Your job contains 1 sequence.
>000848
MNNNNNNNSSSTPNPNANTNNKDSEEDLAAQPVETVIKPDKSDTLSSAAAAEEEASAKSD
DPMDEDSVTPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARI
PSSNANTPFWIPIHIVIPERPTECAVFNVIADCPRDSVQFIEWSPTSCPRALLIANFYGR
VTIWTQPSHGPANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSTSPLNAKSI
FEEKFLSQNSQTSDRWPNFLCVCSVFSSGSVQLNWSQWPPSQNGAASKWFPTAKGLLGAG
PSGIMAADVIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQAAPKTTTSNGVPPSLS
PPKWAGFAPLAAYLFSWQEYLLSEAKQGRKLTDQNFSDAITLHCSPVSNFSAYVSPEAAA
QSAATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSVQ
PVVLHQIFGNPTSSFGGQAPMQTVWVSKVDTSIPTSNFKIHQLAAAGPTCDVWKTTDSGL
EKSKIVSFDPFDLPSDIRSLARIVYSAHGGEIAIALLRGGVHIFSGPNFAPVDNYQISVG
SAIAAPAFSSTSCCSASVWHDTNKDRTILKIIRVLPPAVPSSQVKANSSTWERAIAERFW
WSLLVNVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPSIQHRQQYGPSLDRIKCR
LLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPDPWQASGETLSGIDPEAM
AVEPALVASIQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVASPTQS
SATPAASQAGQSGTTSSTGSTQMQAWVQGAIAKISSTNDGVSNPTSNPISGPSSFMPISI
NTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRAQQPRLLANAQRNNDANVQKPQVSA
PGKVEEINSVPGKPTSAMVKLDEGQVARAGQTVPGAKGVEEGPAGRPKMGFGNAGQGYTF
EEVKVLFLILMDLCRRTAALSHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHM
QNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDVGPVDDTPKLSNWVDSV
DVNSSGNHDVYYDSHGLWPRKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVWKTG
LEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWAFGCPMCGGTWVRVV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000848
(1255 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2135383 - symbol:SFR6 "AT4G04920" species:3702... 4762 0. 1
DICTYBASE|DDB_G0279157 - symbol:med16 "putative mediator ... 99 8.6e-05 3
>TAIR|locus:2135383 [details] [associations]
symbol:SFR6 "AT4G04920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009631 "cold acclimation"
evidence=IMP] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0032922 "circadian regulation of gene expression"
evidence=IMP] [GO:0048586 "regulation of long-day photoperiodism,
flowering" evidence=IMP] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016926 "protein desumoylation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] [GO:0071555 "cell wall
organization" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0010104 "regulation
of ethylene mediated signaling pathway" evidence=IMP] [GO:1901672
"positive regulation of systemic acquired resistance" evidence=IMP]
[GO:2000022 "regulation of jasmonic acid mediated signaling
pathway" evidence=IMP] EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 EMBL:AL161502 GO:GO:0006351 GO:GO:0006970
GO:GO:0032922 GO:GO:0016592 IPI:IPI00526565 IPI:IPI00992086
PIR:H85061 RefSeq:NP_001190676.1 RefSeq:NP_192401.5
UniGene:At.21855 PRIDE:F4JGZ1 EnsemblPlants:AT4G04920.1
GeneID:825831 KEGG:ath:AT4G04920 TAIR:At4g04920 eggNOG:NOG238605
InParanoid:Q9M0Y7 OMA:SWQCEHE ArrayExpress:F4JGZ1 GO:GO:1901672
GO:GO:0010104 GO:GO:2000022 GO:GO:0048586 Uniprot:F4JGZ1
Length = 1278
Score = 4762 (1681.4 bits), Expect = 0., P = 0.
Identities = 914/1215 (75%), Positives = 993/1215 (81%)
Query: 59 SDDPMDEDSVTPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCA 118
S M+ D V+PATVFC++LKQP SNL HKMSVPELCRNFSAVAWCGKLNAIACASETCA
Sbjct: 73 SSSNMEIDPVSPATVFCVKLKQPNSNLLHKMSVPELCRNFSAVAWCGKLNAIACASETCA 132
Query: 119 RIPSSNANTPFWIPIHIVIPERPTECAVFNVIADCPRDSVQFIEWSPTSCPRALLIANFY 178
RIPSS ANTPFWIPIHI+IPERPTECAVFNV+AD PRDSVQFIEWSPTSCPRALLIANF+
Sbjct: 133 RIPSSKANTPFWIPIHILIPERPTECAVFNVVADSPRDSVQFIEWSPTSCPRALLIANFH 192
Query: 179 GRVTIWTQPSHGPANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSTSPLNAK 238
GR+TIWTQP+ G ANLV DA+ WQ EHEWRQDIAVVTKWL+G SPYRWLSSK +S NAK
Sbjct: 193 GRITIWTQPTQGSANLVHDATSWQCEHEWRQDIAVVTKWLTGASPYRWLSSKPSSGTNAK 252
Query: 239 SIFEEKFLSQNSQTSDRWPNFLCVCSVFSSGSVQLNWSQWPPSQNGAASKWFPTAKGLLG 298
S FEEKFLSQ+S++S RWPNFLCVCSVFSSGSVQ++WSQWP +Q A KWF T KGLLG
Sbjct: 253 STFEEKFLSQSSESSARWPNFLCVCSVFSSGSVQIHWSQWPSNQGSTAPKWFSTKKGLLG 312
Query: 299 AGPSGIMAADVIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQAAPKTTTSNGVPPS 358
AGPSGIMAAD IITDSGAMHVAGVPIVNPST+VVWEVTPGPGNG QA PK +T + VPPS
Sbjct: 313 AGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGLQATPKISTGSRVPPS 372
Query: 359 LSPPKWAGFAPLAAYLFSWQEYLLSEAKQGRKLTDQNFSDAITLHCSPVSNFSAYVSPEA 418
LS W GFAPLAAYLFSWQEYL+SE KQG+K +DQ+ SDAI+L CSPVSNFSAYVSPEA
Sbjct: 373 LSSSSWTGFAPLAAYLFSWQEYLISEIKQGKKPSDQDSSDAISLSCSPVSNFSAYVSPEA 432
Query: 419 AAQSAATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESS 478
AAQSAATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESS
Sbjct: 433 AAQSAATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESS 492
Query: 479 VQPVVLHQIFGNPTSSFGGQAPMQTVWVSKVDTSIP-TSNFKIHQLAAAGPTCDVWKTTD 537
VQPVVLHQIFGNPTS+FGGQ P QTVWVS+VD SIP T +FK HQ+AAAGP+ D K D
Sbjct: 493 VQPVVLHQIFGNPTSNFGGQVPTQTVWVSRVDMSIPPTKDFKNHQVAAAGPSVDAPKEPD 552
Query: 538 SGLEKSKIVSFDPFDLPSDIRSLARIVYSAHGGEIAIALLRGGVHIFSGPNFAPVDNYQI 597
SG EK+ V FDPFDLPSDIR+LARIVYSAHGGEIAIA LRGGVHIFSGP F+PV+NYQI
Sbjct: 553 SGDEKANKVVFDPFDLPSDIRTLARIVYSAHGGEIAIAFLRGGVHIFSGPTFSPVENYQI 612
Query: 598 SVGSAIAAPAFSSTSCCSASVWHDTNKDRTILKIIRVLPPAVPSSQVKANSSTWERAIAE 657
+VGSAIAAPAFS TSCCSASVWHD KD +LKIIRVLPPA+P +Q K + STWERAIAE
Sbjct: 613 NVGSAIAAPAFSPTSCCSASVWHDAAKDCAMLKIIRVLPPALPRNQSKVDQSTWERAIAE 672
Query: 658 RFWWSLLVNVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPSIQHRQQYGPSLDRI 717
RFWWSLLV VDWWDAVGCTQSAAEDGIVSLNSVIAV+DADFHSLPS QHRQQYGP+LDRI
Sbjct: 673 RFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVMDADFHSLPSTQHRQQYGPNLDRI 732
Query: 718 KCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPDPWQASGETLSGIDP 777
KCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESAL+NPSALV +PW+ GET++GI+P
Sbjct: 733 KCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALVNPSALVFEPWRVDGETITGINP 792
Query: 778 EAMAVEPALVASIQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVXXX 837
EAMAV+PALV+SIQAYVDAVLDLASHFITRLRRYASFCRTLASHA +AGTGSNRN V
Sbjct: 793 EAMAVDPALVSSIQAYVDAVLDLASHFITRLRRYASFCRTLASHAASAGTGSNRNNVTSP 852
Query: 838 XXXXXXXXX-----------------XXXXXXXXXXXXXXXXXXXWVQGAIAKISSTNDG 880
W+QGAIAKISS+NDG
Sbjct: 853 TQNASSPATPQVFPDKSLYLAVGQPTTTTTTTATTNSSGSSHVQAWMQGAIAKISSSNDG 912
Query: 881 VSNPTSNPISGPSSFMPISINTGTFPGTPAVRLIGDXXXXXXXXXXXXXXXXXXXXXXPR 940
SN T++PISG +FMPISINTGTFPGTPAVRLIGD P
Sbjct: 913 -SNSTASPISGSPTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFLQRSSRFP- 970
Query: 941 LLANAQRNNDANVQKPQVSAPGKVEEINSVPGKPTSAMVKLDEGQVARAGQTVPGAKGVE 1000
QRN D + QK Q A K+EE+NS KPT A+ ++++ Q R Q G KG++
Sbjct: 971 -----QRNADVSSQKLQTGATSKLEEVNSA--KPTPALNRIEDAQGFRGAQLGTGVKGID 1023
Query: 1001 EGPAGRPKMGFGNAGQGYTFEEVKVLFLILMDLCRRTAALSHPLPVSQVGSSNIQVRLHY 1060
E A KMG GNAGQGYT+EEV+VLF ILMDLC+RT+ L+HPLP SQVGS NIQVRLHY
Sbjct: 1024 ENSARTTKMGSGNAGQGYTYEEVRVLFHILMDLCKRTSGLAHPLPGSQVGSGNIQVRLHY 1083
Query: 1061 IDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSD 1120
IDGNYTVLPEVVEA+LGPHMQNMPRPRGADAAGLLLRELELHPP+EEWHRRN+FGGP S+
Sbjct: 1084 IDGNYTVLPEVVEAALGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNLFGGPGSE 1143
Query: 1121 PEDVGPVDDTPKLXXXXXXXXXXXXXXXXXYYDSHGLWPRKRRMSERDAAFGLNTSVGLG 1180
PED+ DD KL Y H LWPRKRRMSERDAAFG NTSVGLG
Sbjct: 1144 PEDMILTDDVSKLSNSLDLPDTNFSGICDGYNRVHSLWPRKRRMSERDAAFGSNTSVGLG 1203
Query: 1181 AYLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRW 1240
AYLGIMGSRRDVVTA WKTGLEGVWYKCIRCLRQT+AFASPGAT PN N+RE WW SRW
Sbjct: 1204 AYLGIMGSRRDVVTATWKTGLEGVWYKCIRCLRQTSAFASPGATKQPNPNERETWWTSRW 1263
Query: 1241 AFGCPMCGGTWVRVV 1255
+ CPMCGGTWVRVV
Sbjct: 1264 VYCCPMCGGTWVRVV 1278
>DICTYBASE|DDB_G0279157 [details] [associations]
symbol:med16 "putative mediator complex subunit 16"
species:44689 "Dictyostelium discoideum" [GO:0016592 "mediator
complex" evidence=ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279157 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GenomeReviews:CM000152_GR
GO:GO:0006366 EMBL:AAFI02000027 GO:GO:0016592 RefSeq:XP_641853.2
EnsemblProtists:DDB0266902 GeneID:8621898 KEGG:ddi:DDB_G0279157
eggNOG:NOG319671 OMA:RIVSGME Uniprot:Q54X75
Length = 1284
Score = 99 (39.9 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 647 NSSTWERAIAERFWWSLLVNVDWWDAVGCTQ--SAAEDGIVSLNSVIAVLDADFHSLPSI 704
N + +A+ F S+L + DWWD + + S + D + + I L +DF LP +
Sbjct: 724 NQKVVSKWLAQLFQNSMLKSNDWWDILILLKIYSTSPDTRTTFHHTIIHLSSDFSCLP-L 782
Query: 705 QHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPDP 764
+Q Y D IK + + EV A V D QA+ + L ++S+ +P + P
Sbjct: 783 TFQQTYRHCFDAIKASIYRIVSGMEV-AFV-DSQAKSFIYYLCDTLKSSF-SPLLMQPSQ 839
Query: 765 WQASGET 771
Q+ G T
Sbjct: 840 -QSDGTT 845
Score = 88 (36.0 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 1182 YLGIMGSRRDVVTAV-WKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRW 1240
Y+GI+ D++T + ++ + KCIRC R T + +W RW
Sbjct: 1133 YMGIV---HDIITRIPIAPRIDKPYKKCIRCHRITVMLRT------------SMFWSDRW 1177
Query: 1241 AFGCPMCGGTW 1251
+ CP+CGG W
Sbjct: 1178 SMACPICGGKW 1188
Score = 51 (23.0 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 24/92 (26%), Positives = 38/92 (41%)
Query: 133 IHIVIPERPTECAVFNVIADCPRDSVQFIEWSPTSCPRALLIANFYGRVTIWTQPSHGPA 192
I+I E P E + VI +S++ +EWS S LL + ++ +W
Sbjct: 171 IYITRVEYPHE---YVVIKTSHTNSIKCLEWSTQSPSNLLLSFDQSDKLCLWKTKD---- 223
Query: 193 NLVRDASCWQREHEWRQDIAVVTKWLSGVSPY 224
N D W H + +++KWL S Y
Sbjct: 224 NCSDD---WYCLHIFPFQYLLLSKWLPLRSTY 252
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1255 1153 0.00092 123 3 11 22 0.41 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 641 (68 KB)
Total size of DFA: 596 KB (2262 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 98.24u 0.13s 98.37t Elapsed: 00:00:05
Total cpu time: 98.24u 0.13s 98.37t Elapsed: 00:00:05
Start: Tue May 21 15:30:20 2013 End: Tue May 21 15:30:25 2013