BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000850
(1254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULE6|PALD_HUMAN Paladin OS=Homo sapiens GN=PALD1 PE=1 SV=3
Length = 856
Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 213/817 (26%), Positives = 340/817 (41%), Gaps = 166/817 (20%)
Query: 44 GAPNYRQADS-LRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGR- 101
GAPN+RQ L V G+ P++ G R VL+ + QKDG R V++ +REEPV+++
Sbjct: 119 GAPNFRQVQGGLTVFGMGQPSLSGFRRVLQKL--QKDGHRECVIFC-VREEPVLFLRADE 175
Query: 102 ---PFVLRDVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQM 158
+ RD NL+ G RVE +E ++++I A N V
Sbjct: 176 DFVSYTPRDKQNLHENLQGLGPG-VRVESLELAIRKEIHDFAQLSENTYHVYH-----NT 229
Query: 159 VDQW-EPVSC-----DSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKI 212
D W EP + D + +VY+ Y R+P+ ++ SP E D V +
Sbjct: 230 EDLWGEPHAVAIHGEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVL 289
Query: 213 SQTDLNTEV----------IFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVF 262
+T ++ +F+CQMG GRT GMV+ TL+ L+R G + P
Sbjct: 290 RETPSLLQLRDAHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQP--------- 340
Query: 263 DSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQNLREAIA 322
++ + A LP ++ VI+S R++ G +VD+ I CA + +L+E +
Sbjct: 341 EAAPTQAKPLPME-------QFQVIQSFLRMVPQGRRMVEEVDRAITACAELHDLKEVVL 393
Query: 323 TYRNSILRQPDEMKRQASLSFFVEY------LERYYFLICFAVYIHTERAALCSSSFGHS 376
+ + E Q S S + LERY++LI F Y+H E+ L +
Sbjct: 394 ENQKKLEGIRPESPAQGSGSRHSVWQRALWSLERYFYLILFNYYLH-EQYPLAFA----L 448
Query: 377 SFADWMKARPELYSIIRRLLRRDPMGALGYANVKPSLMKMAESADGRPHEMGVVAALRNG 436
SF+ W+ A PELY + L P+ P ++ +LR
Sbjct: 449 SFSRWLCAHPELYRLPVTLSSAGPVA---------------------PRDLIARGSLRED 487
Query: 437 QVLGSQTVLKSDHCPGCQNQSLPERVEGAPNFREVSGFPVYGVANPTIDGIRSVIRRIGH 496
++ + R NFR V P+YG A P+ + S++ +
Sbjct: 488 DLVSPDALSTV-------------REMDVANFRRVPRMPIYGTAQPSAKALGSILAYLTD 534
Query: 497 FK-GCCPVFWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVERMEARLKEDI 555
K V W ++REE V+ +G + LR P + +++E +EA+LK +
Sbjct: 535 AKRRLRKVVWVSLREEAVLECDGHTYSLRWPGPP---------VAPDQLETLEAQLKAHL 585
Query: 556 LREAERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKYARVPITD 615
G + +T T EVF + Y R+P+ D
Sbjct: 586 SEPPPGKEGPLTYRFQT----------------CLTMQEVFSQHRRACPGLTYHRIPMPD 629
Query: 616 GKAPKTSDFDMLAVNI-ASASKD--TAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIR 672
AP+ DFD L + A+ SKD T FVF+C G+GRTTT V+A L I G P
Sbjct: 630 FCAPREEDFDQLLEALRAALSKDPGTGFVFSCLSGQGRTTTAMVVAVLAFWHIQ-GFP-- 686
Query: 673 VLHEDVTHEELDSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFD 732
+V EEL S + F + ++ K+ +L
Sbjct: 687 ----EVGEEELVSVPDA-------------------------KFTKGEFQVVMKVVQLLP 717
Query: 733 NGVKCREALDAIIDRCSALQ-----NIREAVL-HYRKVFNQQHVEPRVRMVALSRGAEYL 786
+G + ++ +DA +D S ++RE ++ YR+ + + +R + L R +YL
Sbjct: 718 DGHRVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQ-EMRRLQL-RSLQYL 775
Query: 787 ERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKSWLRQ 823
ERY LI F AYL E D + + F +W+++
Sbjct: 776 ERYVCLILFNAYLHLEKADSW------QRPFSTWMQE 806
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 189/812 (23%), Positives = 308/812 (37%), Gaps = 164/812 (20%)
Query: 464 GAPNFREVSG-FPVYGVANPTIDGIRSVIRRI---GHFKGCCPVFWHNMREEPVIYINGK 519
GAPNFR+V G V+G+ P++ G R V++++ GH + C +F +REEPV+++
Sbjct: 119 GAPNFRQVQGGLTVFGMGQPSLSGFRRVLQKLQKDGHRE--CVIF--CVREEPVLFLRAD 174
Query: 520 PFVLREVERPYKNMLE-YTGIDRE-RVERMEARLKEDILREAERYGGAIMVIHETND--G 575
+ R +N+ E G+ RVE +E ++++I A+ V H T D G
Sbjct: 175 EDFVSYTPRDKQNLHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWG 234
Query: 576 QIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKYARVPITDGKAPKTSDFDMLAVNIASAS 635
+ H + + EV+K +Y R+P+ + +P + D +
Sbjct: 235 EPHAVAIH-GEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETP 293
Query: 636 K----------DTAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVLHEDVTHEELDS 685
A VF+CQMG GRT G V+ L+ +LH S
Sbjct: 294 SLLQLRDAHGPPPALVFSCQMGVGRTNLGMVLGTLI-----------LLHR--------S 334
Query: 686 GSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDNGVKCREALDAII 745
G++S E AA T + + ++ ++ R+ G + E +D I
Sbjct: 335 GTTSQPE-----AAPT----------QAKPLPMEQFQVIQSFLRMVPQGRRMVEEVDRAI 379
Query: 746 DRCSALQNIREAVLHYRKVFNQQHVEPRV-----RMVALSRGAEYLERYFRLIAFAAYLG 800
C+ L +++E VL +K E R R LERYF LI F YL
Sbjct: 380 TACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQRALWSLERYFYLILFNYYLH 439
Query: 801 SEAFDGFCGQGESRMTFKSWLRQRPEVQAMKWSIRIRPGRFLTVPEELRAPQESQHGDAV 860
+ F ++F WL PE+ + ++ P +L A + D V
Sbjct: 440 EQYPLAFA------LSFSRWLCAHPELYRLPVTLS---SAGPVAPRDLIARGSLREDDLV 490
Query: 861 M-EAIVRARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVYKVDGYPVYSMATPTISG 919
+A+ R V + +M P+Y A P+
Sbjct: 491 SPDALSTVREMDVANFRRVPRM--------------------------PIYGTAQPSAKA 524
Query: 920 AKEMLAYL-GAKTKTEGSFSQKVILTDLREEAVVYINGTPFVLRELNKPVDTLKHVGITG 978
+LAYL AK + +KV+ LREEAV+ +G + LR PV +
Sbjct: 525 LGSILAYLTDAKRRL-----RKVVWVSLREEAVLECDGHTYSLRWPGPPVAPDQ------ 573
Query: 979 PVVEHMEARLKEDILTEVRQSGGRMLLHREEYNPASNQSSVVGYWENIFADDVKTPAEVY 1038
+E +EA+LK H E P + + T EV+
Sbjct: 574 --LETLEAQLKA---------------HLSEPPPGKEGPLTYRFQTCL------TMQEVF 610
Query: 1039 AALQDEGYNITYRRIPLTRERDALASDIDAI------QYCKDDSAGCYLFVSHTGFGGVA 1092
+ + +TY RIP+ D D + KD G ++F +G G
Sbjct: 611 SQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTG-FVFSCLSGQGRTT 669
Query: 1093 YAMAIICLRLDAEANFASKVPQSLVGPHLPLTYEENLPSWASDEEAHKMGDYRDILNLTR 1152
AM + L F P EE L S D + K G+++ ++ + +
Sbjct: 670 TAMVVAVLAFWHIQGF-------------PEVGEEELVS-VPDAKFTK-GEFQVVMKVVQ 714
Query: 1153 VLVYGPQSKADVDTIIERCAGAG-----HLRDDILHYSEELKKFSNEYDEQRAYLMDIGI 1207
+L G + K +VD ++ + HLR+ I+ + K + +R L +
Sbjct: 715 LLPDGHRVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLR--SL 772
Query: 1208 KALRRYFFLITFRSFLYCTSPAEIN--FKSWM 1237
+ L RY LI F ++L+ F +WM
Sbjct: 773 QYLERYVCLILFNAYLHLEKADSWQRPFSTWM 804
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 177/362 (48%), Gaps = 59/362 (16%)
Query: 47 NYRQADSLRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGRPFVLR 106
N+R+ + ++G A P+ + + ++L ++ K R +V+W+SLREE V+ +G + LR
Sbjct: 505 NFRRVPRMPIYGTAQPSAKALGSILAYLTDAKRRLR-KVVWVSLREEAVLECDGHTYSLR 563
Query: 107 DVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQMVDQWEPVS 166
G P + ++E +EA+LK + ++ P + + +
Sbjct: 564 WPGPP--------VAPDQLETLEAQLKAHL-------------SEPPPGKEGPLTYRFQT 602
Query: 167 CDSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKIS---QTDLNTEVIF 223
C +++ +V+ + + + Y R+P+ D +P+E+DFD L++ + D T +F
Sbjct: 603 CLTMQ---EVFSQHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVF 659
Query: 224 NCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGE 283
+C G+GRTTT MV+A L + + G P + G ++P+++ +GE
Sbjct: 660 SCLSGQGRTTTAMVVAVLAFWH---IQGFP---------EVGEEELVSVPDAK--FTKGE 705
Query: 284 YAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQ-----NLRE-AIATYRNS-ILRQPDEMK 336
+ V+ + ++L G K++VD +D + +LRE I TYR + ++ EM+
Sbjct: 706 FQVVMKVVQLLPDGHRVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMR 765
Query: 337 RQASLSFFVEYLERYYFLICFAVYIHTERAALCSSSFGHSSFADWMK---ARPELYSIIR 393
R S ++YLERY LI F Y+H E+A F+ WM+ ++ +Y I+
Sbjct: 766 RLQLRS--LQYLERYVCLILFNAYLHLEKA-----DSWQRPFSTWMQEVASKAGIYEILN 818
Query: 394 RL 395
L
Sbjct: 819 EL 820
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 152/373 (40%), Gaps = 51/373 (13%)
Query: 897 GAPHVYKVDG-YPVYSMATPTISGAKEMLAYLGAKTKTEGSFSQKVILTDLREEAVVYIN 955
GAP+ +V G V+ M P++SG + +L K + +G ++ ++ +REE V+++
Sbjct: 119 GAPNFRQVQGGLTVFGMGQPSLSGFRRVLQ----KLQKDGH--RECVIFCVREEPVLFLR 172
Query: 956 G----TPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHREEYN 1011
+ R+ + L+ +G G VE +E ++++I + S ++ +
Sbjct: 173 ADEDFVSYTPRDKQNLHENLQGLG-PGVRVESLELAIRKEIHDFAQLSENTYHVYHNTED 231
Query: 1012 PASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDA-IQ 1070
+V + E DD+ EVY Y R+PL + L + +DA +
Sbjct: 232 LWGEPHAVAIHGE----DDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVS 287
Query: 1071 YCKD--------DSAG---CYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGP 1119
++ D+ G +F G G M + L L + S+ P
Sbjct: 288 VLRETPSLLQLRDAHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQ-------P 340
Query: 1120 HLPLTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAGHLRD 1179
T + LP M ++ I + R++ G + +VD I CA L++
Sbjct: 341 EAAPTQAKPLP----------MEQFQVIQSFLRMVPQGRRMVEEVDRAITACAELHDLKE 390
Query: 1180 DILHYSEELKKFSNEYDEQ----RAYLMDIGIKALRRYFFLITFRSFLYCTSPA--EINF 1233
+L ++L+ E Q R + + +L RYF+LI F +L+ P ++F
Sbjct: 391 VVLENQKKLEGIRPESPAQGSGSRHSVWQRALWSLERYFYLILFNYYLHEQYPLAFALSF 450
Query: 1234 KSWMDGRPELGHL 1246
W+ PEL L
Sbjct: 451 SRWLCAHPELYRL 463
>sp|Q6DIR8|PALD_XENTR Paladin OS=Xenopus tropicalis GN=pald1 PE=2 SV=1
Length = 872
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 190/814 (23%), Positives = 348/814 (42%), Gaps = 150/814 (18%)
Query: 44 GAPNYRQA-DSLRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGR- 101
GAPN+RQA V+G+ P++ G + VL+ + Q +G + + ++ +REEPV+++
Sbjct: 122 GAPNFRQARGGYEVYGMGQPSLNGFKQVLQKL--QSNGHK-ECVFFCVREEPVLFLKLED 178
Query: 102 ---PFVLRDVGRPFSNLEYTGINRA-RVEQMEARLKEDIIMEAARFGNKILVTDELPDGQ 157
P+ R NL + + R E +E +++++ A GN V +++ +
Sbjct: 179 DFVPYTPRRKENLHENLH--DLEKGLRAENLELAIRKELHDFAQLSGNSYYVYNDIEHFK 236
Query: 158 MVDQWEPVSCDS-VKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT- 215
+ C+ + +VY Y R+P+ + +P E FD V+ + +
Sbjct: 237 DEPHSIIIHCEEDIHVTEEVYNRPVFLLPAYRYHRLPLPMDGAPLETQFDAFVNILRENP 296
Query: 216 ------DLN---TEVIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGS 266
D N ++F+CQ G GRT M++ TLV +R GA
Sbjct: 297 SLLLLHDANHPPPALLFSCQTGVGRTNLAMILGTLVLYHRKGACE--------------- 341
Query: 267 SVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRN 326
+ + + + VI++ ++ G +VDK I+ C+ M +++ A+ +
Sbjct: 342 --KQTISQDTNVLPKQRFQVIQNFINMVPNGEAIVDEVDKAIELCSEMHDIKAALYECKK 399
Query: 327 SI--LRQPDEMKRQASLSFFVE----YLERYYFLICFAVYIHTERAALCSSSFGHSSFAD 380
+ + + +++ ++ +F++ LERY++LI F Y+H E+ L + SF+
Sbjct: 400 KLEGIGEGYQIQGSSTKEYFLKGTLHSLERYFYLITFNYYLH-EQYPLAFA----LSFSK 454
Query: 381 WMKARPELYSIIRRLLRRDPMGALGYANVKPSLMKMAESADGRPHEMGVVAALRNGQVL- 439
WM +P +Y + +L + + S G+++
Sbjct: 455 WMCTQPWIYRL---------QASLNLSELTLS-----------------------GELIT 482
Query: 440 -GSQTVLKSDHCPGCQNQSLPERVEGAPNFREVSGFPVYGVANPTIDGIRSVIRRIGHFK 498
G++ ++ D +L E NFR V PVYG A P++ SV+ + K
Sbjct: 483 KGTRVLVLDDRFSPDVLSTLKEM--NVANFRRVPKMPVYGTAQPSLKATGSVLSYLTDAK 540
Query: 499 -GCCPVFWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVERMEARLKEDILR 557
+ W N+RE+ ++ N + F RE + + + E++E++EA + +L
Sbjct: 541 RKYSNILWVNLREDVILEANEQIFTPREPDN-LEQQIAVPAASPEQLEKLEATVANHVLT 599
Query: 558 EAERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFP-IKYARVPITDG 616
+ + + + ++F ++ +T E+F +P + Y R+PI D
Sbjct: 600 SQKWLE---VYLEQEKQMKMF--------KTCRTMQEIFN-QHRSAYPGLVYRRIPIPDF 647
Query: 617 KAPKTSDFDMLAVNIASA---SKDTAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRV 673
AP+ DFDML ++ S AFVFNC G+GRTTT VIA L + I
Sbjct: 648 CAPREQDFDMLLQSMKSMLAEDSSAAFVFNCHGGKGRTTTAMVIAVLTLWHFN---SIPE 704
Query: 674 LHEDVTHEELDSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDN 733
+ ED D+ + GE ++ KI +L +
Sbjct: 705 ITEDEIVSVPDAKYTKGE-----------------------------FEVVMKIVQLLPD 735
Query: 734 GVKCREALDAIIDRCSALQ-----NIREAVL-HYRKVFNQQHVEPRVRMVALSRGAEYLE 787
G K ++ +D +D S ++RE ++ YR+V ++ + +R++ L R +YLE
Sbjct: 736 GHKIKKEVDMALDSISETMTPMHYHLREIIICTYRQVKTAKNSK-EMRLLQL-RSLQYLE 793
Query: 788 RYFRLIAFAAYLGSEAFDGFCGQGESRMTFKSWL 821
RY LI F AYL E D + + F +W+
Sbjct: 794 RYIYLILFNAYLHLEKKDTW------QRPFSTWM 821
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 176/822 (21%), Positives = 324/822 (39%), Gaps = 170/822 (20%)
Query: 464 GAPNFREV-SGFPVYGVANPTIDGIRSVIRRI---GHFKGCCPVFWHNMREEPVIYINGK 519
GAPNFR+ G+ VYG+ P+++G + V++++ GH K C VF+ +REEPV+++ +
Sbjct: 122 GAPNFRQARGGYEVYGMGQPSLNGFKQVLQKLQSNGH-KEC--VFF-CVREEPVLFLKLE 177
Query: 520 ----PFVLREVERPYKNMLEY-TGIDRERVERMEARLKEDILREAERYGGAIMVIHETND 574
P+ R E ++N+ + G+ R E +E +++++ A+ G + V ++
Sbjct: 178 DDFVPYTPRRKENLHENLHDLEKGL---RAENLELAIRKELHDFAQLSGNSYYVYNDIEH 234
Query: 575 GQ------IFDAWE--HVSSESVQTPLEVFKCLEDDGFPIKYARVPITDGKAPKTSDFDM 626
+ I E HV+ E P+ + +Y R+P+ AP + FD
Sbjct: 235 FKDEPHSIIIHCEEDIHVTEEVYNRPVFLLPAY-------RYHRLPLPMDGAPLETQFDA 287
Query: 627 LAVNIASASKDT-----------AFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVLH 675
VNI + A +F+CQ G GRT ++ L + Y R
Sbjct: 288 F-VNILRENPSLLLLHDANHPPPALLFSCQTGVGRTNLAMILGTL----VLYHR------ 336
Query: 676 EDVTHEELDSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDNGV 735
GA +IS+ + + F + + + NG
Sbjct: 337 --------------------KGACEKQTISQDTNVLPKQRFQV-----IQNFINMVPNGE 371
Query: 736 KCREALDAIIDRCSALQNIREAVLHYRKVFN-----QQHVEPRVRMVALSRGAEYLERYF 790
+ +D I+ CS + +I+ A+ +K Q + L LERYF
Sbjct: 372 AIVDEVDKAIELCSEMHDIKAALYECKKKLEGIGEGYQIQGSSTKEYFLKGTLHSLERYF 431
Query: 791 RLIAFAAYLGSEAFDGFCGQGESRMTFKSWLRQRPEVQAMKWSIRIRPGRFLTVPEELRA 850
LI F YL + F ++F W+ +P + ++ S+ + LT+
Sbjct: 432 YLITFNYYLHEQYPLAFA------LSFSKWMCTQPWIYRLQASLNLSE---LTL------ 476
Query: 851 PQESQHGDAVMEAIVRARNGSVLGKGS---ILKMYFFPGQRTSSHIQIHGAPHVYKVDGY 907
+G ++ KG+ +L F P S ++ + +V
Sbjct: 477 ------------------SGELITKGTRVLVLDDRFSPD--VLSTLKEMNVANFRRVPKM 516
Query: 908 PVYSMATPTISGAKEMLAYLGAKTKTEGSFSQKVILTDLREEAVVYINGTPFVLRELNKP 967
PVY A P++ +L+YL T + +S ++ +LRE+ ++ N F RE +
Sbjct: 517 PVYGTAQPSLKATGSVLSYL---TDAKRKYS-NILWVNLREDVILEANEQIFTPREPDNL 572
Query: 968 VDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHREEYNPASNQSSVVGYWENIF 1027
+ + +E +EA + +LT Q + L +E+ +
Sbjct: 573 EQQIAVPAASPEQLEKLEATVANHVLTS--QKWLEVYLEQEK--------------QMKM 616
Query: 1028 ADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDAI-----QYCKDDSAGCYLF 1082
+T E++ + + YRRIP+ D D + +DS+ ++F
Sbjct: 617 FKTCRTMQEIFNQHRSAYPGLVYRRIPIPDFCAPREQDFDMLLQSMKSMLAEDSSAAFVF 676
Query: 1083 VSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGPHLPLTYEENLPSWASDEEAHKMG 1142
H G G AM I L L +F S +P E+ + S + + G
Sbjct: 677 NCHGGKGRTTTAMVIAVLTL---WHFNS----------IPEITEDEIVS--VPDAKYTKG 721
Query: 1143 DYRDILNLTRVLVYGPQSKADVDTIIERCAGAG-----HLRDDILHYSEELKKFSNEYDE 1197
++ ++ + ++L G + K +VD ++ + HLR+ I+ ++K N +
Sbjct: 722 EFEVVMKIVQLLPDGHKIKKEVDMALDSISETMTPMHYHLREIIICTYRQVKTAKN--SK 779
Query: 1198 QRAYLMDIGIKALRRYFFLITFRSFLYCTSPAEIN--FKSWM 1237
+ L ++ L RY +LI F ++L+ F +WM
Sbjct: 780 EMRLLQLRSLQYLERYIYLILFNAYLHLEKKDTWQRPFSTWM 821
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 168/362 (46%), Gaps = 46/362 (12%)
Query: 47 NYRQADSLRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGRPFVLR 106
N+R+ + V+G A P+++ +VL ++ K K +LW++LRE+ ++ N + F R
Sbjct: 509 NFRRVPKMPVYGTAQPSLKATGSVLSYLTDAKR-KYSNILWVNLREDVILEANEQIFTPR 567
Query: 107 DVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQMVDQWEPVS 166
+ + + ++E++EA + N +L + + + + + +
Sbjct: 568 EPDNLEQQIAVPAASPEQLEKLEATV-----------ANHVLTSQKWLEVYLEQEKQMKM 616
Query: 167 CDSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT---DLNTEVIF 223
+ + +++ + + + Y R+P+ D +P+EQDFD+L+ + D + +F
Sbjct: 617 FKTCRTMQEIFNQHRSAYPGLVYRRIPIPDFCAPREQDFDMLLQSMKSMLAEDSSAAFVF 676
Query: 224 NCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGE 283
NC G+GRTTT MVIA L + + IP D SV D +GE
Sbjct: 677 NCHGGKGRTTTAMVIAVLTLWH---FNSIPEITE-----DEIVSVPD------AKYTKGE 722
Query: 284 YAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQ-----NLRE-AIATYRN-SILRQPDEMK 336
+ V+ + ++L G + K++VD +D + +LRE I TYR + EM+
Sbjct: 723 FEVVMKIVQLLPDGHKIKKEVDMALDSISETMTPMHYHLREIIICTYRQVKTAKNSKEMR 782
Query: 337 RQASLSFFVEYLERYYFLICFAVYIHTERAALCSSSFGHSSFADWM---KARPELYSIIR 393
S ++YLERY +LI F Y+H E+ F+ WM ++ +Y ++
Sbjct: 783 LLQLRS--LQYLERYIYLILFNAYLHLEK-----KDTWQRPFSTWMYEVASKAGVYEVLN 835
Query: 394 RL 395
+L
Sbjct: 836 QL 837
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 142/368 (38%), Gaps = 52/368 (14%)
Query: 897 GAPHVYKV-DGYPVYSMATPTISGAKEMLAYLGAKTKTEGSF----SQKVILTDLREEAV 951
GAP+ + GY VY M P+++G K++L L + E F + V+ L ++ V
Sbjct: 122 GAPNFRQARGGYEVYGMGQPSLNGFKQVLQKLQSNGHKECVFFCVREEPVLFLKLEDDFV 181
Query: 952 VYINGTPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHREEYN 1011
Y TP L++ + L+ G E++E +++++ + SG ++ + +
Sbjct: 182 PY---TPRRKENLHENLHDLE----KGLRAENLELAIRKELHDFAQLSGNSYYVYNDIEH 234
Query: 1012 PASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDA--- 1068
S++ + E +D+ EVY Y R+PL + L + DA
Sbjct: 235 FKDEPHSIIIHCE----EDIHVTEEVYNRPVFLLPAYRYHRLPLPMDGAPLETQFDAFVN 290
Query: 1069 ---------IQYCKDDSAGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGP 1119
+ + + LF TG G AM + L L K
Sbjct: 291 ILRENPSLLLLHDANHPPPALLFSCQTGVGRTNLAMILGTLVLYHRKGACEK-------- 342
Query: 1120 HLPLTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAGHLRD 1179
+ + D ++ I N ++ G +VD IE C+ ++
Sbjct: 343 ----------QTISQDTNVLPKQRFQVIQNFINMVPNGEAIVDEVDKAIELCSEMHDIKA 392
Query: 1180 DILHYSEELKKFSNEYDEQ----RAYLMDIGIKALRRYFFLITFRSFLYCTSPA--EINF 1233
+ ++L+ Y Q + Y + + +L RYF+LITF +L+ P ++F
Sbjct: 393 ALYECKKKLEGIGEGYQIQGSSTKEYFLKGTLHSLERYFYLITFNYYLHEQYPLAFALSF 452
Query: 1234 KSWMDGRP 1241
WM +P
Sbjct: 453 SKWMCTQP 460
>sp|Q8JHZ8|PALD_CHICK Paladin OS=Gallus gallus GN=PALD1 PE=2 SV=2
Length = 868
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 197/817 (24%), Positives = 348/817 (42%), Gaps = 153/817 (18%)
Query: 44 GAPNYRQADS-LRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYI---- 98
GAPN+RQA V G+ P++ G + VL+ + Q++G + + ++ +REEPV+++
Sbjct: 118 GAPNFRQAKGGYAVFGMGQPSLGGFKLVLQKL--QREGHK-ECVFFCVREEPVLFLRVES 174
Query: 99 NGRPFVLRDVGRPFSNLEYTGINRA-RVEQMEARLKEDIIMEAARFGNKILVTDELPDGQ 157
+ P+ R NL + R RVE +E ++++I A V +++ +
Sbjct: 175 DFVPYTPRGKENLHENLH--SLRRGLRVEDLELTIRKEIHDFAQLSEGVYYVYNDIE--R 230
Query: 158 MVDQWEPVSC---DSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQ 214
D+ V + + +VY Y R+P+ + +P E+ FD + + +
Sbjct: 231 FRDEPHTVRVQGEEDIHVTEEVYRRPIFLLPTYRYHRLPLPVDGAPLEEQFDAFICFLRE 290
Query: 215 TD---------LNTEVIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSG 265
+ ++F+CQ G GRT M + TL+ + GA+ P
Sbjct: 291 SSGLLLRDPSRPPPALLFSCQTGVGRTNLAMALGTLILHHHRGAAPKP------------ 338
Query: 266 SSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYR 325
+ P+ + R + VI+S ++ G + +VD VI C+ M +++EAI +
Sbjct: 339 -----DPPHPAKMPPRARFRVIQSFIEMVPKGQQMVEEVDSVIASCSEMHDMKEAIYESK 393
Query: 326 NSI--LRQPDEMKRQASLSFFVE----YLERYYFLICFAVYIHTERAALCSSSFGHS-SF 378
+ + + +++ ++ +F++ LERY++LI F Y+H + G + SF
Sbjct: 394 KKLEGIGEDYQIQGNSTKEYFLQRTLQSLERYFYLIAFNYYLHEQYP------LGFALSF 447
Query: 379 ADWMKARPELYSIIRRLLRRDPMGALGYANVKPSLMKMAESADGRPHEMGVVAAL--RNG 436
+ WM PELY + A E+ + L +
Sbjct: 448 SRWMCRHPELYRL---------------------------QAIMNSSELTITGDLITKGT 480
Query: 437 QVLGSQTVLKSDHCPGCQNQSLPERVEGAPNFREVSGFPVYGVANPTIDGIRSVIRRIGH 496
+VL V+ CP + + NFR V P+YG A P+ + SV+R +
Sbjct: 481 RVL----VVDERFCPDVLSTV---KEMSVANFRRVPKMPIYGTAQPSSKALGSVLRYLTD 533
Query: 497 FK-GCCPVFWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVERMEARLKEDI 555
K + W ++REE V+ N + + LRE ++ E++E++E+ LK D+
Sbjct: 534 AKRKHSRILWVSLREEVVLEGNEQIYTLRE-PGSLDQLIPVPVSTPEQLEKLESTLKGDL 592
Query: 556 LREAERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKYARVPITD 615
L+ + + + ++F +S T E+F + + Y R+PI D
Sbjct: 593 LKSQKWLE---VYLEAEKQMKMF--------KSCLTTQEIFNQHKSTCQGLTYRRIPIPD 641
Query: 616 GKAPKTSDFDMLAVNIASA---SKDTAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIR 672
APK DFD L + SA TAFVFNC GRGRTTT VIA L + G P
Sbjct: 642 FCAPKEQDFDRLLEAMKSALAEDSQTAFVFNCASGRGRTTTAMVIAVLTLWHFN-GIP-- 698
Query: 673 VLHEDVTHEELDSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFD 732
+++ EE+ S + G + ++ K+ +L
Sbjct: 699 ----EMSEEEIVSVPDAKYTKG-------------------------EFEVVMKVVQLLP 729
Query: 733 NGVKCREALDAIIDRCSALQ-----NIREAVL-HYRKVFNQQHVEPRVRMVALSRGAEYL 786
+G + ++ +D +D S ++RE ++ YR+ + + + R + R +YL
Sbjct: 730 DGHRMKKEVDMALDTVSETMTPMHYHLREIIICTYRQ--GRSGKDEQERRLLRLRSLQYL 787
Query: 787 ERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKSWLRQ 823
ERY LI F +YL E D + + F W+R+
Sbjct: 788 ERYIYLILFNSYLHLEKKDSW------QRPFSLWMRE 818
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 180/373 (48%), Gaps = 43/373 (11%)
Query: 20 GKRTILKSDHFPGCQNKRLTPQIDGAPNYRQADSLRVHGVAIPTIEGIRNVLKHIGAQKD 79
G R ++ + F C + T + N+R+ + ++G A P+ + + +VL+++ K
Sbjct: 479 GTRVLVVDERF--CPDVLSTVKEMSVANFRRVPKMPIYGTAQPSSKALGSVLRYLTDAKR 536
Query: 80 GKRVQVLWISLREEPVVYINGRPFVLRDVGRPFSNLEYTGINRARVEQMEARLKEDIIME 139
K ++LW+SLREE V+ N + + LR+ G + ++E++E+ LK D++
Sbjct: 537 -KHSRILWVSLREEVVLEGNEQIYTLREPGSLDQLIPVPVSTPEQLEKLESTLKGDLLKS 595
Query: 140 AARFGNKILVTDELPDGQMVDQWEPVSCDSVKAPLDVYEELQVEGYLVDYERVPVTDEKS 199
+ ++ +M SC + + +++ + + + Y R+P+ D +
Sbjct: 596 QKWLEVYLEAEKQM---KMFK-----SCLTTQ---EIFNQHKSTCQGLTYRRIPIPDFCA 644
Query: 200 PKEQDFDILVDKISQT---DLNTEVIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTN 256
PKEQDFD L++ + D T +FNC GRGRTTT MVIA L + +GIP +
Sbjct: 645 PKEQDFDRLLEAMKSALAEDSQTAFVFNCASGRGRTTTAMVIAVLTLWH---FNGIPEMS 701
Query: 257 SIGRVFDSGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQ- 315
V ++P+++ +GE+ V+ + ++L G K++VD +D +
Sbjct: 702 EEEIV---------SVPDAKYT--KGEFEVVMKVVQLLPDGHRMKKEVDMALDTVSETMT 750
Query: 316 ----NLRE-AIATYRNSILRQPDEMKRQASLSFFVEYLERYYFLICFAVYIHTERAALCS 370
+LRE I TYR DE +R+ ++YLERY +LI F Y+H E+
Sbjct: 751 PMHYHLREIIICTYRQG-RSGKDEQERRLLRLRSLQYLERYIYLILFNSYLHLEK----- 804
Query: 371 SSFGHSSFADWMK 383
F+ WM+
Sbjct: 805 KDSWQRPFSLWMR 817
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 186/821 (22%), Positives = 320/821 (38%), Gaps = 169/821 (20%)
Query: 464 GAPNFREVSG-FPVYGVANPTIDGIRSVIRRI---GHFKGCCPVFWHNMREEPVIYINGK 519
GAPNFR+ G + V+G+ P++ G + V++++ GH K C VF+ +REEPV+++ +
Sbjct: 118 GAPNFRQAKGGYAVFGMGQPSLGGFKLVLQKLQREGH-KEC--VFF-CVREEPVLFLRVE 173
Query: 520 PFVLREVERPYKNMLEYTGIDRE--RVERMEARLKEDILREAERYGGAIMVIHETNDGQI 577
+ R +N+ E R RVE +E ++++I A+ G V ND +
Sbjct: 174 SDFVPYTPRGKENLHENLHSLRRGLRVEDLELTIRKEIHDFAQLSEGVYYVY---NDIER 230
Query: 578 FDAWEHV----SSESVQTPLEVFKCLEDDGFPI------KYARVPITDGKAPKTSDFDML 627
F H E + EV++ PI +Y R+P+ AP FD
Sbjct: 231 FRDEPHTVRVQGEEDIHVTEEVYR------RPIFLLPTYRYHRLPLPVDGAPLEEQFDAF 284
Query: 628 AVNIASAS---------KDTAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVLHEDV 678
+ +S A +F+CQ G GRT + L +LH
Sbjct: 285 ICFLRESSGLLLRDPSRPPPALLFSCQTGVGRTNLAMALGTL------------ILHH-- 330
Query: 679 THEELDSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDNGVKCR 738
G +K+ + R ++ + G +
Sbjct: 331 -------------HRGAAPKPDPPHPAKMPPRARFR--------VIQSFIEMVPKGQQMV 369
Query: 739 EALDAIIDRCSALQNIREAVLHYRKVF-----NQQHVEPRVRMVALSRGAEYLERYFRLI 793
E +D++I CS + +++EA+ +K + Q + L R + LERYF LI
Sbjct: 370 EEVDSVIASCSEMHDMKEAIYESKKKLEGIGEDYQIQGNSTKEYFLQRTLQSLERYFYLI 429
Query: 794 AFAAYLGSEAFDGFCGQGESRMTFKSWLRQRPEVQAMKWSIRIRPGRFLTVPEELRAPQE 853
AF YL + GF ++F W+ + PE+ ++
Sbjct: 430 AFNYYLHEQYPLGFA------LSFSRWMCRHPELYRLQ---------------------- 461
Query: 854 SQHGDAVMEAIVRARNGSVLGKGS---ILKMYFFPGQRTSSHIQIHGAPHVYKVDGYPVY 910
A+M + G ++ KG+ ++ F P S ++ + +V P+Y
Sbjct: 462 -----AIMNSSELTITGDLITKGTRVLVVDERFCPD--VLSTVKEMSVANFRRVPKMPIY 514
Query: 911 SMATPTISGAKEMLAYL-GAKTKTEGSFSQKVILTDLREEAVVYINGTPFVLRELNKPVD 969
A P+ +L YL AK K +++ LREE V+ N + LRE +D
Sbjct: 515 GTAQPSSKALGSVLRYLTDAKRK-----HSRILWVSLREEVVLEGNEQIYTLREPGS-LD 568
Query: 970 TLKHVGITGP-VVEHMEARLKEDILTEVRQSGGRMLLHREEYNPASNQSSVVGYWENIFA 1028
L V ++ P +E +E+ LK D+L + E Y A Q +
Sbjct: 569 QLIPVPVSTPEQLEKLESTLKGDLLKSQKW--------LEVYLEAEKQMKMF-------- 612
Query: 1029 DDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDAI-----QYCKDDSAGCYLFV 1083
T E++ + +TYRRIP+ D D + +DS ++F
Sbjct: 613 KSCLTTQEIFNQHKSTCQGLTYRRIPIPDFCAPKEQDFDRLLEAMKSALAEDSQTAFVFN 672
Query: 1084 SHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGPHLPLTYEENLPSWASDEEAHKMGD 1143
+G G AM I L L +F +P EE + S + + G+
Sbjct: 673 CASGRGRTTTAMVIAVLTL---WHFNG----------IPEMSEEEIVS--VPDAKYTKGE 717
Query: 1144 YRDILNLTRVLVYGPQSKADVDTIIERCAGAG-----HLRDDILHYSEELKKFSNEYDEQ 1198
+ ++ + ++L G + K +VD ++ + HLR+ I+ + + S + +++
Sbjct: 718 FEVVMKVVQLLPDGHRMKKEVDMALDTVSETMTPMHYHLREIIICTYRQGR--SGKDEQE 775
Query: 1199 RAYLMDIGIKALRRYFFLITFRSFLYCTSPAEIN--FKSWM 1237
R L ++ L RY +LI F S+L+ F WM
Sbjct: 776 RRLLRLRSLQYLERYIYLILFNSYLHLEKKDSWQRPFSLWM 816
>sp|Q803E0|PALD_DANRE Paladin OS=Danio rerio GN=pald1 PE=2 SV=1
Length = 860
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 195/811 (24%), Positives = 345/811 (42%), Gaps = 140/811 (17%)
Query: 44 GAPNYRQADS-LRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGR- 101
GAPN+RQ+ ++G+ ++ G + VL+ + Q G + +V++ LREEPVV+++ +
Sbjct: 110 GAPNFRQSGGGFPLYGMGQTSLGGFKRVLESL--QTRGHQ-EVIFFCLREEPVVFLHLQE 166
Query: 102 ---PFVLRDVGRPFSNLEYTGINR-ARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQ 157
P+ R NL++ + R A E +E +++++ A N V +++ +
Sbjct: 167 DFLPYTPRRKENLHENLQH--LQRGASSEDLELTIRKELHDFAKLNDNMFYVYNDIEHLK 224
Query: 158 MVDQWEPV-SCDSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT- 215
Q + S + + +VY + Y R+P+ E +P E+ FD V + +
Sbjct: 225 GEPQKICICSEEDIHITEEVYRRPRFTMPAYRYYRLPLPMEGAPMEEQFDAFVKVLRENP 284
Query: 216 --DLNTE-------VIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGS 266
LN + ++F+CQ+G GRT G+++ TLV ++ + R +
Sbjct: 285 SLSLNRDASRLLPALLFSCQVGVGRTNLGLILGTLVMMH------------LTRTTAEKT 332
Query: 267 SVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRN 326
+ A+ E I ++ VI SL L G E +V++ ID C+ M ++RE+I +
Sbjct: 333 TPAEEEVKDEHKI---QFRVIESLIGKLPKGQEVMEEVNRAIDLCSEMHDIRESIYENKQ 389
Query: 327 SILRQPDEMKRQASLS--FF----VEYLERYYFLICFAVYIHTERAALCSSSFGHSSFAD 380
+ ++ + Q S + +F ++ LERY++LI F Y+H E+ L + SF+
Sbjct: 390 KLEGIGEDYQTQGSSTKDYFLHGALQSLERYFYLIVFNAYLH-EQYPLAFA----CSFSQ 444
Query: 381 WMKARPELYSIIRRLLRRDPMGALGYANVKPSLMKMAESADGRPHEMGVVAALRNGQVLG 440
W+ + +Y + L M +S P ++ + +VL
Sbjct: 445 WLCSNAWIYRL---------------------LSCMNQSELRAPADL----VTKGARVLV 479
Query: 441 SQTVLKSDHCPGCQNQSLPERVEGAPNFREVSGFPVYGVANPTIDGIRSVIRRIGHFK-G 499
+ L D + + NFR V +YG+A PT + V+ + K
Sbjct: 480 ADEYLAPDVLSTIKEMKV-------ANFRRVPKMSIYGMAQPTSEAASVVLAYLCDEKRK 532
Query: 500 CCPVFWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVERMEARLKEDILREA 559
V W N+++E ++ N + F RE R + + E ++ +EA LK +L A
Sbjct: 533 HSSVLWVNLQDELLLEANNQIFSPREPTR-VEQCIRVCSAQPEDIQSLEASLKAQLL--A 589
Query: 560 ERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKYARVPITDGKAP 619
+ + + E I +S T E+F L+ ++Y R+P + AP
Sbjct: 590 SQQWLEVTLEQEKQMKMI---------KSCSTVQEIFNQLKSSHHALQYRRIPFPECSAP 640
Query: 620 KTSDFD-MLAVNIASASKD--TAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVLHE 676
FD +L V A+ ++D +AFVFNC G+ RTTT VIA L + G P E
Sbjct: 641 SEEGFDQLLDVMKATLAEDSLSAFVFNCSNGKARTTTAMVIATLTLWHFN-GFP--EFCE 697
Query: 677 DVTHEELDSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDNGVK 736
D D+ + GE ++ K+ RL +G +
Sbjct: 698 DEIVSVPDAKYTKGE-----------------------------FEVVMKLVRLLPDGQR 728
Query: 737 CREALDAIIDRCSALQNIREAVLHYRKVFNQQHVEPRV----RMVALSRGAEYLERYFRL 792
+ +DA +D S + + H R++ + + R + + YLERY L
Sbjct: 729 MKREVDAALDSVS--ETMTPLHYHLREIIICTYRQIRSCKSDAELLALQALLYLERYIYL 786
Query: 793 IAFAAYLGSEAFDGFCGQGESRMTFKSWLRQ 823
I + +YL E D + R F W++Q
Sbjct: 787 ILYNSYLHLEKRDSW------RRPFSVWMQQ 811
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 173/805 (21%), Positives = 312/805 (38%), Gaps = 164/805 (20%)
Query: 464 GAPNFREVSG-FPVYGVANPTIDGIRSVIRRIGHFKGCCPVFWHNMREEPVIYINGK--- 519
GAPNFR+ G FP+YG+ ++ G + V+ + +G V + +REEPV++++ +
Sbjct: 110 GAPNFRQSGGGFPLYGMGQTSLGGFKRVLESL-QTRGHQEVIFFCLREEPVVFLHLQEDF 168
Query: 520 -PFVLREVERPYKNMLEYTGIDRERVERMEARLKEDILREAERYGGAIMVIHETNDGQIF 578
P+ R E ++N+ + ++R + ++ E + A + N ++
Sbjct: 169 LPYTPRRKENLHENL--------QHLQRGASSEDLELTIRKELHDFAKL---NDNMFYVY 217
Query: 579 DAWEHVSSESVQTPLEVFKCLEDD-------------GFP-IKYARVPITDGKAPKTSDF 624
+ EH+ E P ++ C E+D P +Y R+P+ AP F
Sbjct: 218 NDIEHLKGE----PQKICICSEEDIHITEEVYRRPRFTMPAYRYYRLPLPMEGAPMEEQF 273
Query: 625 DM----------LAVNIASASKDTAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVL 674
D L++N ++ A +F+CQ+G GRT G ++ L+ + + R
Sbjct: 274 DAFVKVLRENPSLSLNRDASRLLPALLFSCQVGVGRTNLGLILGTLVMMHL-----TRTT 328
Query: 675 HEDVTHEELDSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDNG 734
E T E +V+ E K + I+ L+ K+ + G
Sbjct: 329 AEKTTPAE----------------------EEVKDEHKIQFRVIES--LIGKLPK----G 360
Query: 735 VKCREALDAIIDRCSALQNIREAVLHYRKVF-----NQQHVEPRVRMVALSRGAEYLERY 789
+ E ++ ID CS + +IRE++ ++ + Q + L + LERY
Sbjct: 361 QEVMEEVNRAIDLCSEMHDIRESIYENKQKLEGIGEDYQTQGSSTKDYFLHGALQSLERY 420
Query: 790 FRLIAFAAYLGSEAFDGFCGQGESRMTFKSWLRQRPEVQAMKWSIRIRPGRFLTVPEELR 849
F LI F AYL + F +F WL + W R+ ELR
Sbjct: 421 FYLIVFNAYLHEQYPLAFA------CSFSQWL------CSNAWIYRLLS---CMNQSELR 465
Query: 850 APQESQHGDAVMEAIVRARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVYKVDGYPV 909
AP A + + VL + Y P S I+ + +V +
Sbjct: 466 AP-----------ADLVTKGARVL----VADEYLAPD--VLSTIKEMKVANFRRVPKMSI 508
Query: 910 YSMATPTISGAKEMLAYLGAKTKTEGSFSQKVILTDLREEAVVYINGTPFVLRELNKPVD 969
Y MA PT A +LAYL + + S V+ +L++E ++ N F RE +
Sbjct: 509 YGMAQPTSEAASVVLAYLCDEKRKHSS----VLWVNLQDELLLEANNQIFSPREPTRVEQ 564
Query: 970 TLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHREEYNPASNQSSVVGYWENIFAD 1029
++ ++ +EA LK +L Q + L +E+ S V
Sbjct: 565 CIRVCSAQPEDIQSLEASLKAQLLAS--QQWLEVTLEQEKQMKMIKSCSTV--------- 613
Query: 1030 DVKTPAEVYAALQDEGYNITYRRIPLTR----ERDALASDIDAIQ-YCKDDSAGCYLFVS 1084
E++ L+ + + YRRIP + +D ++ +DS ++F
Sbjct: 614 -----QEIFNQLKSSHHALQYRRIPFPECSAPSEEGFDQLLDVMKATLAEDSLSAFVFNC 668
Query: 1085 HTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGPHLPLTYEENLPSWASDEEAHKMGDY 1144
G AM I L L F +V ++P + + G++
Sbjct: 669 SNGKARTTTAMVIATLTLWHFNGFPEFCEDEIV----------SVP-----DAKYTKGEF 713
Query: 1145 RDILNLTRVLVYGPQSKADVDTIIERCAGAG-----HLRDDILHYSEELKKFSNEYDEQR 1199
++ L R+L G + K +VD ++ + HLR+ I+ +++ ++ +
Sbjct: 714 EVVMKLVRLLPDGQRMKREVDAALDSVSETMTPLHYHLREIIICTYRQIRSCKSDAELLA 773
Query: 1200 AYLMDIGIKALRRYFFLITFRSFLY 1224
+ L RY +LI + S+L+
Sbjct: 774 L----QALLYLERYIYLILYNSYLH 794
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 151/367 (41%), Gaps = 54/367 (14%)
Query: 896 HGAPHVYKVDG-YPVYSMATPTISGAKEMLAYLGAKTKTEGSFSQKVILTDLREEAVVYI 954
+GAP+ + G +P+Y M ++ G K +L L +T G Q+VI LREE VV++
Sbjct: 109 YGAPNFRQSGGGFPLYGMGQTSLGGFKRVLESL----QTRGH--QEVIFFCLREEPVVFL 162
Query: 955 ----NGTPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILTEVRQSGGRMLLHRE-E 1009
+ P+ R + L+H+ G E +E +++++ + + ++ + E
Sbjct: 163 HLQEDFLPYTPRRKENLHENLQHLQ-RGASSEDLELTIRKELHDFAKLNDNMFYVYNDIE 221
Query: 1010 YNPASNQSSVVGYWENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDA- 1068
+ Q + E D+ EVY + Y R+PL E + DA
Sbjct: 222 HLKGEPQKICICSEE-----DIHITEEVYRRPRFTMPAYRYYRLPLPMEGAPMEEQFDAF 276
Query: 1069 ---------IQYCKDDS--AGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLV 1117
+ +D S LF G G + + +LV
Sbjct: 277 VKVLRENPSLSLNRDASRLLPALLFSCQVGVGRTNLGLIL----------------GTLV 320
Query: 1118 GPHLP-LTYEENLPSWASDEEAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAGH 1176
HL T E+ P+ ++ HK+ +R I +L L G + +V+ I+ C+
Sbjct: 321 MMHLTRTTAEKTTPAEEEVKDEHKI-QFRVIESLIGKLPKGQEVMEEVNRAIDLCSEMHD 379
Query: 1177 LRDDILHYSEELKKFSNEYDEQ----RAYLMDIGIKALRRYFFLITFRSFLYCTSPAEI- 1231
+R+ I ++L+ +Y Q + Y + +++L RYF+LI F ++L+ P
Sbjct: 380 IRESIYENKQKLEGIGEDYQTQGSSTKDYFLHGALQSLERYFYLIVFNAYLHEQYPLAFA 439
Query: 1232 -NFKSWM 1237
+F W+
Sbjct: 440 CSFSQWL 446
>sp|P70261|PALD_MOUSE Paladin OS=Mus musculus GN=Pald1 PE=1 SV=1
Length = 859
Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 197/816 (24%), Positives = 326/816 (39%), Gaps = 164/816 (20%)
Query: 44 GAPNYRQA-DSLRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGR- 101
GAPN+RQ L V G+ P++ G R VL+ + Q DG + + + +REEPVV++
Sbjct: 122 GAPNFRQVRGGLPVFGMGQPSLLGFRRVLQKL--QTDGLK-ECIIFCVREEPVVFLRAEE 178
Query: 102 ---PFVLRDVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQM 158
+ RD NL + E +E ++++I A N V D +
Sbjct: 179 DFVSYTPRDKESLHENLRDPSPG-VKAENLELAIQKEIHDFAQLRDNVYHVYHNTEDLR- 236
Query: 159 VDQWEPVSC-----DSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKIS 213
EP + D V +V++ + Y +P+ ++ P E FD V +
Sbjct: 237 ---GEPHTVAIRGEDGVCVTEEVFKRPLLLQPTYRYHHLPLPEQGPPLEAQFDAFVSVLR 293
Query: 214 QTDLN----------TEVIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFD 263
+T ++F+CQ G GRT GMV+ TLV + RT S +
Sbjct: 294 ETPSLLPLRDNHGPLPALLFSCQSGVGRTNLGMVLGTLVMFHH------SRTTS---QLE 344
Query: 264 SGSSVADNLPNSEEAIRRGEYAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQNLREAIAT 323
+ S +A LP ++ VI+ + G + +VD+ I CA + +L+E +
Sbjct: 345 AASPLAKPLPME-------QFQVIQGFICKVPQGKKMVEEVDRAISACAELHDLKEEVLK 397
Query: 324 YRNSI------LRQPDEMKRQASLSFFVEYLERYYFLICFAVYIHTERAALCSSSFGHSS 377
+ + R + +QA + LE Y++L+ F Y+H E+ L + S
Sbjct: 398 NQRRLESFRPESRGQECGSQQAVQQRALWSLELYFYLLLFNYYLH-EQYPLAFA----LS 452
Query: 378 FADWMKARPELYSIIRRLLRRDPMGALGYANVKPSLMKMAESADGRPHEMGVVAALRNGQ 437
F+ W+ PELY ++ E+ V L G
Sbjct: 453 FSRWLCTHPELYRLLV--------------------------------ELNSVGPLVPGD 480
Query: 438 VLGSQTVLKSDHCPGCQNQSLPERVEGAPNFREVSGFPVYGVANPTIDGIRSVIRRIGHF 497
++ + L++D S ++ A NFR V P+YG A P+ + +++ +
Sbjct: 481 LIAKGS-LEADDLVSLDALSTVREMDVA-NFRRVPRMPIYGTAQPSAKALGNILAYLSDA 538
Query: 498 K-GCCPVFWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVERMEARLKEDIL 556
K V W +REE V+ +G L + E + +EA+LK +
Sbjct: 539 KRKLRQVVWIFLREEVVLECDGHTHSLWP---------PGPALAPEHLVALEAQLKAHL- 588
Query: 557 REAERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKYARVPITDG 616
A + ++ F + T EVF + + Y R+P+ D
Sbjct: 589 -------SAPVPNTKSPTAPRF--------QKCLTTQEVFSQHQGACLGLTYCRIPVPDF 633
Query: 617 KAPKTSDFDMLAVNI-ASASKD--TAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRV 673
AP+ DFD L + A+ +KD T FVF+C G+GRTTT V+A L I G P
Sbjct: 634 CAPREEDFDRLLEALRAALTKDPGTGFVFSCLSGQGRTTTAMVVAVLACWHIG-GCP--- 689
Query: 674 LHEDVTHEELDSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDN 733
+V EEL S + F + ++ K+ +L +
Sbjct: 690 ---EVGEEELVSVPDA-------------------------KFTKGEFQVVMKVVQLLPD 721
Query: 734 GVKCREALDAIIDRCSALQ-----NIREAVLH-YRKVFNQQHVEPRVRMVALSRGAEYLE 787
G ++ +DA +D S ++RE ++ YR+ + + R+ R +YLE
Sbjct: 722 GHHVKKEVDAALDIVSETMTPMHYHLREIIISTYRQAKATKEAQEAQRLQL--RSLQYLE 779
Query: 788 RYFRLIAFAAYLGSEAFDGFCGQGESRMTFKSWLRQ 823
RY LI F AYL E + + F +W+R+
Sbjct: 780 RYIYLILFNAYLRLEKTSSW------QRPFSTWMRE 809
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 163/362 (45%), Gaps = 59/362 (16%)
Query: 47 NYRQADSLRVHGVAIPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGRPFVLR 106
N+R+ + ++G A P+ + + N+L ++ K R QV+WI LREE V+ +G L
Sbjct: 508 NFRRVPRMPIYGTAQPSAKALGNILAYLSDAKRKLR-QVVWIFLREEVVLECDGHTHSLW 566
Query: 107 DVGRPFSNLEYTGINRARVEQMEARLKEDIIMEAARFGNKILVTDELPDGQMVDQWEPVS 166
G + + + A + A RF K L T E
Sbjct: 567 PPGPALAPEHLVALEAQLKAHLSAPVPNTKSPTAPRF-QKCLTTQE-------------- 611
Query: 167 CDSVKAPLDVYEELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT---DLNTEVIF 223
V+ + Q + Y R+PV D +P+E+DFD L++ + D T +F
Sbjct: 612 ---------VFSQHQGACLGLTYCRIPVPDFCAPREEDFDRLLEALRAALTKDPGTGFVF 662
Query: 224 NCQMGRGRTTTGMVIATLVYLNRIGASGIPRTNSIGRVFDSGSSVADNLPNSEEAIRRGE 283
+C G+GRTTT MV+A L + IG + G ++P+++ +GE
Sbjct: 663 SCLSGQGRTTTAMVVAVLACWH------------IGGCPEVGEEELVSVPDAK--FTKGE 708
Query: 284 YAVIRSLTRVLEGGVEGKRQVDKVIDKCASMQ-----NLRE-AIATYRNS-ILRQPDEMK 336
+ V+ + ++L G K++VD +D + +LRE I+TYR + ++ E +
Sbjct: 709 FQVVMKVVQLLPDGHHVKKEVDAALDIVSETMTPMHYHLREIIISTYRQAKATKEAQEAQ 768
Query: 337 RQASLSFFVEYLERYYFLICFAVYIHTERAALCSSSFGHSSFADWMK---ARPELYSIIR 393
R S ++YLERY +LI F Y+ E+ +S F+ WM+ + +Y I+
Sbjct: 769 RLQLRS--LQYLERYIYLILFNAYLRLEK-----TSSWQRPFSTWMREVATKAGIYEILN 821
Query: 394 RL 395
+L
Sbjct: 822 QL 823
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 179/828 (21%), Positives = 304/828 (36%), Gaps = 196/828 (23%)
Query: 464 GAPNFREV-SGFPVYGVANPTIDGIRSVIRRIGHFKGCCPVFWHNMREEPVIYINGK--- 519
GAPNFR+V G PV+G+ P++ G R V++++ G +REEPV+++ +
Sbjct: 122 GAPNFRQVRGGLPVFGMGQPSLLGFRRVLQKL-QTDGLKECIIFCVREEPVVFLRAEEDF 180
Query: 520 -PFVLREVERPYKNMLEYT-GIDRERVERMEARLKEDILREAERYGGAIMVIHETNDGQI 577
+ R+ E ++N+ + + G+ + E +E ++++I A+ V H T D
Sbjct: 181 VSYTPRDKESLHENLRDPSPGV---KAENLELAIQKEIHDFAQLRDNVYHVYHNTED--- 234
Query: 578 FDAWEHVSS----ESVQTPLEVFKCLEDDGFPIKYARVPITDGKAPKTSDFDMLAVNIAS 633
H + + V EVFK +Y +P+ + P + FD +
Sbjct: 235 LRGEPHTVAIRGEDGVCVTEEVFKRPLLLQPTYRYHHLPLPEQGPPLEAQFDAFVSVLRE 294
Query: 634 AS-----KDT-----AFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIRVLHEDVTHEEL 683
+D A +F+CQ G GRT G V+ L+ + H T +L
Sbjct: 295 TPSLLPLRDNHGPLPALLFSCQSGVGRTNLGMVLGTLV-----------MFHHSRTTSQL 343
Query: 684 DSGSSSGEENGGNGAASTSSISKVRSEGKGRAFGIDDILLLWKITRLFDNGVKCREALDA 743
++ S + ++ ++ G K E +D
Sbjct: 344 EAASP-----------------------LAKPLPMEQFQVIQGFICKVPQGKKMVEEVDR 380
Query: 744 IIDRCSALQNIREAVLHYRKVF-------------NQQHVEPRVRMVALSRGAEYLERYF 790
I C+ L +++E VL ++ +QQ V+ R L Y
Sbjct: 381 AISACAELHDLKEEVLKNQRRLESFRPESRGQECGSQQAVQQRALWSLELYFYLLLFNY- 439
Query: 791 RLIAFAAYLGSEAFDGFCGQGESRMTFKSWLRQRPEVQAMKWSIR-IRPGRFLTVPEELR 849
YL + F ++F WL PE+ + + + P VP +L
Sbjct: 440 -------YLHEQYPLAFA------LSFSRWLCTHPELYRLLVELNSVGP----LVPGDLI 482
Query: 850 APQESQHGDAV-MEAIVRARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVYKVDGYP 908
A + D V ++A+ R V + +M P
Sbjct: 483 AKGSLEADDLVSLDALSTVREMDVANFRRVPRM--------------------------P 516
Query: 909 VYSMATPTISGAKEMLAYLG-AKTKTEGSFSQKVILTDLREEAVVYINGTPFVLRELNKP 967
+Y A P+ +LAYL AK K ++V+ LREE V+ +G L
Sbjct: 517 IYGTAQPSAKALGNILAYLSDAKRKL-----RQVVWIFLREEVVLECDGHTHSLWP---- 567
Query: 968 VDTLKHVGITGPVV--EHM---EARLKEDILTEVRQSGGRMLLHREEYNPASNQSSVVGY 1022
GP + EH+ EA+LK + V P + + +
Sbjct: 568 ---------PGPALAPEHLVALEAQLKAHLSAPV---------------PNTKSPTAPRF 603
Query: 1023 WENIFADDVKTPAEVYAALQDEGYNITYRRIPLTRERDALASDIDAI------QYCKDDS 1076
+ + T EV++ Q +TY RIP+ D D + KD
Sbjct: 604 QKCL------TTQEVFSQHQGACLGLTYCRIPVPDFCAPREEDFDRLLEALRAALTKDPG 657
Query: 1077 AGCYLFVSHTGFGGVAYAMAIICLRLDAEANFASKVPQSLVGPHLPLTYEENLPSWASDE 1136
G ++F +G G AM + L P+ VG EE L S D
Sbjct: 658 TG-FVFSCLSGQGRTTTAMVVAVL----ACWHIGGCPE--VG-------EEELVS-VPDA 702
Query: 1137 EAHKMGDYRDILNLTRVLVYGPQSKADVDTIIERCAGAG-----HLRDDILHYSEELKKF 1191
+ K G+++ ++ + ++L G K +VD ++ + HLR+ I+ + K
Sbjct: 703 KFTK-GEFQVVMKVVQLLPDGHHVKKEVDAALDIVSETMTPMHYHLREIIISTYRQAKAT 761
Query: 1192 SNEYDEQRAYLMDIGIKALRRYFFLITFRSFLYC--TSPAEINFKSWM 1237
+ QR L + + L RY +LI F ++L TS + F +WM
Sbjct: 762 KEAQEAQRLQLRSL--QYLERYIYLILFNAYLRLEKTSSWQRPFSTWM 807
>sp|Q79LY0|HOPD2_PSESM Effector protein hopD2 OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=hopD2 PE=1 SV=1
Length = 468
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 61 IPTIEGIRNVLKHIGAQKDGKRVQVLWISLREEPVVYINGRPFVLRDVGRPFSNLEYTGI 120
I ++E ++++ +G G + VL LREE +NG P LR +++
Sbjct: 231 ISSVEQVKSIRAALG----GGPLTVL--DLREESHAIVNGLPITLR------GPMDWAN- 277
Query: 121 NRARVEQMEARLKED-IIMEAARFGNKILVTDELPDGQMVD-QWEPVSCDSVKAPLDVYE 178
A + Q++ +E +I E R + LV G+ + Q + +V++ +V
Sbjct: 278 --AGLSQVDGAARESAMITELKRTKSLTLVDANYVKGKKSNPQTTELKNLNVRSEREVVT 335
Query: 179 ELQVEGYLVDYERVPVTDEKSPKEQDFDILVDKISQT-DLNTEVIFNCQMGRGRTTTGMV 237
E Y RV +TD P + D LVD + N ++ +C GRGRTTT M+
Sbjct: 336 EAGAT-----YRRVAITDHNRPSPEATDELVDIMRHCLQANESLVVHCNGGRGRTTTAMI 390
Query: 238 IATLV 242
+ ++
Sbjct: 391 MVDML 395
Score = 35.0 bits (79), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 491 IRRIGHFKGCCPVFWHNMREEPVIYINGKPFVLR-EVERPYKNMLEYTGIDRERVERME- 548
++ I G P+ ++REE +NG P LR ++ + + G RE E
Sbjct: 237 VKSIRAALGGGPLTVLDLREESHAIVNGLPITLRGPMDWANAGLSQVDGAARESAMITEL 296
Query: 549 ARLKEDILREAERYGGAIMVIHETNDGQIFDAWEHVSSESVQTPLEVFKCLEDDGFPIKY 608
R K L +A G + ++ Q + + + +V++ EV + + G Y
Sbjct: 297 KRTKSLTLVDANYVKG------KKSNPQTTE----LKNLNVRSEREV---VTEAG--ATY 341
Query: 609 ARVPITDGKAPKTSDFDMLAVNIA--SASKDTAFVFNCQMGRGRTTTGTVIACLLK 662
RV ITD P D L V+I + + V +C GRGRTTT ++ +LK
Sbjct: 342 RRVAITDHNRPSPEATDEL-VDIMRHCLQANESLVVHCNGGRGRTTTAMIMVDMLK 396
>sp|Q57668|Y215_METJA Uncharacterized protein MJ0215 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0215 PE=4 SV=1
Length = 159
Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 192 VPVTDEKSPKEQDFDILVDKIS-QTDLNTEVIFNCQMGRGRTTTGMVIATLVYLNRI 247
VP+ D P +D D++VD I EV+ +C G GR TG V+A LN I
Sbjct: 70 VPIEDYGIPTVEDMDLIVDFIKYHVSKEKEVVVSCIGGHGR--TGTVLAVWAGLNGI 124
>sp|A8NZY7|DUS3_COPC7 tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=DUS3 PE=3 SV=1
Length = 676
Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 690 GEENGGNGAASTSSISKVRSEG-----KGRAFGI--DDILLLWKITR--LFDNGVKCR 738
GE++ GNG S +++K + + KGR FG D++ L WK+ + D G CR
Sbjct: 43 GEDDSGNGQPSRRALAKAQKKARQGANKGRRFGKVRDEVELCWKVANGAICDFGTSCR 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 482,279,355
Number of Sequences: 539616
Number of extensions: 21596855
Number of successful extensions: 52889
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 52769
Number of HSP's gapped (non-prelim): 48
length of query: 1254
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1125
effective length of database: 121,958,995
effective search space: 137203869375
effective search space used: 137203869375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)