consensus 1232 Ll~~~~~g~y~~ 1243 (1255)
++.. +...|.+
T Consensus 234 ~~~~-~~~~~~~ 244 (252)
T PRK14272 234 LFTN-PRDERTE 244 (252)
T ss_pred HHhC-cCcHHHH
Confidence 9875 4444433
No 357
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=7.2e-41 Score=365.44 Aligned_cols=211 Identities=28% Similarity=0.496 Sum_probs=177.8
Q ss_pred EEEEeEEEEcCCCCC-CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 345 IEFRDVYFCYPSRPD-TLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
|+++||+++|++... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ...++++++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 269999999999999999999999999999999999999999999999999875 345678899
Q ss_pred EEeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhcc
Q 000846 424 GLVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIR 500 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~ 500 (1255)
+|++|+|.+|.. |++||+.+... ....++.. ..+.+.++.+ |++........+||||||||++||||++.
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELT-----ARLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhc
Confidence 999999999986 99999976421 11122211 1223445554 66666677788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 000846 501 DPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESG 563 (1255)
Q Consensus 501 ~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g 563 (1255)
+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+. .||++++|++|++++.|
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999998874 4899999999999875 59999999999998764
No 358
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-40 Score=361.34 Aligned_cols=201 Identities=28% Similarity=0.488 Sum_probs=173.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++ .. .|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|++++
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 579999999963 22 39999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC-C-----CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGKA-D-----ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~~-~-----~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
|+||+|.+|.+ |++||+.++.. . .+++++.++++..++.++.... ..+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRL-----------PGELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHHHHHH
Confidence 99999999975 99999986532 1 1234566666666665554433 35799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1227 (1255)
++++|++|||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 37899999999999966 9999999999998865
No 359
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=370.62 Aligned_cols=218 Identities=30% Similarity=0.449 Sum_probs=188.0
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCCC--CH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRNY--NL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~ 1080 (1255)
.+.+++++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 3889999999952 4699999999999999999999999999999999999987 799999999998643 44
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC-----CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA-----DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQR 1155 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~-----~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQr 1155 (1255)
..+|++|+|+||+|.+|..|++||+.++.. ....+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 567889999999999999999999987632 1122456666766665444322 2345677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe--------CCEEEEe
Q 000846 1156 IALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIK--------NGRVVEQ 1226 (1255)
Q Consensus 1156 lalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~--------~G~ive~ 1226 (1255)
++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998778999999999998865 99999996 8999999
Q ss_pred cCHHHHHhh
Q 000846 1227 GSHNELVAL 1235 (1255)
Q Consensus 1227 G~~~eLl~~ 1235 (1255)
|+++++++.
T Consensus 238 g~~~~~~~~ 246 (261)
T PRK14263 238 GPTAQIFQN 246 (261)
T ss_pred CCHHHHHhC
Confidence 999999864
No 360
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.3e-40 Score=372.01 Aligned_cols=212 Identities=27% Similarity=0.451 Sum_probs=183.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEccCCC-CCcccHHHHHhcCCCC----------CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHH
Q 000846 1089 LVSQEPT-LFAGTIRENIAYGKAD----------ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIA 1157 (1255)
Q Consensus 1089 ~V~Qdp~-LF~gTIreNl~~g~~~----------~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrla 1157 (1255)
|+||++. .+..|++||+.++... ..++++.++++..++.+. .......||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHL-----------ADRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCHHHHHHHH
Confidence 9999995 4568999999875311 011234444444444332 33445689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000846 1158 LARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1158 lARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
||||++.+|+++||||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999999875 4789999999999995 599999999999999999999865
No 361
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.9e-40 Score=368.51 Aligned_cols=218 Identities=32% Similarity=0.537 Sum_probs=184.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCC--------
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLH-------- 415 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~-------- 415 (1255)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 3899999999973 35999999999999999999999999999999999999999999999999986532
Q ss_pred HHHHhcccEEeccCCccCc-ccHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHH
Q 000846 416 LKWLRSQMGLVNQEPVLFA-TSITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQR 491 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqr 491 (1255)
...++++++||+|++.+|. .|++||+.++.. ....++.. ..+.+.++.+ |++......+.+||||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qr 152 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEAT-----ARARELLAKV--GLAGKETSYPRRLSGGQQQR 152 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCcchhhCChhhCChHHHHH
Confidence 3456789999999999886 599999986421 11111111 1123445555 66655677788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000846 492 IAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELM 569 (1255)
Q Consensus 492 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 569 (1255)
++|||||+.+|++|||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 153 VAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998875 48999999999999864 9999999999999999999987
Q ss_pred cc
Q 000846 570 NR 571 (1255)
Q Consensus 570 ~~ 571 (1255)
+.
T Consensus 233 ~~ 234 (250)
T PRK11264 233 AD 234 (250)
T ss_pred cC
Confidence 64
No 362
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-41 Score=376.00 Aligned_cols=213 Identities=31% Similarity=0.562 Sum_probs=181.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCC--CCHHHHhcc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRN--YNLKQLRSH 1086 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--i~~~~lR~~ 1086 (1255)
|+++||+++|++ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2369999999999999999999999999999999999999999999999999852 234567899
Q ss_pred eEEEccCC--CCCcccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHH
Q 000846 1087 IALVSQEP--TLFAGTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIAL 1158 (1255)
Q Consensus 1087 i~~V~Qdp--~LF~gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlal 1158 (1255)
|+|+||+| .+|..|++||+.++.. ..+. +++.++++..++.++ ......+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGF-----------ENKPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchh-----------hcCChhhCCHHHHHHHHH
Confidence 99999998 4788999999986531 1222 233444444444322 223356799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000846 1159 ARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1159 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~ 1234 (1255)
|||++.+|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999875 48999999999999874 99999999999999999999875
No 363
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.4e-40 Score=365.74 Aligned_cols=208 Identities=28% Similarity=0.392 Sum_probs=175.6
Q ss_pred cEEEEEEEEECCCCCC-CccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH---H
Q 000846 1008 RIELKNVFFAYPTRPD-QMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ---L 1083 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~-~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---l 1083 (1255)
.|+++||+++|++... .++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999974211 35999999999999999999999999999999999999999999999999998877653 2
Q ss_pred -hcceEEEccCCCCCcc-cHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHH
Q 000846 1084 -RSHIALVSQEPTLFAG-TIRENIAYGKA--DAR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQR 1155 (1255)
Q Consensus 1084 -R~~i~~V~Qdp~LF~g-TIreNl~~g~~--~~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQr 1155 (1255)
+++++|+||+|.+|.. |++||+.++.. ... .+++.++++..++.++.. .....||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLD-----------HLPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHHHHH
Confidence 3689999999999875 99999975321 111 234445555555544432 3345799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000846 1156 IALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQ 1226 (1255)
Q Consensus 1156 lalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~ 1226 (1255)
++|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||++++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999998742 7899999999999988999999999999874
No 364
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.2e-41 Score=361.93 Aligned_cols=199 Identities=30% Similarity=0.506 Sum_probs=168.3
Q ss_pred EEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEE
Q 000846 346 EFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGL 425 (1255)
Q Consensus 346 ~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 425 (1255)
+++|++++|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999641 469999999999999999999999999999999999999999999999998754 456778999
Q ss_pred eccCC--ccCcccHHHHhccCCCCCC--HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 426 VNQEP--VLFATSITENILFGKDGAS--MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 426 v~Q~~--~l~~~ti~~ni~~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
++|+| .++..|++||+.++.+... .+++.++++..++. .........||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLY-----------ALKERHPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCc-----------hhcCCCchhCCHHHHHHHHHHHHHHhC
Confidence 99998 4677899999987643221 22344444444443 334445568999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCCeEEEEecCchhhh-hcCEEEEEeCCEEE
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKV-SKGRTTLIIAHRLSTIR-TANLIMVLKAGKVV 560 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~-~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~ 560 (1255)
|++|||||||++||+.+++.+.+.|+++ .+|+|+|++||+++.+. .||++++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999887 45899999999999986 49999999999975
No 365
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-40 Score=363.66 Aligned_cols=213 Identities=28% Similarity=0.475 Sum_probs=176.9
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 3599999999999999999999999999999999999999999999999988653 356678899
Q ss_pred EeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 425 LVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
|++|++.++.. |++||+.++.. ....++.. ..+.+.++.+ |++........+||||||||++||||++.+
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~ 149 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERR-----ERIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHR 149 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999998875 99999986421 11111111 1122333333 444444455679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVS-K-GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l 568 (1255)
|+++||||||++||+++.+.+.+.|+++. + |+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 150 PEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999998874 3 7899999999999864 999999999999999987764
No 366
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=371.46 Aligned_cols=219 Identities=33% Similarity=0.531 Sum_probs=186.2
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----CceEEECCeecCC--CC
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPL-----KGSVFMDEQDIRN--YN 1079 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~ 1079 (1255)
+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 35999999999999999999999999999999999999985 8999999999853 34
Q ss_pred HHHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHH
Q 000846 1080 LKQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQ 1152 (1255)
Q Consensus 1080 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQ 1152 (1255)
...+|+.++|+||++.+|..|++||+.++.. .. + ++.+.++++..++.+++. ...+..+.+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIK-------HKIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhh-------hHhcCCcccCCHHH
Confidence 5678899999999999999999999976421 11 1 233455555555544433 22345667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeC-----CEEE
Q 000846 1153 KQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKN-----GRVV 1224 (1255)
Q Consensus 1153 kQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~-----G~iv 1224 (1255)
|||++|||||+++|+||||||||++||+++...+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999863 48999999999999865 899999999 9999
Q ss_pred EecCHHHHHhh
Q 000846 1225 EQGSHNELVAL 1235 (1255)
Q Consensus 1225 e~G~~~eLl~~ 1235 (1255)
+.|+++++...
T Consensus 236 ~~~~~~~~~~~ 246 (261)
T PRK14258 236 EFGLTKKIFNS 246 (261)
T ss_pred EeCCHHHHHhC
Confidence 99999999764
No 367
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=370.81 Aligned_cols=219 Identities=31% Similarity=0.499 Sum_probs=184.5
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCC--CC
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRR--LH 415 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 415 (1255)
..|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 46999999999963 359999999999999999999999999999999999987 689999999999863 45
Q ss_pred HHHHhcccEEeccCCccCcccHHHHhccCCCCC--C---HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHH
Q 000846 416 LKWLRSQMGLVNQEPVLFATSITENILFGKDGA--S---MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQ 490 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrq 490 (1255)
...+|++++|++|++.+|..|++||+.++.... . .+++.++++..++ ..++++.......+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAV-------WDECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCC-------cchhhhhhCCCcccCCHHHHH
Confidence 667788999999999999889999998764211 1 1122222333222 123344556677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeC-----------CE
Q 000846 491 RIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKA-----------GK 558 (1255)
Q Consensus 491 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~-----------G~ 558 (1255)
|++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 99999999999999999999999999999999999998877899999999999885 5999999996 67
Q ss_pred EEEecChhHHhcc
Q 000846 559 VVESGSHNELMNR 571 (1255)
Q Consensus 559 i~~~g~~~~l~~~ 571 (1255)
+++.|+++++...
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 9999999998764
No 368
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.5e-40 Score=363.61 Aligned_cols=204 Identities=27% Similarity=0.466 Sum_probs=172.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH---Hhc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ---LRS 1085 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---lR~ 1085 (1255)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++... +|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 246999999999999999999999999999999999999999999999999998776543 688
Q ss_pred ceEEEccCCCC-CcccHHHHHhcCC--CCCCHHH----HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHH
Q 000846 1086 HIALVSQEPTL-FAGTIRENIAYGK--ADARESE----IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIAL 1158 (1255)
Q Consensus 1086 ~i~~V~Qdp~L-F~gTIreNl~~g~--~~~~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlal 1158 (1255)
.++|+||+|.+ +..|++||+.++. ...++++ +.++++..++.++ ......+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDK-----------AKNFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCCchhCCHHHHHHHHH
Confidence 99999999986 4679999998752 1223332 3344444444333 233456899999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000846 1159 ARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVE 1225 (1255)
Q Consensus 1159 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive 1225 (1255)
|||++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999874 47899999999999976 89999999999853
No 369
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.9e-40 Score=357.85 Aligned_cols=200 Identities=37% Similarity=0.574 Sum_probs=179.6
Q ss_pred EEEEeEEEEcCCCCC--CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcc
Q 000846 345 IEFRDVYFCYPSRPD--TLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQ 422 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 422 (1255)
|+++||+++|++..+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 478999999974311 3699999999999999999999999999999999999999999999998 6
Q ss_pred cEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCC
Q 000846 423 MGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDP 502 (1255)
Q Consensus 423 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~ 502 (1255)
|+|++|+|.+|+.|++||+.++.. ...++..++++.+++.+++..+|.|+++.+++.+.+||||||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998643 3345666777788888999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHH-HHHHh-cCCCeEEEEecCchhhhhcCEEEEEeCCE
Q 000846 503 KILLLDEATSALDAQSERIVQE-AIDKV-SKGRTTLIIAHRLSTIRTANLIMVLKAGK 558 (1255)
Q Consensus 503 ~illlDEpts~lD~~~~~~i~~-~l~~~-~~~~t~i~itH~~~~~~~~d~i~vl~~G~ 558 (1255)
+++||||||++||+++.+.+.+ .+++. .+|+|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 45655 34799999999999987799999999985
No 370
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.3e-40 Score=364.38 Aligned_cols=212 Identities=35% Similarity=0.531 Sum_probs=174.7
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCH---HHHh
Q 000846 1009 IELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNL---KQLR 1084 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~lR 1084 (1255)
|+++||+++|+.+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996421 1269999999999999999999999999999999999999999999999999988763 5778
Q ss_pred cceEEEccCC--CCC-cccHHHHHhcCCC----CCCHHHHHHHHHHhcHHHHHHccccccc-cccCCCCCCCChHHHHHH
Q 000846 1085 SHIALVSQEP--TLF-AGTIRENIAYGKA----DARESEIKKAAVLANAHEFISGMKDGYD-TYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1085 ~~i~~V~Qdp--~LF-~gTIreNl~~g~~----~~~~~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgGQkQrl 1156 (1255)
++++|+||+| .++ ..|+++|+.++.. ...+++..++. .+++..+ |++ ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 8999999999 344 5799999975421 11111111111 1233332 342 334566678999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEec
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G 1227 (1255)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998764 799999999999987 59999999999998865
No 371
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=372.15 Aligned_cols=218 Identities=28% Similarity=0.440 Sum_probs=182.4
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCCC--CH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRRL--HL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~~--~~ 416 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++... +.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5999999999963 459999999999999999999999999999999999864 7999999999998643 34
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCCC--C-CH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKDG--A-SM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
..++++++|++|++.+|++|++||+.++... . .. +.+.++++..++. .++....+..+.+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALW-------DEVKDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCC-------cchHHHHhcCcccCCHHHH
Confidence 5678899999999999999999999875321 1 11 1122222222211 1122345677789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999877889999999999875 5999999999999999999998
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
..+
T Consensus 251 ~~~ 253 (268)
T PRK14248 251 FTS 253 (268)
T ss_pred HhC
Confidence 764
No 372
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=370.17 Aligned_cols=218 Identities=30% Similarity=0.485 Sum_probs=182.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC--C---CccEEEECCeecCC--CCH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD--P---VEGEVLLDGYKIRR--LHL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~--~---~~G~i~~~g~~~~~--~~~ 416 (1255)
.|+++|+++.|+. .++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 5899999999973 359999999999999999999999999999999999997 3 59999999999864 345
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCCC---CCHHH----HHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKDG---ASMDD----VISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
..+|+.++|++|++.+|+.|++||+.++... ...++ +.++++..++.+ .+.+.....+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWD-------EVKDRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhhhhhhCCcccCCHHHH
Confidence 5678899999999999989999999875321 11122 122222222221 112345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++||||++++|+++||||||++||++++..+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999985 5999999999999999999998
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
.++
T Consensus 242 ~~~ 244 (259)
T PRK14274 242 FSN 244 (259)
T ss_pred hhC
Confidence 764
No 373
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-40 Score=361.89 Aligned_cols=203 Identities=26% Similarity=0.444 Sum_probs=173.0
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++|.|++ .++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++...+ ..++++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 578999999964 35999999999999 99999999999999999999999999999999999987766 66788999
Q ss_pred EeccCCccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHH
Q 000846 425 LVNQEPVLFAT-SITENILFGKD--GAS----MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARA 497 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARa 497 (1255)
|++|+|.+|.. |++||+.+... ... .+++.++++..++. ........+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLG-----------DRAKKKIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCH-----------HHHhCchhhCCHHHHHHHHHHHH
Confidence 99999999986 99999986421 111 12233333333333 33344557899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 000846 498 LIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESG 563 (1255)
Q Consensus 498 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g 563 (1255)
++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998877799999999999986 59999999999998765
No 374
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=379.86 Aligned_cols=222 Identities=30% Similarity=0.462 Sum_probs=183.1
Q ss_pred eEEEEeEEEEcCCCC-------CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH
Q 000846 344 EIEFRDVYFCYPSRP-------DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~-------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~ 416 (1255)
-|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999997321 2469999999999999999999999999999999999999999999999999988764
Q ss_pred H---HHhcccEEeccCC--ccCcc-cHHHHhccCC---CCCCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCCCCCh
Q 000846 417 K---WLRSQMGLVNQEP--VLFAT-SITENILFGK---DGASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGFQMSG 486 (1255)
Q Consensus 417 ~---~~r~~i~~v~Q~~--~l~~~-ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSg 486 (1255)
. .+|++|+||+|+| .|+.. ||.+|+..+. ......+. ...+.++++.+ |++ ........+|||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gL~~~~~~~~p~~LSg 157 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAER-----REKALAMMAKV--GLRPEHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHC--CCChHHhcCCCccCCH
Confidence 3 5678999999999 35554 9999886421 11111111 11223344444 443 234556789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 000846 487 GQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESG 563 (1255)
Q Consensus 487 Gqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g 563 (1255)
|||||++|||||+.+|++||+||||++||..++..+.+.|+++.+ |.|+|+|||+++.+. .||+|++|++|+|+|.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999999998743 899999999999996 59999999999999999
Q ss_pred ChhHHhccC
Q 000846 564 SHNELMNRG 572 (1255)
Q Consensus 564 ~~~~l~~~~ 572 (1255)
+.+++++++
T Consensus 238 ~~~~~~~~p 246 (327)
T PRK11308 238 TKEQIFNNP 246 (327)
T ss_pred CHHHHhcCC
Confidence 999998764
No 375
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=369.05 Aligned_cols=218 Identities=33% Similarity=0.477 Sum_probs=183.5
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCCCCHHH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRRLHLKW 418 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~~~~~ 418 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 3599999999999999999999999999999999999974 6999999999998877778
Q ss_pred HhcccEEeccCCccC-cccHHHHhccCCCC----CCH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 419 LRSQMGLVNQEPVLF-ATSITENILFGKDG----ASM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 419 ~r~~i~~v~Q~~~l~-~~ti~~ni~~~~~~----~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
+|+.|+|++|+|.+| ..|++||+.++... ... +++.++++..++.+ .++........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWD-------EVKDRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCc-------chhhhhcCCcccCCHHHH
Confidence 889999999999766 56999999875321 011 12223333332211 112334566789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++|||||+++|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999999998877899999999999985 5999999999999999999998
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14247 233 FTN 235 (250)
T ss_pred HcC
Confidence 754
No 376
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1e-40 Score=365.11 Aligned_cols=209 Identities=27% Similarity=0.461 Sum_probs=179.5
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+++|++ .++++|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 4999999999963 4699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccCCCCCcccHHHHHhcCC---CCC-CHHHHHHHHHHhcHHHHHHccccccc-cccCCCCCCCChHHHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFAGTIRENIAYGK---ADA-RESEIKKAAVLANAHEFISGMKDGYD-TYCGERGVQLSGGQKQRIALARAI 1162 (1255)
Q Consensus 1088 ~~V~Qdp~LF~gTIreNl~~g~---~~~-~~~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgGQkQrlalARAL 1162 (1255)
+|+||++.+|+.|++||+.++. ... .++++.+. ++.+ |++ +.......+||||||||++|||||
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~---------l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral 152 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDD---------LERF--ALPDTILTKNIAELSGGEKQRISLIRNL 152 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHH---------HHHc--CCChHHhcCCcccCCHHHHHHHHHHHHH
Confidence 9999999999999999997631 111 12222233 3332 332 234556778999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEe-CCEEEEecCHH
Q 000846 1163 LKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQKSDTIAVIK-NGRVVEQGSHN 1230 (1255)
Q Consensus 1163 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~-~G~ive~G~~~ 1230 (1255)
+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+..||++++|+ ++..+++|+|+
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 153 QFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999999999875 3789999999999998899999994 67777888885
No 377
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-40 Score=363.88 Aligned_cols=209 Identities=31% Similarity=0.499 Sum_probs=181.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++||+++|+. . ..|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 789999999963 2 249999999999999999999999999999999999999999999999887654 357899
Q ss_pred EEccCCCCCcc-cHHHHHhcCC-CC-----CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGK-AD-----ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~-~~-----~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
|+||++.+|.+ |++||+.++. +. ..++++.++++..++.+++...| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999985 9999998652 21 12345667777777666554433 4799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
++++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999865 899999999999999999999863
No 378
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-40 Score=371.43 Aligned_cols=218 Identities=32% Similarity=0.496 Sum_probs=186.3
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CCceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP-----LKGSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~ 1080 (1255)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 20 ~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 5999999999963 3699999999999999999999999999999999999863 68999999999864 344
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKAD-----ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQR 1155 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~-----~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQr 1155 (1255)
..+|++|+|+||++.+|+.|++||+.++... ..++++.++++.+++.+++. ......+..||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVK-------DKLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhH-------HHhcCCcccCCHHHHHH
Confidence 5678999999999999989999999875311 11334455566666544332 12344567899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe---------CCEEEE
Q 000846 1156 IALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIK---------NGRVVE 1225 (1255)
Q Consensus 1156 lalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~---------~G~ive 1225 (1255)
++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||++++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998778999999999999864 99999997 899999
Q ss_pred ecCHHHHHhh
Q 000846 1226 QGSHNELVAL 1235 (1255)
Q Consensus 1226 ~G~~~eLl~~ 1235 (1255)
.|+++++.+.
T Consensus 250 ~g~~~~~~~~ 259 (274)
T PRK14265 250 FSPTEQMFGS 259 (274)
T ss_pred eCCHHHHHhC
Confidence 9999999864
No 379
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=367.71 Aligned_cols=219 Identities=34% Similarity=0.547 Sum_probs=183.6
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCC--CC
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRR--LH 415 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 415 (1255)
|.|+++||++.|++ .++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999973 3599999999999999999999999999999999999863 69999999999864 34
Q ss_pred HHHHhcccEEeccCCccCcccHHHHhccCCCC--C-CH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHH
Q 000846 416 LKWLRSQMGLVNQEPVLFATSITENILFGKDG--A-SM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQ 488 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 488 (1255)
...+|+.++|++|++.+|+.|++||+.++... . .. +++.++++..++.+ ++.......+.+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWD-------EVKDRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhHHHHhcCCCCCCHHH
Confidence 55678899999999999989999999875321 1 11 12222233332221 22234566778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhH
Q 000846 489 KQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNE 567 (1255)
Q Consensus 489 rqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~ 567 (1255)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999998877899999999999875 599999999999999999999
Q ss_pred Hhcc
Q 000846 568 LMNR 571 (1255)
Q Consensus 568 l~~~ 571 (1255)
+...
T Consensus 232 ~~~~ 235 (250)
T PRK14240 232 LFTN 235 (250)
T ss_pred HHhC
Confidence 8754
No 380
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=370.85 Aligned_cols=218 Identities=32% Similarity=0.495 Sum_probs=182.6
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecC--CCCH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIR--RLHL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~--~~~~ 416 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999987 4999999999987 4455
Q ss_pred HHHhcccEEeccCCccCcc-cHHHHhccCCC--C--CCHHH----HHHHHHHhchHHHHhcCCCcccchhcCCCCCCChH
Q 000846 417 KWLRSQMGLVNQEPVLFAT-SITENILFGKD--G--ASMDD----VISAAKAANAHDFITKLPDGYETQVGQLGFQMSGG 487 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 487 (1255)
..+|++++|++|++.+|.. |++||+.++.. . ...++ +.++++..++.+ .+.........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWD-------EVKDRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCcc-------chhhhhccChhhCCHH
Confidence 5678899999999999976 99999987531 1 01111 222222222211 1123456677899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChh
Q 000846 488 QKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHN 566 (1255)
Q Consensus 488 qrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~ 566 (1255)
||||++|||||+++|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999998877899999999999975 59999999999999999999
Q ss_pred HHhcc
Q 000846 567 ELMNR 571 (1255)
Q Consensus 567 ~l~~~ 571 (1255)
++...
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 98753
No 381
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=370.92 Aligned_cols=219 Identities=31% Similarity=0.557 Sum_probs=184.8
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCC--------
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRL-------- 414 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~-------- 414 (1255)
+.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 56999999999973 4599999999999999999999999999999999999999999999999988542
Q ss_pred -----CHHHHhcccEEeccCCccCcc-cHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCcccchh-cCCCCCC
Q 000846 415 -----HLKWLRSQMGLVNQEPVLFAT-SITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYETQV-GQLGFQM 484 (1255)
Q Consensus 415 -----~~~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-~~~g~~L 484 (1255)
....++++++|++|++.+|.. |++||+.++.. .....+. ...+.+.++.+ |+.... .....+|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEA-----RERAVKYLAKV--GIDERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHH-----HHHHHHHHHHc--CCChhhhhCCcccC
Confidence 134667899999999999975 99999986421 1111111 11223445554 555543 5677899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEe
Q 000846 485 SGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVES 562 (1255)
Q Consensus 485 SgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~ 562 (1255)
|||||||++|||||+++|+++||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999875 48999999999999875 999999999999999
Q ss_pred cChhHHhcc
Q 000846 563 GSHNELMNR 571 (1255)
Q Consensus 563 g~~~~l~~~ 571 (1255)
|+++++...
T Consensus 234 ~~~~~~~~~ 242 (257)
T PRK10619 234 GAPEQLFGN 242 (257)
T ss_pred CCHHHhhhC
Confidence 999998754
No 382
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.3e-40 Score=369.28 Aligned_cols=217 Identities=33% Similarity=0.535 Sum_probs=184.7
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCC---------
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLH--------- 415 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~--------- 415 (1255)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 578999999973 35999999999999999999999999999999999999999999999999986543
Q ss_pred ----HHHHhcccEEeccCCccCc-ccHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChH
Q 000846 416 ----LKWLRSQMGLVNQEPVLFA-TSITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGG 487 (1255)
Q Consensus 416 ----~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 487 (1255)
...+|+.++|++|++.+|. .|+.||+.++.. ....++.. ..+.+.++.+ |++......+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2456889999999999886 699999987521 11111111 1234455555 6666667777899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecC
Q 000846 488 QKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGS 564 (1255)
Q Consensus 488 qrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~ 564 (1255)
||||++|||||+.+|+++||||||++||+.++..+.+.|+++.+ |+|+|++||+++.+. .||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988743 899999999999985 599999999999999999
Q ss_pred hhHHhcc
Q 000846 565 HNELMNR 571 (1255)
Q Consensus 565 ~~~l~~~ 571 (1255)
++++.+.
T Consensus 231 ~~~~~~~ 237 (252)
T TIGR03005 231 PDEIFRQ 237 (252)
T ss_pred HHHHhcC
Confidence 9998764
No 383
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=367.41 Aligned_cols=219 Identities=33% Similarity=0.530 Sum_probs=184.7
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCC-----ccEEEECCeecCCC--CH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPV-----EGEVLLDGYKIRRL--HL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~-----~G~i~~~g~~~~~~--~~ 416 (1255)
.|+++|++|+|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 35999999999999999999999999999999999999997 69999999998643 44
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCCC--CC-HHH----HHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKDG--AS-MDD----VISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~-~~~----~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
..+|+.++||+|+|.+|+.|++||+.++... .. .++ +.++++..++. +++.+.....+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALW-------DEVKDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCc-------hhhhhHhhCCcccCCHHHH
Confidence 5778899999999999989999999876321 11 111 22222222222 2233446677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 899999999999999999998
Q ss_pred hccC
Q 000846 569 MNRG 572 (1255)
Q Consensus 569 ~~~~ 572 (1255)
...+
T Consensus 234 ~~~~ 237 (251)
T PRK14249 234 FSRP 237 (251)
T ss_pred HhCC
Confidence 7653
No 384
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=370.04 Aligned_cols=218 Identities=31% Similarity=0.499 Sum_probs=183.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CCceEEECCeecCC--CCH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD--P---LKGSVFMDEQDIRN--YNL 1080 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--i~~ 1080 (1255)
.|+++||+++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999963 469999999999999999999999999999999999975 4 58999999999864 344
Q ss_pred HHHhcceEEEccCCCCCcccHHHHHhcCCC--CC-C----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1081 KQLRSHIALVSQEPTLFAGTIRENIAYGKA--DA-R----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~--~~-~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
..+|++++|+||+|.+|..|+++|+.++.. .. . ++++.++++.+++.+. +.........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------i~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDE-------VKDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccc-------hhhHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1 2233344444443322 22233455678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 999999999999999999999
Q ss_pred Hhh
Q 000846 1233 VAL 1235 (1255)
Q Consensus 1233 l~~ 1235 (1255)
...
T Consensus 235 ~~~ 237 (252)
T PRK14255 235 FLN 237 (252)
T ss_pred hcC
Confidence 764
No 385
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.8e-40 Score=369.70 Aligned_cols=226 Identities=25% Similarity=0.422 Sum_probs=186.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCee-----cCCCCHHH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQD-----IRNYNLKQ 1082 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~i~~~~ 1082 (1255)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999963 369999999999999999999999999999999999999999999999999 87776554
Q ss_pred ----HhcceEEEccCCC--CC-cccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHccccccc-cccCCCCCCCChH
Q 000846 1083 ----LRSHIALVSQEPT--LF-AGTIRENIAYGK---ADARESEIKKAAVLANAHEFISGMKDGYD-TYCGERGVQLSGG 1151 (1255)
Q Consensus 1083 ----lR~~i~~V~Qdp~--LF-~gTIreNl~~g~---~~~~~~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgG 1151 (1255)
+|+.++||||++. ++ ..|+.+|+.+.. ......++. ..+.+++..+ |++ +.....+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 33 358888985421 011112221 1234555555 343 3456778899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000846 1152 QKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGS 1228 (1255)
Q Consensus 1152 QkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~ 1228 (1255)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.+ ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998753 7899999999999974 99999999999999999
Q ss_pred HHHHHhhhcCchhHHH
Q 000846 1229 HNELVALSRGGAYYSL 1244 (1255)
Q Consensus 1229 ~~eLl~~~~~g~y~~l 1244 (1255)
++++... +...|.+.
T Consensus 236 ~~~~~~~-~~~~~~~~ 250 (258)
T PRK11701 236 TDQVLDD-PQHPYTQL 250 (258)
T ss_pred HHHHhcC-CCCHHHHH
Confidence 9999864 34445544
No 386
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=370.95 Aligned_cols=217 Identities=31% Similarity=0.541 Sum_probs=184.9
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCC-HHHHhccc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLH-LKWLRSQM 423 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~r~~i 423 (1255)
++++|++++|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 235999999999999999999999999999999999999999999999999997765 45678899
Q ss_pred EEeccCCc--cCcccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 424 GLVNQEPV--LFATSITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 424 ~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
+|++|+|. +++.|++|||.++... .+.++..+ .+.+.++.+ |++......+..||||||||++|||||+
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~ 152 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRK-----RVDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGILT 152 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 5667999999876321 12222211 122334444 5655666677899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
.+|++|||||||++||+.++..+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 153 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 153 MEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999999998875 4899999999999998899999999999999999998865
No 387
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=365.87 Aligned_cols=218 Identities=25% Similarity=0.380 Sum_probs=182.4
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH-HHhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK-WLRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~-~~r~~ 422 (1255)
.|+++|++++|++ .++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..++.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999887754 46788
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
++|++|++.+|.+ |++||+.++......++..+. +.+.+..++ +++........+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQER-----IKWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHH-----HHHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 999999876422222222111 122222222 122233456679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|+|+||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999998874 4899999999999874 599999999999999999999864
No 388
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.8e-40 Score=372.21 Aligned_cols=220 Identities=31% Similarity=0.474 Sum_probs=183.5
Q ss_pred eEEEEeEEEEcCCC------CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH
Q 000846 344 EIEFRDVYFCYPSR------PDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK 417 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~------~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~ 417 (1255)
.|+++||+|.|+.. .+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999632 135699999999999999999999999999999999999999999999999999877653
Q ss_pred ---HHhcccEEeccCCc--cCc-ccHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCCCCChH
Q 000846 418 ---WLRSQMGLVNQEPV--LFA-TSITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGFQMSGG 487 (1255)
Q Consensus 418 ---~~r~~i~~v~Q~~~--l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgG 487 (1255)
.+|+.|+|++|+|. ++. .|++||+.++.. ....++ ....+.+.++.+ |++ ......+.+||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~--gl~~~~~~~~~~~LSgG 154 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESE-----QKARIAELLDMV--GLRSEDADKLPRQLSGG 154 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHc--CCChhhhhCChhhCCHH
Confidence 36778999999983 443 599999975321 111111 111233445555 564 3456778899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecC
Q 000846 488 QKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGS 564 (1255)
Q Consensus 488 qrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~ 564 (1255)
||||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+. .||++++|++|++++.|+
T Consensus 155 e~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (265)
T TIGR02769 155 QLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECD 234 (265)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECC
Confidence 99999999999999999999999999999999999999998753 899999999999986 599999999999999999
Q ss_pred hhHHhc
Q 000846 565 HNELMN 570 (1255)
Q Consensus 565 ~~~l~~ 570 (1255)
++++..
T Consensus 235 ~~~~~~ 240 (265)
T TIGR02769 235 VAQLLS 240 (265)
T ss_pred HHHHcC
Confidence 999976
No 389
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-41 Score=362.54 Aligned_cols=205 Identities=24% Similarity=0.504 Sum_probs=171.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 578999999963 469999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN 1165 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~ 1165 (1255)
|+||++.+|.+ |++||+.++.. ..+..+.. ..+.+++..+ |++........+||||||||++||||++.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999999875 99999976421 11111111 1223333333 344444455678999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000846 1166 PSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1166 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1227 (1255)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999875 47899999999999865 9999999999998865
No 390
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=369.54 Aligned_cols=227 Identities=27% Similarity=0.443 Sum_probs=188.1
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECC------eecCCCCHH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDE------QDIRNYNLK 1081 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG------~di~~i~~~ 1081 (1255)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+..
T Consensus 10 ~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 4999999999963 4699999999999999999999999999999999999999986666554 677777777
Q ss_pred HHhcceEEEccCCCCCcc-cHHHHHhcCCC--CC-CHHH----HHHHHHHhcHHHHHHccccccccccCCCCCCCChHHH
Q 000846 1082 QLRSHIALVSQEPTLFAG-TIRENIAYGKA--DA-RESE----IKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1082 ~lR~~i~~V~Qdp~LF~g-TIreNl~~g~~--~~-~~~e----i~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQk 1153 (1255)
.+|++++|+||+|.+|.+ |+++|+.++.. .. .+++ +.++++..++.+++ +......+..||||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEV-------YDRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccc-------hhhhcCCcccCCHHHH
Confidence 889999999999999975 99999986532 11 2222 23344444433222 1123445678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
||++||||++++|++|||||||++||+.+++.+.+.|++..+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999998877899999999999994 5999999999999999999999
Q ss_pred HhhhcCchhHHHH
Q 000846 1233 VALSRGGAYYSLI 1245 (1255)
Q Consensus 1233 l~~~~~g~y~~l~ 1245 (1255)
.+. +...|.+.+
T Consensus 240 ~~~-~~~~~~~~~ 251 (257)
T PRK14246 240 FTS-PKNELTEKY 251 (257)
T ss_pred HhC-CCcHHHHHH
Confidence 864 455565543
No 391
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=369.80 Aligned_cols=220 Identities=30% Similarity=0.496 Sum_probs=182.5
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCCCC--H
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRRLH--L 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~~--~ 416 (1255)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++...+ .
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 6999999999963 3599999999999999999999999999999999999985 7999999999986532 3
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcC--CCcccchhcCCCCCCChHHHHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKD--GASMDDVISAAKAANAHDFITKL--PDGYETQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqrqri 492 (1255)
..+++.++|++|++.+|+.|++||+.++.. ....++..+ .+.+.++.+ .............+||||||||+
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv 163 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDG-----VVENALRSAALWDETSDRLKSPALSLSGGQQQRL 163 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHH
Confidence 456788999999999999999999987531 112221111 112222222 11112345566789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++..+
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 243 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFHN 243 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999998877899999999999985 5999999999999999999998764
No 392
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-40 Score=364.03 Aligned_cols=210 Identities=31% Similarity=0.537 Sum_probs=181.1
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 578999999962 27999999999999999999999999999999999999999999999999987654 378999
Q ss_pred EEccCCCCCc-ccHHHHHhcCCCC--CC----HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFA-GTIRENIAYGKAD--AR----ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~-gTIreNl~~g~~~--~~----~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
|+||++.+|. .|++||+.++... .+ ++++.++++..++.+++. ....+||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLN-----------RKPETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHh-----------cCcccCCHHHHHHHHHHHH
Confidence 9999999885 7999999865321 11 233445555555544433 3346799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
++++|++|+|||||++||+.+.+.+.+.+++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|+++++++.
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 220 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKK 220 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999998753 8999999999999875 999999999999999999999864
No 393
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.8e-40 Score=372.82 Aligned_cols=218 Identities=23% Similarity=0.416 Sum_probs=183.6
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH---HHh
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK---WLR 420 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~r 420 (1255)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .++
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 5899999999963 4599999999999999999999999999999999999999999999999998766543 357
Q ss_pred cccEEeccCCccCcc-cHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 421 SQMGLVNQEPVLFAT-SITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
++++|++|++.+|.. |++||+.++.. ....++.. ..+.+.+..+ |+.........+||||||||++|||
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrv~lar 156 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLH-----STVMMKLEAV--GLRGAAKLMPSELSGGMARRAALAR 156 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999986 99999986421 11111111 1122334444 5554555667899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhcc
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQAN 234 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998743 7999999999998865 999999999999999999998764
No 394
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-40 Score=376.72 Aligned_cols=219 Identities=33% Similarity=0.563 Sum_probs=186.4
Q ss_pred ccEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCCceEEECCeecCCC--C
Q 000846 1007 GRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD-----PLKGSVFMDEQDIRNY--N 1079 (1255)
Q Consensus 1007 g~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i--~ 1079 (1255)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46999999999963 469999999999999999999999999999999999986 6899999999998753 4
Q ss_pred HHHHhcceEEEccCCCCCcccHHHHHhcCCCC-------------------CCHHHHHHHHHHhcHHHHHHccccccccc
Q 000846 1080 LKQLRSHIALVSQEPTLFAGTIRENIAYGKAD-------------------ARESEIKKAAVLANAHEFISGMKDGYDTY 1140 (1255)
Q Consensus 1080 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~g~~~-------------------~~~~ei~~al~~a~l~~~i~~lp~gldt~ 1140 (1255)
...+|++|+||||++.+|.+|++||+.++... ..++++.++++..++ +.++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAAL-------WDEVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCC-------chhhhHH
Confidence 56788999999999999999999999875210 012233444444433 2234445
Q ss_pred cCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEE-EEE
Q 000846 1141 CGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQK-SDTI-AVI 1218 (1255)
Q Consensus 1141 vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I-~Vl 1218 (1255)
+...+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++ ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 56777899999999999999999999999999999999999999999999998777899999999999865 9997 567
Q ss_pred eCCEEEEecCHHHHHhh
Q 000846 1219 KNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1219 ~~G~ive~G~~~eLl~~ 1235 (1255)
++|++++.|+++++++.
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999999763
No 395
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.6e-40 Score=363.56 Aligned_cols=209 Identities=30% Similarity=0.515 Sum_probs=175.2
Q ss_pred EEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH---Hh
Q 000846 345 IEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW---LR 420 (1255)
Q Consensus 345 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~r 420 (1255)
|+++||+++|++.. ..++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996421 246999999999999999999999999999999999999999999999999998776543 33
Q ss_pred -cccEEeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 421 -SQMGLVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 421 -~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
+.++|++|++.+|. .|++||+.++.. .....+.. ..+.++++.+ |++........+||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAK-----ERAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 68999999999986 499999987421 11111111 1123445554 6666667777899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhhcCEEEEEeCCEEE
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRTANLIMVLKAGKVV 560 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~~d~i~vl~~G~i~ 560 (1255)
|++.+|++|||||||++||++++..+.+.|+++. .++|+|++||+++.+..+|+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999998874 379999999999998889999999999985
No 396
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=370.94 Aligned_cols=219 Identities=30% Similarity=0.563 Sum_probs=186.0
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 34699999999999999999999999999999999999999999999999999877777888999
Q ss_pred EEeccCCc--cCcccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 424 GLVNQEPV--LFATSITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 424 ~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
+|++|+|. ++..|++||+.++... .+.++..+ .+.+.++.+ |++........+||||||||++|||||+
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLA 158 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999984 4567999999875321 12222211 122334444 5555566667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 159 ~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 159 LNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999998753 489999999999887899999999999999999988865
No 397
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2e-40 Score=382.67 Aligned_cols=205 Identities=24% Similarity=0.402 Sum_probs=172.0
Q ss_pred CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCe----ecCCCCHHHH---h-cccEEeccCCc
Q 000846 360 TLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGY----KIRRLHLKWL---R-SQMGLVNQEPV 431 (1255)
Q Consensus 360 ~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~----~~~~~~~~~~---r-~~i~~v~Q~~~ 431 (1255)
..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||. ++...+...+ | ++|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 45899999999999999999999999999999999999999999999996 5666655443 3 58999999999
Q ss_pred cCc-ccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEe
Q 000846 432 LFA-TSITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLD 508 (1255)
Q Consensus 432 l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlD 508 (1255)
+|+ .|++||+.++... ...++. ...+.+.++.+ |++........+||||||||++|||||+.+|+|||||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~-----~~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlD 189 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAER-----RKRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMD 189 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 997 5999999986421 111111 11223334443 5554555566789999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhh-hhcCEEEEEeCCEEEEecChhHHhcc
Q 000846 509 EATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTI-RTANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 509 Epts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~-~~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
||||+||+.+++.+++.|.++.+ ++|+|+|||+++.+ +.||+|++|++|++++.|++++++.+
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 190 EPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 99999999999999999988753 89999999999997 56999999999999999999999875
No 398
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3e-40 Score=366.42 Aligned_cols=222 Identities=24% Similarity=0.418 Sum_probs=187.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH-Hhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW-LRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 422 (1255)
-|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 2 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 3789999999973 35999999999999999999999999999999999999999999999999988776554 4567
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCCCC-H-HH---HHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDGAS-M-DD---VISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~-~-~~---~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
++|++|++.+|.+ |++||+.++..... . .. .........+.+.++.+ |++........+||||||||++|||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHH
Confidence 9999999999987 99999987532100 0 00 00011122334556655 6766677788899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|++.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999999999999999999999999998778999999999999864 99999999999999999998864
No 399
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-40 Score=372.17 Aligned_cols=220 Identities=30% Similarity=0.532 Sum_probs=185.4
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCc---cEEEECCeecCCCCHHHH
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVE---GEVLLDGYKIRRLHLKWL 419 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~---G~i~~~g~~~~~~~~~~~ 419 (1255)
+.|+++|++|+|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 369999999999642 2459999999999999999999999999999999999999998 899999999987777778
Q ss_pred hcccEEeccCCc--cCcccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 420 RSQMGLVNQEPV--LFATSITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 420 r~~i~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
++++|||+|+|. +++.|++|||.++... .+.++..+ .+.+.++.+ |++........+||||||||++||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~la 155 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADV--GMLDYIDSEPANLSGGQKQRVAIA 155 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHH
Confidence 889999999984 5677999999876321 22222111 112223333 444445556679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|||+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999988743 899999999999988899999999999999999998865
No 400
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.8e-40 Score=359.39 Aligned_cols=203 Identities=28% Similarity=0.436 Sum_probs=173.3
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.++... ..++++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 478999999963 4699999999999999999999999999999999999999999999999988654 45677899
Q ss_pred EeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 425 LVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 425 ~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
||+|++.++. .|++||+.++.. ....+++.++++..++. .........||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLK-----------DSAKKKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCH-----------HHHhhhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998885 699999987532 12233444444444443 334455678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESG 563 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g 563 (1255)
|+++||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+. .||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998875 4899999999999986 59999999999998765
No 401
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-40 Score=372.94 Aligned_cols=220 Identities=30% Similarity=0.561 Sum_probs=184.9
Q ss_pred eEEEEeEEEEcCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCC----CHH
Q 000846 344 EIEFRDVYFCYPSRP--DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRL----HLK 417 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~----~~~ 417 (1255)
.|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996321 14699999999999999999999999999999999999999999999999998643 245
Q ss_pred HHhcccEEeccCC--ccCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCCCCChHHHHHH
Q 000846 418 WLRSQMGLVNQEP--VLFATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 418 ~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqrqri 492 (1255)
..++.++|++|+| .+|..|++|||.++.. ....++..+ .+.+.+..+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6778999999998 5777899999987532 122222211 123445554 665 345677889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|.|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999875 4899999999999985 599999999999999999998865
No 402
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=371.30 Aligned_cols=213 Identities=31% Similarity=0.461 Sum_probs=182.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5999999999973 3599999999999999999999999999999999999999999999999999887777888899
Q ss_pred EEeccCCccCcc-cHHHHhccCCCCC----------CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHH
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDGA----------SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri 492 (1255)
+|++|++.++.+ |+.||+.++.... ..+++.++++..++ +........+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGL-----------KPLAHRLVDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCC-----------HHHhcCCcccCCHHHHHHH
Confidence 999999877665 9999998753210 11223333444433 3334445568999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHh
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-K-GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELM 569 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~ 569 (1255)
+||||++.+|++|||||||++||+.+.+.+.+.|+++. + |+|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999874 3 799999999999985 59999999999999999998875
Q ss_pred c
Q 000846 570 N 570 (1255)
Q Consensus 570 ~ 570 (1255)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 4
No 403
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.3e-40 Score=362.22 Aligned_cols=205 Identities=33% Similarity=0.559 Sum_probs=171.0
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCC--CCHHHHhcc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRN--YNLKQLRSH 1086 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--i~~~~lR~~ 1086 (1255)
|+++||+++|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 578999999963 369999999999999999999999999999999999999999999999999853 455677899
Q ss_pred eEEEccCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHH
Q 000846 1087 IALVSQEPTLFA-GTIRENIAYGKA---DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAI 1162 (1255)
Q Consensus 1087 i~~V~Qdp~LF~-gTIreNl~~g~~---~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARAL 1162 (1255)
++|+||+|.+|. .|++||+.++.. ..+.++..+ .+.+++..+ |++........+||||||||++||||+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999886 699999977532 122222111 112233332 344444455678999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000846 1163 LKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRV 1223 (1255)
Q Consensus 1163 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~i 1223 (1255)
+++|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.+ ||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999875 47899999999999965 999999999975
No 404
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=366.44 Aligned_cols=217 Identities=25% Similarity=0.452 Sum_probs=186.7
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH-Hhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW-LRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 422 (1255)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .|+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 4889999999963 36999999999999999999999999999999999999999999999999998776543 5778
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCC---CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHh
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDG---ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARAL 498 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal 498 (1255)
++|++|++.+|.. |++||+.++... ...++ ....+.+.++.+ |++........+||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQ-----REDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHH-----HHHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998875 999999875321 11111 112334556666 676667778889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 499 IRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 499 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+.+|++|||||||++||+.+.+.+.+.++++. +|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999998875 4899999999998775 599999999999999999998865
No 405
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=370.66 Aligned_cols=220 Identities=33% Similarity=0.551 Sum_probs=185.4
Q ss_pred cceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCC--C
Q 000846 342 RGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRR--L 414 (1255)
Q Consensus 342 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~ 414 (1255)
.+.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 446999999999963 3599999999999999999999999999999999999884 89999999999864 3
Q ss_pred CHHHHhcccEEeccCCccCcccHHHHhccCCC--CC-CH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChH
Q 000846 415 HLKWLRSQMGLVNQEPVLFATSITENILFGKD--GA-SM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGG 487 (1255)
Q Consensus 415 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 487 (1255)
+...+|+.++|++|++.+|+.|++||+.++.. .. .. +++.++++..++.+ .+.+..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWD-------EVKDRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCh-------hHHHHhhCCcccCCHH
Confidence 45677889999999999998899999987532 11 11 12233333333222 2224566778899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChh
Q 000846 488 QKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHN 566 (1255)
Q Consensus 488 qrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~ 566 (1255)
||||++||||++++|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 99999999999999999999999999999999999999998877899999999999975 59999999999999999999
Q ss_pred HHhcc
Q 000846 567 ELMNR 571 (1255)
Q Consensus 567 ~l~~~ 571 (1255)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 98754
No 406
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-40 Score=373.21 Aligned_cols=220 Identities=31% Similarity=0.508 Sum_probs=183.7
Q ss_pred eEEEEeEEEEcCCCC---CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCC-HHHH
Q 000846 344 EIEFRDVYFCYPSRP---DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLH-LKWL 419 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~---~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~ 419 (1255)
.|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.. ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999987643 3567
Q ss_pred hcccEEeccCCc--cCcccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 420 RSQMGLVNQEPV--LFATSITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 420 r~~i~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
+++++|++|+|. ++..|+.||+.|+... ....+..+ .+.+.++.+ |+.........+||||||||++||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~la 156 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRE-----RVDESLKKV--GMYEYRRHAPHLLSGGQKQRVAIA 156 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHH-----HHHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHH
Confidence 889999999984 6667999999886321 12221111 112223333 444445555679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|||+.+|+++||||||++||+.++..+.+.|+++. .|+|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 157 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 157 GILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFK 233 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999874 3899999999999987799999999999999999999875
No 407
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=368.11 Aligned_cols=218 Identities=29% Similarity=0.466 Sum_probs=181.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhccc--CC---CccEEEECCeecCCC--CH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFY--DP---VEGEVLLDGYKIRRL--HL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~--~~---~~G~i~~~g~~~~~~--~~ 416 (1255)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|++ .| ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999973 35999999999999999999999999999999999995 36 599999999998643 34
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCC--CCC-H----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKD--GAS-M----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~-~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
..+|+.++||+|++.+|+.|++||+.++.. ... . +++.++++..++.+ ++.+..+....+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWD-------EVKDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCch-------hHHHHHhcCcccCCHHHH
Confidence 567889999999999999999999986521 111 1 11222222222211 223445677789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877899999999999875 5999999999999999999998
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
.+.
T Consensus 235 ~~~ 237 (252)
T PRK14239 235 FMN 237 (252)
T ss_pred HhC
Confidence 764
No 408
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-40 Score=368.64 Aligned_cols=220 Identities=30% Similarity=0.488 Sum_probs=185.4
Q ss_pred cceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCC--C
Q 000846 342 RGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRR--L 414 (1255)
Q Consensus 342 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~ 414 (1255)
...|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.+||+++.. .
T Consensus 18 ~~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 346999999999963 469999999999999999999999999999999999996 589999999999864 3
Q ss_pred CHHHHhcccEEeccCCccCcccHHHHhccCCCC--C-CH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChH
Q 000846 415 HLKWLRSQMGLVNQEPVLFATSITENILFGKDG--A-SM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGG 487 (1255)
Q Consensus 415 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 487 (1255)
+...+|+.++|++|++.+|..|++||+.++... . .. +++.++++..++.+ +.++..+..+.+||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWD-------QVKDDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCc-------hhhhhhcCCcccCCHH
Confidence 455678899999999999989999999875321 1 11 11222233333221 2234566778899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChh
Q 000846 488 QKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHN 566 (1255)
Q Consensus 488 qrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~ 566 (1255)
||||++||||++++|++|||||||++||+.+.+.+.+.|+++.++.|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999998877899999999999885 59999999999999999999
Q ss_pred HHhcc
Q 000846 567 ELMNR 571 (1255)
Q Consensus 567 ~l~~~ 571 (1255)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14237 248 NIFTN 252 (267)
T ss_pred HHhcC
Confidence 98753
No 409
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-40 Score=372.19 Aligned_cols=219 Identities=31% Similarity=0.549 Sum_probs=184.2
Q ss_pred EEEEeEEEEcCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCC----CHHH
Q 000846 345 IEFRDVYFCYPSRP--DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRL----HLKW 418 (1255)
Q Consensus 345 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~----~~~~ 418 (1255)
|+++||+++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 13699999999999999999999999999999999999999999999999998754 3456
Q ss_pred HhcccEEeccCC--ccCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCCCCChHHHHHHH
Q 000846 419 LRSQMGLVNQEP--VLFATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGFQMSGGQKQRIA 493 (1255)
Q Consensus 419 ~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqrqri~ 493 (1255)
+|+.|+|++|+| .+|+.|++||+.++.. ..+.++..+. +.+.++.+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 5788899999987532 1222222211 22334444 554 3456677899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 494 IARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 494 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|||||+.+|++|||||||++||+++++.+.+.|+++. +|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999998875 4899999999999885 599999999999999999998865
No 410
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-40 Score=370.78 Aligned_cols=218 Identities=29% Similarity=0.539 Sum_probs=183.6
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
-++++|++++|++. .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++++
T Consensus 3 ~l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 37899999999632 3599999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEeccCCc--cCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 424 GLVNQEPV--LFATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 424 ~~v~Q~~~--l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
+||+|+|. +|+.|++||+.++.. ..+.++..+ .+.+.+..+ |+..........||||||||++|||||+
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrl~laraL~ 153 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHML--GLEELRDRVPHHLSGGEKKRVAIAGVIA 153 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 677899999987532 122221111 112333333 4444445556799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
.+|++|||||||++||+.+.+.+.+.++++.+ |+|+|++||+++.+. .||+|++|++|++++.|+++++++
T Consensus 154 ~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 154 MEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 99999999999999999999999999988753 899999999999985 699999999999999999999875
No 411
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=379.27 Aligned_cols=222 Identities=25% Similarity=0.425 Sum_probs=179.5
Q ss_pred eEEEEeEEEEcCCCCC-CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC----CCccEEEECCeecCCCCHHH
Q 000846 344 EIEFRDVYFCYPSRPD-TLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD----PVEGEVLLDGYKIRRLHLKW 418 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~----~~~G~i~~~g~~~~~~~~~~ 418 (1255)
-++++|+++.|+.... ..+|+||||+|++||+++|||+||||||||+++|+|+++ |++|+|.++|+++..++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999974321 359999999999999999999999999999999999997 48999999999998887665
Q ss_pred Hh----cccEEeccCCc--cCcc-cHHHHhccCC---CCCCHHHHHHHHHHhchHHHHhcCCCccc---chhcCCCCCCC
Q 000846 419 LR----SQMGLVNQEPV--LFAT-SITENILFGK---DGASMDDVISAAKAANAHDFITKLPDGYE---TQVGQLGFQMS 485 (1255)
Q Consensus 419 ~r----~~i~~v~Q~~~--l~~~-ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~~~g~~LS 485 (1255)
++ +.|+||+|+|. +++. |+.+|+.... .....++.. ..+.+.++.+ |++ ...+..+.+||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~-----~~~~~~L~~~--gL~~~~~~l~~~p~~LS 155 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRR-----QRAIDLLNQV--GIPDPASRLDVYPHQLS 155 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChHHHHhCCchhCC
Confidence 43 37999999994 4433 6666554211 011111111 1122334443 442 34567788999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEe
Q 000846 486 GGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVES 562 (1255)
Q Consensus 486 gGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~ 562 (1255)
|||||||+|||||+.+|++||+||||++||+.++..+.+.|+++.+ |.|+|+|||+++.+. .||+|++|++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998853 899999999999985 5999999999999999
Q ss_pred cChhHHhccC
Q 000846 563 GSHNELMNRG 572 (1255)
Q Consensus 563 g~~~~l~~~~ 572 (1255)
|+++++.+++
T Consensus 236 g~~~~~~~~p 245 (326)
T PRK11022 236 GKAHDIFRAP 245 (326)
T ss_pred CCHHHHhhCC
Confidence 9999998764
No 412
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-40 Score=373.82 Aligned_cols=222 Identities=28% Similarity=0.489 Sum_probs=183.5
Q ss_pred cceEEEEeEEEEcCCCC--CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCC----C-
Q 000846 342 RGEIEFRDVYFCYPSRP--DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRR----L- 414 (1255)
Q Consensus 342 ~~~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~----~- 414 (1255)
.+.|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 35799999999997432 1359999999999999999999999999999999999999999999999998852 2
Q ss_pred CHHHHhcccEEeccCC--ccCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcc-cchhcCCCCCCChHHH
Q 000846 415 HLKWLRSQMGLVNQEP--VLFATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGY-ETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 415 ~~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~-~t~~~~~g~~LSgGqr 489 (1255)
+...+|+.|+|++|+| .+|..|++||+.++.. ....++..+. +.+.++.+ |+ +........+||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~--~L~~~~~~~~~~~LS~Gq~ 156 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLV--QLPEDYVKRSPFELSGGQK 156 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhcCChhhCCHHHH
Confidence 3456788999999998 4677899999987532 1222222211 12233333 44 2345567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChh
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHN 566 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~ 566 (1255)
||++|||||+.+|++|||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPF 236 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998874 3899999999999875 59999999999999999998
Q ss_pred HHhc
Q 000846 567 ELMN 570 (1255)
Q Consensus 567 ~l~~ 570 (1255)
++..
T Consensus 237 ~~~~ 240 (289)
T PRK13645 237 EIFS 240 (289)
T ss_pred HHhc
Confidence 8865
No 413
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-40 Score=366.92 Aligned_cols=220 Identities=26% Similarity=0.458 Sum_probs=183.2
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC--C---CccEEEECCeecCCC--C
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD--P---VEGEVLLDGYKIRRL--H 415 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~--~---~~G~i~~~g~~~~~~--~ 415 (1255)
+.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++... .
T Consensus 3 ~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 56999999999973 359999999999999999999999999999999999986 4 689999999998643 3
Q ss_pred HHHHhcccEEeccCCccCc-ccHHHHhccCCCC---CCHH----HHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChH
Q 000846 416 LKWLRSQMGLVNQEPVLFA-TSITENILFGKDG---ASMD----DVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGG 487 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 487 (1255)
...+|+.++|++|++.+|. .|++||+.++... ...+ ++.++++..++.+. +....+..+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDE-------VKDRLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchh-------hhHHhhCCcCcCCHH
Confidence 4567889999999999998 4999999865311 1111 12222333332211 122345667899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChh
Q 000846 488 QKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHN 566 (1255)
Q Consensus 488 qrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~ 566 (1255)
||||++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999999877899999999999985 59999999999999999999
Q ss_pred HHhccC
Q 000846 567 ELMNRG 572 (1255)
Q Consensus 567 ~l~~~~ 572 (1255)
++...+
T Consensus 233 ~~~~~~ 238 (252)
T PRK14256 233 KIFTTP 238 (252)
T ss_pred HHHhCC
Confidence 987653
No 414
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=368.46 Aligned_cols=220 Identities=31% Similarity=0.496 Sum_probs=182.6
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcc---cCC--CccEEEECCeecCCC--CH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRF---YDP--VEGEVLLDGYKIRRL--HL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~---~~~--~~G~i~~~g~~~~~~--~~ 416 (1255)
.|+++|+++.|+. .++|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.++|+++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999963 3599999999999999999999999999999999997 454 589999999998754 34
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCCC--CC-HHHHHHHHHHhchHHHHhcC--CCcccchhcCCCCCCChHHHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKDG--AS-MDDVISAAKAANAHDFITKL--PDGYETQVGQLGFQMSGGQKQR 491 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~-~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqrqr 491 (1255)
..++++++|+||++.+|..|++||+.++... .. .+...+ .+.+.++.+ ++.+.+.....+.+||||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQ-----RVEETLKGAALWDEVKDKLKESAFALSGGQQQR 154 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHH-----HHHHHHHHcCCCcchhhhhhCCcccCCHHHHHH
Confidence 5678899999999999988999999875321 11 111111 112223322 1122345567788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 492 IAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 492 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999999999999999999877899999999999985 599999999999999999999976
Q ss_pred c
Q 000846 571 R 571 (1255)
Q Consensus 571 ~ 571 (1255)
+
T Consensus 235 ~ 235 (250)
T PRK14245 235 N 235 (250)
T ss_pred C
Confidence 4
No 415
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-41 Score=332.54 Aligned_cols=215 Identities=29% Similarity=0.464 Sum_probs=182.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..|+.|++|+|+|||.|+.. ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 678999999974 3458999999999999999999999999999999999999999999999999988 5678899999
Q ss_pred EEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHcc--ccccccccCCCCCCCChHHHHHHHHHHHHc
Q 000846 1089 LVSQEPTLFA-GTIRENIAYGKA--DARESEIKKAAVLANAHEFISGM--KDGYDTYCGERGVQLSGGQKQRIALARAIL 1163 (1255)
Q Consensus 1089 ~V~Qdp~LF~-gTIreNl~~g~~--~~~~~ei~~al~~a~l~~~i~~l--p~gldt~vge~G~~LSgGQkQrlalARALl 1163 (1255)
+++-+.-|+. .|.||||.|... +.+..++. +.+.+....| .+-+|..+ .+||-|+|||++|||||+
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~k-----ari~~l~k~l~l~~~~~rRv----~~~S~G~kqkV~iARAlv 149 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIK-----ARIAELSKRLQLLEYLDRRV----GEFSTGMKQKVAIARALV 149 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHH-----HHHHHHHHHhChHHHHHHHH----hhhchhhHHHHHHHHHHh
Confidence 9997777775 599999987532 23333331 2222333322 12244444 459999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1164 KNPSILLLDEATSALDSVSESLVQEALEKMMM-GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1164 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
++|+|++||||||+||.-+.+.+++-|.+... |++||+-||-++.++ -||+|+++.+|+++..|+++++.+.
T Consensus 150 h~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 150 HDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred cCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 99999999999999999999999999999875 999999999999998 5999999999999999999999764
No 416
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.4e-40 Score=348.51 Aligned_cols=178 Identities=40% Similarity=0.661 Sum_probs=165.0
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 4789999999743 23699999999999999999999999999999999999999999999999988765 566788999
Q ss_pred EeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCE
Q 000846 425 LVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKI 504 (1255)
Q Consensus 425 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~i 504 (1255)
|++|+|.+|+.|++||+ +.+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 458999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEec
Q 000846 505 LLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVESG 563 (1255)
Q Consensus 505 lllDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g 563 (1255)
|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999998764
No 417
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.2e-40 Score=378.15 Aligned_cols=216 Identities=27% Similarity=0.462 Sum_probs=181.6
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 5899999999963 3599999999999999999999999999999999999999999999999998653 35668899
Q ss_pred EEeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhcc
Q 000846 424 GLVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIR 500 (1255)
Q Consensus 424 ~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~ 500 (1255)
||+||++.++. .|++||+.+... ..+..+..+.+ .+.++.+ |+.........+||||||||++|||||+.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 99999999886 599999974211 12222222211 2233333 44444555667899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 501 DPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 501 ~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+|++|||||||++||+.++..+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999999874 4899999999999986 599999999999999999999865
No 418
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-40 Score=369.34 Aligned_cols=212 Identities=27% Similarity=0.423 Sum_probs=183.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC--------CceEEECCeecCCCCH
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPL--------KGSVFMDEQDIRNYNL 1080 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~--------~G~I~idG~di~~i~~ 1080 (1255)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999953 46999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhcceEEEccCCC-CCcccHHHHHhcCCC-C------CC---HHHHHHHHHHhcHHHHHHccccccccccCCCCCCCC
Q 000846 1081 KQLRSHIALVSQEPT-LFAGTIRENIAYGKA-D------AR---ESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLS 1149 (1255)
Q Consensus 1081 ~~lR~~i~~V~Qdp~-LF~gTIreNl~~g~~-~------~~---~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LS 1149 (1255)
..+|+.++|+||++. +|..|++||+.++.. . .+ .+.+.++++.. |+++.++....+||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA-----------GATALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc-----------CcHhhhcCCcccCC
Confidence 888889999999986 678899999987531 1 01 11233333333 44455566678899
Q ss_pred hHHHHHHHHHHHHc---------cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEE
Q 000846 1150 GGQKQRIALARAIL---------KNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAV 1217 (1255)
Q Consensus 1150 gGQkQrlalARALl---------r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~V 1217 (1255)
||||||++|||||+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+. .||++++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998753 789999999999986 5999999
Q ss_pred EeCCEEEEecCHHHHHh
Q 000846 1218 IKNGRVVEQGSHNELVA 1234 (1255)
Q Consensus 1218 l~~G~ive~G~~~eLl~ 1234 (1255)
|++|++++.|+++++++
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999999865
No 419
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-40 Score=378.82 Aligned_cols=226 Identities=20% Similarity=0.329 Sum_probs=185.3
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC----CCCceEEECCeecCCCCHHHH
Q 000846 1009 IELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD----PLKGSVFMDEQDIRNYNLKQL 1083 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~----p~~G~I~idG~di~~i~~~~l 1083 (1255)
|+++|++++|+.+. +..+|+||||+|++||++||||+||||||||+++|+|+.+ |++|+|.+||.++.+++...+
T Consensus 4 L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (330)
T PRK15093 4 LDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRER 83 (330)
T ss_pred EEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 89999999996421 2469999999999999999999999999999999999986 589999999999998887655
Q ss_pred h----cceEEEccCCC--CC-cccHHHHHhcCCC----------C--CCHHHHHHHHHHhcHHHHHHccccccccccCCC
Q 000846 1084 R----SHIALVSQEPT--LF-AGTIRENIAYGKA----------D--ARESEIKKAAVLANAHEFISGMKDGYDTYCGER 1144 (1255)
Q Consensus 1084 R----~~i~~V~Qdp~--LF-~gTIreNl~~g~~----------~--~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~ 1144 (1255)
+ ++|+||||+|. ++ ..||.+|+..... . ...+++.++++..++.+.- ......
T Consensus 84 ~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~~~~~ 155 (330)
T PRK15093 84 RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHK--------DAMRSF 155 (330)
T ss_pred HHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChH--------HHHhCC
Confidence 3 47999999996 33 3589999853210 0 0123344555555553210 112344
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCC
Q 000846 1145 GVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNG 1221 (1255)
Q Consensus 1145 G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G 1221 (1255)
..+||||||||++|||||+.+|+|||||||||+||+.+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 568999999999999999999999999999999999999999999998763 7999999999999965 9999999999
Q ss_pred EEEEecCHHHHHhhhcCchhHH
Q 000846 1222 RVVEQGSHNELVALSRGGAYYS 1243 (1255)
Q Consensus 1222 ~ive~G~~~eLl~~~~~g~y~~ 1243 (1255)
+|+|.|+++++++. +...|.+
T Consensus 236 ~ive~g~~~~i~~~-p~~~y~~ 256 (330)
T PRK15093 236 QTVETAPSKELVTT-PHHPYTQ 256 (330)
T ss_pred EEEEECCHHHHHhC-CCCHHHH
Confidence 99999999999875 5566765
No 420
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.5e-40 Score=379.97 Aligned_cols=217 Identities=28% Similarity=0.480 Sum_probs=182.3
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++...+ ...++.|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 5999999999973 35999999999999999999999999999999999999999999999999987654 4678899
Q ss_pred EEeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhcc
Q 000846 424 GLVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIR 500 (1255)
Q Consensus 424 ~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~ 500 (1255)
||+||++.++. .|++||+.+... .....+..+. +.++++.+ |++........+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~--~L~~~~~~~~~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFA--RLESKADARVSDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchhhCCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999875 599999975221 1122222211 12233322 44444455567899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 501 DPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 501 ~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
+|++|||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999875 4899999999999986 4999999999999999999998753
No 421
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.1e-40 Score=378.63 Aligned_cols=229 Identities=26% Similarity=0.465 Sum_probs=185.1
Q ss_pred eEEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCC---ccEEEECCeecCCCCHHHH
Q 000846 344 EIEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPV---EGEVLLDGYKIRRLHLKWL 419 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~ 419 (1255)
-++++|++++|+... ...+|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.+||.++..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 589999999996422 246999999999999999999999999999999999999996 9999999999998876654
Q ss_pred ---h-cccEEeccCC--ccCcc-cHHHHhccCC---CCCCHHHHHHHHHHhchHHHHh--cCCCcccchhcCCCCCCChH
Q 000846 420 ---R-SQMGLVNQEP--VLFAT-SITENILFGK---DGASMDDVISAAKAANAHDFIT--KLPDGYETQVGQLGFQMSGG 487 (1255)
Q Consensus 420 ---r-~~i~~v~Q~~--~l~~~-ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~--~l~~g~~t~~~~~g~~LSgG 487 (1255)
| ++|+||+|+| .+++. |+.+|+.... ...+.++..+. +.+.++ .+|++. ..++..+.+||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~-----~~~~L~~vgL~~~~-~~~~~~p~~LSgG 165 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEE-----SVRMLDAVKMPEAR-KRMKMYPHEFSGG 165 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCCChH-HHhcCCcccCCHH
Confidence 3 4799999999 45553 8888775321 11222222111 112222 234332 3357788999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecC
Q 000846 488 QKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGS 564 (1255)
Q Consensus 488 qrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~ 564 (1255)
||||++|||||+.+|++||+|||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+. .||+|+||++|+|+|.|+
T Consensus 166 ~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~ 245 (330)
T PRK09473 166 MRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGN 245 (330)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999998854 899999999999986 599999999999999999
Q ss_pred hhHHhccCCCChhHH
Q 000846 565 HNELMNRGEGGEYYQ 579 (1255)
Q Consensus 565 ~~~l~~~~~~~~~~~ 579 (1255)
++++.+++. ..|.+
T Consensus 246 ~~~i~~~p~-~pyt~ 259 (330)
T PRK09473 246 ARDVFYQPS-HPYSI 259 (330)
T ss_pred HHHHHhCCC-CHHHH
Confidence 999987643 33443
No 422
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-40 Score=337.75 Aligned_cols=219 Identities=30% Similarity=0.468 Sum_probs=187.2
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHH-Hhcce
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQ-LRSHI 1087 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~-lR~~i 1087 (1255)
++++|++..|.. ..+|++|||++++||.++++||||+||||++++|+|+.+|.+|+|.++|.||...+++. .|..|
T Consensus 4 L~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 4 LEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred eeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 789999999963 46999999999999999999999999999999999999999999999999999999876 58889
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 000846 1088 ALVSQEPTLFA-GTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNP 1166 (1255)
Q Consensus 1088 ~~V~Qdp~LF~-gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p 1166 (1255)
+||||...+|. -||.|||.+|.-...+++-++ ..+++.-+-+| -|.......+.+|||||+|.+||||||+.+|
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~P 155 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----RDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSRP 155 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhccccccccc----ccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcCC
Confidence 99999999997 599999987742212111111 01222223344 3555566778899999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1167 SILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQ-KSDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1167 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
++|+|||||.+|-|.--+.|.++|+++.+ +.||++|-++..... -+||.+||++|+|+..|+.+||.++
T Consensus 156 klLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 156 KLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 99999999999999999999999999874 569999999999875 5999999999999999999999874
No 423
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.2e-40 Score=363.18 Aligned_cols=214 Identities=25% Similarity=0.422 Sum_probs=171.8
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC---CCCceEEECCeecCCCCHHHHh
Q 000846 1009 IELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD---PLKGSVFMDEQDIRNYNLKQLR 1084 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~lR 1084 (1255)
++|+||+|+|++.. .+++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999998542 3579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cceEEEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHH-HHHccccccccccCCCCCCCChHHHHHHHHHHHH
Q 000846 1085 SHIALVSQEPTLFAG-TIRENIAYGKADARESEIKKAAVLANAHE-FISGMKDGYDTYCGERGVQLSGGQKQRIALARAI 1162 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~g-TIreNl~~g~~~~~~~ei~~al~~a~l~~-~i~~lp~gldt~vge~G~~LSgGQkQrlalARAL 1162 (1255)
++++|+||++.+|.+ |++||+.++..........++......++ .+..+ +++........+||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999987 99999986421110000001111111111 22221 333333445678999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCc-hhh-hhcCEEEEEeCCEEEEec
Q 000846 1163 LKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRL-STI-QKSDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1163 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl-~ti-~~~D~I~Vl~~G~ive~G 1227 (1255)
+++|+||||||||++||+.+.+.+.+.|++.. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999875 478999999998 355 569999999999999876
No 424
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.4e-40 Score=359.89 Aligned_cols=207 Identities=29% Similarity=0.513 Sum_probs=173.7
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999974 3599999999999999999999999999999999999999999999999998765432 46899
Q ss_pred EeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 425 LVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 425 ~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
|++|++.+|. .|++||+.++.. ....++..+ .+.+.++.+ |++........+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~ 148 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVRE 148 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999986 599999987532 112222111 122334444 555555666789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESG 563 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g 563 (1255)
|+++||||||++||+++.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 149 PKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999874 38999999999998865 9999999999999875
No 425
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-40 Score=382.41 Aligned_cols=210 Identities=29% Similarity=0.449 Sum_probs=181.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCC----CHHHHh
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNY----NLKQLR 1084 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~lR 1084 (1255)
|++ |++++|++ . .+ |+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +....|
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999953 2 23 89999999999999999999999999999999999999999999998653 244568
Q ss_pred cceEEEccCCCCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHc
Q 000846 1085 SHIALVSQEPTLFA-GTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAIL 1163 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~-gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALl 1163 (1255)
++++||||++.+|. .|++||+.++......+++.+.++..++.++. .....+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLL-----------DRYPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHHHHHHHHHH
Confidence 89999999999996 59999999875433445566666666554433 3345689999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1164 KNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1164 r~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
++|++||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~ 219 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWAS 219 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhC
Confidence 99999999999999999999999999998754 7899999999998865 999999999999999999999875
No 426
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.1e-40 Score=364.73 Aligned_cols=212 Identities=30% Similarity=0.498 Sum_probs=179.9
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH-Hhccc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW-LRSQM 423 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 423 (1255)
|+++||++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999973 36999999999999999999999999999999999999999999999999998776544 46789
Q ss_pred EEeccCCccCcc-cHHHHhccCCCCC--CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhcc
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDGA--SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIR 500 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~ 500 (1255)
+|++|++.+|.. |++||+.++.... ..++. ..+.+..+ ++++........+||||||||++||||+++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~--------~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKI--------PDEIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHH--------HHHHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 9999998754221 11111 11222222 123444566778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 000846 501 DPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 501 ~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l 568 (1255)
+|+++||||||++||+.+++.+.+.|.++.+ ++|+|++||+++.+.. ||+|+++++|++++.|+++++
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999999999988753 7999999999999875 999999999999999999887
No 427
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-40 Score=366.79 Aligned_cols=218 Identities=28% Similarity=0.469 Sum_probs=184.1
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCC--CCH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRR--LHL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 416 (1255)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 5899999999963 359999999999999999999999999999999999986 489999999998853 345
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCCCC--C---HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKDGA--S---MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQR 491 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqr 491 (1255)
..++++++|++|++.+|+.|++||+.++.... . .+++.++++.+++.+.+ +...+..+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEV-------KDKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhH-------HHHhcCCcccCCHHHHHH
Confidence 67788999999999999889999998764211 1 12233333444433322 223466778999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEe---------CCEEEE
Q 000846 492 IAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLK---------AGKVVE 561 (1255)
Q Consensus 492 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~---------~G~i~~ 561 (1255)
++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 9999999999999999999999999999999999998877789999999999885 599999998 899999
Q ss_pred ecChhHHhcc
Q 000846 562 SGSHNELMNR 571 (1255)
Q Consensus 562 ~g~~~~l~~~ 571 (1255)
.|+++++.+.
T Consensus 240 ~~~~~~~~~~ 249 (264)
T PRK14243 240 FDRTEKIFNS 249 (264)
T ss_pred eCCHHHHHhC
Confidence 9999999764
No 428
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.7e-40 Score=357.11 Aligned_cols=202 Identities=32% Similarity=0.544 Sum_probs=174.3
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
++++||+++|+. .++|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ .+|+.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999952 468999999999999999999999999999999999999999999999987643 4678899
Q ss_pred EEccCCCCCcc-cHHHHHhcCC-CC-----CCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGK-AD-----ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~-~~-----~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
||||+|.+|.+ |++||+.++. +. ..++++.++++..++.+..... ..+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRL-----------PEQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCC-----------cccCCHHHHHHHHHHHH
Confidence 99999999874 9999997642 11 1234556666666665554443 34799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGS 1228 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~ 1228 (1255)
++++|+|+||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998753 7899999999999865 99999999999999875
No 429
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3e-40 Score=367.06 Aligned_cols=216 Identities=23% Similarity=0.370 Sum_probs=175.4
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc--cCCCCceEEECCeecCCCCHHHH-hc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERF--YDPLKGSVFMDEQDIRNYNLKQL-RS 1085 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl--~~p~~G~I~idG~di~~i~~~~l-R~ 1085 (1255)
|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+ ++|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999963 4699999999999999999999999999999999999 47999999999999988877664 45
Q ss_pred ceEEEccCCCCCcc-cHHHHHhcCCCC---------CCHHHHHHHHHHhcHHHHHHccccccccc-cCCCCC-CCChHHH
Q 000846 1086 HIALVSQEPTLFAG-TIRENIAYGKAD---------ARESEIKKAAVLANAHEFISGMKDGYDTY-CGERGV-QLSGGQK 1153 (1255)
Q Consensus 1086 ~i~~V~Qdp~LF~g-TIreNl~~g~~~---------~~~~ei~~al~~a~l~~~i~~lp~gldt~-vge~G~-~LSgGQk 1153 (1255)
.++||||+|.+|.+ |++||+.+.... .+.++.. ..+.+.+..+ |++.. ...... .||||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~ 150 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL-----KLLKAKLALL--GMDEEFLNRSVNEGFSGGEK 150 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH-----HHHHHHHHHc--CCchhhcccccccCcCHHHH
Confidence 69999999998875 899999653210 0111111 1122222222 23211 122233 5999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh--cCEEEEEeCCEEEEecCHH
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK--SDTIAVIKNGRVVEQGSHN 1230 (1255)
Q Consensus 1154 QrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~--~D~I~Vl~~G~ive~G~~~ 1230 (1255)
||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 151 KRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999999875 47899999999999976 7999999999999999998
Q ss_pred HHHh
Q 000846 1231 ELVA 1234 (1255)
Q Consensus 1231 eLl~ 1234 (1255)
++-.
T Consensus 231 ~~~~ 234 (243)
T TIGR01978 231 LAKE 234 (243)
T ss_pred Hhcc
Confidence 7643
No 430
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-40 Score=362.33 Aligned_cols=209 Identities=33% Similarity=0.518 Sum_probs=173.5
Q ss_pred EEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 345 IEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 345 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
|+++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 46899999997411 1469999999999999999999999999999999999999999999999998863 35789
Q ss_pred EEeccCCccCc-ccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhcc
Q 000846 424 GLVNQEPVLFA-TSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIR 500 (1255)
Q Consensus 424 ~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~ 500 (1255)
+||+|+|.+|. .|++||+.++.. ....++. ...+.+.++.+ |++........+||||||||++|||||+.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEA-----RERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999987 599999987532 1111111 11223344444 55555566667999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEe--CCEEEEecCh
Q 000846 501 DPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLK--AGKVVESGSH 565 (1255)
Q Consensus 501 ~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~--~G~i~~~g~~ 565 (1255)
+|+++||||||++||+.++..+.+.|+++. .|+|+|++||+++.+. .||++++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999998873 3799999999999875 599999999 7999998764
No 431
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-40 Score=364.62 Aligned_cols=204 Identities=33% Similarity=0.490 Sum_probs=175.1
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 5999999999963 35999999999999999999999999999999999999999999999998753 457789
Q ss_pred EEeccCCccCc-ccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCC
Q 000846 424 GLVNQEPVLFA-TSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDP 502 (1255)
Q Consensus 424 ~~v~Q~~~l~~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~ 502 (1255)
+|++|++.+|+ .|++||+.++......+++.++ ++.+ |+.........+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~---------l~~~--gl~~~~~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQA---------LAAV--GLADRANEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHH---------HHHc--CChhHhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 5999999876432112233333 3333 4544556667899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChh
Q 000846 503 KILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHN 566 (1255)
Q Consensus 503 ~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~ 566 (1255)
++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .||+|++|++|+++++|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998873 3799999999999875 59999999999999988754
No 432
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=366.83 Aligned_cols=221 Identities=26% Similarity=0.449 Sum_probs=184.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCC--CCH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRR--LHL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 416 (1255)
.++++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999973 359999999999999999999999999999999999987 699999999999853 345
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcC--CCcccchhcCCCCCCChHHHHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKD--GASMDDVISAAKAANAHDFITKL--PDGYETQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqrqri 492 (1255)
..++++++|++|+|.+|..|++||+.++.. ...+++..+ ..+.+.+..+ .+++.......+.+||||||||+
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv 176 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLD----EIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRL 176 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHH----HHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHH
Confidence 567889999999999998999999987531 111111111 0111112211 12344456677889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 177 ~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~~ 256 (271)
T PRK14238 177 CIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFSN 256 (271)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 999999999999999999999999999999999999877899999999999986 5999999999999999999998764
No 433
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.1e-40 Score=363.36 Aligned_cols=213 Identities=32% Similarity=0.518 Sum_probs=175.8
Q ss_pred EEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH---HHHh
Q 000846 345 IEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL---KWLR 420 (1255)
Q Consensus 345 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~r 420 (1255)
|+++||+++|++.. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996421 1269999999999999999999999999999999999999999999999999987763 5678
Q ss_pred cccEEeccCC--ccC-cccHHHHhccCCCC---CCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCCCCChHHHHHHH
Q 000846 421 SQMGLVNQEP--VLF-ATSITENILFGKDG---ASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGFQMSGGQKQRIA 493 (1255)
Q Consensus 421 ~~i~~v~Q~~--~l~-~~ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqrqri~ 493 (1255)
++++|++|+| .++ ..|++||+.++... ...++..+.+ +.+.+..+ |+. ........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHHH
Confidence 8999999999 344 46999999764211 1111111100 12344444 553 4567778899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 000846 494 IARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESG 563 (1255)
Q Consensus 494 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g 563 (1255)
|||||+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998753 899999999999987 59999999999998765
No 434
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-40 Score=367.28 Aligned_cols=213 Identities=26% Similarity=0.428 Sum_probs=183.5
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..++++.+
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (255)
T PRK11231 2 TLRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRL 78 (255)
T ss_pred EEEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhhe
Confidence 3789999999973 4699999999999999999999999999999999999999999999999999887777888899
Q ss_pred EEeccCCccCcc-cHHHHhccCCCCC-------C---HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHH
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDGA-------S---MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~~-------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri 492 (1255)
+|++|++.++.+ |+.||+.++.... . .+++.++ +..+ |++.........||||||||+
T Consensus 79 ~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~~--~l~~~~~~~~~~LS~G~~qrv 147 (255)
T PRK11231 79 ALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQA---------MEQT--RINHLADRRLTDLSGGQRQRA 147 (255)
T ss_pred EEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHH---------HHHc--CCHHHHcCCcccCCHHHHHHH
Confidence 999999998876 9999998763210 1 1122222 3332 444445566789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+||||++.+|++|||||||++||+++.+.+.+.|+++. +|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 148 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 148 FLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 99999999999999999999999999999999998875 4899999999999985 599999999999999999988864
No 435
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.9e-40 Score=366.66 Aligned_cols=226 Identities=26% Similarity=0.397 Sum_probs=184.2
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC----CCceEEECCeecCCCCHHHH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDP----LKGSVFMDEQDIRNYNLKQL 1083 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p----~~G~I~idG~di~~i~~~~l 1083 (1255)
.|+++||+++| + .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 48999999999 2 3599999999999999999999999999999999999999 999999999998632 223
Q ss_pred hcceEEEccCCC-CCc--ccHHHHHhcC----CCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHH
Q 000846 1084 RSHIALVSQEPT-LFA--GTIRENIAYG----KADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRI 1156 (1255)
Q Consensus 1084 R~~i~~V~Qdp~-LF~--gTIreNl~~g----~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrl 1156 (1255)
++.|+||||+|. .|. .|+.+|+.+. .....++++.++++..++.++ ++.++....+||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 467999999985 443 5888887431 112233455566665554321 1234556778999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHH
Q 000846 1157 ALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1157 alARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl 1233 (1255)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.+ ||++++|++|++++.|++++++
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999864 9999999999999999999998
Q ss_pred hhhcCc-hhHHHHhhh
Q 000846 1234 ALSRGG-AYYSLIKPQ 1248 (1255)
Q Consensus 1234 ~~~~~g-~y~~l~~~~ 1248 (1255)
+. +.. .++.++..+
T Consensus 230 ~~-~~~~~~~~~~~~~ 244 (254)
T PRK10418 230 NA-PKHAVTRSLVSAH 244 (254)
T ss_pred hC-CCCHHHHHHHHhh
Confidence 64 333 444455544
No 436
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-40 Score=368.67 Aligned_cols=219 Identities=29% Similarity=0.494 Sum_probs=184.8
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999743 24599999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEeccCCc-cC-cccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 424 GLVNQEPV-LF-ATSITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 424 ~~v~Q~~~-l~-~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
+|++|+|. +| ..|+++|+.++... ...++..+ .+.+.++.+ |+.........+||||||||++||||++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQV--DMLERADYEPNALSGGQKQRVAIAGVLA 158 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999995 44 45899999876421 12222111 112223333 4444455667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRTANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
.+|+++||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 159 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 231 (269)
T PRK13648 159 LNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFD 231 (269)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999988743 799999999999987799999999999999999999865
No 437
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.3e-40 Score=375.96 Aligned_cols=215 Identities=25% Similarity=0.441 Sum_probs=186.4
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +...+++++|
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 459999999999999999999999999999999999999999999999999876 3456788999
Q ss_pred EeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 425 LVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
|+||+|.+|.. |++||+.+... ....++..+ .+++.+..+ |++........+||||||||++|||||+++
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 99999975321 111122111 123445555 676667777889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|++|||||||++||+.+.+.+++.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 9999999999999999999999999998778999999999998865 99999999999999999999865
No 438
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=367.87 Aligned_cols=217 Identities=28% Similarity=0.520 Sum_probs=180.8
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCCCC--HH
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRRLH--LK 417 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~~~--~~ 417 (1255)
-+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 478999999963 469999999999999999999999999999999999986 47999999999886543 33
Q ss_pred HHhcccEEeccCCccCcccHHHHhccCCC--CC--CH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 418 WLRSQMGLVNQEPVLFATSITENILFGKD--GA--SM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 418 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
.+|++++|++|++.+|+.|++||+.++.. .. .. +++.++++..++.+. +.+.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEE-------LGDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCch-------hhhHhhcChhhCCHHHH
Confidence 56889999999999998999999987521 11 11 112222232222111 12345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++||||++++|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877899999999999986 5999999999999999999998
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
.+.
T Consensus 236 ~~~ 238 (251)
T PRK14244 236 FKN 238 (251)
T ss_pred hcC
Confidence 764
No 439
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-40 Score=366.93 Aligned_cols=222 Identities=25% Similarity=0.429 Sum_probs=187.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH-Hhcc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW-LRSQ 422 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 422 (1255)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 46999999999999999999999999999999999999999999999999998776544 3556
Q ss_pred cEEeccCCccCcc-cHHHHhccCCCCCCH----------HHH--HHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 423 MGLVNQEPVLFAT-SITENILFGKDGASM----------DDV--ISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 423 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~----------~~~--~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
++|++|+|.+|.. |++||+.++...... ... ........+.++++.+ |++........+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 9999999999986 999999975321000 000 0001112234556666 777778888899999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChh
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHN 566 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~ 566 (1255)
||++||||++.+|++|||||||++||+.+.+.+.+.|.++.+ |+|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 999999999999999999999999999999999999988743 7899999999999854 9999999999999999998
Q ss_pred HHhc
Q 000846 567 ELMN 570 (1255)
Q Consensus 567 ~l~~ 570 (1255)
++..
T Consensus 240 ~~~~ 243 (255)
T PRK11300 240 EIRN 243 (255)
T ss_pred HHhh
Confidence 8764
No 440
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6.1e-40 Score=368.02 Aligned_cols=231 Identities=32% Similarity=0.506 Sum_probs=188.8
Q ss_pred EEEEEEEEECCCC------CCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCH--
Q 000846 1009 IELKNVFFAYPTR------PDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNL-- 1080 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~------~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~-- 1080 (1255)
|+++||+++|+.. .++++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 8999999999631 13569999999999999999999999999999999999999999999999999988765
Q ss_pred -HHHhcceEEEccCCC--CC-cccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHcccccccc-ccCCCCCCCChHHHHH
Q 000846 1081 -KQLRSHIALVSQEPT--LF-AGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDT-YCGERGVQLSGGQKQR 1155 (1255)
Q Consensus 1081 -~~lR~~i~~V~Qdp~--LF-~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt-~vge~G~~LSgGQkQr 1155 (1255)
..+|+.++|+||++. ++ ..|+++|+.+...... .+..+.....+.+.+..+ |+++ ........||||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge~qr 159 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLL--SLDKAERLARASEMLRAV--DLDDSVLDKRPPQLSGGQLQR 159 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhc--cCCHHHHHHHHHHHHHHc--CCChhHhhCCCccCChHHHHH
Confidence 347889999999983 44 4699999864211000 000111222344555544 5653 4566778999999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHH
Q 000846 1156 IALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNEL 1232 (1255)
Q Consensus 1156 lalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eL 1232 (1255)
++|||||+.+|+||||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 160 l~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 239 (268)
T PRK10419 160 VCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDK 239 (268)
T ss_pred HHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhc
Confidence 9999999999999999999999999999999999998753 7899999999999975 999999999999999999999
Q ss_pred HhhhcCchhHHHH
Q 000846 1233 VALSRGGAYYSLI 1245 (1255)
Q Consensus 1233 l~~~~~g~y~~l~ 1245 (1255)
... ++.|..-+
T Consensus 240 ~~~--~~~~~~~~ 250 (268)
T PRK10419 240 LTF--SSPAGRVL 250 (268)
T ss_pred cCC--CCHHHHHH
Confidence 864 55555443
No 441
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-40 Score=364.74 Aligned_cols=218 Identities=31% Similarity=0.470 Sum_probs=183.4
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCCC--CH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRRL--HL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 416 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 3599999999999999999999999999999999999875 799999999998653 34
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCCC--C-CH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKDG--A-SM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
...++.++|++|++.+|+.|++||+.++... . .. +++.++++..++.+ ++..........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWD-------EVKDDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCch-------hhhhHhhCCcccCCHHHH
Confidence 5678899999999999999999999875321 1 11 12223333333211 222345567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777999999999999864 999999999999999999998
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
...
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 764
No 442
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-40 Score=366.24 Aligned_cols=218 Identities=32% Similarity=0.482 Sum_probs=181.6
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCC--CCH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRR--LHL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 416 (1255)
.|+++|++|+|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 359999999999999999999999999999999999997 479999999999854 344
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCCC--CC-HH----HHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKDG--AS-MD----DVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~-~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
..+++.++|++|++.+|+.|++||+.++... .. .+ ++.++++..++++ .........+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWK-------ETKDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCc-------chHHHhccChhhCCHHHH
Confidence 5678899999999999999999999875321 11 11 1222222222210 112334567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++||||++++|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999754 999999999999999999998
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
...
T Consensus 234 ~~~ 236 (251)
T PRK14251 234 FIA 236 (251)
T ss_pred HhC
Confidence 754
No 443
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=363.70 Aligned_cols=217 Identities=27% Similarity=0.415 Sum_probs=183.5
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++++
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 3789999999973 3599999999999999999999999999999999999999999999999999887777778899
Q ss_pred EEeccCCcc-CcccHHHHhccCCCCC--CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc-
Q 000846 424 GLVNQEPVL-FATSITENILFGKDGA--SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI- 499 (1255)
Q Consensus 424 ~~v~Q~~~l-~~~ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~- 499 (1255)
+|++|++.+ +..|++||+.++.... ..++.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGe~qrv~la~al~~ 151 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDD-----ALVAAALAQV--DLAHLAGRDYPQLSGGEQQRVQLARVLAQ 151 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHH-----HHHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 999999987 5669999998753211 111110 1112333333 4554556667899999999999999999
Q ss_pred -----cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 500 -----RDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 500 -----~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 152 ~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 152 LWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred ccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999999999875 4899999999999986 599999999999999999988864
No 444
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.5e-40 Score=358.96 Aligned_cols=201 Identities=31% Similarity=0.539 Sum_probs=169.2
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH---HHhc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK---WLRS 421 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~r~ 421 (1255)
|+++|++++|+. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999876543 4678
Q ss_pred ccEEeccCCccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHH
Q 000846 422 QMGLVNQEPVLFA-TSITENILFGKD--GAS----MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAI 494 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~l 494 (1255)
.++|++|+|.+|. .|++||+.++.. ... .+++.++++..+ +.........+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVG-----------LEHKADAFPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------ChhhhhCChhhCCHHHHHHHHH
Confidence 8999999999986 599999987521 111 122333333333 3333344456899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCE
Q 000846 495 ARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGK 558 (1255)
Q Consensus 495 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~ 558 (1255)
||||+.+|++|||||||++||+.++..+.+.|+++. +|+|+|++||+++.+.. ||++++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999874 48999999999999875 99999999985
No 445
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.6e-40 Score=367.59 Aligned_cols=222 Identities=24% Similarity=0.396 Sum_probs=183.2
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCeecCCC-----C
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPL---KGSVFMDEQDIRNY-----N 1079 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~idG~di~~i-----~ 1079 (1255)
-|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 46999999999999999999999999999999999999986 49999999998653 3
Q ss_pred HHHHhcceEEEccCCCCCc-ccHHHHHhcCCCCC--------------CHHHHHHHHHHhcHHHHHHccccccccccCCC
Q 000846 1080 LKQLRSHIALVSQEPTLFA-GTIRENIAYGKADA--------------RESEIKKAAVLANAHEFISGMKDGYDTYCGER 1144 (1255)
Q Consensus 1080 ~~~lR~~i~~V~Qdp~LF~-gTIreNl~~g~~~~--------------~~~ei~~al~~a~l~~~i~~lp~gldt~vge~ 1144 (1255)
...+|++++|+||++.+|. .|++||+.++.... ..+++.++++..++.+ .....
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVH-----------FAHQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHH-----------HHhCC
Confidence 4567889999999999887 59999998753210 1123333444444332 23345
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCC
Q 000846 1145 GVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQ-KSDTIAVIKNG 1221 (1255)
Q Consensus 1145 G~~LSgGQkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G 1221 (1255)
..+||||||||++||||++.+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 56799999999999999999999999999999999999999999999875 3799999999999864 59999999999
Q ss_pred EEEEecCHHHHHhhhcCchhHHHHhh
Q 000846 1222 RVVEQGSHNELVALSRGGAYYSLIKP 1247 (1255)
Q Consensus 1222 ~ive~G~~~eLl~~~~~g~y~~l~~~ 1247 (1255)
++++.|+++++ . .....+++..
T Consensus 230 ~i~~~g~~~~~-~---~~~~~~~~~~ 251 (262)
T PRK09984 230 HVFYDGSSQQF-D---NERFDHLYRS 251 (262)
T ss_pred EEEEeCCHHHh-c---cHHHHHHHhh
Confidence 99999999997 2 2344555543
No 446
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-40 Score=364.68 Aligned_cols=217 Identities=29% Similarity=0.515 Sum_probs=183.3
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecC------CCCHH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIR------RLHLK 417 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~------~~~~~ 417 (1255)
.++++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .....
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 3789999999963 35999999999999999999999999999999999999999999999999873 12345
Q ss_pred HHhcccEEeccCCccCcc-cHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHH
Q 000846 418 WLRSQMGLVNQEPVLFAT-SITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIA 493 (1255)
Q Consensus 418 ~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~ 493 (1255)
.+|++++|++|++.+|.+ |++||+.++.. ....++.. ..+.+.++.+ |++........+||||||||++
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~ 151 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVA 151 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHH
Confidence 678899999999999975 99999974211 11111111 1234455555 6666677777899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 494 IARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 494 lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
||||++.+|+++||||||++||+++...+.+.|+++. +|+|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 152 laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 152 IARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 9999999999999999999999999999999999875 4899999999999986 499999999999999999887643
No 447
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3e-40 Score=358.65 Aligned_cols=205 Identities=38% Similarity=0.639 Sum_probs=172.4
Q ss_pred EEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEE
Q 000846 346 EFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGL 425 (1255)
Q Consensus 346 ~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 425 (1255)
+++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999742 1469999999999999999999999999999999999999999999999999987777778889999
Q ss_pred eccCCc--cCcccHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 426 VNQEPV--LFATSITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 426 v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
++|++. ++..|++||+.++... ....+..+ .+.+.++.+ |++........+||||||||++|||||+++
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999984 5678999999875321 11111111 123344444 555556667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCE
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGK 558 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~ 558 (1255)
|++|||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|+
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999998875 48999999999999876 99999999984
No 448
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.3e-40 Score=371.53 Aligned_cols=213 Identities=33% Similarity=0.562 Sum_probs=182.8
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.++++|++++|+. +..+|+||||+|++|+++|++||||||||||+++|+|++.|++|+|.++|.+...- ....+++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999973 24699999999999999999999999999999999999999999999999998765 66788899
Q ss_pred EEeccCCccCcc-cHHHHhccCCC-----C-CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 424 GLVNQEPVLFAT-SITENILFGKD-----G-ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~-----~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
||+||+|.+++. |++||+.|... . ...+.+.+.++.. |++........+||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~-----------~L~~~~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELF-----------GLEDKANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHc-----------CCchhhCcchhhcCHHHHHHHHHHH
Confidence 999999998876 99999987321 1 1122343344333 3333224556799999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-C-CeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK-G-RTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~-~-~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
||+.+|++|||||||++|||.++..+.+.|+++.+ | +||+++||.++.+.. ||+|++|++|+++.+|+++++..
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~ 226 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKE 226 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999865 5 799999999999976 99999999999999999998765
No 449
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=367.00 Aligned_cols=216 Identities=31% Similarity=0.484 Sum_probs=179.7
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecC--CCCHHHHhcc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIR--RLHLKWLRSQ 422 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~--~~~~~~~r~~ 422 (1255)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++. ..+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999963 35999999999999999999999999999999999999999999999999985 2344567889
Q ss_pred cEEeccCCc--cCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHh
Q 000846 423 MGLVNQEPV--LFATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARAL 498 (1255)
Q Consensus 423 i~~v~Q~~~--l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal 498 (1255)
++||+|+|. ++..|+.+|+.++.. ....++..+ .+.+.++.+ |++........+||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL 151 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITR-----RVDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGAL 151 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHH
Confidence 999999985 566799999987421 112222211 112233333 343334556679999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 499 IRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 499 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+.+|++|||||||++||+.++..+.+.|+++. +|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999998874 4899999999999985 599999999999999999998865
No 450
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=365.95 Aligned_cols=217 Identities=27% Similarity=0.411 Sum_probs=184.4
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcc
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQ 422 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~ 422 (1255)
..|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 36999999999973 359999999999999999999999999999999999999999999999999988887778889
Q ss_pred cEEeccCCccCc-ccHHHHhccCCCCC-------CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHH
Q 000846 423 MGLVNQEPVLFA-TSITENILFGKDGA-------SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAI 494 (1255)
Q Consensus 423 i~~v~Q~~~l~~-~ti~~ni~~~~~~~-------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~l 494 (1255)
++|++|++.+|. .|++||+.++.... .... ...+.+.++.+ |++......+.+||||||||++|
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~l 154 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED------EEAVTKAMQAT--GITHLADQSVDTLSGGQRQRAWI 154 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHH------HHHHHHHHHHc--CCHHHhcCCcccCChHHHHHHHH
Confidence 999999998875 59999998753110 1110 11122333333 44444566678999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 495 ARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 495 ARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|||++.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 155 aral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 155 AMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 9999999999999999999999999999999998743 789999999999875 599999999999999999988764
No 451
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=367.88 Aligned_cols=220 Identities=29% Similarity=0.506 Sum_probs=182.6
Q ss_pred cceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCC--C
Q 000846 342 RGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRR--L 414 (1255)
Q Consensus 342 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~--~ 414 (1255)
+..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .
T Consensus 37 ~~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~ 113 (285)
T PRK14254 37 ETVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADV 113 (285)
T ss_pred CceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcccccc
Confidence 346999999999963 359999999999999999999999999999999999997 689999999999864 3
Q ss_pred CHHHHhcccEEeccCCccCcccHHHHhccCCCC--CC---HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 415 HLKWLRSQMGLVNQEPVLFATSITENILFGKDG--AS---MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 415 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
+...++++++|++|++.+|..|++||+.++... .. .+++.++++..++.+ .+....+..+.+||||||
T Consensus 114 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LSgGe~ 186 (285)
T PRK14254 114 DPVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWD-------EVKDQLDSSGLDLSGGQQ 186 (285)
T ss_pred chHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCc-------hhHHHHhCCcccCCHHHH
Confidence 455678899999999999988999999865311 11 122233333322211 112345677789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEE-EEeCCEEEEecChhH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIM-VLKAGKVVESGSHNE 567 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~-vl~~G~i~~~g~~~~ 567 (1255)
||++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+++ +|++|++++.|++++
T Consensus 187 qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~ 266 (285)
T PRK14254 187 QRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDK 266 (285)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999998767899999999999865 99975 579999999999999
Q ss_pred Hhcc
Q 000846 568 LMNR 571 (1255)
Q Consensus 568 l~~~ 571 (1255)
+..+
T Consensus 267 ~~~~ 270 (285)
T PRK14254 267 IFEN 270 (285)
T ss_pred HHhC
Confidence 8754
No 452
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.2e-40 Score=375.69 Aligned_cols=200 Identities=24% Similarity=0.421 Sum_probs=171.3
Q ss_pred CccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceEEEccCCCCCcc-cHH
Q 000846 1024 QMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAG-TIR 1102 (1255)
Q Consensus 1024 ~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~g-TIr 1102 (1255)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. ....+|++|+|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999976 445678999999999999875 999
Q ss_pred HHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCC
Q 000846 1103 ENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATS 1176 (1255)
Q Consensus 1103 eNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ILlLDEaTS 1176 (1255)
||+.+... ..+. +++.++++..++. ........+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELG-----------EAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-----------hHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99976421 1121 2333444444332 22334456799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1177 ALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1177 aLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
+||+.+.+.+++.|++.. +|+|+|++||+++.+.+ ||+|++|++|++++.|+++++.+.
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999875 57999999999999875 999999999999999999999764
No 453
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=364.32 Aligned_cols=218 Identities=28% Similarity=0.475 Sum_probs=184.0
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCCC--CH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRRL--HL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 416 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 5899999999963 4599999999999999999999999999999999999763 489999999998765 44
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCCC--C-CHH----HHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKDG--A-SMD----DVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
...++.++|++|++.+|+.|++||+.++... . ... .+.++++..+ +.+++.+..+..+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAA-------LWDEVKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhc-------CchhhHHHhhcChhhCCHHHH
Confidence 5678899999999999989999999876321 1 111 1222222222 222334456778889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 999999999999999999999999999999999999998877799999999999986 5999999999999999999998
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
..+
T Consensus 236 ~~~ 238 (253)
T PRK14261 236 FEN 238 (253)
T ss_pred HhC
Confidence 754
No 454
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.3e-40 Score=360.11 Aligned_cols=211 Identities=27% Similarity=0.425 Sum_probs=181.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhccc
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQM 423 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i 423 (1255)
.|+++|+++.|++ .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 5999999999963 4599999999999999999999999999999999999999999999999999888877788899
Q ss_pred EEeccCCccCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCCCCChHHHHHHHHHHHhcc
Q 000846 424 GLVNQEPVLFATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGFQMSGGQKQRIAIARALIR 500 (1255)
Q Consensus 424 ~~v~Q~~~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqrqri~lARal~~ 500 (1255)
+|++|++.+|+.|++||+.++.. ....++ ..+.+.++.+ |+. +.....+.+||||||||++|||||++
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~-------~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDP-------AIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHH-------HHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999998899999986421 111110 1123445555 553 45677888999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhhcCEEEEEe-CCEEEEecChh
Q 000846 501 DPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRTANLIMVLK-AGKVVESGSHN 566 (1255)
Q Consensus 501 ~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~~d~i~vl~-~G~i~~~g~~~ 566 (1255)
+|+++||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+..||++++|+ ++..+++|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999999874 3889999999999998899999995 66677888775
No 455
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.1e-40 Score=357.82 Aligned_cols=206 Identities=32% Similarity=0.532 Sum_probs=171.4
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH---HHHhc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL---KWLRS 421 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~r~ 421 (1255)
|+++|++++|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ...|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4689999999642 359999999999999999999999999999999999999999999999999987654 34678
Q ss_pred ccEEeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHh
Q 000846 422 QMGLVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARAL 498 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal 498 (1255)
.++|++|+|.+|.. |++||+.++.. ....++..+ .+.+.++.+ |++........+||||||||++|||||
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 151 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELV--GLSHKHRALPAELSGGEQQRVAIARAI 151 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHH
Confidence 89999999999985 99999987532 112221111 112333333 444444555679999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEE
Q 000846 499 IRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKV 559 (1255)
Q Consensus 499 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i 559 (1255)
+.+|+++||||||++||+++++.+.+.|+++. +|+|+|++||+++.+.. ||++++|++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 152 VNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999874 58999999999999875 999999999974
No 456
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=366.91 Aligned_cols=220 Identities=29% Similarity=0.477 Sum_probs=185.7
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCCCC-HH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRRLH-LK 417 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~~-~~ 417 (1255)
.++++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999973 4699999999999999999999999999999999999986 7999999999987653 45
Q ss_pred HHhcccEEeccCCccCcccHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcC--CCcccchhcCCCCCCChHHHHHH
Q 000846 418 WLRSQMGLVNQEPVLFATSITENILFGKD---GASMDDVISAAKAANAHDFITKL--PDGYETQVGQLGFQMSGGQKQRI 492 (1255)
Q Consensus 418 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqrqri 492 (1255)
.++++++|++|+|.+|+.|++||+.++.. ..+.++..+.+ .+.+..+ +..+.+.....+.+||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl 172 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLL 172 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHH
Confidence 67889999999999999999999987532 12333322211 1222322 22223456677889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhcc
Q 000846 493 AIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 493 ~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
+|||||+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|+++++.+.
T Consensus 173 ~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 252 (276)
T PRK14271 173 CLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSS 252 (276)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999998866789999999999986 5999999999999999999999764
No 457
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-40 Score=342.86 Aligned_cols=220 Identities=30% Similarity=0.478 Sum_probs=191.2
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH-Hhccc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW-LRSQM 423 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 423 (1255)
++++|++++|++ ..+++||||++++||+++|+|||||||||++|+|+|+|+|++|+|.++|++|..+++.. .|..|
T Consensus 5 L~v~~l~k~FGG---l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 5 LEVRGLSKRFGG---LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred eeeccceeecCC---EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccc
Confidence 678999999974 46999999999999999999999999999999999999999999999999999998765 46689
Q ss_pred EEeccCCccCcc-cHHHHhccCCCCC-----------CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHH
Q 000846 424 GLVNQEPVLFAT-SITENILFGKDGA-----------SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQR 491 (1255)
Q Consensus 424 ~~v~Q~~~l~~~-ti~~ni~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqr 491 (1255)
+--+|.+.+|++ ||.||+..+.... ...+..++ ...+.+.++.+ |+....++...+||+|||.|
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~--~e~A~~~Le~v--gL~~~a~~~A~~LsyG~qR~ 157 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREA--RERARELLEFV--GLGELADRPAGNLSYGQQRR 157 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHH--HHHHHHHHHHc--CCchhhcchhhcCChhHhHH
Confidence 999999999987 9999998763211 00111111 12234555555 88888888899999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 000846 492 IAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 492 i~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l 568 (1255)
+.|||||..+|++|+||||.++|.+.....+.+.|+++++ |.|+++|.||++.+.. ||||+||+.|+++.+|+|+|+
T Consensus 158 LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV 237 (250)
T COG0411 158 LEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEV 237 (250)
T ss_pred HHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHH
Confidence 9999999999999999999999999999999999999875 5999999999999864 999999999999999999999
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
.++
T Consensus 238 ~~d 240 (250)
T COG0411 238 RNN 240 (250)
T ss_pred hcC
Confidence 875
No 458
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=362.66 Aligned_cols=218 Identities=29% Similarity=0.512 Sum_probs=183.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecC-CCCHH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIR-RLHLK 417 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~-~~~~~ 417 (1255)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999973 4599999999999999999999999999999999999986 5999999999985 34566
Q ss_pred HHhcccEEeccCCccCcccHHHHhccCCCC--CC-H----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHH
Q 000846 418 WLRSQMGLVNQEPVLFATSITENILFGKDG--AS-M----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQ 490 (1255)
Q Consensus 418 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~-~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrq 490 (1255)
.+|+.++|++|++.+|..|++||+.++... .. . +++.++++..++. +++.+.....+.+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALW-------DEVKDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCc-------hhhhHHhhcCcccCCHHHHH
Confidence 778899999999999989999999875321 11 1 1122223333222 12234456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000846 491 RIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELM 569 (1255)
Q Consensus 491 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 569 (1255)
|++|||||+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999865 9999999999999999998886
Q ss_pred cc
Q 000846 570 NR 571 (1255)
Q Consensus 570 ~~ 571 (1255)
.+
T Consensus 233 ~~ 234 (249)
T PRK14253 233 SN 234 (249)
T ss_pred cC
Confidence 53
No 459
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.5e-39 Score=364.89 Aligned_cols=232 Identities=22% Similarity=0.388 Sum_probs=185.2
Q ss_pred eEEEEeEEEEcCCC------CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH
Q 000846 344 EIEFRDVYFCYPSR------PDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK 417 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~------~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~ 417 (1255)
.|+++||+++|+.. .+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999998765555
Q ss_pred HHhcccEEeccCCc--cCcc-cHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCCCCChHHHH
Q 000846 418 WLRSQMGLVNQEPV--LFAT-SITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGFQMSGGQKQ 490 (1255)
Q Consensus 418 ~~r~~i~~v~Q~~~--l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGqrq 490 (1255)
..++.++|++|+|. ++.. |+.+|+.++.. .....+..+ .+.+.++.+ |++ ........+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G~~q 156 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREK-----QIIETLRQV--GLLPDHASYYPHMLAPGQKQ 156 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHc--CCChHHHhcCchhcCHHHHH
Confidence 66678999999985 4544 89999875321 111111111 112333333 332 2233455789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 000846 491 RIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNE 567 (1255)
Q Consensus 491 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~ 567 (1255)
|++||||++.+|+||||||||++||+++.+.+.+.|+++. .|+|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 157 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 236 (267)
T PRK15112 157 RLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTAD 236 (267)
T ss_pred HHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHH
Confidence 9999999999999999999999999999999999999874 38999999999999875 99999999999999999999
Q ss_pred HhccCCCChhHHHHH
Q 000846 568 LMNRGEGGEYYQMVE 582 (1255)
Q Consensus 568 l~~~~~~~~~~~~~~ 582 (1255)
+...+....+.+++.
T Consensus 237 ~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 237 VLASPLHELTKRLIA 251 (267)
T ss_pred HhcCCCCHHHHHHHH
Confidence 987543444555554
No 460
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=364.92 Aligned_cols=219 Identities=32% Similarity=0.497 Sum_probs=183.8
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCC--CC
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRR--LH 415 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 415 (1255)
+.|+++|++++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 36999999999963 3599999999999999999999999999999999999985 48999999998854 34
Q ss_pred HHHHhcccEEeccCCccCcccHHHHhccCCCC---CCH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHH
Q 000846 416 LKWLRSQMGLVNQEPVLFATSITENILFGKDG---ASM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQ 488 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 488 (1255)
...++++++|++|++.+|+.|++||+.++... ... +.+.++++..++.+.+ .......+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-------KDKLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHH
Confidence 56678899999999999999999999875311 111 1233344444433222 223456678999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEe-----CCEEEEe
Q 000846 489 KQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLK-----AGKVVES 562 (1255)
Q Consensus 489 rqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~-----~G~i~~~ 562 (1255)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 9999999999999999999999999999999999999998877899999999999986 599999998 5999999
Q ss_pred cChhHHhcc
Q 000846 563 GSHNELMNR 571 (1255)
Q Consensus 563 g~~~~l~~~ 571 (1255)
|+++++.+.
T Consensus 236 ~~~~~~~~~ 244 (259)
T PRK14260 236 GVTTQIFSN 244 (259)
T ss_pred CCHHHHhcC
Confidence 999998764
No 461
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.4e-39 Score=355.01 Aligned_cols=210 Identities=29% Similarity=0.473 Sum_probs=184.4
Q ss_pred EEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCH----HHHhc
Q 000846 346 EFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHL----KWLRS 421 (1255)
Q Consensus 346 ~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~----~~~r~ 421 (1255)
.+.|++|+|+.+ .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 469999999999999999999999999999999999999999999999998866542 24567
Q ss_pred ccEEeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 422 QMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 422 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
.++|++|+|.+|+.|++||+.++.+ ...++..++++..++.+.+..+|.|+++..+....+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999998899999998643 234455667777788888888999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHH--HHHHhc-CCCeEEEEecCchhhhhcCEEEEEeCCE
Q 000846 502 PKILLLDEATSALDAQSERIVQE--AIDKVS-KGRTTLIIAHRLSTIRTANLIMVLKAGK 558 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~--~l~~~~-~~~t~i~itH~~~~~~~~d~i~vl~~G~ 558 (1255)
|++|||||||++||+.+...+.+ .++.+. +|.|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988887 455543 3799999999999988899999999884
No 462
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.6e-40 Score=368.64 Aligned_cols=214 Identities=30% Similarity=0.542 Sum_probs=186.4
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcce
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHI 1087 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i 1087 (1255)
.|+++||+.+|.. +..+|+||||+|++||.+|++||||||||||+++|+|+..|++|+|.++|.|...- ...+|++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4789999999962 24699999999999999999999999999999999999999999999999998764 67889999
Q ss_pred EEEccCCCCCcc-cHHHHHhcCC-----C-CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1088 ALVSQEPTLFAG-TIRENIAYGK-----A-DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1088 ~~V~Qdp~LF~g-TIreNl~~g~-----~-~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
|||||+|.++.. |++|||.|.. + ...++.+.+.++..++.+. -......||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDK-----------ANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchh-----------hCcchhhcCHHHHHHHHHHH
Confidence 999999998865 9999997632 2 1224566666666665441 13345679999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-C-CeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMMM-G-RTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~-~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~ 1235 (1255)
||+.+|+||||||||++|||.+...+.+.|++..+ + +||+++||.++.+.. ||+|++|++|+++..|+++++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999875 4 799999999999987 999999999999999999998653
No 463
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.8e-40 Score=358.21 Aligned_cols=202 Identities=28% Similarity=0.493 Sum_probs=166.2
Q ss_pred EEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEE
Q 000846 346 EFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGL 425 (1255)
Q Consensus 346 ~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 425 (1255)
+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++. .++++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 35999999999999999999999999999999999999999999999998764 46778999
Q ss_pred eccCCcc---CcccHHHHhccCCCCC------CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHH
Q 000846 426 VNQEPVL---FATSITENILFGKDGA------SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIAR 496 (1255)
Q Consensus 426 v~Q~~~l---~~~ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lAR 496 (1255)
++|++.+ ++.|++||+.++.... ..++. ...+.+.++.+ |++........+||||||||++|||
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 145 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKAD-----KAKVDEALERV--GLSELADRQIGELSGGQQQRVLLAR 145 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHH
Confidence 9999976 5679999998764311 00110 11122333433 4444455566799999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000846 497 ALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESG 563 (1255)
Q Consensus 497 al~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g 563 (1255)
||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++| +++.|
T Consensus 146 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 146 ALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999875 58999999999999864 9999999986 55544
No 464
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=8.4e-40 Score=342.49 Aligned_cols=172 Identities=41% Similarity=0.689 Sum_probs=161.4
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|++. ..++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999742 246999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EeccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCE
Q 000846 425 LVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKI 504 (1255)
Q Consensus 425 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~i 504 (1255)
|++|+|.+|+.|++||+ ||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhhcCEEEEEeCCEE
Q 000846 505 LLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRTANLIMVLKAGKV 559 (1255)
Q Consensus 505 lllDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~~d~i~vl~~G~i 559 (1255)
|||||||++||+.++..+.+.|+++. +|+|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998875 48999999999999888999999999974
No 465
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=9.2e-40 Score=365.14 Aligned_cols=221 Identities=27% Similarity=0.415 Sum_probs=184.1
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
++++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 789999999963 36999999999999999999999999999999999999999999999999998888878888999
Q ss_pred EeccCCcc-CcccHHHHhccCCCCCCH-HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCC
Q 000846 425 LVNQEPVL-FATSITENILFGKDGASM-DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDP 502 (1255)
Q Consensus 425 ~v~Q~~~l-~~~ti~~ni~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~ 502 (1255)
|++|++.+ +..|++||+.++...... ...........+.+.+..+ |+.......+..||||||||++||||++.+|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999865 456999999876321100 0000000111233444444 4555556677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 503 KILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 503 ~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+++||||||++||+.+...+.+.|+++. +|.|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999875 4789999999999995 599999999999999999988754
No 466
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=363.22 Aligned_cols=218 Identities=30% Similarity=0.499 Sum_probs=182.6
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCCC--CH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRRL--HL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 416 (1255)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 4699999999999999999999999999999999999984 899999999988653 33
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCCC--C-CHH----HHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKDG--A-SMD----DVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
..+++.++|++|+|.+|..|++||+.++... . ..+ ++.++++..++.+. +++..+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDE-------VKSELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCch-------hHHHHhCChhhcCHHHH
Confidence 4667899999999999999999999875311 1 111 12223333332211 12345677789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++||||++++|++|||||||++||+.++..+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999999999998877899999999999875 5999999999999999999998
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14262 233 VER 235 (250)
T ss_pred HhC
Confidence 753
No 467
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.9e-39 Score=354.94 Aligned_cols=208 Identities=30% Similarity=0.487 Sum_probs=173.1
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHH---HHhc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLK---WLRS 421 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~r~ 421 (1255)
|+++|++++|+. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999876543 3678
Q ss_pred ccEEeccCCccC-cccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHh
Q 000846 422 QMGLVNQEPVLF-ATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARAL 498 (1255)
Q Consensus 422 ~i~~v~Q~~~l~-~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal 498 (1255)
.++|++|+|.++ ..|++||+.++.. ....++..+. +.+.++.+ |++........+||||||||++||||+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKV--GLLDKAKNFPIQLSGGEQQRVGIARAV 152 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhhCCchhCCHHHHHHHHHHHHH
Confidence 999999999875 5699999987531 1222222211 12233333 444445556679999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEE
Q 000846 499 IRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVE 561 (1255)
Q Consensus 499 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~ 561 (1255)
+.+|++|||||||++||+.+.+.+.+.|+++. ++.|+|++||+++.+.. ||+|++|++|+++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 153 VNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999874 47999999999999865 99999999999864
No 468
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-40 Score=356.82 Aligned_cols=205 Identities=24% Similarity=0.487 Sum_probs=173.9
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
++++|+++.|++ .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ..+++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 359999999999999999999999999999999999999999999999988753 4577899
Q ss_pred EeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 425 LVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
|++|++.++.+ |++||+.+... .....+. ...+.++++.+ |++........+||||||||++||||++.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEA-----RRRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHH-----HHHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999999875 99999986421 1111111 11234455555 666666777789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESG 563 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g 563 (1255)
|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++.+. .||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999998874 4789999999999885 49999999999998764
No 469
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=378.20 Aligned_cols=211 Identities=27% Similarity=0.448 Sum_probs=179.5
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCC----CHHHHh
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRL----HLKWLR 420 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~----~~~~~r 420 (1255)
|++ |++++|++ . .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.+. +....+
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 89999963 2 23 89999999999999999999999999999999999999999999998653 234457
Q ss_pred cccEEeccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhc
Q 000846 421 SQMGLVNQEPVLFAT-SITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALI 499 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~ 499 (1255)
++++||+|++.+|+. |++||+.++......+++.+.+ +.+ |++........+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l---------~~~--gl~~~~~~~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIV---------ALL--GIEPLLDRYPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHH---------HHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 899999999999975 9999999875432233333333 333 4554555666799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhccC
Q 000846 500 RDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMNRG 572 (1255)
Q Consensus 500 ~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 572 (1255)
.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|+|||+++.+. .||+|++|++|++++.|+++++..++
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 99999999999999999999999999988753 789999999999875 59999999999999999999998764
No 470
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.5e-39 Score=357.46 Aligned_cols=212 Identities=29% Similarity=0.442 Sum_probs=175.0
Q ss_pred eEEEEeEEEEcCCCCC-CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHH---H
Q 000846 344 EIEFRDVYFCYPSRPD-TLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKW---L 419 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~ 419 (1255)
.|+++|++++|++... .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999974221 25999999999999999999999999999999999999999999999999998776543 2
Q ss_pred -hcccEEeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHH
Q 000846 420 -RSQMGLVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIA 495 (1255)
Q Consensus 420 -r~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lA 495 (1255)
++.++|++|+|.+|.. |++||+.++.. .....+. ...+.+.++.+ |++........+||||||||++||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la 158 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQS-----RNGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALA 158 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHH
Confidence 3679999999999875 99999986421 1111111 11123334444 444444555679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 000846 496 RALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-K-GRTTLIIAHRLSTIRTANLIMVLKAGKVVES 562 (1255)
Q Consensus 496 Ral~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~ 562 (1255)
|||+.+|++|||||||++||+.+.+.+.+.|+++. + |+|+|++||+++.+..||++++|++|++++.
T Consensus 159 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 159 RAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999999998874 3 7899999999999878999999999999764
No 471
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=364.36 Aligned_cols=221 Identities=25% Similarity=0.377 Sum_probs=185.5
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCC--------ccEEEECCeecCCCCH
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPV--------EGEVLLDGYKIRRLHL 416 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~--------~G~i~~~g~~~~~~~~ 416 (1255)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999963 35999999999999999999999999999999999999998 9999999999988777
Q ss_pred HHHhcccEEeccCCc-cCcccHHHHhccCCCCC-CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHH
Q 000846 417 KWLRSQMGLVNQEPV-LFATSITENILFGKDGA-SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAI 494 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~-l~~~ti~~ni~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~l 494 (1255)
..+++.++|++|++. +|..|++||+.++.... .............+.+.++.+ |+++..+....+||||||||++|
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 156 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA--GATALVGRDVTTLSGGELARVQF 156 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHH
Confidence 778888999999986 56789999998753211 000000000111223445555 67777788889999999999999
Q ss_pred HHHhc---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEe
Q 000846 495 ARALI---------RDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVES 562 (1255)
Q Consensus 495 ARal~---------~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~ 562 (1255)
||||+ .+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+. .||++++|++|++++.
T Consensus 157 aral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~ 236 (272)
T PRK13547 157 ARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAH 236 (272)
T ss_pred HHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEe
Confidence 99999 59999999999999999999999999998743 799999999999985 5999999999999999
Q ss_pred cChhHHhc
Q 000846 563 GSHNELMN 570 (1255)
Q Consensus 563 g~~~~l~~ 570 (1255)
|+++++..
T Consensus 237 g~~~~~~~ 244 (272)
T PRK13547 237 GAPADVLT 244 (272)
T ss_pred cCHHHHcC
Confidence 99988864
No 472
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=363.32 Aligned_cols=221 Identities=32% Similarity=0.508 Sum_probs=186.1
Q ss_pred ccceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCC--
Q 000846 341 VRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRR-- 413 (1255)
Q Consensus 341 ~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~-- 413 (1255)
..+.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++..
T Consensus 13 ~~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 13 TQQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 3467999999999973 3599999999999999999999999999999999999875 79999999987742
Q ss_pred --CCHHHHhcccEEeccCCccCcccHHHHhccCCC--CCC-----HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCC
Q 000846 414 --LHLKWLRSQMGLVNQEPVLFATSITENILFGKD--GAS-----MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQM 484 (1255)
Q Consensus 414 --~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~L 484 (1255)
.....+++.++|++|++.+|.+|++||+.++.. ... .+++.++++.+++. +++.+..+....+|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALW-------DEVKDRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCc-------hhhhHHHhCCcccC
Confidence 334567889999999999999999999987531 111 12233333333322 13344566778899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 000846 485 SGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESG 563 (1255)
Q Consensus 485 SgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g 563 (1255)
|||||||++|||||+++|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+. .||++++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999998877899999999999985 59999999999999999
Q ss_pred ChhHHhcc
Q 000846 564 SHNELMNR 571 (1255)
Q Consensus 564 ~~~~l~~~ 571 (1255)
+++++...
T Consensus 243 ~~~~~~~~ 250 (265)
T PRK14252 243 ATDTIFIK 250 (265)
T ss_pred CHHHHHhC
Confidence 99998754
No 473
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=7.1e-39 Score=403.61 Aligned_cols=100 Identities=31% Similarity=0.520 Sum_probs=92.2
Q ss_pred cccc-ccCCCCCCCChHHHHHHHHHHHHccCC---CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh
Q 000846 1136 GYDT-YCGERGVQLSGGQKQRIALARAILKNP---SILLLDEATSALDSVSESLVQEALEKMM-MGRTCVVVAHRLSTIQ 1210 (1255)
Q Consensus 1136 gldt-~vge~G~~LSgGQkQrlalARALlr~p---~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~ 1210 (1255)
|++. .++.....||||||||++|||||+++| +++||||||++||+.+.+.+.+.|+++. +|.|+|+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5544 367778899999999999999999999 9999999999999999999999999875 5899999999999999
Q ss_pred hcCEEEEE------eCCEEEEecCHHHHHhh
Q 000846 1211 KSDTIAVI------KNGRVVEQGSHNELVAL 1235 (1255)
Q Consensus 1211 ~~D~I~Vl------~~G~ive~G~~~eLl~~ 1235 (1255)
.||+|++| ++|+|++.|+++++.+.
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~ 928 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKV 928 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhC
Confidence 99999999 69999999999999875
No 474
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=363.22 Aligned_cols=202 Identities=27% Similarity=0.477 Sum_probs=170.6
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +..++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999963 4699999999999999999999999999999999999999999999999998642 34699
Q ss_pred EEccCCCCCc-ccHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHH
Q 000846 1089 LVSQEPTLFA-GTIRENIAYGKA--DARE----SEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARA 1161 (1255)
Q Consensus 1089 ~V~Qdp~LF~-gTIreNl~~g~~--~~~~----~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARA 1161 (1255)
|+||++.+|. .|++||+.++.. .... +++.+.++..+ ++........+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVG-----------LEGAEKRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcC-----------ChhHhhCChhhCCHHHHHHHHHHHH
Confidence 9999999887 699999976421 1122 22333333333 3333344567899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEe--CCEEEEecCH
Q 000846 1162 ILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIK--NGRVVEQGSH 1229 (1255)
Q Consensus 1162 Llr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~--~G~ive~G~~ 1229 (1255)
|+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999999873 48999999999999865 99999998 5999998764
No 475
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=366.69 Aligned_cols=217 Identities=33% Similarity=0.570 Sum_probs=181.2
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCC--CCHHHHhcc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRR--LHLKWLRSQ 422 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~--~~~~~~r~~ 422 (1255)
|+++|++++|+. ..++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...++++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 689999999963 2359999999999999999999999999999999999999999999999999852 234567889
Q ss_pred cEEeccCC--ccCcccHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHh
Q 000846 423 MGLVNQEP--VLFATSITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARAL 498 (1255)
Q Consensus 423 i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal 498 (1255)
|+|++|+| .+|..|++||+.++.. ..+.++..+ .+.+.++.+ |++........+||||||||++||||+
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~laral 152 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAV--GMEGFENKPPHHLSGGQKKRVAIAGIL 152 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999998 4778899999987532 112222111 112333333 444444555679999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 499 IRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 499 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
+.+|+++||||||++||+.+...+.+.|+++. +|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 153 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 153 AMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999875 4899999999999986 599999999999999999999865
No 476
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.7e-40 Score=356.58 Aligned_cols=205 Identities=33% Similarity=0.557 Sum_probs=173.5
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCC--CCHHHHhcc
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRR--LHLKWLRSQ 422 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~--~~~~~~r~~ 422 (1255)
|+++|++++|++ .++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999974 359999999999999999999999999999999999999999999999998853 344567889
Q ss_pred cEEeccCCccCc-ccHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHh
Q 000846 423 MGLVNQEPVLFA-TSITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARAL 498 (1255)
Q Consensus 423 i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal 498 (1255)
++|++|++.+|. .|++||+.++.. ....++.. ..+.+.++.+ |++........+||||||||++||||+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAE-----ERALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999987 599999987531 11222211 1123445555 666666777789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhh-hcCEEEEEeCCEE
Q 000846 499 IRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIR-TANLIMVLKAGKV 559 (1255)
Q Consensus 499 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~vl~~G~i 559 (1255)
+++|++|||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+. .||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999875 4899999999999986 4999999999974
No 477
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-39 Score=378.86 Aligned_cols=232 Identities=29% Similarity=0.487 Sum_probs=185.2
Q ss_pred ceEEEEeEEEEcCCC--------CCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCee--cC
Q 000846 343 GEIEFRDVYFCYPSR--------PDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYK--IR 412 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~--------~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~--~~ 412 (1255)
.-++++|++++|..+ ....+++||||++++||++||||+||||||||.++|+|+.+|++|+|.++|.+ ++
T Consensus 279 ~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~ 358 (539)
T COG1123 279 PLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLT 358 (539)
T ss_pred ceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccc
Confidence 357899999999742 13568999999999999999999999999999999999999999999999987 23
Q ss_pred CCCHHHHhcccEEeccCCc--cCc-ccHHHHhccCCCCCCHHHHHHHHHHhchHHHHhcCCCcccc-hhcCCCCCCChHH
Q 000846 413 RLHLKWLRSQMGLVNQEPV--LFA-TSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYET-QVGQLGFQMSGGQ 488 (1255)
Q Consensus 413 ~~~~~~~r~~i~~v~Q~~~--l~~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~~~~g~~LSgGq 488 (1255)
.-+....|+++-+|+|||+ |-+ .||+++|.-......... .+.+.+.+.+.++.. |+.. .......+|||||
T Consensus 359 ~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~--~~~~~~rv~~ll~~V--gL~~~~l~ryP~elSGGQ 434 (539)
T COG1123 359 GGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGS--GAERRARVAELLELV--GLPPEFLDRYPHELSGGQ 434 (539)
T ss_pred cchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccc--hHHHHHHHHHHHHHc--CCCHHHHhcCchhcCcch
Confidence 2234567889999999996 444 499999974321110000 111111222333322 3333 4567778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecCh
Q 000846 489 KQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSH 565 (1255)
Q Consensus 489 rqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~ 565 (1255)
||||||||||..+|+++++|||||+||+.+...+.+.|+++.+ |.|.|+||||++.++. ||||+||++|+|||.|+.
T Consensus 435 rQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~ 514 (539)
T COG1123 435 RQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPT 514 (539)
T ss_pred hHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCH
Confidence 9999999999999999999999999999999999999999864 8999999999999976 999999999999999999
Q ss_pred hHHhccCCCChhHH
Q 000846 566 NELMNRGEGGEYYQ 579 (1255)
Q Consensus 566 ~~l~~~~~~~~~~~ 579 (1255)
+++.+.+. ..|.+
T Consensus 515 ~~v~~~p~-h~Ytr 527 (539)
T COG1123 515 EKVFENPQ-HPYTR 527 (539)
T ss_pred HHHhcCCC-ChHHH
Confidence 99988743 44443
No 478
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=363.31 Aligned_cols=218 Identities=30% Similarity=0.494 Sum_probs=181.3
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCC--CCH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRR--LHL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 416 (1255)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999974 3599999999999999999999999999999999999974 79999999999853 345
Q ss_pred HHHhcccEEeccCCccCcc-cHHHHhccCCCC---CCHH----HHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHH
Q 000846 417 KWLRSQMGLVNQEPVLFAT-SITENILFGKDG---ASMD----DVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQ 488 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 488 (1255)
..+|+.++|++|++.+|.. |++||+.++... ...+ .+.++++..++.+ +..........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWN-------EVKDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhhhHhhCCcccCCHHH
Confidence 5678899999999999875 999999865311 1111 1222222222211 11234566778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEe------CCEEEE
Q 000846 489 KQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLK------AGKVVE 561 (1255)
Q Consensus 489 rqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~------~G~i~~ 561 (1255)
|||++||||++.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|+ +|++++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 9999999999999999999999999999999999999998877899999999999985 599999997 899999
Q ss_pred ecChhHHhcc
Q 000846 562 SGSHNELMNR 571 (1255)
Q Consensus 562 ~g~~~~l~~~ 571 (1255)
.|+++++...
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999998754
No 479
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-40 Score=320.19 Aligned_cols=227 Identities=31% Similarity=0.538 Sum_probs=190.1
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCC---------
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRL--------- 414 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~--------- 414 (1255)
.++++|++++|+.. .+|++|||+.++|+.+.|+|.|||||||+++||.=+-.|+.|+|.++|..+.-.
T Consensus 6 ~l~v~dlHK~~G~~---eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 6 ALEVEDLHKRYGEH---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred ceehhHHHhhcccc---hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeee
Confidence 58999999999743 499999999999999999999999999999999999999999999999887421
Q ss_pred ----CHHHHhcccEEeccCCccCcc-cHHHHhccCCC---CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCCh
Q 000846 415 ----HLKWLRSQMGLVNQEPVLFAT-SITENILFGKD---GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSG 486 (1255)
Q Consensus 415 ----~~~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 486 (1255)
..+.+|.+.++|+|+..|++. ||.||+.-+.- ..+..+..+ .+..++.+. |+.......+..|||
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e-----~Ae~~L~kV--Gi~ek~~~YP~~LSG 155 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIE-----RAEKYLAKV--GIAEKADAYPAHLSG 155 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHH-----HHHHHHHHh--CchhhhhcCccccCc
Confidence 134688999999999999976 99999864311 112222221 123445554 666666677789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecC
Q 000846 487 GQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGS 564 (1255)
Q Consensus 487 Gqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~ 564 (1255)
||+||+||||||..+|+++++|||||+|||+-...+.+.++++. +|+|.++|||.+.+.+. +.+|+.+++|.|-|+|+
T Consensus 156 GQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~ 235 (256)
T COG4598 156 GQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGP 235 (256)
T ss_pred hHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCC
Confidence 99999999999999999999999999999999999999998885 59999999999999987 89999999999999999
Q ss_pred hhHHhccCCCChhHHH
Q 000846 565 HNELMNRGEGGEYYQM 580 (1255)
Q Consensus 565 ~~~l~~~~~~~~~~~~ 580 (1255)
|+++..++......++
T Consensus 236 P~qvf~nP~S~RlkqF 251 (256)
T COG4598 236 PEQVFGNPQSPRLKQF 251 (256)
T ss_pred hHHHhcCCCCHHHHHH
Confidence 9999987655444433
No 480
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-39 Score=362.82 Aligned_cols=219 Identities=32% Similarity=0.469 Sum_probs=183.7
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CccEEEECCeecCC--CC
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDP-----VEGEVLLDGYKIRR--LH 415 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 415 (1255)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 36999999999973 3599999999999999999999999999999999999863 69999999999864 33
Q ss_pred HHHHhcccEEeccCCccCcccHHHHhccCCCCC-----CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHH
Q 000846 416 LKWLRSQMGLVNQEPVLFATSITENILFGKDGA-----SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQ 490 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrq 490 (1255)
...+|++|+|++|++.+|+.|+.||+.++.... ..+.+.++++.+++.+. +.......+.+|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEE-------VKDKLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchh-------hHHHhcCCcccCCHHHHH
Confidence 456788999999999999889999998753211 11222333333333222 223345667899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEe---------CCEEE
Q 000846 491 RIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLK---------AGKVV 560 (1255)
Q Consensus 491 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~---------~G~i~ 560 (1255)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 99999999999999999999999999999999999999877899999999999985 599999997 89999
Q ss_pred EecChhHHhcc
Q 000846 561 ESGSHNELMNR 571 (1255)
Q Consensus 561 ~~g~~~~l~~~ 571 (1255)
+.|+++++...
T Consensus 249 ~~g~~~~~~~~ 259 (274)
T PRK14265 249 EFSPTEQMFGS 259 (274)
T ss_pred EeCCHHHHHhC
Confidence 99999998764
No 481
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=362.22 Aligned_cols=220 Identities=31% Similarity=0.494 Sum_probs=181.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCC-----ccEEEECCeecCC--CCH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPV-----EGEVLLDGYKIRR--LHL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~-----~G~i~~~g~~~~~--~~~ 416 (1255)
-++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 4789999999963 46999999999999999999999999999999999999874 8999999999865 334
Q ss_pred HHHhcccEEeccCCccCcc-cHHHHhccCCC--CC-CHHHHHHHHHHhchHHHHhcC--CCcccchhcCCCCCCChHHHH
Q 000846 417 KWLRSQMGLVNQEPVLFAT-SITENILFGKD--GA-SMDDVISAAKAANAHDFITKL--PDGYETQVGQLGFQMSGGQKQ 490 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGqrq 490 (1255)
..+|+.++|++|++.+|.. |++||+.++.. .. ..++..+.+. +.+..+ ..++.........+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~G~~q 155 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAE-----RSLRGAALWDEVKDRLKTPATGLSGGQQQ 155 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHH-----HHHHHcCcchhhhhhhcCCcccCCHHHHH
Confidence 5678899999999999885 99999986532 11 2222222211 111111 111222334556799999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000846 491 RIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELM 569 (1255)
Q Consensus 491 ri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 569 (1255)
|++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 156 RLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999999875 9999999999999999999987
Q ss_pred cc
Q 000846 570 NR 571 (1255)
Q Consensus 570 ~~ 571 (1255)
..
T Consensus 236 ~~ 237 (252)
T PRK14272 236 TN 237 (252)
T ss_pred hC
Confidence 64
No 482
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.4e-39 Score=355.32 Aligned_cols=208 Identities=31% Similarity=0.461 Sum_probs=173.0
Q ss_pred EEEEEEEEECCCCC-CCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHH---HHh
Q 000846 1009 IELKNVFFAYPTRP-DQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLK---QLR 1084 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~-~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~lR 1084 (1255)
++++||+++|+... +.++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996321 24699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cceEEEccCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHH
Q 000846 1085 SHIALVSQEPTLFA-GTIRENIAYGKA---DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALAR 1160 (1255)
Q Consensus 1085 ~~i~~V~Qdp~LF~-gTIreNl~~g~~---~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalAR 1160 (1255)
+.++|+||+|.+|. .|+.||+.++.. ..+.++..+ .+.+.++.+ |++........+||+|||||++|||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrv~lar 154 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARE-----RARAMLEAV--GLGDHLDYYPHNLSGGQKQRVAIAR 154 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHH
Confidence 89999999999987 699999986532 122222211 122233332 3333344455689999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000846 1161 AILKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQKSDTIAVIKNGRV 1223 (1255)
Q Consensus 1161 ALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~i 1223 (1255)
|++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++....||+|++|++|++
T Consensus 155 al~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 155 ALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999999998763 7999999999998778999999999986
No 483
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-39 Score=352.13 Aligned_cols=201 Identities=27% Similarity=0.451 Sum_probs=169.2
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|++. . .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 4789999999632 2 39999999999999999999999999999999999999999999999876654 357899
Q ss_pred EeccCCccCcc-cHHHHhccCCCC-C-----CHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHH
Q 000846 425 LVNQEPVLFAT-SITENILFGKDG-A-----SMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARA 497 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~~-~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARa 497 (1255)
|++|++.+|.+ |++||+.++... . ..+++.++++..++ +........+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGL-----------AGLEKRLPGELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCC-----------HHHHhCCcccCCHHHHHHHHHHHH
Confidence 99999999976 999999876421 1 11233334444444 333444556899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 000846 498 LIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESG 563 (1255)
Q Consensus 498 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g 563 (1255)
++.+|+++||||||++||++++..+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999874 38999999999999865 9999999999998764
No 484
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.6e-39 Score=377.74 Aligned_cols=216 Identities=29% Similarity=0.452 Sum_probs=178.5
Q ss_pred EEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCC----HHHHhcceE
Q 000846 1013 NVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYN----LKQLRSHIA 1088 (1255)
Q Consensus 1013 ~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~----~~~lR~~i~ 1088 (1255)
|++++|++ .. + |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|++|+
T Consensus 4 ~l~~~~~~---~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 89999963 23 4 999999999999999999999999999999999999999999999986532 345688999
Q ss_pred EEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCC
Q 000846 1089 LVSQEPTLFAG-TIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPS 1167 (1255)
Q Consensus 1089 ~V~Qdp~LF~g-TIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~ 1167 (1255)
||||++.+|.. |++||+.++.......+. ...+.++++.+ |++........+||||||||++|||||+++|+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~-----~~~~~~~l~~~--gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~ 151 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSER-----RISFERVIELL--GIGHLLGRLPGRLSGGEKQRVAIGRALLSSPR 151 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHH-----HHHHHHHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 99999999975 999999886432221111 11122233322 44444455567899999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCHHHHHhhhcCchh
Q 000846 1168 ILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGSHNELVALSRGGAY 1241 (1255)
Q Consensus 1168 ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~~~eLl~~~~~g~y 1241 (1255)
+|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++... ++..|
T Consensus 152 lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~ 227 (354)
T TIGR02142 152 LLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWAS-PDLPW 227 (354)
T ss_pred EEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcC-cCccc
Confidence 9999999999999999999999998753 7899999999999865 999999999999999999999875 44344
No 485
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=373.66 Aligned_cols=228 Identities=22% Similarity=0.368 Sum_probs=182.9
Q ss_pred eEEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC----CCccEEEECCeecCCCCHHH
Q 000846 344 EIEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD----PVEGEVLLDGYKIRRLHLKW 418 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~----~~~G~i~~~g~~~~~~~~~~ 418 (1255)
-|+++|++++|+.+. ...+|+||||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++..++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 378999999996421 2469999999999999999999999999999999999986 58999999999998877654
Q ss_pred H----hcccEEeccCCc--cCc-ccHHHHhccCCC-----C---CCHHHHHHHHHHhchHHHHhcCCCccc---chhcCC
Q 000846 419 L----RSQMGLVNQEPV--LFA-TSITENILFGKD-----G---ASMDDVISAAKAANAHDFITKLPDGYE---TQVGQL 480 (1255)
Q Consensus 419 ~----r~~i~~v~Q~~~--l~~-~ti~~ni~~~~~-----~---~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~~~ 480 (1255)
+ ++.|+||+|+|. ++. .||.+|+..... . ....+. ...+.+.++.+ |++ ......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~~~--gL~~~~~~~~~~ 155 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWR-----KRRAIELLHRV--GIKDHKDAMRSF 155 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHH-----HHHHHHHHHHC--CCCChHHHHhCC
Confidence 4 347999999996 343 489999864210 0 000111 11223344444 443 234566
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCC
Q 000846 481 GFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAG 557 (1255)
Q Consensus 481 g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G 557 (1255)
..+|||||||||+|||||+.+|++|||||||++||+.++..+.+.|+++.+ |.|+|+|||+++.+. .||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 789999999999999999999999999999999999999999999998754 899999999999996 49999999999
Q ss_pred EEEEecChhHHhccCCCChhHH
Q 000846 558 KVVESGSHNELMNRGEGGEYYQ 579 (1255)
Q Consensus 558 ~i~~~g~~~~l~~~~~~~~~~~ 579 (1255)
+|++.|+++++.+++ ...|.+
T Consensus 236 ~ive~g~~~~i~~~p-~~~y~~ 256 (330)
T PRK15093 236 QTVETAPSKELVTTP-HHPYTQ 256 (330)
T ss_pred EEEEECCHHHHHhCC-CCHHHH
Confidence 999999999998753 334543
No 486
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=362.39 Aligned_cols=219 Identities=31% Similarity=0.492 Sum_probs=183.2
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCC-----ccEEEECCeecCC--CC
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPV-----EGEVLLDGYKIRR--LH 415 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~-----~G~i~~~g~~~~~--~~ 415 (1255)
+.|+++|++++|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 35999999999999999999999999999999999999985 8999999998753 34
Q ss_pred HHHHhcccEEeccCCccCcccHHHHhccCCCC--C-CH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHH
Q 000846 416 LKWLRSQMGLVNQEPVLFATSITENILFGKDG--A-SM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQ 488 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 488 (1255)
...+|+.++|++|++.+|..|++||+.++... . +. +.+.++++..++.++ ++...+..+.+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDE-------IKHKIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcch-------hhhHhcCCcccCCHHH
Confidence 45678899999999999999999999864211 0 11 122333333333222 2234566778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhhh-hcCEEEEEeC-----CEEE
Q 000846 489 KQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTIR-TANLIMVLKA-----GKVV 560 (1255)
Q Consensus 489 rqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~~d~i~vl~~-----G~i~ 560 (1255)
|||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+. .||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999998863 4899999999999986 5999999999 9999
Q ss_pred EecChhHHhcc
Q 000846 561 ESGSHNELMNR 571 (1255)
Q Consensus 561 ~~g~~~~l~~~ 571 (1255)
+.|+++++...
T Consensus 236 ~~~~~~~~~~~ 246 (261)
T PRK14258 236 EFGLTKKIFNS 246 (261)
T ss_pred EeCCHHHHHhC
Confidence 99999999764
No 487
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.6e-39 Score=361.96 Aligned_cols=218 Identities=28% Similarity=0.455 Sum_probs=183.2
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCee-----cCCCCHHH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYK-----IRRLHLKW 418 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~-----~~~~~~~~ 418 (1255)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +...+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999974 359999999999999999999999999999999999999999999999998 77665543
Q ss_pred ----HhcccEEeccCCc--cCc-ccHHHHhccCC---CCCCHHHHHHHHHHhchHHHHhcCCCccc-chhcCCCCCCChH
Q 000846 419 ----LRSQMGLVNQEPV--LFA-TSITENILFGK---DGASMDDVISAAKAANAHDFITKLPDGYE-TQVGQLGFQMSGG 487 (1255)
Q Consensus 419 ----~r~~i~~v~Q~~~--l~~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgG 487 (1255)
.++.++|++|++. ++. .|+.+|+.+.. ......+.. ..+.++++.+ |++ +..+..+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 444 48899986421 111112221 1234566666 554 4677888999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecC
Q 000846 488 QKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGS 564 (1255)
Q Consensus 488 qrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~ 564 (1255)
||||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+ |.|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988743 889999999999996 599999999999999999
Q ss_pred hhHHhcc
Q 000846 565 HNELMNR 571 (1255)
Q Consensus 565 ~~~l~~~ 571 (1255)
++++..+
T Consensus 236 ~~~~~~~ 242 (258)
T PRK11701 236 TDQVLDD 242 (258)
T ss_pred HHHHhcC
Confidence 9998764
No 488
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=365.70 Aligned_cols=219 Identities=28% Similarity=0.456 Sum_probs=182.1
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCCC--C
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRRL--H 415 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~~--~ 415 (1255)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||+++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 46899999999963 359999999999999999999999999999999999864 4999999999998643 3
Q ss_pred HHHHhcccEEeccCCccCcccHHHHhccCCC--CC-CHH----HHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHH
Q 000846 416 LKWLRSQMGLVNQEPVLFATSITENILFGKD--GA-SMD----DVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQ 488 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 488 (1255)
...+|++++||+|+|.+|..|++||+.++.. .. ... .+.++++..++.+ ++.......+..|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWD-------EVSDRLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCcc-------chhhHhhCChhhCCHHH
Confidence 3457889999999999998899999987532 11 111 1222222222211 12233456778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhH
Q 000846 489 KQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNE 567 (1255)
Q Consensus 489 rqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~ 567 (1255)
|||++|||||+.+|++|||||||++||+++.+.+.+.|+++.+++|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999998877789999999999985 599999999999999999999
Q ss_pred Hhcc
Q 000846 568 LMNR 571 (1255)
Q Consensus 568 l~~~ 571 (1255)
+.++
T Consensus 268 ~~~~ 271 (286)
T PRK14275 268 LFTN 271 (286)
T ss_pred HHhC
Confidence 8764
No 489
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-39 Score=348.60 Aligned_cols=191 Identities=24% Similarity=0.377 Sum_probs=164.1
Q ss_pred cEEEEEEEEECCCC-CCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC---CCCceEEECCeecCCCCHHHH
Q 000846 1008 RIELKNVFFAYPTR-PDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYD---PLKGSVFMDEQDIRNYNLKQL 1083 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~-~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~l 1083 (1255)
.+.++||+|.|+.. .++++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 37899999999843 35679999999999999999999999999999999999999 89999999999998765 457
Q ss_pred hcceEEEccCCCCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHH
Q 000846 1084 RSHIALVSQEPTLFA-GTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAI 1162 (1255)
Q Consensus 1084 R~~i~~V~Qdp~LF~-gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARAL 1162 (1255)
|++++|+||++.+|. .|++||+.++.. . . ..+....||||||||++|||||
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~------~----~------------------~~~~~~~LS~Ge~qrl~laral 133 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALR------C----K------------------GNEFVRGISGGERKRVSIAEAL 133 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhh------h----c------------------cccchhhCCHHHHHHHHHHHHH
Confidence 889999999998886 599999965421 0 0 1234467999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEc-cCchhh-hhcCEEEEEeCCEEEEec
Q 000846 1163 LKNPSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVA-HRLSTI-QKSDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1163 lr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~Ia-Hrl~ti-~~~D~I~Vl~~G~ive~G 1227 (1255)
+++|+||||||||++||+++++.+.+.|++..+ ++|+|+++ |+++.+ ..||++++|++|++++.|
T Consensus 134 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 134 VSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999999998754 56766665 555666 569999999999998865
No 490
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=359.75 Aligned_cols=218 Identities=31% Similarity=0.524 Sum_probs=184.4
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCCC--CH
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRRL--HL 416 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~~--~~ 416 (1255)
.++++||++.|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||+++... +.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 459999999999999999999999999999999999864 4899999999998653 45
Q ss_pred HHHhcccEEeccCCccCcccHHHHhccCCC--CC-CH----HHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 417 KWLRSQMGLVNQEPVLFATSITENILFGKD--GA-SM----DDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 417 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
..++++++|+||+|.+|+.|++||+.++.. .. .. +++.++++.+++.+++. ...+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-------DKLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-------HHHhCCcccCCHHHH
Confidence 567889999999999999999999987532 11 11 12334444444433332 234566789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNEL 568 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l 568 (1255)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. +|++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998865 999999999999999999998
Q ss_pred hcc
Q 000846 569 MNR 571 (1255)
Q Consensus 569 ~~~ 571 (1255)
...
T Consensus 233 ~~~ 235 (250)
T PRK14266 233 FIN 235 (250)
T ss_pred HhC
Confidence 754
No 491
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-39 Score=354.80 Aligned_cols=208 Identities=30% Similarity=0.497 Sum_probs=176.6
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++||+++|+. . ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEE
Confidence 789999999963 2 2399999999999999999999999999999999999999999999998765442 56899
Q ss_pred EeccCCccCcc-cHHHHhccCCCCC---C---HHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHH
Q 000846 425 LVNQEPVLFAT-SITENILFGKDGA---S---MDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARA 497 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~~~---~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARa 497 (1255)
|++|++.+|.+ |++||+.++.... . ++++.++++..+ ++..+......||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMG-----------IEDLLARLPGQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcC-----------cHHHHhCCcccCCHHHHHHHHHHHH
Confidence 99999999986 9999998753211 1 122344444444 4444445556899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000846 498 LIRDPKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 498 l~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
++++|+++||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999988743 8899999999999864 99999999999999999999875
No 492
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.3e-39 Score=361.91 Aligned_cols=220 Identities=29% Similarity=0.438 Sum_probs=181.9
Q ss_pred eEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCC---ccEEEECCeecCCC-----C
Q 000846 344 EIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPV---EGEVLLDGYKIRRL-----H 415 (1255)
Q Consensus 344 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~---~G~i~~~g~~~~~~-----~ 415 (1255)
-|+++||++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 46999999999999999999999999999999999999986 49999999988653 2
Q ss_pred HHHHhcccEEeccCCccCcc-cHHHHhccCCCCCCH--H---HHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHH
Q 000846 416 LKWLRSQMGLVNQEPVLFAT-SITENILFGKDGASM--D---DVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQK 489 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~--~---~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqr 489 (1255)
...++++++|++|++.+|.. |++||+.++...... . ..........+.+.++.+ |++........+||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRV--GMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHc--CCHHHHhCCccccCHHHH
Confidence 34567889999999998875 999999876421100 0 000001112234455555 555556667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCCeEEEEecCchhh-hhcCEEEEEeCCEEEEecChh
Q 000846 490 QRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVS--KGRTTLIIAHRLSTI-RTANLIMVLKAGKVVESGSHN 566 (1255)
Q Consensus 490 qri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~-~~~d~i~vl~~G~i~~~g~~~ 566 (1255)
||++||||++.+|++|||||||++||+++.+.+.+.|+++. +|+|+|++||+++.+ ..||+|++|++|++++.|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999875 389999999999987 459999999999999999999
Q ss_pred HH
Q 000846 567 EL 568 (1255)
Q Consensus 567 ~l 568 (1255)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 86
No 493
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.2e-39 Score=372.02 Aligned_cols=204 Identities=27% Similarity=0.489 Sum_probs=173.5
Q ss_pred CccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccEEeccCCccCcc-cHH
Q 000846 360 TLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFAT-SIT 438 (1255)
Q Consensus 360 ~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~-ti~ 438 (1255)
.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+|+++||+||++.++.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999875 345678899999999999876 999
Q ss_pred HHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 000846 439 ENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDA 516 (1255)
Q Consensus 439 ~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~~~illlDEpts~lD~ 516 (1255)
||+.+... ..+..+.. ..+.+.++.+ |++........+||||||||++|||||+++|++|||||||++||+
T Consensus 85 e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAE-----ERAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred HHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 99986421 11111111 1123444544 555555666789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhcc
Q 000846 517 QSERIVQEAIDKVS-KGRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 517 ~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999999999875 48999999999999864 999999999999999999998653
No 494
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.5e-39 Score=357.02 Aligned_cols=215 Identities=33% Similarity=0.512 Sum_probs=181.6
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|+. +++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 478999999973 359999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EeccCCccCcc-cHHHHhccCCCC--CCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 425 LVNQEPVLFAT-SITENILFGKDG--ASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
|+||+|.+|.+ |++||+.++... .+..+. ...+.+.++.+ |+.........+||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKI-----KARVEELLELV--QLEGLGDRYPNQLSGGQRQRVALARALAVE 148 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 999999875421 111111 11223445554 444445556679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhcc
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIRT-ANLIMVLKAGKVVESGSHNELMNR 571 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 571 (1255)
|+++||||||++||+++++.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 149 PQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999998754 7999999999998754 999999999999999999998753
No 495
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=3.5e-39 Score=360.28 Aligned_cols=226 Identities=24% Similarity=0.419 Sum_probs=184.6
Q ss_pred cEEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCee-----cCCCCHHH
Q 000846 1008 RIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQD-----IRNYNLKQ 1082 (1255)
Q Consensus 1008 ~I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~i~~~~ 1082 (1255)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +..++...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (253)
T TIGR02323 3 LLQVSGLSKSYGG---GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAE 79 (253)
T ss_pred eEEEeeeEEEeCC---ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHH
Confidence 4899999999963 358999999999999999999999999999999999999999999999988 77766543
Q ss_pred ----HhcceEEEccCCC--C-CcccHHHHHhcCC--CC-CCHHHHHHHHHHhcHHHHHHccccccc-cccCCCCCCCChH
Q 000846 1083 ----LRSHIALVSQEPT--L-FAGTIRENIAYGK--AD-ARESEIKKAAVLANAHEFISGMKDGYD-TYCGERGVQLSGG 1151 (1255)
Q Consensus 1083 ----lR~~i~~V~Qdp~--L-F~gTIreNl~~g~--~~-~~~~ei~~al~~a~l~~~i~~lp~gld-t~vge~G~~LSgG 1151 (1255)
+++.++|++|+|. + +..|+.+|+.+.. .. ....+. ...+.++++.+ |++ +........||||
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~LSgG 152 (253)
T TIGR02323 80 RRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEV--EIDPTRIDDLPRAFSGG 152 (253)
T ss_pred HHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHc--CCChhhhhcCchhcCHH
Confidence 3467999999985 2 3458888985321 00 011111 12344566655 343 3556677899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000846 1152 QKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMM--MGRTCVVVAHRLSTIQK-SDTIAVIKNGRVVEQGS 1228 (1255)
Q Consensus 1152 QkQrlalARALlr~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G~ 1228 (1255)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. .+.|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 153 ~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~ 232 (253)
T TIGR02323 153 MQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGL 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999999999999864 37899999999999975 99999999999999999
Q ss_pred HHHHHhhhcCchhHHH
Q 000846 1229 HNELVALSRGGAYYSL 1244 (1255)
Q Consensus 1229 ~~eLl~~~~~g~y~~l 1244 (1255)
++++... +...|.++
T Consensus 233 ~~~~~~~-~~~~~~~~ 247 (253)
T TIGR02323 233 TDQVLDD-PQHPYTQL 247 (253)
T ss_pred HHHHhcC-CCCHHHHH
Confidence 9999864 34445543
No 496
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-39 Score=338.04 Aligned_cols=171 Identities=57% Similarity=0.923 Sum_probs=161.7
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCCHHHHhcceE
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIA 1088 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~lR~~i~ 1088 (1255)
|+++|++++|++. +.++++|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (171)
T cd03228 1 IEFKNVSFSYPGR-PKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIA 79 (171)
T ss_pred CEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEE
Confidence 4789999999743 236999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 000846 1089 LVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSI 1168 (1255)
Q Consensus 1089 ~V~Qdp~LF~gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~p~I 1168 (1255)
|+||+|.+|+.|++||+ ||||||||++||||++++|++
T Consensus 80 ~~~~~~~~~~~t~~e~l------------------------------------------LS~G~~~rl~la~al~~~p~l 117 (171)
T cd03228 80 YVPQDPFLFSGTIRENI------------------------------------------LSGGQRQRIAIARALLRDPPI 117 (171)
T ss_pred EEcCCchhccchHHHHh------------------------------------------hCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000846 1169 LLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGR 1222 (1255)
Q Consensus 1169 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ 1222 (1255)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|+
T Consensus 118 lllDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 118 LILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EEEECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 999999999999999999999998877899999999999998899999999985
No 497
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-39 Score=357.12 Aligned_cols=214 Identities=33% Similarity=0.512 Sum_probs=179.9
Q ss_pred EEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccCCCccEEEECCeecCCCCHHHHhcccE
Q 000846 345 IEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMG 424 (1255)
Q Consensus 345 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 424 (1255)
|+++|++++|+. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 468999999973 359999999999999999999999999999999999999999999999999876654 267899
Q ss_pred EeccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhchHHHHhcCCCcccchhcCCCCCCChHHHHHHHHHHHhccC
Q 000846 425 LVNQEPVLFAT-SITENILFGKD--GASMDDVISAAKAANAHDFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRD 501 (1255)
Q Consensus 425 ~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal~~~ 501 (1255)
|++|++.+|.+ |++||+.++.. ..+..... ..+.+.++.+ |++........+||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIK-----ERVAEALDLV--QLEGYANRKPSQLSGGQQQRVAIARALVNE 148 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 99999986532 11111111 1112233333 455455556679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000846 502 PKILLLDEATSALDAQSERIVQEAIDKVSK--GRTTLIIAHRLSTIR-TANLIMVLKAGKVVESGSHNELMN 570 (1255)
Q Consensus 502 ~~illlDEpts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 570 (1255)
|+++||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 149 p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~ 220 (232)
T cd03300 149 PKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYE 220 (232)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHh
Confidence 999999999999999999999999998753 899999999999985 599999999999999999988865
No 498
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-39 Score=366.85 Aligned_cols=226 Identities=29% Similarity=0.489 Sum_probs=184.7
Q ss_pred ceEEEEeEEEEcCCCCCCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCccEEEECCeecCCC--C
Q 000846 343 GEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD-----PVEGEVLLDGYKIRRL--H 415 (1255)
Q Consensus 343 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~-----~~~G~i~~~g~~~~~~--~ 415 (1255)
..|+++|++++|++ .++|+++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 36999999999974 359999999999999999999999999999999999986 6899999999998643 3
Q ss_pred HHHHhcccEEeccCCccCcccHHHHhccCCCCCCH-H--------HHH-HHHHHhchHHHHhc--CCCcccchhcCCCCC
Q 000846 416 LKWLRSQMGLVNQEPVLFATSITENILFGKDGASM-D--------DVI-SAAKAANAHDFITK--LPDGYETQVGQLGFQ 483 (1255)
Q Consensus 416 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~-~--------~~~-~~~~~~~~~~~i~~--l~~g~~t~~~~~g~~ 483 (1255)
...+|+.++||+|++.+|+.||+||+.++...... + ... .......+.+.+.. ++.++++..+..+.+
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 200 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRLDDNALG 200 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHhcCcccc
Confidence 55678899999999999999999999976321000 0 000 00001111222222 233445667788899
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCchhhh-hcCEE-EEEeCCEEEE
Q 000846 484 MSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIR-TANLI-MVLKAGKVVE 561 (1255)
Q Consensus 484 LSgGqrqri~lARal~~~~~illlDEpts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~~d~i-~vl~~G~i~~ 561 (1255)
||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||++ ++|++|++++
T Consensus 201 LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~G~i~~ 280 (305)
T PRK14264 201 LSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTGGELVE 280 (305)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecCCEEEE
Confidence 999999999999999999999999999999999999999999999877789999999999985 59997 5789999999
Q ss_pred ecChhHHhcc
Q 000846 562 SGSHNELMNR 571 (1255)
Q Consensus 562 ~g~~~~l~~~ 571 (1255)
.|+++++.+.
T Consensus 281 ~g~~~~~~~~ 290 (305)
T PRK14264 281 YDDTDKIFEN 290 (305)
T ss_pred eCCHHHHHhC
Confidence 9999998754
No 499
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-39 Score=341.05 Aligned_cols=172 Identities=44% Similarity=0.702 Sum_probs=159.5
Q ss_pred EEEEEEEEECCCCCCCccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCeecCCCC--HHHHhcc
Q 000846 1009 IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYN--LKQLRSH 1086 (1255)
Q Consensus 1009 I~~~~Vsf~Y~~~~~~~vL~~vs~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--~~~lR~~ 1086 (1255)
|+++|++++|+. .++++|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (178)
T cd03229 1 LELKNVSKRYGQ---KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRR 77 (178)
T ss_pred CEEEEEEEEECC---eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhc
Confidence 578999999963 46999999999999999999999999999999999999999999999999998876 5678899
Q ss_pred eEEEccCCCCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHccccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 000846 1087 IALVSQEPTLFA-GTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKN 1165 (1255)
Q Consensus 1087 i~~V~Qdp~LF~-gTIreNl~~g~~~~~~~ei~~al~~a~l~~~i~~lp~gldt~vge~G~~LSgGQkQrlalARALlr~ 1165 (1255)
++|+||+|.+|. .|++||+.+. ||||||||++|||||+++
T Consensus 78 i~~~~q~~~~~~~~t~~~~l~~~---------------------------------------lS~G~~qr~~la~al~~~ 118 (178)
T cd03229 78 IGMVFQDFALFPHLTVLENIALG---------------------------------------LSGGQQQRVALARALAMD 118 (178)
T ss_pred EEEEecCCccCCCCCHHHheeec---------------------------------------CCHHHHHHHHHHHHHHCC
Confidence 999999999886 5999999643 999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCE
Q 000846 1166 PSILLLDEATSALDSVSESLVQEALEKMMM--GRTCVVVAHRLSTIQK-SDTIAVIKNGR 1222 (1255)
Q Consensus 1166 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ 1222 (1255)
|+++||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.+ ||+|++|++|+
T Consensus 119 p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 119 PDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 999999999999999999999999998764 6899999999999985 99999999985
No 500
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.1e-39 Score=355.47 Aligned_cols=214 Identities=25% Similarity=0.427 Sum_probs=173.5
Q ss_pred EEEEeEEEEcCCCC-CCccccceeEEecCCCEEEEEcCCCCcHHHHHHHHhcccC---CCccEEEECCeecCCCCHHHHh
Q 000846 345 IEFRDVYFCYPSRP-DTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYD---PVEGEVLLDGYKIRRLHLKWLR 420 (1255)
Q Consensus 345 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~---~~~G~i~~~g~~~~~~~~~~~r 420 (1255)
+.++||+++|++.+ .+++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999997542 3579999999999999999999999999999999999999 99999999999875 24568
Q ss_pred cccEEeccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhchHH-HHhcCCCcccchhcCCCCCCChHHHHHHHHHHHh
Q 000846 421 SQMGLVNQEPVLFAT-SITENILFGKDGASMDDVISAAKAANAHD-FITKLPDGYETQVGQLGFQMSGGQKQRIAIARAL 498 (1255)
Q Consensus 421 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~-~i~~l~~g~~t~~~~~g~~LSgGqrqri~lARal 498 (1255)
++++|++|++.+|++ |++||+.++..................++ .+..+ ++.........+||||||||++||||+
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999987 99999987521110000000111111122 33333 454455667789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecCc-hhh-hhcCEEEEEeCCEEEEec
Q 000846 499 IRDPKILLLDEATSALDAQSERIVQEAIDKVS-KGRTTLIIAHRL-STI-RTANLIMVLKAGKVVESG 563 (1255)
Q Consensus 499 ~~~~~illlDEpts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~-~~~-~~~d~i~vl~~G~i~~~g 563 (1255)
+++|++|||||||++||+.+...+.+.++++. +++|+|++||++ +.+ ..||++++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999998874 488999999998 455 569999999999999875
Done!