Query 000846
Match_columns 1255
No_of_seqs 375 out of 4764
Neff 8.4
Searched_HMMs 29240
Date Tue Mar 26 17:48:35 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000846.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_614-618//hhsearch_pdb/000846hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1795.6 123.3 1230 2-1251 60-1319(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1556.4 115.7 1221 2-1251 33-1273(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 853.9 73.1 579 666-1249 57-654 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 782.8 59.5 576 669-1249 33-626 (1284)
5 3qf4_A ABC transporter, ATP-bi 1.0 1 1 739.6 69.2 567 674-1250 14-580 (587)
6 3qf4_B Uncharacterized ABC tra 1.0 1 1 737.3 64.0 571 668-1250 22-592 (598)
7 4a82_A Cystic fibrosis transme 1.0 1 1 734.8 66.6 571 672-1249 3-577 (578)
8 2yl4_A ATP-binding cassette SU 1.0 1 1 720.2 73.4 575 671-1250 7-585 (595)
9 3qf4_A ABC transporter, ATP-bi 1.0 1 1 719.6 72.9 569 3-585 10-579 (587)
10 3qf4_B Uncharacterized ABC tra 1.0 1 1 719.5 65.2 568 3-586 24-592 (598)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1795.63 Aligned_cols=1230 Identities=36% Similarity=0.583 Sum_probs=1045.0
Q ss_pred CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------C------CCCCC----CCHHHHHH
Q ss_conf 7527887300741378999999999997867989999999998630699-------9------88864----01188999
Q 000846 2 GGNDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNP-------S------SSSLS----NDTVDKYT 64 (1255)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~iid~~~~~-------~------~~~~~----~~~~~~~~ 64 (1255)
+++++||||+.++|+++++++++++++.|+..|++++++|+++|.+... . ..... ...+..++
T Consensus 60 v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (1321)
T 4f4c_A 60 VSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVV 139 (1321)
T ss_dssp CCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHH
T ss_pred CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 79999731567678999999999999999999999999999999997010001454300034431001689999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999998199100013667887987999999988999999999999
Q 000846 65 LRLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKI 144 (1255)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~~l~~D~~~i~~~~~~~~ 144 (1255)
+++++++++.+++.|++.+++.++++++..++|.++|++++++|++|||+ +++|++++|+++|++.+++++.+.+
T Consensus 140 ~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~-----~~~G~l~sr~~~D~~~i~~~~~~~l 214 (1321)
T 4f4c_A 140 WSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDT-----NHSGTLATKLFDNLERVKEGTGDKI 214 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH-----TCCTTHHHHHHHHHHHHHHTSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999997889899879-----9848999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 99998999999999999999798999999999999999999999999999999999999999999999119999996006
Q 000846 145 SNTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAE 224 (1255)
Q Consensus 145 ~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e 224 (1255)
+.++..+..++++++++++++|++++++++++|+++++..++.++..+..++.++..+++++.+.|.++|+++||+|++|
T Consensus 215 ~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e 294 (1321)
T 4f4c_A 215 GMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGL 294 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999899999999999999999999999999999999999999999999999839999982142
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999-99999999999999999960897788899999999999999999999
Q 000846 225 HETLIRFSNALQKTMELGIKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALP 303 (1255)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 303 (1255)
+.+.++|.+..++..+...+.....++..+.. .+.++.+++++|+|++++..+.+++|.+++++.++.....++..+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~ 374 (1321)
T 4f4c_A 295 RYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGP 374 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999995998699999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCC
Q ss_conf 99999999999999999852799988897454567876530999958998699999965111038861997999985999
Q 000846 304 NLTAITEAKVAATRIFEMVDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSG 383 (1255)
Q Consensus 304 ~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~sG 383 (1255)
.+..+.++.++++|++++++.+|+.+.....+..+.+..++|+|+||+|+||++++.++|+|+||++++|++++||||||
T Consensus 375 ~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sG 454 (1321)
T 4f4c_A 375 QLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSG 454 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCC
T ss_conf 99999999999999999971785345666556567788876799985540799998743333188622882789980589
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHH
Q ss_conf 81899999996166799638999996168889888724238864677667101899860499999999899999993469
Q 000846 384 SGKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAH 463 (1255)
Q Consensus 384 sGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~ 463 (1255)
||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+||||++||+|||+||+++++++++++||+.++++
T Consensus 455 sGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~ 534 (1321)
T 4f4c_A 455 CGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAE 534 (1321)
T ss_dssp SCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCH
T ss_conf 85778888754565164486157996501125999850466658753320786167886415522099999999875654
Q ss_pred HHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCH
Q ss_conf 99960988520100389998894899999999986129987898277889998979999999998608983999814920
Q 000846 464 DFITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLS 543 (1255)
Q Consensus 464 ~~i~~lp~g~~t~i~~~g~~LSgGqkqri~lARal~~~~~ililDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~ith~~~ 543 (1255)
+||+.||+||+|.|||+|.+||||||||||||||+|++|+|+|||||||+||+++|+.+++++.++.+|+|+|+||||++
T Consensus 535 ~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls 614 (1321)
T 4f4c_A 535 KFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTT
T ss_pred HHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 68870888886075589887777787999999987259998998455446887899999999999847988999736387
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHCCCCCCHHHHHHHHHHHCCCCCCC-CCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 44303989999699898825936886038887459999998620248888-99767762013455421025799987546
Q 000846 544 TIRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVELQQMASENDTS-NDTFNDFSHQMDAINLYKRTIAPSPMSMR 622 (1255)
Q Consensus 544 ~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (1255)
+++.||+|++|++|+|+|+|+|+||++ .+|.|+++++.|......+.. +................. .........
T Consensus 615 ~i~~aD~Iivl~~G~ive~Gth~eL~~--~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 690 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQVVEVGDHRALMA--QQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHE--GLSRQASEM 690 (1321)
T ss_dssp TTTTCSEEEEEETTEEEEEECHHHHHT--TTCHHHHHHHHHHHHHHHHHHHCC---------------------------
T ss_pred HHHHCCEEEEEECCEEECCCCHHHHHH--HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCC
T ss_conf 898689899963996513689999998--5327999999622122223323344332232111222223--422222221
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 77788899899998876799886444479999876-------65335567871389999887213469999999999999
Q 000846 623 SSAASTPALNPFSPALSVGTPYSYTIQYDPDDDSL-------GDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGS 695 (1255)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (1255)
.... ...... ............+.++... .+............++++++.++.|..++++++++.+.
T Consensus 691 ~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 764 (1321)
T 4f4c_A 691 DDIM-----NRVRSS-TIGSITNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIG 764 (1321)
T ss_dssp -------------------------------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHG
T ss_pred CCHH-----HHHHCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1022-----111013-2124567740257775315403899999999707863109999999877899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 77788999999999998832771356543789999999999999999999999999999999999999999999818865
Q 000846 696 GAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIG 775 (1255)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~ 775 (1255)
+.+.+..+++++.+++.+.... .........|.+++++++++..++.++..+.+...+.++..++|.+++++++++|++
T Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ 843 (1321)
T 4f4c_A 765 GFIYPTYSVFFTSFMNVFAGNP-ADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIG 843 (1321)
T ss_dssp GGHHHHHHHHHHHHHHHTSSCS-STTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 9999999999999998751793-455667899999999999999999999999999999999999999998887349933
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54457888689999998339999999998999999999999999999999979899999999999999999999999999
Q 000846 776 WFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSM 855 (1255)
Q Consensus 776 ~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lali~l~~~pl~~~~~~~~~~~~~~~ 855 (1255)
|||.+++++|++++|+++|++.++..++..+..++..++.+++.++++++++|.+++++++.+|+++...+...+.....
T Consensus 844 ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~ 923 (1321)
T 4f4c_A 844 FFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGK 923 (1321)
T ss_dssp STTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred HHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32167888488885025059999999999999999986537777022137868999999998889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998789999870269999831289999999999712699999999999899999999999999999999999
Q 000846 856 AGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGR 935 (1255)
Q Consensus 856 ~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 935 (1255)
..+..+...+......|++.|+++||+|++++.+.+++.+..+...+...+..+...........+..+..++++++|+.
T Consensus 924 ~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 1003 (1321)
T 4f4c_A 924 NVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLA 1003 (1321)
T ss_dssp STTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998889889999996279888614148899999999999999999999999999999999999999999987578
Q ss_pred HHHCCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 98839999899--9999999999999999999999999999999999999980368889999887543335665289987
Q 000846 936 LLTQELITPEH--LFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKN 1013 (1255)
Q Consensus 936 l~~~~~~s~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~ 1013 (1255)
++..+..+.+. ++.++........++..+...+.+++.+..+.+|+.++++.+++.+.... +..+|+..|.|+|+|
T Consensus 1004 lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~g~I~f~n 1081 (1321)
T 4f4c_A 1004 LIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSL--AGEKKKLYGKVIFKN 1081 (1321)
T ss_dssp TTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCC--CSBCCCCCCCEEEEE
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCEEEEEE
T ss_conf 875376542147899999999877889999999999999999999989998607665777667--787888888189998
Q ss_pred EEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCC
Q ss_conf 88988999887541130589728969999959999788999998412689986699899506898988873230888057
Q 000846 1014 VFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQE 1093 (1255)
Q Consensus 1014 Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lr~~i~~V~Q~ 1093 (1255)
|+|+||++++.+||+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++||||
T Consensus 1082 Vsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qd 1161 (1321)
T 4f4c_A 1082 VRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQE 1161 (1321)
T ss_dssp EEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSS
T ss_pred EEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCC
T ss_conf 79857999988212451699889899999899998199999999568638997899999986549999998545998789
Q ss_pred CCCCCCCHHHHHHCCC--CCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 8787322899982399--88798899999999619999970500123423899999994799999999997049988897
Q 000846 1094 PTLFAGTIRENIAYGK--ADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLL 1171 (1255)
Q Consensus 1094 ~~LF~gTIreNl~~g~--~~~~~~~i~~al~~a~l~~~i~~lp~gldt~ige~G~~LSgGQrQrlalARAll~~p~ILiL 1171 (1255)
|+||+|||||||+||. ++++|+++++|++.+++++||.++|+||||.|||+|.+||||||||||||||++|+|+||||
T Consensus 1162 p~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiL 1241 (1321)
T 4f4c_A 1162 PTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLL 1241 (1321)
T ss_dssp CCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEE
T ss_pred CEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 97327239999745499999999999999998298499971767899982388915699999999999999717998999
Q ss_pred ECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf 36678989797999999999860997699981591366412879999598998825977898330396558987111399
Q 000846 1172 DEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQGGS 1251 (1255)
Q Consensus 1172 DEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~~i~~~DrI~vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~~~~ 1251 (1255)
|||||+||++||+.|+++|++.+++||+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|++||+.|...
T Consensus 1242 DEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~--~g~y~~L~~~Q~~e 1319 (1321)
T 4f4c_A 1242 DEATSALDTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE--KGAYYKLTQKQMTE 1319 (1321)
T ss_dssp ESCCCSTTSHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHC--C-------------
T ss_pred ECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHHHC
T ss_conf 6811157899999999999997399989996068999996999999989899998888999849--80999999999850
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1556.38 Aligned_cols=1221 Identities=38% Similarity=0.653 Sum_probs=1041.5
Q ss_pred CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCC-----------CCCHHHHHHH
Q ss_conf 752788730074137899999999999786798999999999863069998-----886-----------4011889999
Q 000846 2 GGNDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSS-----SSL-----------SNDTVDKYTL 65 (1255)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~iid~~~~~~~-----~~~-----------~~~~~~~~~~ 65 (1255)
++++++++|..+.+|++++++++++++.++..|+++++++.++|.+..... ... ....+..+++
T Consensus 33 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1284)
T 3g5u_A 33 VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAY 112 (1284)
T ss_dssp CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 56999998726579999999999999999999999999999999986134443322222211111002446889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999981991000136678879879999999889999999999999
Q 000846 66 RLLYVAIGVGLSAFVEGLCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKIS 145 (1255)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~~l~~D~~~i~~~~~~~~~ 145 (1255)
++++++++.+++.+++.+++.+.+++...++|.++|++++++|++|||+ +++|++++|+++|++.+++.+...+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~-----~~~G~l~sr~~~D~~~i~~~~~~~~~ 187 (1284)
T 3g5u_A 113 YYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV-----HDVGELNTRLTDDVSKINEGIGDKIG 187 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHS-----CCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999998699899756-----88778999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99989999999999999997989999999999999999999999999999999999999999999991199999960069
Q 000846 146 NTLAYLSTFFFCLLFSFILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEH 225 (1255)
Q Consensus 146 ~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~ 225 (1255)
.++..+..+++++++++.++|++++++++.+|+++++..++.++..+..++.++..++.++.+.|.++|+++||+|++|+
T Consensus 188 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~ 267 (1284)
T 3g5u_A 188 MFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQK 267 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999997879999846539
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999-999999999999999999608977888999999999999999999999
Q 000846 226 ETLIRFSNALQKTMELGIKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPN 304 (1255)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 304 (1255)
.+.++|.+..++..+...+.....+...+.. .+.+..+++++|+|++++..+.++.|.++++++++.....++....+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~ 347 (1284)
T 3g5u_A 268 KELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPN 347 (1284)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999929988999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCC
Q ss_conf 99999999999999998527999888974545678765309999589986999999651110388619979999859998
Q 000846 305 LTAITEAKVAATRIFEMVDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGS 384 (1255)
Q Consensus 305 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~sGs 384 (1255)
+..+.++..+++|+.++++.+|+.+.....+..++...+.|+++||+|+|+++++.++|+|+||++++||+++|||||||
T Consensus 348 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGs 427 (1284)
T 3g5u_A 348 IEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGC 427 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCC
T ss_conf 99999999999999999728986776665677777777718999989976999987101254589759988999899999
Q ss_pred CHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHH
Q ss_conf 18999999961667996389999961688898887242388646776671018998604999999998999999934699
Q 000846 385 GKSTTIALLQRFYDPVEGEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHD 464 (1255)
Q Consensus 385 GKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~ 464 (1255)
|||||+++|.|+|+|++|+|.+||.|+++++.+++|++++||+|+|++|++||+|||.+|.++.++++++++|+.+++++
T Consensus 428 GKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~ 507 (1284)
T 3g5u_A 428 GKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYD 507 (1284)
T ss_dssp SHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHH
T ss_conf 79999999807889997389999998775799999865489868875377669999745798999999999999829699
Q ss_pred HHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHH
Q ss_conf 99609885201003899988948999999999861299878982778899989799999999986089839998149204
Q 000846 465 FITKLPDGYETQVGQLGFQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLST 544 (1255)
Q Consensus 465 ~i~~lp~g~~t~i~~~g~~LSgGqkqri~lARal~~~~~ililDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~ith~~~~ 544 (1255)
++..+|+|++|.+||+|.+||||||||++||||++++|+|+|||||||+||+++++.+++.++...+|+|+|+||||+++
T Consensus 508 ~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~ 587 (1284)
T 3g5u_A 508 FIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLST 587 (1284)
T ss_dssp HHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHH
T ss_conf 99746563345014787865999999999999995299989997987777999999999999997399989999407789
Q ss_pred HHHCCEEEEEECCEEEEECCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 43039899996998988259368860388874599999986202488889976776201345542102579998754677
Q 000846 545 IRTANLIMVLKAGKVVESGSHNELMNRGEGGEYYQMVELQQMASENDTSNDTFNDFSHQMDAINLYKRTIAPSPMSMRSS 624 (1255)
Q Consensus 545 ~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (1255)
+..||+|++|++|++++.|+|+|+++. .+.|++++..|....+............. .+ . ........
T Consensus 588 i~~~d~i~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~-----~~~~~~~~ 654 (1284)
T 3g5u_A 588 VRNADVIAGFDGGVIVEQGNHDELMRE--KGIYFKLVMTQTAGNEIELGNEACKSKDE-ID-----N-----LDMSSKDS 654 (1284)
T ss_dssp HTTCSEEEECSSSCCCCEECHHHHHHT--TSHHHHHHHHTC---------------------------------------
T ss_pred HHCCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHHHCCCCCCCCCCCCCCCC-CC-----C-----CCCCCCCC
T ss_conf 974998999989999997889999867--87799999974300221113333332222-23-----4-----43333333
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78889989999887679988644447999987665335567871389999887213469999999999999777889999
Q 000846 625 AASTPALNPFSPALSVGTPYSYTIQYDPDDDSLGDRIDQSSYATPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAY 704 (1255)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (1255)
.. ................. .+ ......+ ...........++++++..+.|+.+.++++++++.+++.+..++
T Consensus 655 ~~--~~~~~~~~~~~~~~~~~----~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 726 (1284)
T 3g5u_A 655 GS--SLIRRRSTRKSICGPHD----QD-RKLSTKE-ALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSV 726 (1284)
T ss_dssp -------------------------------------CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CC--CCCCCCCCCCCCCCCCC----CC-CCCCHHH-HHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32--00034543334456422----33-2110245-55313662589999998451579999999999999999999999
Q ss_pred HHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99999998832771-35654378999999999999999999999999999999999999999999981886554457888
Q 000846 705 CVGSLISIYFRTDK-SEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNT 783 (1255)
Q Consensus 705 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~ 783 (1255)
+++.+++.+..... .........+..++++++++..+..+++.+.+...+.++..++|.+++++++++|++||+.++++
T Consensus 727 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~ 806 (1284)
T 3g5u_A 727 IFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNT 806 (1284)
T ss_dssp HHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCC
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
T ss_conf 99999999855685033677999999999999999999999999999999999999999999999983998887578998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68999999833999999999899999999999999999999997989999999999999999999999999999999999
Q 000846 784 SAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQ 863 (1255)
Q Consensus 784 ~g~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lali~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~ 863 (1255)
+|++++|+++|++.++..++..+..++..++.++..++++++++|.+++++++.+|+++...+...+..+....+..+..
T Consensus 807 ~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 886 (1284)
T 3g5u_A 807 TGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKEL 886 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999999999999999999999996999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99878999987026999983128999999999971269999999999989999999999999999999999998839999
Q 000846 864 KEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELIT 943 (1255)
Q Consensus 864 ~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~s 943 (1255)
........|++.|+++||+|++++.+.+++.+..+...+...+..+..+....+...+..+..++++|+|++++..+.++
T Consensus 887 ~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~ 966 (1284)
T 3g5u_A 887 EGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMT 966 (1284)
T ss_dssp HHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999889999984659999999999999999999999999999999999999999999999999999909806
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC
Q ss_conf 89999999999999999999999999999999999999999803688899998875433356652899878898899988
Q 000846 944 PEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPD 1023 (1255)
Q Consensus 944 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~ 1023 (1255)
.+.++.++....+...++..+......+..+..+.+|+.++++.+++.+...... ..+++..|.|+|+||+|+|+.+++
T Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~-~~~~~~~g~i~~~~v~~~y~~~~~ 1045 (1284)
T 3g5u_A 967 FENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQG-LKPNMLEGNVQFSGVVFNYPTRPS 1045 (1284)
T ss_dssp STTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSC-CCTTTTSCCEEEEEEEBCCSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCEEEEEEEEECCCCCC
T ss_conf 9999999999999999999999999999999999999999983887666655566-545677785799998997799998
Q ss_pred CCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHH
Q ss_conf 75411305897289699999599997889999984126899866998995068989888732308880578787322899
Q 000846 1024 QMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRE 1103 (1255)
Q Consensus 1024 ~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lr~~i~~V~Q~~~LF~gTIre 1103 (1255)
.++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+||.|+++++.+.+|++++||||||.+|++||+|
T Consensus 1046 ~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~e 1125 (1284)
T 3g5u_A 1046 IPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAE 1125 (1284)
T ss_dssp CCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHH
T ss_pred CEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHH
T ss_conf 70020305997699889998899997899999994686789977989999800078999970268987787406666999
Q ss_pred HHHCCCC--CCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH
Q ss_conf 9823998--87988999999996199999705001234238999999947999999999970499888973667898979
Q 000846 1104 NIAYGKA--DARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSV 1181 (1255)
Q Consensus 1104 Nl~~g~~--~~~~~~i~~al~~a~l~~~i~~lp~gldt~ige~G~~LSgGQrQrlalARAll~~p~ILiLDEaTS~LD~~ 1181 (1255)
||.++.+ ..++++++++++.+++++++..+|+||||.+||+|.+||||||||+|||||++++|+|||||||||+||++
T Consensus 1126 Ni~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~ 1205 (1284)
T 3g5u_A 1126 NIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTE 1205 (1284)
T ss_dssp HHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHH
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH
T ss_conf 97466877899999999999983959999727042456117888933899999999999997499999986875557999
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf 7999999999860997699981591366412879999598998825977898330396558987111399
Q 000846 1182 SESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQGGS 1251 (1255)
Q Consensus 1182 te~~I~~~l~~~~~~~TvI~IaHrl~~i~~~DrI~vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~~~~ 1251 (1255)
+++.|++.+++..+|+|+|+||||++++..||||+||++|+++|.|+|++|++. +|.|++||+.|...
T Consensus 1206 ~~~~i~~~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~--~g~y~~l~~~q~~~ 1273 (1284)
T 3g5u_A 1206 SEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQ--KGIYFSMVSVQAGA 1273 (1284)
T ss_dssp HHHHHHHHHHHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHS--CSHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHHHC
T ss_conf 999999999986799989999558799980998999989989997789999847--77799999997613
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=853.92 Aligned_cols=579 Identities=35% Similarity=0.566 Sum_probs=521.1
Q ss_pred CCCHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------------------HHHHHHHHH
Q ss_conf 871389999887213-4699999999999997778899999999999883277------------------135654378
Q 000846 666 YATPSQWRLLKINMP-EWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTD------------------KSEIKSKSR 726 (1255)
Q Consensus 666 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~ 726 (1255)
..+.+++++++|..+ .+..++++++++++.++..|+.+++++.+++.+.... .........
T Consensus 57 ~~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (1321)
T 4f4c_A 57 VNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVM 136 (1321)
T ss_dssp SSCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHH
T ss_pred CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 68779999731567678999999999999999999999999999999997010001454300034431001689999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999998188655445788868999999833999999999899
Q 000846 727 TLSLFFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRM 806 (1255)
Q Consensus 727 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~ 806 (1255)
.+.++++++++..+++.+++.+++.+.+++...++|.+++++++++|++||| ++++|++++|+++|++.++..+...+
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd--~~~~G~l~sr~~~D~~~i~~~~~~~l 214 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFD--TNHSGTLATKLFDNLERVKEGTGDKI 214 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHH--HTCCTTHHHHHHHHHHHHHHTSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999788989987--99848999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCH
Q ss_conf 99999999999999999999798999999999999999999999999999999999999878999987026999983128
Q 000846 807 SLLVQAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQ 886 (1255)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~lali~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~ 886 (1255)
..++..++.++++++++++++|.+++++++.+|+.++......+..++...+.++...+....+.|.+.|+++||+|++|
T Consensus 215 ~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e 294 (1321)
T 4f4c_A 215 GMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGL 294 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999899999999999999999999999999999999999999999999999839999982142
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999997126999999999998999999999999999999999999883999989999999999999999999999
Q 000846 887 KRILGLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGS 966 (1255)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~s~~~l~~~~~~~~~~~~~~~~~~~ 966 (1255)
+.+.++|.+..++..+...+..+..+...+...++..+..++++|+|++++..+.+++|.+++++.+......++..+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~ 374 (1321)
T 4f4c_A 295 RYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGP 374 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999995998699999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCC
Q ss_conf 99999999999999999980368889999887543335665289987889889998875411305897289699999599
Q 000846 967 MTSDISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQS 1046 (1255)
Q Consensus 967 ~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~S 1046 (1255)
....+..+..+.+|+.++++.+++.+...... ..+.+..|.|+|+||+|+||++++.++|+|+||+|++||++||||||
T Consensus 375 ~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~-~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~s 453 (1321)
T 4f4c_A 375 QLAVLGTAQGAASGIYEVLDRKPVIDSSSKAG-RKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSS 453 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCC-CCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECC
T ss_conf 99999999999999999971785345666556-56778887679998554079999874333318862288278998058
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCH
Q ss_conf 99788999998412689986699899506898988873230888057878732289998239988798899999999619
Q 000846 1047 GCGKSTIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANA 1126 (1255)
Q Consensus 1047 GSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lr~~i~~V~Q~~~LF~gTIreNl~~g~~~~~~~~i~~al~~a~l 1126 (1255)
|||||||+++|+|+|+|++|+|.+||+|++++++++||++|+||||||.||+|||||||.+|+|+++++++++||+.+++
T Consensus 454 GsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l 533 (1321)
T 4f4c_A 454 GCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANA 533 (1321)
T ss_dssp SSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf 98577888875456516448615799650112599985046665875332078616788641552209999999987565
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 99997050012342389999999479999999999704998889736678989797999999999860997699981591
Q 000846 1127 HEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRL 1206 (1255)
Q Consensus 1127 ~~~i~~lp~gldt~ige~G~~LSgGQrQrlalARAll~~p~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl 1206 (1255)
+++|+.||+|+||.|||+|.+||||||||||||||++++|+|||||||||+||++||+.++++|+++.+++|+|+||||+
T Consensus 534 ~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrl 613 (1321)
T 4f4c_A 534 EKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRL 613 (1321)
T ss_dssp HHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCT
T ss_pred HHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 46887088888607558988777778799999998725999899845544688789999999999984798899973638
Q ss_pred HHHHHCCEEEEEECCEEEEECCHHHHHHHHCCCHHHHHHHHHC
Q ss_conf 3664128799995989988259778983303965589871113
Q 000846 1207 STIQKSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQG 1249 (1255)
Q Consensus 1207 ~~i~~~DrI~vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~~ 1249 (1255)
+++++||+|+||++|+|+|.|+|+||++. +|.|++||+.|.
T Consensus 614 s~i~~aD~Iivl~~G~ive~Gth~eL~~~--~g~y~~l~~~q~ 654 (1321)
T 4f4c_A 614 STIRNADLIISCKNGQVVEVGDHRALMAQ--QGLYYDLVTAQT 654 (1321)
T ss_dssp TTTTTCSEEEEEETTEEEEEECHHHHHTT--TCHHHHHHHHHH
T ss_pred HHHHHCCEEEEEECCEEECCCCHHHHHHH--HHHHHHHHHHHH
T ss_conf 78986898999639965136899999985--327999999622
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=782.79 Aligned_cols=576 Identities=37% Similarity=0.602 Sum_probs=511.1
Q ss_pred HHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHH
Q ss_conf 38999988721-346999999999999977788999999999998832771-----------------356543789999
Q 000846 669 PSQWRLLKINM-PEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDK-----------------SEIKSKSRTLSL 730 (1255)
Q Consensus 669 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 730 (1255)
..+++++++.. ..|..++++++++++.++..++.+++++.+++.+..... .........+..
T Consensus 33 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1284)
T 3g5u_A 33 VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAY 112 (1284)
T ss_dssp CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 56999998726579999999999999999999999999999999986134443322222211111002446889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999981886554457888689999998339999999998999999
Q 000846 731 FFLGVAVLNFISSLLQHYSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLV 810 (1255)
Q Consensus 731 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~~~~~ 810 (1255)
++++++++..++.+++.+.+...+.+...++|.+++++++++|++||+ .+++|++++|+++|++.++..++..+..++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~--~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~ 190 (1284)
T 3g5u_A 113 YYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFD--VHDVGELNTRLTDDVSKINEGIGDKIGMFF 190 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHH--SCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999869989975--688778999999889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHH
Q ss_conf 99999999999999997989999999999999999999999999999999999998789999870269999831289999
Q 000846 811 QAIFGSVFSYIVGLVLSWRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRIL 890 (1255)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~lali~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~ 890 (1255)
..++.+++.++++++++|.+++++++.+|+++.......+..++..++.++...+...++.|++.|+++||+|++|+.+.
T Consensus 191 ~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~ 270 (1284)
T 3g5u_A 191 QAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKEL 270 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHH
T ss_conf 99999999999999998999999999999999999999999999999999999999999999997879999846539999
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999971269999999999989999999999999999999999998839999899999999999999999999999999
Q 000846 891 GLFKETLRGPKEESLKHSWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSD 970 (1255)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 970 (1255)
++|.+..++..+...+..+..+...+...++..+..++++|+|++++..+.+++|.+++++........++..+...+..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1284)
T 3g5u_A 271 ERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEA 350 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999929988999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCH
Q ss_conf 99999999999999803688899998875433356652899878898899988754113058972896999995999978
Q 000846 971 ISKGSNAVRSVFAILDRRSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGK 1050 (1255)
Q Consensus 971 ~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGK 1050 (1255)
+..+..+.+|+.++++.+++.++...... .+.+..|.|+|+||+|+|+++++.++|+|+||+|++||++||||||||||
T Consensus 351 ~~~~~~a~~ri~~~l~~~~~~~~~~~~~~-~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGK 429 (1284)
T 3g5u_A 351 FANARGAAYEVFKIIDNKPSIDSFSKSGH-KPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGK 429 (1284)
T ss_dssp HHHHHHHHHHHHHTTSCCCCCSSCCSSCC-CCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCH
T ss_conf 99999999999999728986776665677-77777771899998997699998710125458975998899989999979
Q ss_pred HHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHH
Q ss_conf 89999984126899866998995068989888732308880578787322899982399887988999999996199999
Q 000846 1051 STIIGLLERFYDPLKGSVFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFI 1130 (1255)
Q Consensus 1051 STL~~lL~rl~~p~~G~I~idG~di~~~~~~~lr~~i~~V~Q~~~LF~gTIreNl~~g~~~~~~~~i~~al~~a~l~~~i 1130 (1255)
|||+++|+|+|+|++|+|.+||.|+++++.+++|++++||||||.||++||+|||.+|.++.++++++++++.+++++++
T Consensus 430 STl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i 509 (1284)
T 3g5u_A 430 STTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFI 509 (1284)
T ss_dssp HHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
T ss_conf 99999980788999738999999877579999986548986887537766999974579899999999999982969999
Q ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
Q ss_conf 70500123423899999994799999999997049988897366789897979999999998609976999815913664
Q 000846 1131 SGMKDGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQ 1210 (1255)
Q Consensus 1131 ~~lp~gldt~ige~G~~LSgGQrQrlalARAll~~p~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~~i~ 1210 (1255)
..+|+|+||.+||+|.+||||||||+|||||++++|+|||||||||+||+++|+.+++.++...+++|+|+||||++++.
T Consensus 510 ~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~ 589 (1284)
T 3g5u_A 510 MKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVR 589 (1284)
T ss_dssp HHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHT
T ss_pred HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
T ss_conf 74656334501478786599999999999999529998999798777799999999999999739998999940778997
Q ss_pred HCCEEEEEECCEEEEECCHHHHHHHHCCCHHHHHHHHHC
Q ss_conf 128799995989988259778983303965589871113
Q 000846 1211 KSDTIAVIKNGRVVEQGSHNELVALSRGGAYYSLIKPQG 1249 (1255)
Q Consensus 1211 ~~DrI~vl~~G~ive~G~~~eLl~~~~~g~y~~l~~~~~ 1249 (1255)
.||+|+||++|+++|.|+|++|++. ++.|++++..|.
T Consensus 590 ~~d~i~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~~~~ 626 (1284)
T 3g5u_A 590 NADVIAGFDGGVIVEQGNHDELMRE--KGIYFKLVMTQT 626 (1284)
T ss_dssp TCSEEEECSSSCCCCEECHHHHHHT--TSHHHHHHHHTC
T ss_pred CCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHH
T ss_conf 4998999989999997889999867--877999999743
No 5
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=739.62 Aligned_cols=567 Identities=24% Similarity=0.404 Sum_probs=478.4
Q ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98872134699999999999997778899999999999883277135654378999999999999999999999999999
Q 000846 674 LLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSFSVM 753 (1255)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 753 (1255)
++++.++.++.+.+++++.++.+++.+..+++++.+++....... ......+..+++++.++..++.++..+...+.
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (587)
T 3qf4_A 14 LARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGD---FSLVLKTGILMLIVALIGAVGGIGCTVFASYA 90 (587)
T ss_dssp GGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999873698---79999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998188655445788868999999833999999999899999999999999999999997989999
Q 000846 754 GEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRLTLV 833 (1255)
Q Consensus 754 ~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lali 833 (1255)
+.++..++|.++++++++.|+.||+ ++++|++++|+++|++.++..+...+..++...+.++++++++++++|.++++
T Consensus 91 ~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 168 (587)
T 3qf4_A 91 SQNFGADLRRDLFRKVLSFSISNVN--RFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSV 168 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHH--HSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999788979976--58889999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999878999987026999983128999999999971269999999999989
Q 000846 834 MIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWYSGI 913 (1255)
Q Consensus 834 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1255)
+++.+|+++.......+..++..++.++...+......|.+.|+++||+|++++.+.++|.+..++..+...+..+....
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (587)
T 3qf4_A 169 LIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVF 248 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998559999986214999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999999999999999883999989999999999999999999999999999999999999999803688899
Q 000846 914 GLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSEIDP 993 (1255)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~ 993 (1255)
..+...++..+..++++|+|++++..+.+++|.++++..+...+..++..+...+..+..+..+.+|+.++++.+++.++
T Consensus 249 ~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 328 (587)
T 3qf4_A 249 ALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEE 328 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984993899999999999999999999999999999999999999999768976578
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 99887543335665289987889889998875411305897289699999599997889999984126899866998995
Q 000846 994 DSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVFMDEQ 1073 (1255)
Q Consensus 994 ~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~ 1073 (1255)
.... ...++..+.|+++||+|+|+++ ++++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+||+
T Consensus 329 ~~~~--~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~ 405 (587)
T 3qf4_A 329 ADNA--LALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDEL 405 (587)
T ss_dssp CTTC--BCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSS
T ss_pred CCCC--CCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf 8776--5668888807997889984899-976421117998699889998999997999999992786699867989999
Q ss_pred ECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 06898988873230888057878732289998239988798899999999619999970500123423899999994799
Q 000846 1074 DIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQLSGGQK 1153 (1255)
Q Consensus 1074 di~~~~~~~lr~~i~~V~Q~~~LF~gTIreNl~~g~~~~~~~~i~~al~~a~l~~~i~~lp~gldt~ige~G~~LSgGQr 1153 (1255)
|+++++.+++|++++||||+|.+|++|++|||.++.++.++++++++++.+++++++..+|+|+||.++|+|.+||||||
T Consensus 406 ~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqr 485 (587)
T 3qf4_A 406 DVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQK 485 (587)
T ss_dssp BGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHH
T ss_pred ECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHH
T ss_conf 83407899998413897789867675599998524889999999999999684999975653121275189899299999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999999704998889736678989797999999999860997699981591366412879999598998825977898
Q 000846 1154 QRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQGSHNELV 1233 (1255)
Q Consensus 1154 QrlalARAll~~p~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~~i~~~DrI~vl~~G~ive~G~~~eLl 1233 (1255)
||+|||||++++|+|||||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+|+||+
T Consensus 486 Qrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~ 565 (587)
T 3qf4_A 486 QRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELL 565 (587)
T ss_dssp HHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999972999999979754479999999999999867999899982276889819989999899899978899998
Q ss_pred HHHCCCHHHHHHHHHCC
Q ss_conf 33039655898711139
Q 000846 1234 ALSRGGAYYSLIKPQGG 1250 (1255)
Q Consensus 1234 ~~~~~g~y~~l~~~~~~ 1250 (1255)
+. ++.|+++|..|..
T Consensus 566 ~~--~~~~~~~~~~~~~ 580 (587)
T 3qf4_A 566 EH--CKPYREIYESQFG 580 (587)
T ss_dssp HH--CHHHHHHHHHHC-
T ss_pred HC--CCHHHHHHHHHHC
T ss_conf 67--8399999999846
No 6
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=737.30 Aligned_cols=571 Identities=29% Similarity=0.443 Sum_probs=510.3
Q ss_pred CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 13899998872134699999999999997778899999999999883277135654378999999999999999999999
Q 000846 668 TPSQWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQH 747 (1255)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 747 (1255)
...+++++++.++.++.+..++++.++.+++.+..|++++.+++....... ......+...++++.++..++.++..
T Consensus 22 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (598)
T 3qf4_B 22 TATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR---FDLLPRYMLILGTIYALTSLLFWLQG 98 (598)
T ss_dssp HHHHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---GGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999999999999999999999999999999999973688---89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998188655445788868999999833999999999899999999999999999999997
Q 000846 748 YSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLS 827 (1255)
Q Consensus 748 ~~~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (1255)
+.....+.++..++|.++++++++.|++||+ ++++|++++|+++|++.++..+...+..++..++.+++.++++++++
T Consensus 99 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 176 (598)
T 3qf4_B 99 KIMLTLSQDVVFRLRKELFEKLQRVPVGFFD--RTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVN 176 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTHHHH--HSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999779999976--88889999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 98999999999999999999999999999999999999878999987026999983128999999999971269999999
Q 000846 828 WRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKH 907 (1255)
Q Consensus 828 ~~lali~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1255)
|.+++++++.+|+.+.......+..++...+.++...+....+.|.+.|+++||+|++++.+.++|.+..++..+...+.
T Consensus 177 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 256 (598)
T 3qf4_B 177 VILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKA 256 (598)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999997379999974870999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99998999999999999999999999999883999989999999999999999999999999999999999999999803
Q 000846 908 SWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDR 987 (1255)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 987 (1255)
.+..........++..+..++++++|++++..+.+++|.+++++.+...+..++..+...+..+..+..+.+|+.++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 336 (598)
T 3qf4_B 257 QIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDL 336 (598)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985997899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 68889999887543335665289987889889998875411305897289699999599997889999984126899866
Q 000846 988 RSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGS 1067 (1255)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1067 (1255)
+++.+.. .. ...++..+.|+++||+|+|++ ++++|+|+||++++||++|||||||||||||+++|+|+++|++|+
T Consensus 337 ~~~~~~~--~~-~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 411 (598)
T 3qf4_B 337 EEEKDDP--DA-VELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQ 411 (598)
T ss_dssp CCCCCCS--SC-CCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEE
T ss_pred CCCCCCC--CC-CCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEE
T ss_conf 8777777--77-777777771899998997799--986012227998699889998999996999999994585799808
Q ss_pred EEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99899506898988873230888057878732289998239988798899999999619999970500123423899999
Q 000846 1068 VFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQ 1147 (1255)
Q Consensus 1068 I~idG~di~~~~~~~lr~~i~~V~Q~~~LF~gTIreNl~~g~~~~~~~~i~~al~~a~l~~~i~~lp~gldt~ige~G~~ 1147 (1255)
|.+||.|+++++...+|++++||||+|.+|++|++|||.++.+..++++++++++.+++++++..+|+|+||.++|+|.+
T Consensus 412 i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~ 491 (598)
T 3qf4_B 412 ILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGED 491 (598)
T ss_dssp EEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTT
T ss_pred EEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCC
T ss_conf 99999983018899998410899079823246399997447999999999999999697888974645323642278898
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEEC
Q ss_conf 99479999999999704998889736678989797999999999860997699981591366412879999598998825
Q 000846 1148 LSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1148 LSgGQrQrlalARAll~~p~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~~i~~~DrI~vl~~G~ive~G 1227 (1255)
||||||||+|||||++++|+|||||||||+||++++..+++.+++..+++|+|+||||++++..||+|++|++|++++.|
T Consensus 492 LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 571 (598)
T 3qf4_B 492 LSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMG 571 (598)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECS
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999964999999989766799999999999999980899899994277899719989999899999877
Q ss_pred CHHHHHHHHCCCHHHHHHHHHCC
Q ss_conf 97789833039655898711139
Q 000846 1228 SHNELVALSRGGAYYSLIKPQGG 1250 (1255)
Q Consensus 1228 ~~~eLl~~~~~g~y~~l~~~~~~ 1250 (1255)
+|+||++. +|.|++++..|..
T Consensus 572 ~~~~l~~~--~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 572 KHDELIQK--RGFYYELFTSQYG 592 (598)
T ss_dssp CHHHHHHT--TCHHHHHHHHHHG
T ss_pred CHHHHHHC--CCHHHHHHHHHHH
T ss_conf 89999867--8779999999764
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=734.79 Aligned_cols=571 Identities=29% Similarity=0.416 Sum_probs=367.9
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999887213469999999999999777889999999999988327713565437----8999999999999999999999
Q 000846 672 WRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKS----RTLSLFFLGVAVLNFISSLLQH 747 (1255)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~ 747 (1255)
++++++.++.++.++.++++.++.+++.+..++.++.+++.............. ..+...++++.++..++.++..
T Consensus 3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (578)
T 4a82_A 3 KRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQ 82 (578)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988999999999999999999999999999999999981687114677888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998188655445788868999999833999999999899999999999999999999997
Q 000846 748 YSFSVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLS 827 (1255)
Q Consensus 748 ~~~~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (1255)
+...+.+.++..++|.++++++++.|++||+ ++++|++++|+++|++.++..+...+..++..++.++++++++++++
T Consensus 83 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 83 YLAQWTSNKILYDIRKKLYNHLQALSARFYA--NNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH--TSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999878999976--89869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 98999999999999999999999999999999999999878999987026999983128999999999971269999999
Q 000846 828 WRLTLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKH 907 (1255)
Q Consensus 828 ~~lali~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1255)
|.+++++++.+|+.+.......+..++..++..+...+......|.+.|+++||+|++++.+.++|.+..++..+...+.
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99998999999999999999999999999883999989999999999999999999999999999999999999999803
Q 000846 908 SWYSGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDR 987 (1255)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 987 (1255)
.+...........+..+..++++++|++++..+.+++|.++++..+...+..++..+...+..+..+..+.+|+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 68889999887543335665289987889889998875411305897289699999599997889999984126899866
Q 000846 988 RSEIDPDSPQGRDIKRQMRGRIELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGS 1067 (1255)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1067 (1255)
+++.+..... ...++..+.|+++||+|+|+++ ++++|+|+||++++||++|||||||||||||+++|.|+++|++|+
T Consensus 321 ~~~~~~~~~~--~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 397 (578)
T 4a82_A 321 DYDIKNGVGA--QPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQ 397 (578)
T ss_dssp CCSSCCCTTC--CCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEE
T ss_pred CCCCCCCCCC--CCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 9766678776--6667778807999999975899-974134337998799999998999985999999984678899967
Q ss_pred EEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99899506898988873230888057878732289998239988798899999999619999970500123423899999
Q 000846 1068 VFMDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKADARESEIKKAAVLANAHEFISGMKDGYDTYCGERGVQ 1147 (1255)
Q Consensus 1068 I~idG~di~~~~~~~lr~~i~~V~Q~~~LF~gTIreNl~~g~~~~~~~~i~~al~~a~l~~~i~~lp~gldt~ige~G~~ 1147 (1255)
|.+||.|+++++..++|++++||||+|.+|++|++||+.+|.++.++++++++++.+++++++..+|+|+||.+||+|.+
T Consensus 398 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~ 477 (578)
T 4a82_A 398 ILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVK 477 (578)
T ss_dssp EEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTT
T ss_pred EEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCC
T ss_conf 99999984427899996006899289834764599998527999889999999988095999975733010253068896
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEEC
Q ss_conf 99479999999999704998889736678989797999999999860997699981591366412879999598998825
Q 000846 1148 LSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQG 1227 (1255)
Q Consensus 1148 LSgGQrQrlalARAll~~p~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~~i~~~DrI~vl~~G~ive~G 1227 (1255)
||||||||++||||++++|++++||||||+||+++++.+++.+++..+++|+|+||||+++++.||+|++|++|++++.|
T Consensus 478 LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 557 (578)
T 4a82_A 478 LSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557 (578)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999974999999978654579999999999999980899799983178999719989999899899988
Q ss_pred CHHHHHHHHCCCHHHHHHHHHC
Q ss_conf 9778983303965589871113
Q 000846 1228 SHNELVALSRGGAYYSLIKPQG 1249 (1255)
Q Consensus 1228 ~~~eLl~~~~~g~y~~l~~~~~ 1249 (1255)
+|+||++. ++.|+++|+.|.
T Consensus 558 ~~~el~~~--~~~~~~~~~~q~ 577 (578)
T 4a82_A 558 THRELIAK--QGAYEHLYSIQN 577 (578)
T ss_dssp CHHHHHHT--TSHHHHHHTTTT
T ss_pred CHHHHHHC--CCHHHHHHHHHC
T ss_conf 89999858--838999998506
No 8
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=720.15 Aligned_cols=575 Identities=32% Similarity=0.475 Sum_probs=441.6
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998872134699999999999997778899999999999883277135654378999999999999999999999999
Q 000846 671 QWRLLKINMPEWGSALLGCIASIGSGAVQPINAYCVGSLISIYFRTDKSEIKSKSRTLSLFFLGVAVLNFISSLLQHYSF 750 (1255)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 750 (1255)
.++++++..+.++.+..++++.++.+++.+..+++++.+++................+...++++.++..++.++..+..
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (595)
T 2yl4_A 7 ARKLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLM 86 (595)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998878999999999999999999999999999999997357402667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998188655445788868999999833999999999899999999999999999999997989
Q 000846 751 SVMGEKLTKRVREKLLGKLMTFEIGWFDQEDNTSAAICARLATEANVVRSLVGDRMSLLVQAIFGSVFSYIVGLVLSWRL 830 (1255)
Q Consensus 751 ~~~~~~~~~~l~~~~~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 830 (1255)
...+.++..++|.++++++++.|++||+ ++++|++++|+++|++.++..+...+..++..++.+++.++++++++|.+
T Consensus 87 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 164 (595)
T 2yl4_A 87 QTSGQRIVNRLRTSLFSSILRQEVAFFD--KTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNL 164 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHH--HSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999819999977--79848899999999999999999999999999999999999999981999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999878999987026999983128999999999971269999999999
Q 000846 831 TLVMIAVQPLVIGSYYSRNVLMKSMAGKARKAQKEGSQLASEAVINHRTITAFSSQKRILGLFKETLRGPKEESLKHSWY 910 (1255)
Q Consensus 831 ali~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tIr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1255)
++++++.+|+.+.......+..++..++.++...+....+.|.+.|+++||+|++++.+.++|.+..++..+...+..+.
T Consensus 165 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 244 (595)
T 2yl4_A 165 ATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFA 244 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998119999983756999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 98999999999999999999999999883999989999999999999999999999999999999999999999803688
Q 000846 911 SGIGLFSSQFFNTASTALAYWYGGRLLTQELITPEHLFQAFLILLFTAYVIAEAGSMTSDISKGSNAVRSVFAILDRRSE 990 (1255)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 990 (1255)
.........++..+..++++++|++++..+.+++|.++++..+...+..++..+......+..+..+.+|+.++++.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 324 (595)
T 2yl4_A 245 RAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPK 324 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999986997899999999999999999999999999999999999999999838976
Q ss_pred CCCCCCCCCCCCCCCCCC-EEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 899998875433356652-8998788988999887541130589728969999959999788999998412689986699
Q 000846 991 IDPDSPQGRDIKRQMRGR-IELKNVFFAYPTRPDQMILKGLSLKIEAGKTVALVGQSGCGKSTIIGLLERFYDPLKGSVF 1069 (1255)
Q Consensus 991 ~~~~~~~~~~~~~~~~g~-I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1069 (1255)
.+... ...++.+..+. |+++||+|+|+++++.++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.
T Consensus 325 ~~~~~--~~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~ 402 (595)
T 2yl4_A 325 LPFNE--GVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTIS 402 (595)
T ss_dssp SCSSC--SBCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEE
T ss_pred CCCCC--CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 67777--8777767899838999889985899888120112799849988999899999799999998258578983799
Q ss_pred ECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCC---CCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 899506898988873230888057878732289998239988---79889999999961999997050012342389999
Q 000846 1070 MDEQDIRNYNLKQLRSHIALVSQEPTLFAGTIRENIAYGKAD---ARESEIKKAAVLANAHEFISGMKDGYDTYCGERGV 1146 (1255)
Q Consensus 1070 idG~di~~~~~~~lr~~i~~V~Q~~~LF~gTIreNl~~g~~~---~~~~~i~~al~~a~l~~~i~~lp~gldt~ige~G~ 1146 (1255)
+||.|+++++...+|++++||||+|.+|++|++|||.++.+. .++++++++++.++++++++.+|+|+||.+||+|.
T Consensus 403 ~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~ 482 (595)
T 2yl4_A 403 LDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGV 482 (595)
T ss_dssp ETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSC
T ss_pred ECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 99998111799999732289836883268779999840587766568999999999869799997473201350168878
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEE
Q ss_conf 99947999999999970499888973667898979799999999986099769998159136641287999959899882
Q 000846 1147 QLSGGQKQRIALARAILKNPSILLLDEATSALDSVSESLVQEALEKMMMGRTCVVVAHRLSTIQKSDTIAVIKNGRVVEQ 1226 (1255)
Q Consensus 1147 ~LSgGQrQrlalARAll~~p~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~~i~~~DrI~vl~~G~ive~ 1226 (1255)
+||||||||++||||++++|+|+|||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|++++.
T Consensus 483 ~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 562 (595)
T 2yl4_A 483 LLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEY 562 (595)
T ss_dssp CCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 68999999999999997599999998866689989999999999999659979999468789975998999989989997
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHCC
Q ss_conf 597789833039655898711139
Q 000846 1227 GSHNELVALSRGGAYYSLIKPQGG 1250 (1255)
Q Consensus 1227 G~~~eLl~~~~~g~y~~l~~~~~~ 1250 (1255)
|+|++|++. +++.|+++++.|..
T Consensus 563 g~~~~l~~~-~~~~~~~~~~~q~~ 585 (595)
T 2yl4_A 563 GKHEELLSK-PNGIYRKLMNKQSF 585 (595)
T ss_dssp ECSCC-------C-----------
T ss_pred CCHHHHHHC-CCHHHHHHHHHHHC
T ss_conf 889999747-87299999997430
No 9
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=719.63 Aligned_cols=569 Identities=27% Similarity=0.374 Sum_probs=502.5
Q ss_pred CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 52788730074137899999999999786798999999999863069998886401188999999999999999999999
Q 000846 3 GNDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEG 82 (1255)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (1255)
.++++++|.+++++ .+++++++.++.++..+..+++++.++|......+ . .....+.+.++++.++..++.++..
T Consensus 10 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (587)
T 3qf4_A 10 GSKTLARYLKPYWI-FAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGD---F-SLVLKTGILMLIVALIGAVGGIGCT 84 (587)
T ss_dssp CCCCGGGGTGGGHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---H-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---H-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 49999999999999-99999999999999999999999999999873698---7-9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998199100013667887987999999988999999999999999989999999999999
Q 000846 83 LCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSF 162 (1255)
Q Consensus 83 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~~l~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 162 (1255)
++..+.+.+...++|.++|++++++|+.+|++ .++|++++|+++|++.+++.+...+..++..++.+++++++++
T Consensus 85 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~-----~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~ 159 (587)
T 3qf4_A 85 VFASYASQNFGADLRRDLFRKVLSFSISNVNR-----FHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAV 159 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH-----SCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997889799765-----8889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99798999999999999999999999999999999999999999999999119999996006999999999999999999
Q 000846 163 ILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELG 242 (1255)
Q Consensus 163 ~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~ 242 (1255)
.++|.+++++++.+|+++++..++.++..+..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+..
T Consensus 160 ~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 239 (587)
T 3qf4_A 160 SINVKLSSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSI 239 (587)
T ss_dssp HHCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99899999999999999999999999999999999999999999999998559999986214999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999-99999999999999999960897788899999999999999999999999999999999999998
Q 000846 243 IKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEM 321 (1255)
Q Consensus 243 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~ 321 (1255)
.+.....+...+.. .+.....++++|+|++++..+.++.|.++++..+......++..+...+..+.++..+.+|+.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~ 319 (587)
T 3qf4_A 240 ISAFSLIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEV 319 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999984993899999999999999999999999999999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 52799988897454567876530999958998699999965111038861997999985999818999999961667996
Q 000846 322 VDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVE 401 (1255)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 401 (1255)
++.+++.+.... ....+...+.|+++|++|+|+.. +.++|+|+||++++||+++|+||||||||||+++|.|+++|++
T Consensus 320 l~~~~~~~~~~~-~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~ 397 (587)
T 3qf4_A 320 LNEKPAIEEADN-ALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPER 397 (587)
T ss_dssp HHCCCSCCCCTT-CBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSE
T ss_pred HCCCCCCCCCCC-CCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 768976578877-65668888807997889984899-9764211179986998899989999979999999927866998
Q ss_pred CEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCHHCCCC
Q ss_conf 38999996168889888724238864677667101899860499999999899999993469999609885201003899
Q 000846 402 GEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLG 481 (1255)
Q Consensus 402 G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~i~~~g 481 (1255)
|+|.+||.|+++++.+++|++++||+|+|++|++||+|||.++.++.+++++.++++.++++++++.+|+|++|.++++|
T Consensus 398 G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~ 477 (587)
T 3qf4_A 398 GRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGG 477 (587)
T ss_dssp EEEEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSS
T ss_pred CEEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCC
T ss_conf 67989999834078999984138977898676755999985248899999999999996849999756531212751898
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEE
Q ss_conf 98894899999999986129987898277889998979999999998608983999814920443039899996998988
Q 000846 482 FQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVE 561 (1255)
Q Consensus 482 ~~LSgGqkqri~lARal~~~~~ililDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~ 561 (1255)
.+||||||||++||||++++|+|++||||||+||+++++.+++.++++.+++|+|+||||++.+..||+|++|++|++++
T Consensus 478 ~~LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~ 557 (587)
T 3qf4_A 478 RNFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAG 557 (587)
T ss_dssp CSSCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEE
T ss_conf 99299999999999999729999999797544799999999999998679998999822768898199899998998999
Q ss_pred ECCHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 259368860388874599999986
Q 000846 562 SGSHNELMNRGEGGEYYQMVELQQ 585 (1255)
Q Consensus 562 ~g~~~~l~~~~~~~~~~~~~~~~~ 585 (1255)
.|+|+|++++ .+.|.+++..|.
T Consensus 558 ~g~~~el~~~--~~~~~~~~~~~~ 579 (587)
T 3qf4_A 558 FGTHKELLEH--CKPYREIYESQF 579 (587)
T ss_dssp EECHHHHHHH--CHHHHHHHHHHC
T ss_pred ECCHHHHHHC--CCHHHHHHHHHH
T ss_conf 7889999867--839999999984
No 10
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=719.49 Aligned_cols=568 Identities=30% Similarity=0.456 Sum_probs=504.3
Q ss_pred CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 52788730074137899999999999786798999999999863069998886401188999999999999999999999
Q 000846 3 GNDGLFRYADGKDKLLMLFGTIGSIGDGMQYPLMVFVLSFVINDYGNPSSSSLSNDTVDKYTLRLLYVAIGVGLSAFVEG 82 (1255)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (1255)
.++++++|.+++ +..+++++++.++.++..+..+++++.++|.+....+ . ..+..+++.++++.++..++.+++.
T Consensus 24 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (598)
T 3qf4_B 24 TLRRLLGYLRPH-TFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR--F--DLLPRYMLILGTIYALTSLLFWLQG 98 (598)
T ss_dssp HHHHHGGGTGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC--G--GGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--H--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999-9999999999999999999999999999999973688--8--9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998199100013667887987999999988999999999999999989999999999999
Q 000846 83 LCWTRTAERQTSRMRMEYLKSVLRQEVGFFDTQEQGSSTTFQVVSTISNDSNSIQVAICEKISNTLAYLSTFFFCLLFSF 162 (1255)
Q Consensus 83 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f~~~~~g~~~~g~l~~~l~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 162 (1255)
++..+.+.+...++|.++|++++++|++||++ .++|++++|+++|++.+++.+...+..++..+..+++++++++
T Consensus 99 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~-----~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~ 173 (598)
T 3qf4_B 99 KIMLTLSQDVVFRLRKELFEKLQRVPVGFFDR-----TPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMF 173 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTHHHHH-----SCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997799999768-----8889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99798999999999999999999999999999999999999999999999119999996006999999999999999999
Q 000846 163 ILSWRLSLAALPLTLMFIVPGLLFGKLMMGVIMKMIESYGVAGGIAEQAVSSIRTVYSYVAEHETLIRFSNALQKTMELG 242 (1255)
Q Consensus 163 ~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~ 242 (1255)
.++|.++++.++.+|+++++..++.++..+..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+..
T Consensus 174 ~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 253 (598)
T 3qf4_B 174 RVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVG 253 (598)
T ss_dssp HHCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99899999999999999999999999999999999999999999999997379999974870999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999-99999999999999999960897788899999999999999999999999999999999999998
Q 000846 243 IKQGFIKGLLMGSM-GMIYVGWAFQAWVGSYLVTEKGEKGGSIFVAGVSIIMGGLSVLGALPNLTAITEAKVAATRIFEM 321 (1255)
Q Consensus 243 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~ 321 (1255)
.+.....+...+.. .+.....++++++|++++..+.++.|.+++++.+......++..+...+..+.++..+++|+.++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~ 333 (598)
T 3qf4_B 254 TKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEI 333 (598)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999985997899999999999999999999999999999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 52799988897454567876530999958998699999965111038861997999985999818999999961667996
Q 000846 322 VDRTPAIDTDDKMGKALSYVRGEIEFRDVYFCYPSRPDTLVLQGLNLRVPAGKSVGLVGGSGSGKSTTIALLQRFYDPVE 401 (1255)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 401 (1255)
++.+++.+.. ...+.++..+.|+++|++|+|+. +.++|+|+||++++|++++|+||||||||||+++|.|+++|++
T Consensus 334 l~~~~~~~~~--~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~ 409 (598)
T 3qf4_B 334 LDLEEEKDDP--DAVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDR 409 (598)
T ss_dssp TTSCCCCCCS--SCCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSE
T ss_pred HCCCCCCCCC--CCCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 7688777777--77777777771899998997799--9860122279986998899989999969999999945857998
Q ss_pred CEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCHHCCCC
Q ss_conf 38999996168889888724238864677667101899860499999999899999993469999609885201003899
Q 000846 402 GEVLLDGYKIRRLHLKWLRSQMGLVNQEPVLFATSITENILFGKDGASMDDVISAAKAANAHDFITKLPDGYETQVGQLG 481 (1255)
Q Consensus 402 G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~i~~~g 481 (1255)
|+|.+||.|+++++.+++|++++||+|+|++|++||+|||.++.++.+++++.++++.++++++++.+|+|++|.+|++|
T Consensus 410 G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g 489 (598)
T 3qf4_B 410 GQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNG 489 (598)
T ss_dssp EEEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHH
T ss_pred EEEEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCC
T ss_conf 08999999830188999984108990798232463999974479999999999999996978889746453236422788
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEE
Q ss_conf 98894899999999986129987898277889998979999999998608983999814920443039899996998988
Q 000846 482 FQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQEAIDKVSKGRTTLIIAHRLSTIRTANLIMVLKAGKVVE 561 (1255)
Q Consensus 482 ~~LSgGqkqri~lARal~~~~~ililDe~ts~lD~~~~~~i~~~i~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~ 561 (1255)
.+||||||||++||||++++|+|++||||||+||++++..+++.+.++.+|+|+|+|||+++.+..||+|++|++|++++
T Consensus 490 ~~LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 569 (598)
T 3qf4_B 490 EDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVE 569 (598)
T ss_dssp TTSCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEE
T ss_conf 98799999999999999649999999897667999999999999999808998999942778997199899998999998
Q ss_pred ECCHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 2593688603888745999999862
Q 000846 562 SGSHNELMNRGEGGEYYQMVELQQM 586 (1255)
Q Consensus 562 ~g~~~~l~~~~~~~~~~~~~~~~~~ 586 (1255)
.|+|+|++++ ++.|++++..|..
T Consensus 570 ~g~~~~l~~~--~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 570 MGKHDELIQK--RGFYYELFTSQYG 592 (598)
T ss_dssp CSCHHHHHHT--TCHHHHHHHHHHG
T ss_pred ECCHHHHHHC--CCHHHHHHHHHHH
T ss_conf 7789999867--8779999999764
Done!