Query 000851
Match_columns 1253
No_of_seqs 885 out of 4592
Neff 8.2
Searched_HMMs 46136
Date Tue Apr 2 00:23:41 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000851.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000851hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 4E-223 9E-228 2033.6 128.1 1206 34-1246 12-1227(1228)
2 PTZ00265 multidrug resistance 100.0 8E-178 2E-182 1759.8 153.8 1198 33-1244 43-1465(1466)
3 KOG0054 Multidrug resistance-a 100.0 7E-162 1E-166 1528.3 128.4 1091 122-1245 265-1376(1381)
4 PLN03130 ABC transporter C fam 100.0 2E-158 4E-163 1589.1 146.7 1150 53-1246 304-1476(1622)
5 PLN03232 ABC transporter C fam 100.0 8E-158 2E-162 1585.5 144.7 1149 53-1247 304-1474(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 2E-152 4E-157 1535.7 150.2 1168 35-1244 306-1520(1522)
7 PTZ00243 ABC transporter; Prov 100.0 1E-145 3E-150 1462.8 147.6 1171 34-1246 232-1548(1560)
8 TIGR01271 CFTR_protein cystic 100.0 2E-143 5E-148 1442.1 147.2 1141 60-1248 90-1456(1490)
9 KOG0058 Peptide exporter, ABC 100.0 4E-113 8E-118 1004.3 68.4 572 35-616 133-707 (716)
10 KOG0058 Peptide exporter, ABC 100.0 7E-110 2E-114 976.6 67.0 576 668-1249 134-709 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 6E-106 1E-110 993.6 71.3 578 33-614 648-1226(1228)
12 COG2274 SunT ABC-type bacterio 100.0 3.7E-95 8E-100 893.0 73.2 570 34-613 139-708 (709)
13 COG2274 SunT ABC-type bacterio 100.0 7E-93 1.5E-97 872.8 71.0 565 668-1244 144-708 (709)
14 PRK11174 cysteine/glutathione 100.0 1.2E-89 2.6E-94 860.6 75.4 570 35-615 8-586 (588)
15 PTZ00265 multidrug resistance 100.0 8.4E-89 1.8E-93 906.7 77.1 569 36-613 812-1465(1466)
16 COG1132 MdlB ABC-type multidru 100.0 2.4E-88 5.3E-93 843.8 76.2 562 37-614 4-565 (567)
17 TIGR00958 3a01208 Conjugate Tr 100.0 4.4E-87 9.6E-92 848.3 75.7 564 34-609 146-710 (711)
18 PRK11160 cysteine/glutathione 100.0 6E-86 1.3E-90 820.3 75.8 567 37-611 4-572 (574)
19 COG1132 MdlB ABC-type multidru 100.0 4.1E-86 8.8E-91 823.8 74.3 554 679-1246 13-566 (567)
20 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7E-86 1.5E-90 838.8 77.5 563 36-613 122-685 (686)
21 PRK11174 cysteine/glutathione 100.0 1.2E-85 2.6E-90 824.4 75.5 568 669-1246 10-586 (588)
22 TIGR01193 bacteriocin_ABC ABC- 100.0 1.9E-85 4E-90 837.8 76.2 565 35-611 142-707 (708)
23 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.6E-85 7.9E-90 836.2 75.7 566 35-610 140-709 (710)
24 TIGR00958 3a01208 Conjugate Tr 100.0 1E-84 2.3E-89 826.6 73.7 564 668-1241 148-711 (711)
25 TIGR03375 type_I_sec_LssB type 100.0 2.1E-84 4.5E-89 826.4 74.8 557 35-602 133-689 (694)
26 PRK11176 lipid transporter ATP 100.0 6.3E-84 1.4E-88 808.6 76.8 569 35-614 11-580 (582)
27 KOG0056 Heavy metal exporter H 100.0 2E-87 4.4E-92 738.2 36.5 550 56-617 221-778 (790)
28 COG4988 CydD ABC-type transpor 100.0 2.8E-83 6E-88 740.6 69.8 552 55-615 5-557 (559)
29 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.2E-83 4.8E-88 815.9 75.7 554 677-1244 132-685 (686)
30 TIGR01846 type_I_sec_HlyB type 100.0 3.5E-83 7.6E-88 814.3 76.9 568 35-613 125-692 (694)
31 COG4988 CydD ABC-type transpor 100.0 3.9E-83 8.5E-88 739.3 69.8 552 686-1246 5-557 (559)
32 TIGR01193 bacteriocin_ABC ABC- 100.0 8E-83 1.7E-87 813.6 74.4 563 669-1242 144-707 (708)
33 PRK10790 putative multidrug tr 100.0 2.5E-82 5.4E-87 794.5 77.1 569 34-615 8-577 (592)
34 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.9E-82 4.1E-87 811.2 74.2 560 672-1241 145-709 (710)
35 PRK11160 cysteine/glutathione 100.0 3.9E-82 8.5E-87 786.1 74.9 565 671-1243 6-573 (574)
36 KOG0057 Mitochondrial Fe/S clu 100.0 7.9E-83 1.7E-87 722.3 62.1 573 34-614 10-587 (591)
37 TIGR02203 MsbA_lipidA lipid A 100.0 8.6E-82 1.9E-86 788.6 76.3 565 38-613 3-568 (571)
38 TIGR01192 chvA glucan exporter 100.0 2.6E-81 5.6E-86 779.6 78.1 566 36-614 6-571 (585)
39 TIGR02868 CydC thiol reductant 100.0 5.8E-82 1.3E-86 781.3 70.0 527 38-573 2-529 (529)
40 PRK11176 lipid transporter ATP 100.0 2.7E-81 5.8E-86 784.8 75.0 565 672-1246 16-581 (582)
41 PRK13657 cyclic beta-1,2-gluca 100.0 5E-81 1.1E-85 781.4 77.2 567 35-614 5-571 (588)
42 PRK10789 putative multidrug tr 100.0 2.2E-81 4.9E-86 779.3 73.5 544 63-615 8-552 (569)
43 TIGR03375 type_I_sec_LssB type 100.0 3E-81 6.6E-86 797.3 74.8 548 676-1232 142-689 (694)
44 PRK10790 putative multidrug tr 100.0 5.9E-81 1.3E-85 782.1 75.1 566 670-1247 12-578 (592)
45 KOG0056 Heavy metal exporter H 100.0 2.8E-84 6.1E-89 713.3 38.0 504 737-1246 272-776 (790)
46 TIGR01846 type_I_sec_HlyB type 100.0 2.8E-80 6.1E-85 787.6 76.3 558 677-1244 135-692 (694)
47 TIGR02204 MsbA_rel ABC transpo 100.0 7.5E-80 1.6E-84 771.4 76.8 569 37-613 6-575 (576)
48 KOG0057 Mitochondrial Fe/S clu 100.0 5.5E-81 1.2E-85 707.3 59.3 514 724-1246 74-588 (591)
49 COG4987 CydC ABC-type transpor 100.0 1E-79 2.2E-84 696.9 64.1 504 732-1242 66-571 (573)
50 TIGR02203 MsbA_lipidA lipid A 100.0 3.8E-79 8.3E-84 764.7 75.3 563 672-1244 5-568 (571)
51 PRK13657 cyclic beta-1,2-gluca 100.0 7.5E-79 1.6E-83 761.8 76.4 565 669-1245 7-571 (588)
52 TIGR02857 CydD thiol reductant 100.0 5.5E-79 1.2E-83 754.8 71.1 525 52-585 5-529 (529)
53 TIGR01192 chvA glucan exporter 100.0 5.1E-78 1.1E-82 750.1 76.1 566 669-1246 7-572 (585)
54 TIGR02868 CydC thiol reductant 100.0 9.8E-79 2.1E-83 752.5 68.9 522 674-1203 6-529 (529)
55 TIGR02204 MsbA_rel ABC transpo 100.0 4.1E-78 8.8E-83 755.7 75.0 566 673-1244 10-575 (576)
56 PRK10789 putative multidrug tr 100.0 6.5E-78 1.4E-82 748.3 72.4 514 726-1246 38-552 (569)
57 TIGR00957 MRP_assoc_pro multi 100.0 4.8E-78 1E-82 813.6 75.4 507 100-612 1010-1519(1522)
58 COG4987 CydC ABC-type transpor 100.0 8.4E-78 1.8E-82 681.3 64.5 554 49-611 15-571 (573)
59 TIGR01842 type_I_sec_PrtD type 100.0 2E-77 4.4E-82 741.4 72.9 533 52-601 8-542 (544)
60 COG5265 ATM1 ABC-type transpor 100.0 2.4E-80 5.1E-85 679.4 41.0 491 117-611 4-496 (497)
61 PLN03130 ABC transporter C fam 100.0 7.1E-77 1.5E-81 799.8 74.2 506 98-614 956-1475(1622)
62 COG5265 ATM1 ABC-type transpor 100.0 1.3E-78 2.7E-83 665.8 40.8 491 746-1242 4-496 (497)
63 TIGR02857 CydD thiol reductant 100.0 7.8E-76 1.7E-80 726.6 70.5 527 681-1215 3-529 (529)
64 COG1123 ATPase components of v 100.0 6.9E-78 1.5E-82 700.3 45.9 480 376-1243 5-531 (539)
65 PTZ00243 ABC transporter; Prov 100.0 1.2E-75 2.7E-80 787.2 74.6 505 107-613 1010-1546(1560)
66 PLN03232 ABC transporter C fam 100.0 1.4E-75 3E-80 788.7 71.5 509 98-613 953-1471(1495)
67 TIGR01842 type_I_sec_PrtD type 100.0 2.3E-74 4.9E-79 714.2 72.8 535 681-1231 6-542 (544)
68 TIGR01194 cyc_pep_trnsptr cycl 100.0 6.8E-74 1.5E-78 709.5 69.3 535 35-593 3-551 (555)
69 PRK10261 glutathione transport 100.0 7.8E-75 1.7E-79 724.1 48.8 497 376-1242 12-565 (623)
70 PRK13549 xylose transporter AT 100.0 8.5E-75 1.8E-79 711.1 45.3 462 376-1230 5-493 (506)
71 PRK15134 microcin C ABC transp 100.0 4.6E-74 9.9E-79 708.5 47.3 464 376-1233 5-517 (529)
72 PRK09700 D-allose transporter 100.0 1.3E-73 2.7E-78 702.1 46.2 459 376-1228 5-495 (510)
73 TIGR03269 met_CoM_red_A2 methy 100.0 2.2E-73 4.7E-78 701.6 43.4 453 377-1231 1-517 (520)
74 TIGR01271 CFTR_protein cystic 100.0 1.9E-70 4.1E-75 737.3 74.5 503 107-617 937-1456(1490)
75 PRK10762 D-ribose transporter 100.0 7.6E-73 1.6E-77 693.0 46.7 454 376-1230 4-483 (501)
76 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.4E-70 3E-75 680.0 65.9 534 668-1223 4-551 (555)
77 PRK11288 araG L-arabinose tran 100.0 4.2E-73 9.1E-78 695.3 42.0 456 376-1230 4-484 (501)
78 COG4172 ABC-type uncharacteriz 100.0 2.3E-72 4.9E-77 611.0 42.2 470 376-1240 6-525 (534)
79 PRK15439 autoinducer 2 ABC tra 100.0 2.4E-72 5.2E-77 688.8 47.8 471 376-1241 11-500 (510)
80 COG4618 ArpD ABC-type protease 100.0 4.3E-71 9.3E-76 619.9 52.9 498 724-1232 63-561 (580)
81 COG4618 ArpD ABC-type protease 100.0 6.5E-71 1.4E-75 618.5 53.7 532 56-602 29-561 (580)
82 TIGR02633 xylG D-xylose ABC tr 100.0 3.3E-72 7.2E-77 688.4 47.3 459 377-1228 2-489 (500)
83 TIGR01257 rim_protein retinal- 100.0 1.5E-68 3.3E-73 706.3 78.6 216 375-602 927-1150(2272)
84 PRK10982 galactose/methyl gala 100.0 8.9E-72 1.9E-76 682.5 43.9 453 379-1229 1-478 (491)
85 PRK10938 putative molybdenum t 100.0 3.9E-71 8.6E-76 677.2 44.0 452 377-1224 4-485 (490)
86 PRK10522 multidrug transporter 100.0 8.2E-68 1.8E-72 655.5 69.1 525 41-598 5-536 (547)
87 KOG0054 Multidrug resistance-a 100.0 7.2E-69 1.6E-73 681.3 60.7 509 97-611 860-1373(1381)
88 PRK15064 ABC transporter ATP-b 100.0 2.1E-69 4.5E-74 667.2 54.0 479 377-1231 2-525 (530)
89 TIGR00956 3a01205 Pleiotropic 100.0 7.4E-69 1.6E-73 715.7 57.5 212 1005-1227 759-989 (1394)
90 PRK11819 putative ABC transpor 100.0 1.9E-67 4.2E-72 651.4 51.6 482 376-1232 6-534 (556)
91 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 8.5E-67 1.9E-71 645.8 55.1 480 376-1231 4-531 (552)
92 TIGR00954 3a01203 Peroxysomal 100.0 9.7E-66 2.1E-70 644.5 63.6 532 36-587 78-653 (659)
93 PRK10522 multidrug transporter 100.0 2.3E-65 5E-70 633.6 65.2 472 738-1231 62-539 (547)
94 PRK10636 putative ABC transpor 100.0 1.2E-65 2.6E-70 641.3 51.2 201 1005-1231 312-517 (638)
95 PLN03140 ABC transporter G fam 100.0 2.3E-64 5.1E-69 668.5 60.4 213 1005-1227 867-1106(1470)
96 PRK11147 ABC transporter ATPas 100.0 3.9E-64 8.5E-69 629.9 52.2 201 1005-1231 319-528 (635)
97 COG1129 MglA ABC-type sugar tr 100.0 1.4E-64 3E-69 585.6 43.5 454 376-1227 8-486 (500)
98 PLN03073 ABC transporter F fam 100.0 2.8E-64 6E-69 629.1 46.3 200 1005-1230 508-713 (718)
99 TIGR00954 3a01203 Peroxysomal 100.0 3.7E-61 8.1E-66 603.1 63.2 529 669-1217 79-653 (659)
100 PRK13409 putative ATPase RIL; 100.0 6.9E-64 1.5E-68 615.7 37.3 437 380-1225 77-536 (590)
101 COG3845 ABC-type uncharacteriz 100.0 3.3E-62 7.1E-67 551.5 41.4 462 376-1228 4-489 (501)
102 COG0488 Uup ATPase components 100.0 4.8E-61 1E-65 573.4 47.4 485 376-1232 3-526 (530)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 6.5E-53 1.4E-57 472.1 27.3 237 1004-1244 1-237 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 1.6E-51 3.5E-56 418.4 21.6 215 376-603 2-227 (240)
105 COG1126 GlnQ ABC-type polar am 100.0 1.2E-50 2.6E-55 412.0 21.2 217 1005-1235 2-229 (240)
106 cd03289 ABCC_CFTR2 The CFTR su 100.0 3E-49 6.4E-54 442.6 27.4 237 375-613 1-237 (275)
107 COG1135 AbcC ABC-type metal io 100.0 2.1E-49 4.5E-54 423.2 20.3 216 377-603 2-233 (339)
108 COG1125 OpuBA ABC-type proline 100.0 1.6E-49 3.6E-54 410.6 18.6 214 377-603 2-227 (309)
109 COG1135 AbcC ABC-type metal io 100.0 4E-49 8.7E-54 421.0 21.0 226 1006-1242 2-243 (339)
110 KOG0927 Predicted transporter 100.0 6.6E-48 1.4E-52 435.7 29.5 198 1005-1227 389-592 (614)
111 PRK14257 phosphate ABC transpo 100.0 4E-48 8.7E-53 444.7 25.7 227 1000-1234 75-316 (329)
112 COG1117 PstB ABC-type phosphat 100.0 9.7E-49 2.1E-53 395.4 18.0 219 375-602 6-238 (253)
113 COG1117 PstB ABC-type phosphat 100.0 1.4E-48 3E-53 394.4 18.4 220 1005-1234 7-240 (253)
114 COG1125 OpuBA ABC-type proline 100.0 4.9E-48 1.1E-52 399.7 18.8 221 1006-1240 2-234 (309)
115 COG4615 PvdE ABC-type sideroph 100.0 3.6E-44 7.7E-49 389.3 47.2 465 107-593 60-529 (546)
116 cd03252 ABCC_Hemolysin The ABC 100.0 1.5E-46 3.3E-51 416.5 27.3 235 1006-1242 1-235 (237)
117 cd03288 ABCC_SUR2 The SUR doma 100.0 2.9E-46 6.3E-51 418.4 28.3 241 1002-1244 16-256 (257)
118 cd03252 ABCC_Hemolysin The ABC 100.0 4E-46 8.8E-51 413.1 27.6 235 377-611 1-235 (237)
119 PRK14257 phosphate ABC transpo 100.0 2.7E-46 5.9E-51 429.5 26.1 223 374-603 78-315 (329)
120 KOG0065 Pleiotropic drug resis 100.0 4.6E-45 1E-49 451.5 37.3 199 1020-1228 803-1018(1391)
121 COG1127 Ttg2A ABC-type transpo 100.0 7.2E-46 1.6E-50 383.1 21.9 220 375-607 7-241 (263)
122 COG3839 MalK ABC-type sugar tr 100.0 1.2E-45 2.5E-50 412.9 23.0 213 376-603 3-225 (338)
123 COG1120 FepC ABC-type cobalami 100.0 1.3E-45 2.9E-50 397.3 22.4 214 376-602 2-229 (258)
124 cd03253 ABCC_ATM1_transporter 100.0 4.1E-45 8.8E-50 405.0 26.9 234 1006-1242 1-234 (236)
125 COG2884 FtsE Predicted ATPase 100.0 8.9E-46 1.9E-50 367.4 18.8 208 377-596 2-221 (223)
126 COG3840 ThiQ ABC-type thiamine 100.0 1.4E-45 3.1E-50 362.3 19.6 211 377-604 2-222 (231)
127 cd03251 ABCC_MsbA MsbA is an e 100.0 4.7E-45 1E-49 403.9 26.2 233 1006-1240 1-233 (234)
128 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 6.1E-45 1.3E-49 404.0 26.8 235 1006-1241 1-235 (238)
129 cd03254 ABCC_Glucan_exporter_l 100.0 8E-45 1.7E-49 400.7 26.6 226 1004-1231 1-226 (229)
130 cd03251 ABCC_MsbA MsbA is an e 100.0 8.6E-45 1.9E-49 401.9 26.8 232 377-608 1-232 (234)
131 cd03288 ABCC_SUR2 The SUR doma 100.0 1.2E-44 2.7E-49 405.2 28.3 239 372-611 15-254 (257)
132 cd03244 ABCC_MRP_domain2 Domai 100.0 8.5E-45 1.8E-49 398.3 26.3 221 1004-1226 1-221 (221)
133 KOG0062 ATPase component of AB 100.0 9.4E-45 2E-49 408.1 27.0 211 1004-1245 361-575 (582)
134 COG3842 PotA ABC-type spermidi 100.0 1.3E-45 2.8E-50 414.8 18.9 214 375-603 4-228 (352)
135 COG1116 TauB ABC-type nitrate/ 100.0 4.5E-45 9.8E-50 384.5 21.5 198 376-591 3-212 (248)
136 COG1136 SalX ABC-type antimicr 100.0 1.3E-44 2.9E-49 382.1 24.9 206 377-592 2-222 (226)
137 COG1124 DppF ABC-type dipeptid 100.0 5.7E-45 1.2E-49 379.1 21.7 227 1005-1242 3-242 (252)
138 TIGR02314 ABC_MetN D-methionin 100.0 5.9E-45 1.3E-49 418.7 24.0 226 1006-1242 2-242 (343)
139 cd03253 ABCC_ATM1_transporter 100.0 2.1E-44 4.6E-49 399.2 27.4 233 377-610 1-233 (236)
140 COG1120 FepC ABC-type cobalami 100.0 4.9E-45 1.1E-49 392.9 21.2 221 1005-1241 2-236 (258)
141 cd03254 ABCC_Glucan_exporter_l 100.0 2E-44 4.4E-49 397.5 26.4 227 375-602 1-227 (229)
142 COG3839 MalK ABC-type sugar tr 100.0 6.7E-45 1.5E-49 406.8 22.6 219 1005-1239 3-231 (338)
143 COG1127 Ttg2A ABC-type transpo 100.0 1.1E-44 2.4E-49 374.3 21.9 226 1005-1244 8-248 (263)
144 COG1124 DppF ABC-type dipeptid 100.0 1.2E-44 2.6E-49 376.7 21.5 222 376-608 3-239 (252)
145 cd03244 ABCC_MRP_domain2 Domai 100.0 5.1E-44 1.1E-48 392.1 26.9 220 375-595 1-220 (221)
146 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 5.4E-44 1.2E-48 396.4 26.8 234 377-610 1-235 (238)
147 COG1122 CbiO ABC-type cobalt t 100.0 1.6E-44 3.5E-49 390.3 21.9 215 376-602 3-229 (235)
148 COG3638 ABC-type phosphate/pho 100.0 2.3E-44 5E-49 371.0 21.2 214 376-601 3-237 (258)
149 cd03245 ABCC_bacteriocin_expor 100.0 8E-44 1.7E-48 390.3 26.3 220 1004-1224 1-220 (220)
150 COG2884 FtsE Predicted ATPase 100.0 1.2E-44 2.5E-49 359.5 17.4 208 1006-1226 2-221 (223)
151 COG1122 CbiO ABC-type cobalt t 100.0 3.3E-44 7.1E-49 387.9 22.0 215 1005-1232 3-229 (235)
152 TIGR02314 ABC_MetN D-methionin 100.0 4.3E-44 9.4E-49 411.5 24.2 215 377-602 2-231 (343)
153 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.3E-44 1.6E-48 381.5 23.8 217 1005-1241 4-235 (254)
154 cd03245 ABCC_bacteriocin_expor 100.0 1.7E-43 3.7E-48 387.7 27.0 220 375-594 1-220 (220)
155 COG3840 ThiQ ABC-type thiamine 100.0 5.2E-44 1.1E-48 351.3 20.1 210 1006-1233 2-221 (231)
156 COG3638 ABC-type phosphate/pho 100.0 4.3E-44 9.2E-49 369.0 19.5 223 1005-1243 3-246 (258)
157 PRK13631 cbiO cobalt transport 100.0 2E-43 4.3E-48 404.7 27.2 220 1005-1231 21-265 (320)
158 cd03261 ABC_Org_Solvent_Resist 100.0 7.5E-44 1.6E-48 394.3 22.8 212 1006-1231 1-226 (235)
159 cd03248 ABCC_TAP TAP, the Tran 100.0 1.3E-43 2.9E-48 390.1 24.5 219 1002-1220 8-226 (226)
160 COG4615 PvdE ABC-type sideroph 100.0 8.8E-41 1.9E-45 362.9 45.5 473 728-1223 52-529 (546)
161 COG1116 TauB ABC-type nitrate/ 100.0 8.1E-44 1.8E-48 375.0 20.9 197 1005-1220 3-211 (248)
162 COG1136 SalX ABC-type antimicr 100.0 1.7E-43 3.8E-48 373.6 23.5 207 1006-1222 2-222 (226)
163 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.5E-43 3.3E-48 379.1 23.0 210 376-602 4-228 (254)
164 COG3842 PotA ABC-type spermidi 100.0 4E-44 8.8E-49 402.6 19.1 222 1004-1241 4-236 (352)
165 COG4178 ABC-type uncharacteriz 100.0 9.3E-40 2E-44 385.9 56.6 468 100-586 91-587 (604)
166 cd03260 ABC_PstB_phosphate_tra 100.0 9.4E-44 2E-48 391.5 21.2 212 1006-1229 1-227 (227)
167 PRK13631 cbiO cobalt transport 100.0 5.5E-43 1.2E-47 401.1 27.6 220 376-602 21-266 (320)
168 COG4178 ABC-type uncharacteriz 100.0 6.1E-40 1.3E-44 387.5 53.6 474 725-1216 87-587 (604)
169 cd03261 ABC_Org_Solvent_Resist 100.0 2.4E-43 5.3E-48 390.2 23.4 217 377-606 1-231 (235)
170 COG1118 CysA ABC-type sulfate/ 100.0 9E-44 2E-48 378.8 18.9 215 376-603 2-229 (345)
171 PRK14269 phosphate ABC transpo 100.0 3.4E-43 7.3E-48 391.5 24.4 219 1005-1233 2-232 (246)
172 PRK11650 ugpC glycerol-3-phosp 100.0 3.5E-43 7.6E-48 407.6 24.4 219 1005-1238 3-231 (356)
173 PRK13650 cbiO cobalt transport 100.0 3.8E-43 8.1E-48 397.3 24.0 217 1005-1232 4-230 (279)
174 PRK11432 fbpC ferric transport 100.0 2.8E-43 6E-48 407.2 23.3 219 1005-1239 6-234 (351)
175 PRK14250 phosphate ABC transpo 100.0 6.2E-43 1.3E-47 387.9 25.0 225 1005-1242 3-232 (241)
176 PRK11153 metN DL-methionine tr 100.0 5.5E-43 1.2E-47 405.9 24.2 222 1006-1238 2-237 (343)
177 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.4E-42 2.9E-47 376.5 25.1 205 1002-1226 3-207 (207)
178 TIGR03265 PhnT2 putative 2-ami 100.0 7.3E-43 1.6E-47 404.5 23.8 218 1005-1238 4-231 (353)
179 cd03248 ABCC_TAP TAP, the Tran 100.0 1.4E-42 3.1E-47 381.9 25.0 218 373-590 8-226 (226)
180 PRK11650 ugpC glycerol-3-phosp 100.0 1.1E-42 2.4E-47 403.5 25.3 214 376-603 3-226 (356)
181 cd03260 ABC_PstB_phosphate_tra 100.0 8.8E-43 1.9E-47 383.8 23.2 212 377-599 1-227 (227)
182 PRK11432 fbpC ferric transport 100.0 1.1E-42 2.4E-47 402.3 24.3 213 376-603 6-228 (351)
183 PRK14273 phosphate ABC transpo 100.0 1.5E-42 3.2E-47 388.4 24.4 224 1005-1238 7-245 (254)
184 PRK13647 cbiO cobalt transport 100.0 1.4E-42 3E-47 391.6 24.0 213 1005-1230 4-226 (274)
185 PRK13637 cbiO cobalt transport 100.0 1.2E-42 2.5E-47 394.6 23.4 217 1006-1231 3-234 (287)
186 cd03219 ABC_Mj1267_LivG_branch 100.0 1.1E-42 2.3E-47 385.7 22.4 221 1006-1231 1-232 (236)
187 TIGR00972 3a0107s01c2 phosphat 100.0 1.8E-42 4E-47 386.0 24.4 222 1006-1237 2-238 (247)
188 TIGR01186 proV glycine betaine 100.0 9.7E-43 2.1E-47 402.2 22.7 208 1020-1238 5-226 (363)
189 cd03296 ABC_CysA_sulfate_impor 100.0 1.6E-42 3.4E-47 384.6 23.3 211 1006-1232 3-227 (239)
190 PRK14242 phosphate transporter 100.0 2E-42 4.3E-47 387.4 24.0 219 1005-1233 6-239 (253)
191 PRK13650 cbiO cobalt transport 100.0 2.5E-42 5.3E-47 390.7 24.9 216 376-602 4-230 (279)
192 cd03256 ABC_PhnC_transporter A 100.0 1.5E-42 3.3E-47 385.8 22.8 213 1006-1231 1-234 (241)
193 PRK10744 pstB phosphate transp 100.0 3.2E-42 6.9E-47 386.7 25.5 222 1003-1234 11-247 (260)
194 PRK09536 btuD corrinoid ABC tr 100.0 2E-42 4.3E-47 404.3 24.6 222 1005-1242 3-237 (402)
195 TIGR03265 PhnT2 putative 2-ami 100.0 1.5E-42 3.3E-47 401.9 23.4 213 376-603 4-226 (353)
196 PRK10851 sulfate/thiosulfate t 100.0 1.9E-42 4.1E-47 401.0 24.2 217 1006-1238 3-233 (353)
197 PRK09452 potA putrescine/sperm 100.0 2.8E-42 6.1E-47 401.2 25.3 217 1005-1237 14-240 (375)
198 PRK13643 cbiO cobalt transport 100.0 2.7E-42 5.9E-47 391.8 24.1 216 1006-1231 2-233 (288)
199 cd03263 ABC_subfamily_A The AB 100.0 1.8E-42 3.8E-47 379.6 21.8 211 1006-1229 1-219 (220)
200 PRK13635 cbiO cobalt transport 100.0 2.9E-42 6.3E-47 389.7 24.0 215 1005-1231 5-229 (279)
201 TIGR01186 proV glycine betaine 100.0 1.5E-42 3.2E-47 400.7 22.0 201 392-603 7-221 (363)
202 PRK13646 cbiO cobalt transport 100.0 2.1E-42 4.5E-47 392.7 22.9 220 1006-1232 3-236 (286)
203 TIGR00960 3a0501s02 Type II (G 100.0 1.2E-42 2.6E-47 379.7 20.0 203 1006-1220 2-216 (216)
204 PRK14269 phosphate ABC transpo 100.0 2.9E-42 6.3E-47 384.0 23.4 218 376-602 2-231 (246)
205 PRK14235 phosphate transporter 100.0 3.5E-42 7.5E-47 387.5 24.2 222 1003-1234 17-254 (267)
206 TIGR03258 PhnT 2-aminoethylpho 100.0 2.5E-42 5.4E-47 400.4 23.6 219 1004-1238 4-235 (362)
207 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.9E-42 4.2E-47 389.7 22.1 219 1007-1239 26-258 (269)
208 cd03258 ABC_MetN_methionine_tr 100.0 2.7E-42 5.9E-47 381.5 22.8 215 1006-1231 2-230 (233)
209 cd03219 ABC_Mj1267_LivG_branch 100.0 2.1E-42 4.5E-47 383.3 21.7 221 377-601 1-232 (236)
210 TIGR02315 ABC_phnC phosphonate 100.0 3.1E-42 6.7E-47 383.7 23.2 212 1006-1230 2-234 (243)
211 PRK14267 phosphate ABC transpo 100.0 3E-42 6.6E-47 385.9 23.1 225 1005-1239 4-245 (253)
212 cd03224 ABC_TM1139_LivF_branch 100.0 3.2E-42 7E-47 378.2 22.7 217 1006-1231 1-221 (222)
213 PRK13642 cbiO cobalt transport 100.0 4.7E-42 1E-46 388.2 24.7 217 1005-1232 4-230 (277)
214 cd03259 ABC_Carb_Solutes_like 100.0 1.5E-42 3.3E-47 378.0 19.8 203 1006-1224 1-213 (213)
215 PRK14247 phosphate ABC transpo 100.0 4E-42 8.8E-47 384.2 23.3 227 1005-1241 3-244 (250)
216 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.4E-42 7.5E-47 382.6 22.6 217 1006-1233 1-227 (242)
217 PRK11153 metN DL-methionine tr 100.0 5.8E-42 1.3E-46 397.3 24.9 215 377-602 2-231 (343)
218 PRK09452 potA putrescine/sperm 100.0 6E-42 1.3E-46 398.5 25.1 213 376-603 14-236 (375)
219 PRK13636 cbiO cobalt transport 100.0 5.1E-42 1.1E-46 388.9 23.9 214 1005-1231 5-231 (283)
220 TIGR00960 3a0501s02 Type II (G 100.0 3.1E-42 6.7E-47 376.4 21.3 203 377-590 2-216 (216)
221 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.9E-41 4.1E-46 381.1 28.1 220 1002-1241 36-256 (282)
222 PRK13635 cbiO cobalt transport 100.0 6.6E-42 1.4E-46 386.8 24.6 217 376-603 5-231 (279)
223 PRK11000 maltose/maltodextrin 100.0 5.1E-42 1.1E-46 400.9 24.2 218 1005-1238 3-230 (369)
224 PRK13634 cbiO cobalt transport 100.0 4.1E-42 8.9E-47 390.7 22.6 216 1006-1231 3-235 (290)
225 PRK13647 cbiO cobalt transport 100.0 8.4E-42 1.8E-46 385.3 24.8 212 376-599 4-225 (274)
226 PRK15079 oligopeptide ABC tran 100.0 7.1E-42 1.5E-46 393.3 24.5 226 1005-1240 8-260 (331)
227 TIGR03005 ectoine_ehuA ectoine 100.0 6.7E-42 1.4E-46 382.7 23.6 218 1006-1237 1-242 (252)
228 PRK10851 sulfate/thiosulfate t 100.0 5.5E-42 1.2E-46 397.2 23.6 212 376-602 2-227 (353)
229 TIGR03258 PhnT 2-aminoethylpho 100.0 5.1E-42 1.1E-46 397.8 23.2 214 375-603 4-230 (362)
230 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.7E-41 3.6E-46 368.0 25.8 202 375-595 5-206 (207)
231 PRK13637 cbiO cobalt transport 100.0 1.3E-41 2.8E-46 386.0 26.0 217 377-602 3-235 (287)
232 PRK14250 phosphate ABC transpo 100.0 1.4E-41 3.1E-46 377.0 25.6 215 376-602 3-222 (241)
233 PRK11831 putative ABC transpor 100.0 7.4E-42 1.6E-46 385.2 23.6 224 1005-1242 7-244 (269)
234 PRK14259 phosphate ABC transpo 100.0 1.1E-41 2.5E-46 383.4 25.1 221 1004-1234 12-256 (269)
235 PRK13651 cobalt transporter AT 100.0 8E-42 1.7E-46 389.3 23.9 217 1006-1232 3-255 (305)
236 cd03264 ABC_drug_resistance_li 100.0 6.1E-42 1.3E-46 372.7 21.9 203 1006-1224 1-211 (211)
237 PRK13643 cbiO cobalt transport 100.0 7.2E-42 1.6E-46 388.3 23.4 216 377-602 2-234 (288)
238 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.1E-41 2.4E-46 377.1 24.3 216 1006-1232 2-222 (236)
239 PRK11629 lolD lipoprotein tran 100.0 6.6E-42 1.4E-46 378.1 22.3 210 1005-1225 5-228 (233)
240 COG1118 CysA ABC-type sulfate/ 100.0 2.7E-42 5.8E-47 367.5 18.3 217 1005-1237 2-233 (345)
241 PRK14244 phosphate ABC transpo 100.0 4.4E-42 9.6E-47 383.9 21.0 222 1006-1237 6-243 (251)
242 cd03256 ABC_PhnC_transporter A 100.0 8.9E-42 1.9E-46 379.6 23.4 212 377-600 1-233 (241)
243 cd03296 ABC_CysA_sulfate_impor 100.0 1.1E-41 2.4E-46 377.9 24.0 211 377-602 3-227 (239)
244 cd03263 ABC_subfamily_A The AB 100.0 8.4E-42 1.8E-46 374.3 22.6 211 377-599 1-219 (220)
245 PRK14236 phosphate transporter 100.0 1.2E-41 2.7E-46 384.1 24.6 221 1003-1233 23-258 (272)
246 PRK09536 btuD corrinoid ABC tr 100.0 8.9E-42 1.9E-46 398.8 24.2 221 376-610 3-236 (402)
247 cd03265 ABC_DrrA DrrA is the A 100.0 7.9E-42 1.7E-46 374.2 22.3 209 1006-1229 1-219 (220)
248 PRK14274 phosphate ABC transpo 100.0 1.4E-41 3.1E-46 381.4 24.8 222 1005-1236 12-248 (259)
249 PRK13652 cbiO cobalt transport 100.0 1.1E-41 2.4E-46 385.2 24.0 213 1006-1231 4-227 (277)
250 PRK11607 potG putrescine trans 100.0 1.1E-41 2.4E-46 397.1 24.7 219 1004-1238 18-246 (377)
251 PRK14237 phosphate transporter 100.0 1.4E-41 3.1E-46 382.5 24.7 220 1004-1233 19-253 (267)
252 PRK14268 phosphate ABC transpo 100.0 1E-41 2.2E-46 382.1 23.5 223 1005-1237 12-248 (258)
253 PRK14251 phosphate ABC transpo 100.0 8E-42 1.7E-46 382.0 22.6 224 1005-1238 4-242 (251)
254 PRK10575 iron-hydroxamate tran 100.0 8.8E-42 1.9E-46 384.0 22.9 221 1005-1241 11-245 (265)
255 PRK14248 phosphate ABC transpo 100.0 1.2E-41 2.6E-46 383.8 24.0 219 1005-1233 21-254 (268)
256 PRK14273 phosphate ABC transpo 100.0 1.5E-41 3.3E-46 380.2 24.6 219 375-602 6-239 (254)
257 TIGR02315 ABC_phnC phosphonate 100.0 1.2E-41 2.6E-46 379.0 23.6 211 377-599 2-233 (243)
258 TIGR00972 3a0107s01c2 phosphat 100.0 1.4E-41 3E-46 378.9 24.1 217 377-602 2-233 (247)
259 cd03226 ABC_cobalt_CbiO_domain 100.0 4.4E-42 9.4E-47 372.0 19.4 199 1007-1221 1-205 (205)
260 cd03266 ABC_NatA_sodium_export 100.0 9E-42 1.9E-46 373.5 22.0 207 1006-1224 2-218 (218)
261 PRK13633 cobalt transporter AT 100.0 1.3E-41 2.7E-46 385.4 23.9 217 1005-1232 4-234 (280)
262 PRK13632 cbiO cobalt transport 100.0 1.3E-41 2.8E-46 383.7 24.0 215 1005-1231 7-231 (271)
263 cd03218 ABC_YhbG The ABC trans 100.0 9.9E-42 2.2E-46 376.9 22.5 216 1006-1231 1-222 (232)
264 PRK14240 phosphate transporter 100.0 1.4E-41 3E-46 379.8 23.9 224 1004-1237 2-240 (250)
265 cd03259 ABC_Carb_Solutes_like 100.0 6.4E-42 1.4E-46 373.1 20.7 203 377-594 1-213 (213)
266 PRK14245 phosphate ABC transpo 100.0 9.2E-42 2E-46 381.1 22.4 221 1005-1235 3-238 (250)
267 PRK13646 cbiO cobalt transport 100.0 1.1E-41 2.4E-46 386.8 23.2 219 377-602 3-236 (286)
268 PRK14242 phosphate transporter 100.0 1.2E-41 2.6E-46 381.1 23.2 218 376-602 6-238 (253)
269 cd03268 ABC_BcrA_bacitracin_re 100.0 9.3E-42 2E-46 370.4 21.7 203 1006-1224 1-208 (208)
270 cd03250 ABCC_MRP_domain1 Domai 100.0 1.7E-41 3.7E-46 367.1 23.6 200 1006-1219 1-204 (204)
271 PRK13634 cbiO cobalt transport 100.0 1.4E-41 3.1E-46 386.3 24.1 216 377-602 3-236 (290)
272 PRK14239 phosphate transporter 100.0 1.4E-41 2.9E-46 380.5 23.5 219 1005-1233 5-238 (252)
273 PRK10070 glycine betaine trans 100.0 1.1E-41 2.5E-46 397.7 23.7 205 1022-1237 42-260 (400)
274 cd03291 ABCC_CFTR1 The CFTR su 100.0 8.3E-41 1.8E-45 375.8 29.6 241 347-610 15-256 (282)
275 TIGR03411 urea_trans_UrtD urea 100.0 1.3E-41 2.8E-46 378.3 22.8 221 1006-1231 3-231 (242)
276 cd03258 ABC_MetN_methionine_tr 100.0 1.7E-41 3.7E-46 375.1 23.6 214 377-601 2-230 (233)
277 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 5.1E-42 1.1E-46 375.4 19.2 204 1006-1220 1-218 (218)
278 PRK13651 cobalt transporter AT 100.0 1.8E-41 4E-46 386.3 24.4 216 377-602 3-255 (305)
279 PRK10744 pstB phosphate transp 100.0 2.3E-41 4.9E-46 379.8 24.7 220 374-602 11-245 (260)
280 PRK14262 phosphate ABC transpo 100.0 1.3E-41 2.9E-46 379.9 22.7 227 1005-1241 3-244 (250)
281 PRK13537 nodulation ABC transp 100.0 1.3E-41 2.8E-46 388.5 23.0 213 1005-1232 7-228 (306)
282 PRK11264 putative amino-acid A 100.0 1.8E-41 3.8E-46 379.2 23.6 218 1006-1233 4-235 (250)
283 PRK13644 cbiO cobalt transport 100.0 1.9E-41 4.1E-46 382.4 24.0 213 1006-1231 2-224 (274)
284 PRK10619 histidine/lysine/argi 100.0 2.1E-41 4.6E-46 379.6 24.1 218 1003-1233 3-243 (257)
285 PRK11231 fecE iron-dicitrate t 100.0 1.7E-41 3.7E-46 379.9 23.3 221 1006-1242 3-236 (255)
286 cd03224 ABC_TM1139_LivF_branch 100.0 1.1E-41 2.4E-46 374.0 21.3 216 377-600 1-220 (222)
287 PRK14256 phosphate ABC transpo 100.0 2.6E-41 5.6E-46 378.0 24.5 224 1003-1236 2-241 (252)
288 PRK11000 maltose/maltodextrin 100.0 1.9E-41 4.1E-46 396.1 24.1 212 376-602 3-224 (369)
289 cd03301 ABC_MalK_N The N-termi 100.0 1.1E-41 2.4E-46 371.3 20.8 203 1006-1224 1-213 (213)
290 PRK13640 cbiO cobalt transport 100.0 2.8E-41 6E-46 382.7 24.5 215 1005-1231 5-232 (282)
291 PRK11308 dppF dipeptide transp 100.0 2.8E-41 6E-46 388.2 24.8 227 1005-1241 5-254 (327)
292 PRK09493 glnQ glutamine ABC tr 100.0 2.1E-41 4.5E-46 376.0 23.0 213 1006-1232 2-226 (240)
293 cd03226 ABC_cobalt_CbiO_domain 100.0 1.3E-41 2.8E-46 368.3 20.8 199 378-591 1-205 (205)
294 PRK11124 artP arginine transpo 100.0 2.2E-41 4.9E-46 376.2 23.2 212 1006-1231 3-230 (242)
295 PRK14249 phosphate ABC transpo 100.0 3.5E-41 7.6E-46 376.6 24.8 218 1005-1232 4-236 (251)
296 PRK11614 livF leucine/isoleuci 100.0 3E-41 6.4E-46 374.1 23.9 218 1005-1231 5-226 (237)
297 PRK14243 phosphate transporter 100.0 3.7E-41 8E-46 378.5 24.9 220 1005-1234 10-251 (264)
298 TIGR03410 urea_trans_UrtE urea 100.0 1.2E-41 2.5E-46 375.6 20.4 212 1006-1230 1-220 (230)
299 PRK14261 phosphate ABC transpo 100.0 3E-41 6.4E-46 377.7 23.9 227 1005-1241 6-247 (253)
300 PRK13642 cbiO cobalt transport 100.0 4.2E-41 9.1E-46 380.5 25.4 218 376-604 4-232 (277)
301 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.1E-41 2.3E-46 373.2 19.8 205 1006-1226 1-218 (220)
302 PRK14238 phosphate transporter 100.0 3.3E-41 7.1E-46 380.1 24.4 220 1005-1234 24-258 (271)
303 cd03264 ABC_drug_resistance_li 100.0 2.2E-41 4.8E-46 368.3 22.1 203 377-594 1-211 (211)
304 TIGR02211 LolD_lipo_ex lipopro 100.0 1.9E-41 4.2E-46 371.7 21.8 205 1006-1221 2-220 (221)
305 PRK11629 lolD lipoprotein tran 100.0 3E-41 6.5E-46 372.8 23.4 209 376-595 5-228 (233)
306 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-41 3.5E-46 371.5 21.1 203 377-590 1-218 (218)
307 PRK14235 phosphate transporter 100.0 2.8E-41 6E-46 380.1 23.5 220 374-602 17-252 (267)
308 PRK14254 phosphate ABC transpo 100.0 4.2E-41 9.1E-46 381.2 25.1 220 1004-1233 38-271 (285)
309 PRK13636 cbiO cobalt transport 100.0 3.6E-41 7.7E-46 382.0 24.2 215 376-602 5-232 (283)
310 cd03250 ABCC_MRP_domain1 Domai 100.0 4.8E-41 1E-45 363.6 24.1 199 377-589 1-204 (204)
311 cd03247 ABCC_cytochrome_bd The 100.0 2E-41 4.4E-46 357.9 20.7 178 1006-1224 1-178 (178)
312 TIGR02673 FtsE cell division A 100.0 1.5E-41 3.3E-46 370.6 20.3 201 1006-1219 2-214 (214)
313 PRK11607 potG putrescine trans 100.0 4E-41 8.7E-46 392.4 25.1 214 375-603 18-241 (377)
314 TIGR02769 nickel_nikE nickel i 100.0 4E-41 8.6E-46 378.7 24.2 226 1006-1241 3-250 (265)
315 PRK11247 ssuB aliphatic sulfon 100.0 3.5E-41 7.7E-46 375.2 23.4 204 1005-1227 12-219 (257)
316 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.1E-41 6.7E-46 373.5 22.8 216 377-602 2-222 (236)
317 PRK14260 phosphate ABC transpo 100.0 3.5E-41 7.5E-46 378.1 23.5 220 1005-1234 7-246 (259)
318 cd03265 ABC_DrrA DrrA is the A 100.0 3.3E-41 7.2E-46 369.3 22.8 209 377-599 1-219 (220)
319 PRK13548 hmuV hemin importer A 100.0 5E-41 1.1E-45 376.1 24.7 212 1006-1231 3-230 (258)
320 cd03218 ABC_YhbG The ABC trans 100.0 2.1E-41 4.5E-46 374.3 21.3 216 377-601 1-222 (232)
321 PRK14266 phosphate ABC transpo 100.0 4.6E-41 9.9E-46 375.7 23.9 223 1006-1238 4-241 (250)
322 PRK13640 cbiO cobalt transport 100.0 6.4E-41 1.4E-45 379.7 25.3 216 376-602 5-233 (282)
323 PRK14267 phosphate ABC transpo 100.0 4E-41 8.7E-46 376.8 23.3 218 376-602 4-238 (253)
324 PRK13648 cbiO cobalt transport 100.0 4E-41 8.6E-46 379.6 23.4 215 1005-1231 7-231 (269)
325 PRK13632 cbiO cobalt transport 100.0 5.6E-41 1.2E-45 378.5 24.6 216 376-602 7-232 (271)
326 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.7E-41 5.9E-46 375.4 21.7 218 377-602 1-226 (242)
327 PRK14271 phosphate ABC transpo 100.0 8E-41 1.7E-45 377.4 25.8 220 1005-1234 21-254 (276)
328 TIGR03415 ABC_choXWV_ATP choli 100.0 2.5E-41 5.4E-46 391.9 22.1 210 1021-1241 37-264 (382)
329 PRK13638 cbiO cobalt transport 100.0 3.7E-41 8E-46 380.3 23.0 212 1006-1231 2-225 (271)
330 PRK14270 phosphate ABC transpo 100.0 5.4E-41 1.2E-45 375.1 24.1 218 1005-1232 4-236 (251)
331 PRK10895 lipopolysaccharide AB 100.0 4.1E-41 8.9E-46 373.9 22.9 217 1005-1231 3-226 (241)
332 PRK13641 cbiO cobalt transport 100.0 5.1E-41 1.1E-45 381.5 24.1 215 1006-1231 3-234 (287)
333 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.9E-41 6.4E-46 380.1 21.9 212 378-602 26-251 (269)
334 cd03300 ABC_PotA_N PotA is an 100.0 2.8E-41 6.1E-46 372.6 21.3 211 1006-1232 1-221 (232)
335 cd03266 ABC_NatA_sodium_export 100.0 4.8E-41 1E-45 367.8 22.9 206 377-594 2-218 (218)
336 cd03268 ABC_BcrA_bacitracin_re 100.0 4.1E-41 8.8E-46 365.4 22.1 203 377-594 1-208 (208)
337 cd03225 ABC_cobalt_CbiO_domain 100.0 2.1E-41 4.4E-46 368.7 19.8 201 1007-1219 1-211 (211)
338 PRK13633 cobalt transporter AT 100.0 5.6E-41 1.2E-45 380.1 24.0 216 376-602 4-234 (280)
339 PRK14247 phosphate ABC transpo 100.0 5.6E-41 1.2E-45 374.9 23.8 218 376-602 3-235 (250)
340 cd03292 ABC_FtsE_transporter F 100.0 2.8E-41 6.1E-46 368.6 20.9 202 1006-1220 1-214 (214)
341 PRK13645 cbiO cobalt transport 100.0 5E-41 1.1E-45 382.6 23.8 221 1003-1231 4-240 (289)
342 PRK10253 iron-enterobactin tra 100.0 5.1E-41 1.1E-45 377.8 23.4 214 1004-1231 6-233 (265)
343 PRK11022 dppD dipeptide transp 100.0 5E-41 1.1E-45 386.4 23.9 228 1006-1241 4-253 (326)
344 cd03235 ABC_Metallic_Cations A 100.0 1.9E-41 4.2E-46 369.4 19.3 198 1007-1224 1-213 (213)
345 PRK13649 cbiO cobalt transport 100.0 4.9E-41 1.1E-45 381.3 23.4 219 1006-1231 3-234 (280)
346 PRK13648 cbiO cobalt transport 100.0 8.1E-41 1.7E-45 377.0 25.0 216 376-602 7-232 (269)
347 PRK13537 nodulation ABC transp 100.0 3.5E-41 7.5E-46 385.1 22.1 214 375-602 6-228 (306)
348 PRK09473 oppD oligopeptide tra 100.0 3.9E-41 8.5E-46 387.5 22.7 229 1005-1241 12-261 (330)
349 PRK10575 iron-hydroxamate tran 100.0 5.2E-41 1.1E-45 377.7 23.2 213 376-601 11-237 (265)
350 PRK14253 phosphate ABC transpo 100.0 6.5E-41 1.4E-45 374.2 23.7 219 1005-1233 3-235 (249)
351 TIGR01288 nodI ATP-binding ABC 100.0 4.8E-41 1E-45 384.8 23.1 213 1005-1232 4-225 (303)
352 PRK13652 cbiO cobalt transport 100.0 8.3E-41 1.8E-45 378.1 24.7 214 377-602 4-228 (277)
353 PRK13644 cbiO cobalt transport 100.0 1E-40 2.2E-45 376.4 25.3 214 377-602 2-225 (274)
354 TIGR00968 3a0106s01 sulfate AB 100.0 8.5E-41 1.8E-45 369.8 24.0 211 1006-1232 1-221 (237)
355 PRK14241 phosphate transporter 100.0 6.4E-41 1.4E-45 375.9 23.3 218 1005-1232 4-243 (258)
356 PRK14274 phosphate ABC transpo 100.0 8.4E-41 1.8E-45 375.2 24.2 218 376-602 12-244 (259)
357 PRK14275 phosphate ABC transpo 100.0 7.3E-41 1.6E-45 379.7 23.9 225 1005-1239 39-278 (286)
358 PRK14252 phosphate ABC transpo 100.0 8.5E-41 1.9E-45 376.2 24.3 221 1003-1233 14-251 (265)
359 PRK15079 oligopeptide ABC tran 100.0 8.6E-41 1.9E-45 384.3 24.7 223 376-608 8-259 (331)
360 TIGR03873 F420-0_ABC_ATP propo 100.0 6.5E-41 1.4E-45 375.4 23.0 212 1006-1231 2-226 (256)
361 cd03290 ABCC_SUR1_N The SUR do 100.0 9.9E-41 2.1E-45 365.0 23.8 210 1007-1219 2-218 (218)
362 PRK14240 phosphate transporter 100.0 1.1E-40 2.3E-45 372.7 24.5 219 375-602 2-235 (250)
363 cd03301 ABC_MalK_N The N-termi 100.0 5.6E-41 1.2E-45 365.8 21.6 203 377-594 1-213 (213)
364 cd03247 ABCC_cytochrome_bd The 100.0 6.4E-41 1.4E-45 354.1 21.3 178 377-594 1-178 (178)
365 TIGR02211 LolD_lipo_ex lipopro 100.0 7.9E-41 1.7E-45 366.8 22.9 208 377-591 2-220 (221)
366 TIGR03005 ectoine_ehuA ectoine 100.0 7.1E-41 1.5E-45 374.4 22.9 213 377-602 1-237 (252)
367 PRK14263 phosphate ABC transpo 100.0 9.8E-41 2.1E-45 373.9 24.0 224 1005-1238 8-252 (261)
368 PRK11300 livG leucine/isoleuci 100.0 9E-41 2E-45 374.6 23.8 220 1005-1231 5-243 (255)
369 PRK11831 putative ABC transpor 100.0 9E-41 1.9E-45 376.4 23.8 214 376-602 7-234 (269)
370 PRK13639 cbiO cobalt transport 100.0 5.6E-41 1.2E-45 379.1 22.0 213 1006-1231 2-226 (275)
371 PRK09493 glnQ glutamine ABC tr 100.0 7.6E-41 1.7E-45 371.5 22.7 217 377-602 2-226 (240)
372 PRK11231 fecE iron-dicitrate t 100.0 8.7E-41 1.9E-45 374.2 23.3 220 377-610 3-235 (255)
373 PRK10908 cell division protein 100.0 7.8E-41 1.7E-45 366.9 22.4 204 1006-1222 2-217 (222)
374 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.5E-41 1.2E-45 367.6 21.1 204 377-596 1-218 (220)
375 cd03225 ABC_cobalt_CbiO_domain 100.0 6.1E-41 1.3E-45 365.0 21.3 201 378-589 1-211 (211)
376 PRK11247 ssuB aliphatic sulfon 100.0 1.3E-40 2.8E-45 370.7 24.4 204 376-597 12-219 (257)
377 TIGR03522 GldA_ABC_ATP gliding 100.0 7.1E-41 1.5E-45 382.6 22.8 212 1006-1232 3-222 (301)
378 PRK14272 phosphate ABC transpo 100.0 9E-41 2E-45 373.9 23.2 225 1005-1239 4-244 (252)
379 PRK14258 phosphate ABC transpo 100.0 9.6E-41 2.1E-45 374.7 23.5 222 1004-1235 6-249 (261)
380 PRK10584 putative ABC transpor 100.0 9.3E-41 2E-45 368.0 22.9 208 1005-1223 6-227 (228)
381 PRK14259 phosphate ABC transpo 100.0 1.2E-40 2.6E-45 375.2 24.2 219 375-602 12-254 (269)
382 PRK14248 phosphate ABC transpo 100.0 1E-40 2.2E-45 376.2 23.7 218 376-602 21-253 (268)
383 PRK14237 phosphate transporter 100.0 1.4E-40 3.1E-45 374.4 24.7 220 374-602 18-252 (267)
384 TIGR02769 nickel_nikE nickel i 100.0 7.5E-41 1.6E-45 376.4 22.4 222 377-609 3-249 (265)
385 PRK10771 thiQ thiamine transpo 100.0 1.5E-40 3.2E-45 367.0 24.3 209 1006-1232 2-220 (232)
386 cd03298 ABC_ThiQ_thiamine_tran 100.0 9.8E-41 2.1E-45 363.3 22.5 201 1006-1224 1-211 (211)
387 TIGR03410 urea_trans_UrtE urea 100.0 4.5E-41 9.8E-46 371.0 20.1 211 377-599 1-219 (230)
388 PRK14236 phosphate transporter 100.0 1.2E-40 2.6E-45 376.0 23.9 219 375-602 24-257 (272)
389 PRK10070 glycine betaine trans 100.0 8.1E-41 1.8E-45 390.5 23.3 200 393-603 43-256 (400)
390 PRK11124 artP arginine transpo 100.0 1.4E-40 3E-45 369.9 24.1 216 377-601 3-230 (242)
391 TIGR03411 urea_trans_UrtD urea 100.0 1E-40 2.3E-45 371.0 23.1 221 377-601 3-231 (242)
392 COG4175 ProV ABC-type proline/ 100.0 4.7E-41 1E-45 357.5 19.2 221 376-607 4-261 (386)
393 PRK13638 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 376.1 23.9 213 377-602 2-226 (271)
394 PRK14239 phosphate transporter 100.0 1.2E-40 2.5E-45 373.0 23.2 218 376-602 5-237 (252)
395 cd03269 ABC_putative_ATPase Th 100.0 6.7E-41 1.5E-45 364.3 20.5 201 1006-1224 1-210 (210)
396 PRK15112 antimicrobial peptide 100.0 1.6E-40 3.6E-45 373.9 24.4 229 1005-1244 4-253 (267)
397 PRK11614 livF leucine/isoleuci 100.0 1.9E-40 4.1E-45 367.6 24.4 218 376-601 5-226 (237)
398 PRK10247 putative ABC transpor 100.0 1.3E-40 2.7E-45 365.5 22.6 209 376-597 7-223 (225)
399 PRK11264 putative amino-acid A 100.0 2.1E-40 4.5E-45 370.5 24.7 217 377-602 4-234 (250)
400 PRK14251 phosphate ABC transpo 100.0 1E-40 2.3E-45 373.0 22.3 218 376-602 4-236 (251)
401 PRK14245 phosphate ABC transpo 100.0 9.6E-41 2.1E-45 372.9 22.0 218 376-602 3-235 (250)
402 PRK14255 phosphate ABC transpo 100.0 1.4E-40 3E-45 372.3 23.2 221 1005-1235 5-240 (252)
403 PRK13536 nodulation factor exp 100.0 9.1E-41 2E-45 385.1 22.4 213 1005-1232 41-262 (340)
404 PRK14265 phosphate ABC transpo 100.0 3.3E-40 7.1E-45 372.3 26.4 220 1005-1234 20-261 (274)
405 PRK13645 cbiO cobalt transport 100.0 1.8E-40 3.9E-45 378.0 24.5 223 374-602 4-241 (289)
406 PRK10895 lipopolysaccharide AB 100.0 1E-40 2.2E-45 370.7 22.0 216 377-601 4-226 (241)
407 PRK13641 cbiO cobalt transport 100.0 2E-40 4.3E-45 376.7 24.7 220 376-602 2-235 (287)
408 cd03257 ABC_NikE_OppD_transpor 100.0 1.1E-40 2.4E-45 367.8 21.9 211 377-594 2-228 (228)
409 PRK13649 cbiO cobalt transport 100.0 1.9E-40 4.1E-45 376.5 24.5 219 377-602 3-235 (280)
410 PRK00349 uvrA excinuclease ABC 100.0 9.2E-40 2E-44 413.0 33.3 104 1133-1236 818-932 (943)
411 PRK13548 hmuV hemin importer A 100.0 2.7E-40 5.8E-45 370.2 25.2 212 377-601 3-230 (258)
412 PRK14268 phosphate ABC transpo 100.0 1.2E-40 2.5E-45 373.6 22.3 218 376-602 12-243 (258)
413 PRK14243 phosphate transporter 100.0 2E-40 4.2E-45 372.6 24.1 218 376-602 10-249 (264)
414 PRK15093 antimicrobial peptide 100.0 1.8E-40 3.9E-45 383.2 24.4 228 1006-1241 4-258 (330)
415 TIGR01288 nodI ATP-binding ABC 100.0 1.6E-40 3.4E-45 380.5 23.6 217 376-602 4-225 (303)
416 cd03257 ABC_NikE_OppD_transpor 100.0 1.9E-40 4E-45 365.9 23.4 212 1006-1224 2-228 (228)
417 PRK10247 putative ABC transpor 100.0 1.2E-40 2.5E-45 365.7 21.7 210 1005-1227 7-223 (225)
418 TIGR02673 FtsE cell division A 100.0 1.1E-40 2.4E-45 363.8 21.4 201 377-589 2-214 (214)
419 cd03262 ABC_HisP_GlnQ_permease 100.0 7.1E-41 1.5E-45 365.1 19.8 201 1006-1220 1-213 (213)
420 PRK11701 phnK phosphonate C-P 100.0 4.7E-40 1E-44 368.9 26.9 227 1005-1241 6-251 (258)
421 cd03246 ABCC_Protease_Secretio 100.0 1.2E-40 2.6E-45 350.2 20.6 172 1006-1220 1-173 (173)
422 cd03292 ABC_FtsE_transporter F 100.0 1.4E-40 3.1E-45 363.0 22.0 202 377-590 1-214 (214)
423 PRK14246 phosphate ABC transpo 100.0 1.7E-40 3.6E-45 371.1 23.0 227 1005-1241 10-251 (257)
424 PRK11144 modC molybdate transp 100.0 1.5E-40 3.3E-45 386.8 23.6 212 1006-1234 2-221 (352)
425 PRK14249 phosphate ABC transpo 100.0 2E-40 4.3E-45 370.6 23.6 218 376-602 4-236 (251)
426 TIGR03415 ABC_choXWV_ATP choli 100.0 1.4E-40 3E-45 385.7 23.0 206 392-608 38-262 (382)
427 PRK10619 histidine/lysine/argi 100.0 1.9E-40 4.2E-45 371.9 23.4 215 375-602 4-242 (257)
428 PRK09984 phosphonate/organopho 100.0 2.7E-40 5.9E-45 371.7 24.6 224 1005-1245 4-253 (262)
429 cd03235 ABC_Metallic_Cations A 100.0 8.3E-41 1.8E-45 364.4 19.6 198 378-594 1-213 (213)
430 cd03246 ABCC_Protease_Secretio 100.0 1.9E-40 4E-45 348.7 21.4 172 377-590 1-173 (173)
431 PRK14244 phosphate ABC transpo 100.0 1E-40 2.3E-45 372.8 20.7 217 377-602 6-238 (251)
432 PRK14256 phosphate ABC transpo 100.0 2.4E-40 5.2E-45 370.1 23.6 219 375-602 3-237 (252)
433 cd03290 ABCC_SUR1_N The SUR do 100.0 3.4E-40 7.4E-45 360.8 24.2 210 378-589 2-218 (218)
434 PRK10253 iron-enterobactin tra 100.0 2.3E-40 5E-45 372.5 23.5 214 375-601 6-233 (265)
435 PRK14238 phosphate transporter 100.0 2.2E-40 4.8E-45 373.4 23.4 218 376-602 24-256 (271)
436 PRK13547 hmuV hemin importer A 100.0 2.8E-40 6.1E-45 371.1 23.7 212 1006-1231 2-244 (272)
437 PRK14261 phosphate ABC transpo 100.0 3.1E-40 6.8E-45 369.4 24.0 218 376-602 6-238 (253)
438 PRK13536 nodulation factor exp 100.0 1.7E-40 3.6E-45 382.9 22.4 217 376-602 41-262 (340)
439 PRK14264 phosphate ABC transpo 100.0 3.3E-40 7.1E-45 377.6 24.6 219 1004-1232 44-290 (305)
440 PRK14253 phosphate ABC transpo 100.0 3.2E-40 6.8E-45 368.7 23.9 217 376-601 3-233 (249)
441 PRK11308 dppF dipeptide transp 100.0 3.5E-40 7.7E-45 379.1 24.9 223 376-608 5-252 (327)
442 PRK10584 putative ABC transpor 100.0 3.6E-40 7.8E-45 363.3 24.0 207 376-593 6-227 (228)
443 cd03299 ABC_ModC_like Archeal 100.0 2.8E-40 6.1E-45 365.2 23.1 210 1006-1232 1-220 (235)
444 COG4555 NatA ABC-type Na+ tran 100.0 3.5E-41 7.5E-46 337.2 14.2 213 377-602 2-223 (245)
445 PRK14270 phosphate ABC transpo 100.0 3.1E-40 6.6E-45 369.1 23.3 218 376-602 4-236 (251)
446 TIGR03522 GldA_ABC_ATP gliding 100.0 2.5E-40 5.4E-45 378.2 23.0 216 377-602 3-222 (301)
447 PRK09473 oppD oligopeptide tra 100.0 1.8E-40 3.9E-45 381.9 22.0 225 376-608 12-259 (330)
448 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.9E-40 8.3E-45 358.6 23.4 201 377-594 1-211 (211)
449 PRK14262 phosphate ABC transpo 100.0 3.3E-40 7.2E-45 368.7 23.3 218 376-602 3-235 (250)
450 PRK14271 phosphate ABC transpo 100.0 6.1E-40 1.3E-44 370.2 25.5 218 376-602 21-252 (276)
451 PRK11022 dppD dipeptide transp 100.0 4.2E-40 9.1E-45 378.7 24.6 224 377-608 4-251 (326)
452 TIGR03873 F420-0_ABC_ATP propo 100.0 3.5E-40 7.5E-45 369.5 23.2 212 377-601 2-226 (256)
453 TIGR01188 drrA daunorubicin re 100.0 1.6E-40 3.4E-45 380.4 20.7 200 1021-1232 6-214 (302)
454 TIGR01978 sufC FeS assembly AT 100.0 2.3E-40 4.9E-45 368.8 21.4 213 1006-1231 1-234 (243)
455 PRK10908 cell division protein 100.0 4.7E-40 1E-44 360.7 23.5 204 377-592 2-217 (222)
456 TIGR01277 thiQ thiamine ABC tr 100.0 4.2E-40 9.1E-45 358.5 22.9 202 1006-1225 1-212 (213)
457 PRK13639 cbiO cobalt transport 100.0 3.2E-40 7E-45 372.9 22.8 214 377-602 2-227 (275)
458 PRK14260 phosphate ABC transpo 100.0 3.3E-40 7.2E-45 370.1 22.7 219 375-602 6-244 (259)
459 PRK11300 livG leucine/isoleuci 100.0 4.2E-40 9.1E-45 369.2 23.5 222 376-601 5-243 (255)
460 COG0410 LivF ABC-type branched 100.0 4.1E-40 8.9E-45 340.7 21.3 221 376-603 3-228 (237)
461 cd03262 ABC_HisP_GlnQ_permease 100.0 2.6E-40 5.6E-45 360.7 20.9 205 377-590 1-213 (213)
462 PRK10418 nikD nickel transport 100.0 5.5E-40 1.2E-44 367.3 24.1 228 1005-1246 4-246 (254)
463 PRK10771 thiQ thiamine transpo 100.0 7.6E-40 1.7E-44 361.4 24.7 210 377-603 2-221 (232)
464 PRK11144 modC molybdate transp 100.0 3.7E-40 8.1E-45 383.6 23.4 211 377-603 2-220 (352)
465 PRK09984 phosphonate/organopho 100.0 8.3E-40 1.8E-44 367.8 25.1 222 376-612 4-251 (262)
466 PRK15112 antimicrobial peptide 100.0 8E-40 1.7E-44 368.3 24.9 225 376-611 4-251 (267)
467 cd03234 ABCG_White The White s 100.0 2.7E-40 5.7E-45 363.5 20.4 214 1006-1224 4-226 (226)
468 cd03300 ABC_PotA_N PotA is an 100.0 3.3E-40 7.3E-45 364.1 21.2 211 377-602 1-221 (232)
469 cd03269 ABC_putative_ATPase Th 100.0 3.4E-40 7.4E-45 358.7 20.7 205 377-594 1-210 (210)
470 PRK14241 phosphate transporter 100.0 5E-40 1.1E-44 368.7 22.6 218 376-602 4-243 (258)
471 TIGR00968 3a0106s01 sulfate AB 100.0 7.3E-40 1.6E-44 362.4 23.5 211 377-602 1-221 (237)
472 PRK14254 phosphate ABC transpo 100.0 8.6E-40 1.9E-44 370.4 24.6 219 375-602 38-270 (285)
473 COG0410 LivF ABC-type branched 100.0 9.4E-40 2E-44 338.0 22.5 220 1005-1232 3-227 (237)
474 PRK14275 phosphate ABC transpo 100.0 6.1E-40 1.3E-44 372.2 22.9 219 375-602 38-271 (286)
475 PRK11248 tauB taurine transpor 100.0 4.8E-40 1E-44 367.0 21.4 202 1006-1226 2-215 (255)
476 PRK13547 hmuV hemin importer A 100.0 1E-39 2.3E-44 366.6 24.0 216 377-601 2-244 (272)
477 TIGR01978 sufC FeS assembly AT 100.0 6.5E-40 1.4E-44 365.1 22.0 210 377-599 1-232 (243)
478 PRK14252 phosphate ABC transpo 100.0 8.8E-40 1.9E-44 368.0 23.2 220 374-602 14-250 (265)
479 PRK15093 antimicrobial peptide 100.0 1.1E-39 2.4E-44 376.7 24.5 224 377-608 4-256 (330)
480 PRK10419 nikE nickel transport 100.0 1E-39 2.2E-44 367.5 23.4 232 1006-1242 4-251 (268)
481 TIGR02142 modC_ABC molybdenum 100.0 6.7E-40 1.5E-44 382.2 22.8 212 1010-1237 4-227 (354)
482 COG1131 CcmA ABC-type multidru 100.0 9.1E-40 2E-44 369.5 23.0 214 376-602 4-227 (293)
483 PRK14272 phosphate ABC transpo 100.0 7.4E-40 1.6E-44 366.5 22.1 218 376-602 4-237 (252)
484 COG4555 NatA ABC-type Na+ tran 100.0 2.1E-40 4.6E-45 331.6 15.4 213 1006-1232 2-223 (245)
485 COG1131 CcmA ABC-type multidru 100.0 6.4E-40 1.4E-44 370.7 21.4 214 1005-1232 4-227 (293)
486 PRK14265 phosphate ABC transpo 100.0 2E-39 4.4E-44 365.9 25.4 218 376-602 20-259 (274)
487 PRK14266 phosphate ABC transpo 100.0 1.3E-39 2.9E-44 363.8 23.7 218 376-602 3-235 (250)
488 PRK14258 phosphate ABC transpo 100.0 1.3E-39 2.9E-44 365.5 23.4 219 375-602 6-246 (261)
489 PRK11701 phnK phosphonate C-P 100.0 1.5E-39 3.2E-44 365.0 23.7 218 376-602 6-242 (258)
490 TIGR01277 thiQ thiamine ABC tr 100.0 1.7E-39 3.6E-44 353.8 23.5 202 377-595 1-212 (213)
491 PRK14263 phosphate ABC transpo 100.0 1.3E-39 2.9E-44 364.7 23.2 218 376-602 8-246 (261)
492 TIGR01188 drrA daunorubicin re 100.0 8.7E-40 1.9E-44 374.2 21.9 204 385-602 2-214 (302)
493 COG4175 ProV ABC-type proline/ 100.0 4.8E-40 1E-44 349.8 17.7 224 1005-1239 4-262 (386)
494 PRK14246 phosphate ABC transpo 100.0 1.6E-39 3.4E-44 363.2 22.8 218 376-602 10-242 (257)
495 TIGR02982 heterocyst_DevA ABC 100.0 1.2E-39 2.6E-44 356.9 21.3 204 1006-1220 2-219 (220)
496 PRK14255 phosphate ABC transpo 100.0 1.4E-39 3E-44 364.1 22.3 218 376-602 5-237 (252)
497 TIGR03740 galliderm_ABC gallid 100.0 1.3E-39 2.9E-44 357.4 21.3 205 1006-1228 1-210 (223)
498 TIGR02323 CP_lyasePhnK phospho 100.0 2.7E-39 5.8E-44 362.1 23.8 227 1005-1241 3-248 (253)
499 cd03233 ABC_PDR_domain1 The pl 100.0 1.7E-39 3.6E-44 350.0 21.1 191 1005-1224 3-202 (202)
500 PRK14264 phosphate ABC transpo 100.0 2E-39 4.3E-44 371.1 23.0 218 376-602 45-290 (305)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.1e-223 Score=2033.56 Aligned_cols=1206 Identities=52% Similarity=0.846 Sum_probs=1116.7
Q ss_pred chHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 000851 34 SGSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAW 113 (1253)
Q Consensus 34 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1253)
..++.++|+|..++++.+++++.+++++.++.+|++.+++|+++|.+..... . ...+.+..+++.+++++++.++..|
T Consensus 12 ~~~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~-~-~~~~~~~~~~l~~~~lg~~~~~~~~ 89 (1228)
T KOG0055|consen 12 TVSFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTN-K-IASSEVSKVALYFVYLGVGVFISGF 89 (1228)
T ss_pred ccchHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccc-h-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6678999999999999999999999999999999999999999998765431 1 2224567788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 114 IGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFT 193 (1253)
Q Consensus 114 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1253)
++..||.+.++|+..++|.++++.+++++++|||.+ .+|++.+++++|++.|+++++++++.+++.+.++++++++.|+
T Consensus 90 ~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~ 168 (1228)
T KOG0055|consen 90 IQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFY 168 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999984 7799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000851 194 SVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGK 273 (1253)
Q Consensus 194 ~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~ 273 (1253)
..|+|+++++.+.|++++....+.+.+.+...+.+++++++.++++|+++++|||.+|+.|+.+.++|.+.++...+...
T Consensus 169 ~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi 248 (1228)
T KOG0055|consen 169 YGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGI 248 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 274 KSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISII 353 (1253)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l 353 (1253)
+...+.++..++..++.+..+++.+|||+.++.++..++|++++++++++.....+++..|.+..+.+|++|+.+|++.+
T Consensus 249 ~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i 328 (1228)
T KOG0055|consen 249 KKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETI 328 (1228)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred hccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCc-ccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCC
Q 000851 354 KENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHM-VFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS 432 (1253)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~-~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 432 (1253)
+..|.++ +....+......+|.|+|+||+|+||++|+. +|+|+||+|++|+++||||||||||||++++|.|||+|++
T Consensus 329 ~~~~~i~-~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~ 407 (1228)
T KOG0055|consen 329 DRKPSID-PYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTS 407 (1228)
T ss_pred cCCCCCC-cccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 9988776 3222333445578999999999999998754 9999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCC
Q 000851 433 GKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGG 512 (1253)
Q Consensus 433 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g 512 (1253)
|+|++||.|+++++.+|+|++||+|+|||.||++||+|||+||+|+++.+++.+||+++++++||..||+||||.+||+|
T Consensus 408 G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g 487 (1228)
T KOG0055|consen 408 GEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERG 487 (1228)
T ss_pred ceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000851 513 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVE 592 (1253)
Q Consensus 513 ~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~ 592 (1253)
.+|||||||||||||||++||+||||||||||||+++|+.++++|++.++|||+|+|||||+|+++||+|+||++|+|+|
T Consensus 488 ~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE 567 (1228)
T KOG0055|consen 488 VQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVE 567 (1228)
T ss_pred CCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCcchhhhcCchHHHHHHhhhcccCCCC--Cc----ccCCCCCCCCCCCCCCCCcccchhhh---hhhhhhhccccCCC
Q 000851 593 SGTHVDLISKGGEYAALVNLQSSEHLSNP--SS----ICYSGSSRYSSFRDFPSSRRYDVEFE---SSKRRELQSSDQSF 663 (1253)
Q Consensus 593 ~g~~~~l~~~~~~y~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 663 (1253)
.|+|+||++.+|.|.+|++.|......+. .. .....+...+. ......+....... ..+.++.+......
T Consensus 568 ~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~-~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 646 (1228)
T KOG0055|consen 568 QGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSS-SSPSLSRGSNRSNLLSVKPEGEDPEEPVSEE 646 (1228)
T ss_pred ecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhcccccc-ccccccCCccccccccccccccccccccccc
Confidence 99999999999999999999865443221 00 00000000000 00000000000000 00000000000111
Q ss_pred CCcchHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000851 664 APSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLL 743 (1253)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 743 (1253)
....++++++++++|+|++++++++++++.|+..|++++.+++++..+..++++........|+++|+++++...+..++
T Consensus 647 ~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~ 726 (1228)
T KOG0055|consen 647 DEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFL 726 (1228)
T ss_pred cccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 25568999999999999999999999999999999999999999999987766666655556999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 744 QHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFI 823 (1253)
Q Consensus 744 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~ 823 (1253)
++|++.+++++++.++|..+|+++++++++|||.++|+ |.|.+|+.+|...++..++..+..+++++..++++++++|+
T Consensus 727 q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~ 805 (1228)
T KOG0055|consen 727 QHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFI 805 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHH
Q 000851 824 LSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQAL 903 (1253)
Q Consensus 824 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~ 903 (1253)
++|++++++++..|++++..+...+++.++..+..+.+.++++.+.|++++++||++|+.|+++.+.|.+.++...+...
T Consensus 806 ~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~ 885 (1228)
T KOG0055|consen 806 YGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSF 885 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 904 LRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGIL 983 (1253)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~ 983 (1253)
+++.++++.+++++++.++.+++++|||.+++..+.+++.+++.+++.+.+.+..+++...+.|++.++..|++++++++
T Consensus 886 ~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~ 965 (1228)
T KOG0055|consen 886 KRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEIL 965 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCcc
Q 000851 984 YRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISG 1063 (1253)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G 1063 (1253)
++++..+++.+.+...++.+|+|+|+||+|+||+||+.+||+|+||+|++||++||||||||||||++.||.|||||++|
T Consensus 966 dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G 1045 (1228)
T KOG0055|consen 966 DRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAG 1045 (1228)
T ss_pred cCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 99987776654444456788999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCC
Q 000851 1064 TVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGV 1143 (1253)
Q Consensus 1064 ~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~ 1143 (1253)
.|.|||+||+++++++||++||+|+|||.||++||||||.||.++++++||.+|+|.|++|+||.+||+||||.|||+|.
T Consensus 1046 ~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~ 1125 (1228)
T KOG0055|consen 1046 KVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGV 1125 (1228)
T ss_pred eEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccC
Confidence 99999999999999999999999999999999999999999966689999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEe
Q 000851 1144 QLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEI 1223 (1253)
Q Consensus 1144 ~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~ 1223 (1253)
+||||||||||||||++|||+||||||||||||.++|+.||++|++...|||+|+|||||+||++||.|+|+++|+|+|+
T Consensus 1126 QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~ 1205 (1228)
T KOG0055|consen 1126 QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQ 1205 (1228)
T ss_pred cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHhhcccchHHHHHHHhhc
Q 000851 1224 GSHEQLLRKENGIYKQLIRLQQD 1246 (1253)
Q Consensus 1224 Gt~~eLl~~~~g~y~~L~~~~~~ 1246 (1253)
|||+||++ ++|.|++|++.|..
T Consensus 1206 GtH~~L~~-~~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1206 GTHDELLA-KRGIYFRLVQLQSS 1227 (1228)
T ss_pred ccHHHHHh-CCCchHHHhhhccC
Confidence 99999999 79999999998853
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7.6e-178 Score=1759.83 Aligned_cols=1198 Identities=31% Similarity=0.523 Sum_probs=1024.0
Q ss_pred cchHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q 000851 33 QSGSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSA 112 (1253)
Q Consensus 33 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1253)
++.++.++|+|..+.++.+++++++++++.+++.|++|+++++++|.+... ..+..+++++++++++.+++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~--------~~~~~~~~~~~~~~i~~~~~~ 114 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLG--------ENVNDIIFSLVLIGIFQFILS 114 (1466)
T ss_pred ccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------chHHHHHHHHHHHHHHHHHHH
Confidence 455799999999888888889999999999999999999999999976321 112233455667777788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 113 WIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGF 192 (1253)
Q Consensus 113 ~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1253)
+++.+++.++++++..++|.++|++++++|++|||. .++|++++++++|++.+++.++..+..++..++.++++++++|
T Consensus 115 ~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~-~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~ 193 (1466)
T PTZ00265 115 FISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDN-NPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSL 193 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 5889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000851 193 TSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQG 272 (1253)
Q Consensus 193 ~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~ 272 (1253)
+++|+|++++++++|+++++..++.+++++..++.++..+++++.++|.++|+++||+|+.|+.+.++|++..+.+.+..
T Consensus 194 ~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~ 273 (1466)
T PTZ00265 194 FKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYI 273 (1466)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999889999998999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 273 KKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHG--------DTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKA 344 (1253)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g--------~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 344 (1253)
.+.....++..++..++.++++++++|+|++++.+| .+++|++++++++.+.....+..+.+.+..++++.+
T Consensus 274 ~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~ 353 (1466)
T PTZ00265 274 LKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLE 353 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999889999988999999999999999986 588999998877777766777888889999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHH
Q 000851 345 AAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISM 423 (1253)
Q Consensus 345 a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~l 423 (1253)
|++||+++++.+++.+ . ...+...+.. +.|+|+||+|+|++++ .++|+|+||+|++||++|||||||||||||+++
T Consensus 354 a~~ri~~ii~~~~~~~-~-~~~~~~~~~~-~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~l 430 (1466)
T PTZ00265 354 ATNSLYEIINRKPLVE-N-NDDGKKLKDI-KKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKL 430 (1466)
T ss_pred HHHHHHHHHcCCCCCC-C-CCCCccCCCC-CcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 9999999999877643 1 1111222222 4799999999998654 359999999999999999999999999999999
Q ss_pred HHccCCCCCcEEEE-CCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCC-------------------------
Q 000851 424 VQRLYEPTSGKILL-DGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKE------------------------- 477 (1253)
Q Consensus 424 l~~~~~~~~G~i~~-~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~------------------------- 477 (1253)
|+|+|+|++|+|++ ||+|+++++.+++|++||||+|+|.||++||+|||.+|.+
T Consensus 431 L~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (1466)
T PTZ00265 431 IERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNK 510 (1466)
T ss_pred HHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccc
Confidence 99999999999999 5799999999999999999999999999999999999742
Q ss_pred --------------------------------CCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 000851 478 --------------------------------DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 525 (1253)
Q Consensus 478 --------------------------------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriai 525 (1253)
+.++++++++|+.+++++|+.++|+||||.+|++|.+|||||||||+|
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaI 590 (1466)
T PTZ00265 511 RNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISI 590 (1466)
T ss_pred cccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHH
Confidence 245688999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhhcCEEEEEeCC---------------
Q 000851 526 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNG--------------- 588 (1253)
Q Consensus 526 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G--------------- 588 (1253)
||||+++|+|||||||||+||+++++.+++.|+++. +|+|+|+||||+++++.||+|++|++|
T Consensus 591 ARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~ 670 (1466)
T PTZ00265 591 ARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDP 670 (1466)
T ss_pred HHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccc
Confidence 999999999999999999999999999999999986 489999999999999999999999986
Q ss_pred --------------------------------EEEEeeCcchhhh-cCchHHHHHHhhhcccCCC--C--C--cc--cCC
Q 000851 589 --------------------------------QVVESGTHVDLIS-KGGEYAALVNLQSSEHLSN--P--S--SI--CYS 627 (1253)
Q Consensus 589 --------------------------------~i~~~g~~~~l~~-~~~~y~~~~~~~~~~~~~~--~--~--~~--~~~ 627 (1253)
+|+|+|+|+||++ ++|.|+.++..|....... . . .. ...
T Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~ 750 (1466)
T PTZ00265 671 TKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSA 750 (1466)
T ss_pred cccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccccccc
Confidence 5999999999998 6999999998775432111 0 0 00 000
Q ss_pred CCCCCCCC--CCCC----CC-c--c--cchhhhhhhhhhhccc-c---------CCCCCcchHHHHHHHhhchhHHHHHH
Q 000851 628 GSSRYSSF--RDFP----SS-R--R--YDVEFESSKRRELQSS-D---------QSFAPSPSIWELLKLNAAEWPYAVLG 686 (1253)
Q Consensus 628 ~~~~~~~~--~~~~----~~-~--~--~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (1253)
........ .... .. . . ...........+.... . ........+.++++..+++++.++++
T Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (1466)
T PTZ00265 751 YKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVTII 830 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 00000000 0000 00 0 0 0000000000000000 0 00011113445566666666778888
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 687 SVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSA 766 (1253)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ 766 (1253)
++++++.+...|+++++++.++..++... ........|.+++++++++..++.+++.|+..++++++..++|.++|++
T Consensus 831 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ 908 (1466)
T PTZ00265 831 ALSILVAGGLYPVFALLYAKYVSTLFDFA--NLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFEN 908 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999998776431 2223345677888888888899999999999999999999999999999
Q ss_pred HHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000851 767 ILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAE 846 (1253)
Q Consensus 767 ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~ 846 (1253)
++++|++|||.+++++|++++|+++|++.++..+...+..++..++.++++++++++++|.+++++++++|++...+...
T Consensus 909 ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~ 988 (1466)
T PTZ00265 909 ILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIR 988 (1466)
T ss_pred HHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998789999999999999999999999999999999999999999999999999888765555443332222
Q ss_pred HHHHhhHH--HH-------------HHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000851 847 QLFLKGFG--GD-------------YNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGF 911 (1253)
Q Consensus 847 ~~~~~~~~--~~-------------~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1253)
.+...... +. .++...+....+.|+++|+++||+|+.|+++.++|.+..+...+...+...+.++
T Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1466)
T PTZ00265 989 ARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSM 1068 (1466)
T ss_pred HHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111100 00 1233566788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 000851 912 GYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQP 991 (1253)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 991 (1253)
.+++.+++.++..++++|+|++++..|.+++|++++++.+..+...++..+...++++.++..+.+|++++++.+++.+.
T Consensus 1069 ~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~ 1148 (1466)
T PTZ00265 1069 LWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDV 1148 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 99999999999999999999999999999999999888777666667888899999999999999999999987654321
Q ss_pred CCCCCcc---cccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC--------
Q 000851 992 DDPASKE---VTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-------- 1060 (1253)
Q Consensus 992 ~~~~~~~---~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-------- 1060 (1253)
.+..... ++..+|.|+|+||+|+||++++.+||+|+||+|+|||++||||+||||||||+++|+|||+|
T Consensus 1149 ~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~ 1228 (1466)
T PTZ00265 1149 RDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVF 1228 (1466)
T ss_pred CCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccc
Confidence 1111111 12345789999999999977667899999999999999999999999999999999999999
Q ss_pred ----------------------------------------------CccEEEECCccCCCCCHHHHhcceEEEccCCCcc
Q 000851 1061 ----------------------------------------------ISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALF 1094 (1253)
Q Consensus 1061 ----------------------------------------------~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf 1094 (1253)
++|+|++||+|++++++++||++|+||||||+||
T Consensus 1229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF 1308 (1466)
T PTZ00265 1229 KNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF 1308 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc
Confidence 6999999999999999999999999999999999
Q ss_pred cccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCC
Q 000851 1095 STTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSA 1174 (1253)
Q Consensus 1095 ~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~ 1174 (1253)
+|||||||.+|.|+++++|+++|++.|++++||.+||+||||.|||+|.+|||||||||||||||+|+|+|||||||||+
T Consensus 1309 ~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSa 1388 (1466)
T PTZ00265 1309 NMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSS 1388 (1466)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHc--CCceEEEEccCchhhhccCEEEEEeC----CEE-EEecChhHHhhcccchHHHHHHHh
Q 000851 1175 LDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQ----GKV-AEIGSHEQLLRKENGIYKQLIRLQ 1244 (1253)
Q Consensus 1175 LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~----G~i-ve~Gt~~eLl~~~~g~y~~L~~~~ 1244 (1253)
||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|+|+|+||+++++|.|++|++.|
T Consensus 1389 LD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1389 LDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred cCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 99999999999999984 69999999999999999999999999 995 499999999984589999999876
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.7e-162 Score=1528.34 Aligned_cols=1091 Identities=22% Similarity=0.308 Sum_probs=867.0
Q ss_pred HHHHHHHHHHHH----HHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 122 TGERQTARLRLK----YLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVWQ 197 (1253)
Q Consensus 122 ~~~~~~~~lR~~----l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1253)
...+...++|.. +|+|.++++-.--.. .++|++++.+++|++++.++... +..+....+.+++++.+++..--.
T Consensus 265 ~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~-~t~G~ivNlms~D~~ri~~~~~~-~h~~w~~Plqi~~~l~lLy~~LG~ 342 (1381)
T KOG0054|consen 265 VSFRVGMRLRSALISAIYRKALRLSNSARGE-TTVGEIVNLMSVDAQRLSDAACF-LHLLWSAPLQIILALYLLYGLLGP 342 (1381)
T ss_pred HHHhhhhhHHHHHHHHHHHhhhcCchhhccC-CCcchhhhhhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCh
Confidence 445556666665 455666665554433 47999999999999999998542 233344444444433333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 198 LTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGV 277 (1253)
Q Consensus 198 l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 277 (1253)
-+++.++++.+++.+..+++++.++...+..+..++....++|.++|||+||.|+||+.+.++.++.++++.+.-.|...
T Consensus 343 sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~ 422 (1381)
T KOG0054|consen 343 SALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAY 422 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24555555666666788899999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000851 278 AKGIGVGLTYGLLFCAWALLLWYAGIL-VRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKEN 356 (1253)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~g~~~-v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~ 356 (1253)
..++...+..+...++.++ .++++. ...+.+|+..+|+.+.++..+-.|+..++..+..+.++.++.+|+.+++..+
T Consensus 423 ~~~~~~~~~~~~p~lv~~~--tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~ 500 (1381)
T KOG0054|consen 423 LSALNSFLNFFSPVLVSVV--TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSE 500 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 8887766655555554443 344454 4566788888888877777777899999999999999999999999999765
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEE
Q 000851 357 SHSSERPGDDGITLPKLAGQIEFSEVCFAYPSR-PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKI 435 (1253)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 435 (1253)
+..+ . ........+.+..|+++|.+|+|++. +++.|+||||+|++|+.+|||||.|||||+|+..|+|+.+..+|++
T Consensus 501 e~~~-~-~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v 578 (1381)
T KOG0054|consen 501 ELDP-D-SVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSV 578 (1381)
T ss_pred ccCc-c-ccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceE
Confidence 4322 1 11101122233469999999999752 3349999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCC
Q 000851 436 LLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQL 515 (1253)
Q Consensus 436 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~L 515 (1253)
.++| .++||||+||+|++||||||.||.| .+.+++.++.+.|++.++++.||.|+.|.|||+|.+|
T Consensus 579 ~v~g-------------siaYv~Q~pWI~ngTvreNILFG~~-~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinL 644 (1381)
T KOG0054|consen 579 AVNG-------------SVAYVPQQPWIQNGTVRENILFGSP-YDEERYDKVIKACALKKDLEILPFGDLTEIGERGINL 644 (1381)
T ss_pred EEcC-------------eEEEeccccHhhCCcHHHhhhcCcc-ccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCC
Confidence 9998 4999999999999999999999987 4678899999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHH-HHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEee
Q 000851 516 SGGQKQRIAIARAVLRNPKILLLDEATSALDAESEL-IVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 594 (1253)
Q Consensus 516 SgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~-~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 594 (1253)
||||||||+||||+|+|+||++||||.||+|+++.+ .+.++++.+.++||+|+|||.++.+++||+|++|+||+|++.|
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~G 724 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESG 724 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEeccc
Confidence 999999999999999999999999999999999765 5667777788999999999999999999999999999999999
Q ss_pred CcchhhhcCchHHHHHHhhhcccCCC-CCcccCC-CCCCCCCCCCCCCCcccchh--hhhhhhhhhccccCCCCCcchHH
Q 000851 595 THVDLISKGGEYAALVNLQSSEHLSN-PSSICYS-GSSRYSSFRDFPSSRRYDVE--FESSKRRELQSSDQSFAPSPSIW 670 (1253)
Q Consensus 595 ~~~~l~~~~~~y~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 670 (1253)
+|+||++.++.|.++......+...+ +...... ........+.........+. ..........+.+++..+...+.
T Consensus 725 ty~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~ 804 (1381)
T KOG0054|consen 725 TYEELLKSGGDFAELAHEEESEQEEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWS 804 (1381)
T ss_pred CHHHHHhcchhHHHHhhccchhhccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeHH
Confidence 99999999999998854333222221 0000000 00000000000000000000 00000000000001122222222
Q ss_pred HHHHHhhchhHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHH---hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 671 ELLKLNAAEWPYAVLGS-VGAILAGMEAPLFALGITHILTAFYSPHDSQIK---RVVDQVALIFVGLAVVTIPVYLLQHY 746 (1253)
Q Consensus 671 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~ 746 (1253)
-+..|.+...++....+ ++.. ..........+.|.++|.+...... .....+.++|.+++++..++..++.+
T Consensus 805 vY~~Y~~a~~g~~~~~~~~~~~----v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~ 880 (1381)
T KOG0054|consen 805 VYKKYIKAAGGFLLVLLILLLF----VLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSF 880 (1381)
T ss_pred HHHHHHHhcccHHHHHHHHHHH----HHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222222111 1111 1122233455667777765432211 24567889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000851 747 FYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSW 826 (1253)
Q Consensus 747 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 826 (1253)
.+...+.+.+++||++++++++|.||+|||. +|+|+|+|||++|++.+|..++..+..++++++.+++.++++.+..|
T Consensus 881 ~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt--TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P 958 (1381)
T KOG0054|consen 881 LFAKGGLKASRKLHDKLLNSILRAPMSFFDT--TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTP 958 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcchhcCC--CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhH
Confidence 9999999999999999999999999999996 89999999999999999999999999999999999999988888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH----HHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHH
Q 000851 827 RLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAY----SRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQA 902 (1253)
Q Consensus 827 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~ 902 (1253)
+. +++++|+.++.+++ +++....+++.++.. +..-+|+.|++.|+.|||||+.+++|.+++....|.+.+..
T Consensus 959 ~f---li~~~pl~v~~~~~-~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~ 1034 (1381)
T KOG0054|consen 959 WF---LIAIIPLGVIYYFV-QRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAF 1034 (1381)
T ss_pred HH---HHHHHHHHHHHHHH-HHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHH
Confidence 55 44555665555444 445555677777654 34559999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 903 LLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGI 982 (1253)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~ 982 (1253)
+.......|...-.+++..+..+.+..+....-... .+.|.+..++.+.+.....+...+....+++..+.+++|+.++
T Consensus 1035 f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~-~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY 1113 (1381)
T KOG0054|consen 1035 FLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGL-ISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEY 1113 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHH
Confidence 888777777777777776665555544443332222 6688888888888888899999999999999999999999999
Q ss_pred hcccccCCCCCCC--CcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC
Q 000851 983 LYRKTAIQPDDPA--SKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP 1060 (1253)
Q Consensus 983 ~~~~~~~~~~~~~--~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p 1060 (1253)
.+.+++.+.+.+. .++.||.+|.|+|+|++.+|... .++|||||||+|+||||||||||||||||||+++|+|+.+|
T Consensus 1114 ~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~ 1192 (1381)
T KOG0054|consen 1114 TDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEP 1192 (1381)
T ss_pred hcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCc
Confidence 9876662222212 24457999999999999999633 35799999999999999999999999999999999999999
Q ss_pred CccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccC
Q 000851 1061 ISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGD 1140 (1253)
Q Consensus 1061 ~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge 1140 (1253)
.+|+|.|||+||+++++++||++++++||||+||+||+|+||||. .+.+|+++|+|++++++.++|+++|+|||++|.|
T Consensus 1193 ~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf-~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~e 1271 (1381)
T KOG0054|consen 1193 AEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPF-DEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSE 1271 (1381)
T ss_pred cCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcc-cccCHHHHHHHHHHhChHHHHhhCCcCCCceecC
Confidence 999999999999999999999999999999999999999999996 4789999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEE
Q 000851 1141 RGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKV 1220 (1253)
Q Consensus 1141 ~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~i 1220 (1253)
+|.|+|.||||++||||||||++|||+|||||+++|++|+..||++|++.|++||||+||||++||.+||||+|||+|+|
T Consensus 1272 gG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v 1351 (1381)
T KOG0054|consen 1272 GGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRV 1351 (1381)
T ss_pred CCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecChhHHhhcccchHHHHHHHhh
Q 000851 1221 AEIGSHEQLLRKENGIYKQLIRLQQ 1245 (1253)
Q Consensus 1221 ve~Gt~~eLl~~~~g~y~~L~~~~~ 1245 (1253)
+|+|+|++|++++++.|++++.+..
T Consensus 1352 ~EfdsP~~Ll~~~~S~f~~~l~~~~ 1376 (1381)
T KOG0054|consen 1352 VEFDSPAELLSDKDSLFSSLLKEAA 1376 (1381)
T ss_pred eecCChHHHHhCCcchHHHHHHHHH
Confidence 9999999999988999987776543
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.6e-158 Score=1589.07 Aligned_cols=1150 Identities=20% Similarity=0.254 Sum_probs=853.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 53 FLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVAFWMQTGERQTARLRL 132 (1253)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 132 (1253)
+++.++.++..++....|++++.++|.+.... . .. .... ++..+++..++..++..-..+...+++.++...+|.
T Consensus 304 ~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~--~-~~-~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~ 378 (1622)
T PLN03130 304 WLGGFFKIGNDLSQFVGPLLLNLLLESMQNGE--P-AW-IGYI-YAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVA 378 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--c-ch-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555556666666667778999998764321 1 11 1111 111111111111111111111234677788888888
Q ss_pred HHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 133 KYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVA 212 (1253)
Q Consensus 133 ~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~~ 212 (1253)
.+|+|+++++..++++ .++|++++++++|++++++++. .+..++..++.+++++++++..-...+++.++++.+++.+
T Consensus 379 ~i~~k~L~l~~~~~~~-~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l 456 (1622)
T PLN03130 379 AVFRKSLRLTHEGRKK-FTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPI 456 (1622)
T ss_pred HHHHHHhcCChhhcCC-CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987 5899999999999999999874 4566666666665555544432222222222223344445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 213 GGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFC 292 (1253)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1253)
..++.+++++..++.++..++..+.+.|.++||++||+|++|+.+.+++++..+++.+...+.....++...+.....
T Consensus 457 ~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~-- 534 (1622)
T PLN03130 457 QTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIP-- 534 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 566778888888888899999999999999999999999999999999999888887777776666554443322222
Q ss_pred HHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCC
Q 000851 293 AWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPK 372 (1253)
Q Consensus 293 ~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~ 372 (1253)
..+.++++|++.+.+|.+|+|.+++++.++..+..|+..++..+..+.++.++++||.++++.++..+ . +... ...
T Consensus 535 ~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~-~--~~~~-~~~ 610 (1622)
T PLN03130 535 VLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVL-L--PNPP-LEP 610 (1622)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccc-c--cCCc-ccC
Confidence 13456678999999999999999998877777778999999999999999999999999997654321 1 0100 111
Q ss_pred CCCcEEEEEEEEECCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCC-cEEEECCeeCCCCCHHHH
Q 000851 373 LAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS-GKILLDGHDLKSLQLKWL 450 (1253)
Q Consensus 373 ~~~~i~~~~v~f~y~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-G~i~~~g~~~~~~~~~~~ 450 (1253)
..+.|+++||+|+|++++ +++|+|+||+|++||+++||||||||||||+++|+|+++|++ |+|.+
T Consensus 611 ~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l------------- 677 (1622)
T PLN03130 611 GLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI------------- 677 (1622)
T ss_pred CCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE-------------
Confidence 134799999999997532 459999999999999999999999999999999999999999 99985
Q ss_pred hcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000851 451 REQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVL 530 (1253)
Q Consensus 451 r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~ 530 (1253)
|++|+||+|+||||++||||||.||+| .+++++.++++.|+++++++.||+|++|.|||+|.+|||||||||+||||++
T Consensus 678 ~~~Iayv~Q~p~LfngTIreNI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly 756 (1622)
T PLN03130 678 RGTVAYVPQVSWIFNATVRDNILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVY 756 (1622)
T ss_pred cCeEEEEcCccccCCCCHHHHHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 458999999999999999999999987 4789999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHH-HHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCchHHHH
Q 000851 531 RNPKILLLDEATSALDAESELIV-QRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAAL 609 (1253)
Q Consensus 531 ~~p~ililDE~ts~lD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~ 609 (1253)
++|+||||||||||||+++++.+ .++++...+++|+|+||||++.++.||+|++|++|+|+++|+|+||+++++.|+++
T Consensus 757 ~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l 836 (1622)
T PLN03130 757 SNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKL 836 (1622)
T ss_pred CCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHH
Confidence 99999999999999999999876 46677777899999999999999999999999999999999999999999999998
Q ss_pred HHhhhcccCCCCCcccC-CC--CCCCCCC---CCCCCCcccc-hhh-hhhhhhhhccccCCCCCcchHHHHHHHhhchhH
Q 000851 610 VNLQSSEHLSNPSSICY-SG--SSRYSSF---RDFPSSRRYD-VEF-ESSKRRELQSSDQSFAPSPSIWELLKLNAAEWP 681 (1253)
Q Consensus 610 ~~~~~~~~~~~~~~~~~-~~--~~~~~~~---~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1253)
+..+...+......... .. ....... .......... ... ......+.++..........++++++.. +.++
T Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~-g~~~ 915 (1622)
T PLN03130 837 MENAGKMEEYVEENGEEEDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNAL-GGAW 915 (1622)
T ss_pred HHhcccccccccccccccccccccccccccccccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHh-ccHH
Confidence 86543211110000000 00 0000000 0000000000 000 0000000000001111111222222211 1111
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 682 YAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRL 761 (1253)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 761 (1253)
.+.+.+++.++. ..+. .+...|..+|.+...........|.++|++++++..++.+++.+++...+.+.+.++|.
T Consensus 916 ~~~~~~~~~~~~----~~~~-~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~ 990 (1622)
T PLN03130 916 VVMILFLCYVLT----EVFR-VSSSTWLSEWTDQGTPKTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHD 990 (1622)
T ss_pred HHHHHHHHHHHH----HHHH-HHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211111111111 1111 12334444443221111112345677788888888889999999999999999999999
Q ss_pred HHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000851 762 SMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIG 841 (1253)
Q Consensus 762 ~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~ 841 (1253)
+++++++++|++|||. +++|+++||+++|++.++..++..+..++..++.+++.++++++++|.. +++++|+.++
T Consensus 991 ~l~~~ll~~p~~ffd~--~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~---~~~~~pl~~~ 1065 (1622)
T PLN03130 991 AMLGSILRAPMSFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTIS---LWAIMPLLVL 1065 (1622)
T ss_pred HHHHHHHcCCHHHhcc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 9999999999999984 8999999999999999999999999999999998888888888777632 2233444333
Q ss_pred HHHHHHHHHhhHHHHHH----HHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000851 842 AFVAEQLFLKGFGGDYN----RAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQ 917 (1253)
Q Consensus 842 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1253)
+.+... +..+..++.+ ...++..+++.|+++|++|||+|+.+++|.+.+.+..+...+..+.......|.....+
T Consensus 1066 ~~~~~~-~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~ 1144 (1622)
T PLN03130 1066 FYGAYL-YYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLE 1144 (1622)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322222 2222333333 33455678999999999999999999999988888888777765554444444333333
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-CC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 000851 918 LLSLCSYALGLWYASVLIKQKG-SN-----FGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQP 991 (1253)
Q Consensus 918 ~~~~~~~~~~~~~g~~lv~~~~-~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 991 (1253)
++.. ++.++.+...+..+. .. .+.+...+.+.......+..+...+..+...+.+++|+.++++.+++.+.
T Consensus 1145 ~~~~---~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~ 1221 (1622)
T PLN03130 1145 TLGG---LMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPL 1221 (1622)
T ss_pred HHHH---HHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccc
Confidence 3322 222222333333322 11 12222233334444555666666777888999999999999876554322
Q ss_pred CCC--CCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECC
Q 000851 992 DDP--ASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDG 1069 (1253)
Q Consensus 992 ~~~--~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG 1069 (1253)
..+ ...+.++.+|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||
T Consensus 1222 ~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG 1300 (1622)
T PLN03130 1222 VIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDG 1300 (1622)
T ss_pred cccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECC
Confidence 111 111224567899999999999632 34799999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhH
Q 000851 1070 YDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 1149 (1253)
Q Consensus 1070 ~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQ 1149 (1253)
+||++++++++|++|++|||||+||+|||||||+|++ +.+|+|+|+|++++++++||+++|+||||+|||+|.+|||||
T Consensus 1301 ~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQ 1379 (1622)
T PLN03130 1301 CDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQ 1379 (1622)
T ss_pred EecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHH
Confidence 9999999999999999999999999999999999986 579999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHH
Q 000851 1150 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1150 kQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||||||||||+|+|+|||||||||+||++||+.|+++|++.+++||+|+||||++|+.+||||+|||+|+|+|+|+|+||
T Consensus 1380 rQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eL 1459 (1622)
T PLN03130 1380 RQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENL 1459 (1622)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccchHHHHHHHhhc
Q 000851 1230 LRKENGIYKQLIRLQQD 1246 (1253)
Q Consensus 1230 l~~~~g~y~~L~~~~~~ 1246 (1253)
+++++|.|++|++.+..
T Consensus 1460 l~~~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1460 LSNEGSAFSKMVQSTGA 1476 (1622)
T ss_pred HhCCCCHHHHHHHHcCh
Confidence 98667999999987654
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.9e-158 Score=1585.45 Aligned_cols=1149 Identities=19% Similarity=0.248 Sum_probs=856.6
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 53 FLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVAFWMQTGERQTARLRL 132 (1253)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 132 (1253)
+++.++.++..++....|++++.++|.+.... . ... .. .++.++++..++..++.....+...+.+.++...+|.
T Consensus 304 ~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~--~-~~~-~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~ 378 (1495)
T PLN03232 304 WLGGIFKIGHDLSQFVGPVILSHLLQSMQEGD--P-AWV-GY-VYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVA 378 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--c-cch-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666667677778999999764321 1 110 11 1111111111122222111122235677788888888
Q ss_pred HHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH
Q 000851 133 KYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVP---LI 209 (1253)
Q Consensus 133 ~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p---l~ 209 (1253)
.+|+|+++++..++++ .++|++++++++|++.+++.+ ..+..++..++.+++++++++ +.+++.+++.++ ++
T Consensus 379 ~i~~k~l~l~~~~~~~-~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~---~~lg~~~l~~~~v~~l~ 453 (1495)
T PLN03232 379 AIFHKSLRLTHEARKN-FASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLY---QQLGVASLFGSLILFLL 453 (1495)
T ss_pred HHHHHHhcCChhhcCC-CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHH
Confidence 9999999999999987 589999999999999999986 445555555555444443322 334443332222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 210 AVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGL 289 (1253)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1253)
+.+..++.++.++..++.++..++..+.+.|.++||++||+|++|+.+.+++++..+++.+...+.....++...+....
T Consensus 454 ~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~ 533 (1495)
T PLN03232 454 IPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSI 533 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23456678888888999999999999999999999999999999999999999998888888877776665543322222
Q ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Q 000851 290 LFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGIT 369 (1253)
Q Consensus 290 ~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~ 369 (1253)
. ..+.++++|++++.+|.+|+|.+++++.++.....|+..+...+..+.++.+|++||.++++.+++.. . ... .
T Consensus 534 ~--~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~-~--~~~-~ 607 (1495)
T PLN03232 534 P--VVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERIL-A--QNP-P 607 (1495)
T ss_pred H--HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccc-c--ccC-C
Confidence 2 22334688999999999999999999877777788999999999999999999999999997655322 1 111 1
Q ss_pred CCCCCCcEEEEEEEEECCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH
Q 000851 370 LPKLAGQIEFSEVCFAYPSR-PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK 448 (1253)
Q Consensus 370 ~~~~~~~i~~~~v~f~y~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~ 448 (1253)
.....+.|+++|++|+|+++ ++++|+|+||+|++||+++||||||||||||+++|+|+|+|++|.+.
T Consensus 608 ~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------ 675 (1495)
T PLN03232 608 LQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------ 675 (1495)
T ss_pred cCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------
Confidence 11123479999999999853 24599999999999999999999999999999999999999998763
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
++|++|+||+|+||||++||||||.||+| .++++++++++.|+++++++.||+||+|.|||+|.+||||||||||||||
T Consensus 676 ~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARA 754 (1495)
T PLN03232 676 VIRGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARA 754 (1495)
T ss_pred EecCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHH
Confidence 35678999999999999999999999986 68899999999999999999999999999999999999999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHH-HHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCchHH
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQR-ALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYA 607 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~ 607 (1253)
++++|+||||||||||||+++++.+.+ +++...+++|+|+||||++.++.||+|++|++|+|+++|+|+||+++++.|+
T Consensus 755 ly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~ 834 (1495)
T PLN03232 755 VYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFK 834 (1495)
T ss_pred HhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHH
Confidence 999999999999999999999987754 5666678999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccCCCCCcc-cCCCCC-CCCCCCCCCCCcccchhhhh-hh--hhhhccccCCCCCcchHHHHHHHhhchhH-
Q 000851 608 ALVNLQSSEHLSNPSSI-CYSGSS-RYSSFRDFPSSRRYDVEFES-SK--RRELQSSDQSFAPSPSIWELLKLNAAEWP- 681 (1253)
Q Consensus 608 ~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 681 (1253)
+++..+........... ...... ......+............. .+ ..++++ +..+...+..+..+.+...+
T Consensus 835 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~---~~~g~v~~~vy~~y~~~~~~~ 911 (1495)
T PLN03232 835 KLMENAGKMDATQEVNTNDENILKLGPTVTIDVSERNLGSTKQGKRGRSVLVKQEE---RETGIISWNVLMRYNKAVGGL 911 (1495)
T ss_pred HHHHhcccccccccccccccccccccccccccccccccccccccccchhhhhhHHH---HhcCcccHHHHHHHHHHcCcH
Confidence 98876542211110000 000000 00000000000000000000 00 000000 11111122222222222111
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 682 YAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRL 761 (1253)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 761 (1253)
++...+++..+. ...+. .....|..+|.+...........|.++|++++++..++.+++.+++...+.+++.++|.
T Consensus 912 ~~~~~~~~~~~~---~~~~~-~~~~~wl~~w~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 987 (1495)
T PLN03232 912 WVVMILLVCYLT---TEVLR-VSSSTWLSIWTDQSTPKSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHD 987 (1495)
T ss_pred HHHHHHHHHHHH---HHHHH-HHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111111 11111 23445555554322110112356788889999999999999999999999999999999
Q ss_pred HHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000851 762 SMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIG 841 (1253)
Q Consensus 762 ~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~ 841 (1253)
+++++++++|++||| .+++|+++||+++|++.++..++..+..++..++.++++++++++.++.. .++++|+.++
T Consensus 988 ~l~~~ll~~p~~ff~--~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~---~~~~~~~~~~ 1062 (1495)
T PLN03232 988 AMLNSILRAPMLFFH--TNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTIS---LWAIMPLLIL 1062 (1495)
T ss_pred HHHHHHHcCCeeeeC--cCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 999999999999998 48999999999999999999999999988888888888877777666432 2233344333
Q ss_pred HHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000851 842 AFVAEQLFL---KGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQL 918 (1253)
Q Consensus 842 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (1253)
+.+....+. +...+......+...+++.|+++|++|||+|+.++++.+++.+..+...+..+.......|.......
T Consensus 1063 ~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~ 1142 (1495)
T PLN03232 1063 FYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLET 1142 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322222221 22222333445566789999999999999999999999988888887777665544443333222222
Q ss_pred HHHHHHHHHHHHHHHHHHh-cCC----CHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC
Q 000851 919 LSLCSYALGLWYASVLIKQ-KGS----NFGD-IMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPD 992 (1253)
Q Consensus 919 ~~~~~~~~~~~~g~~lv~~-~~~----~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~ 992 (1253)
+ ..++.++.+...+.. +.+ .+.. +..++.+......++..+...+.+++.+..+.+|+.++++.+++.+..
T Consensus 1143 ~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~ 1219 (1495)
T PLN03232 1143 L---GGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAI 1219 (1495)
T ss_pred H---HHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 2 222222333333332 322 1111 222333334455566777788889999999999999998765543321
Q ss_pred CCC--CcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCc
Q 000851 993 DPA--SKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGY 1070 (1253)
Q Consensus 993 ~~~--~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~ 1070 (1253)
... ..+.++.+|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+
T Consensus 1220 ~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~ 1298 (1495)
T PLN03232 1220 IENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDC 1298 (1495)
T ss_pred ccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCE
Confidence 111 11224567889999999999632 357999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1071 DIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1071 di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
|+++++++++|++|++|||||+||+|||||||++++ +++|+|+++|+++++++++|+++|+||||++||+|.+||||||
T Consensus 1299 di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQr 1377 (1495)
T PLN03232 1299 DVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQR 1377 (1495)
T ss_pred EhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHH
Confidence 999999999999999999999999999999999975 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHh
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
|||||||||+|+|+|||||||||+||++||+.|+++|++.+++||+|+||||++++.+||+|+|||+|+|+|+|+|+||+
T Consensus 1378 QrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl 1457 (1495)
T PLN03232 1378 QLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELL 1457 (1495)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccchHHHHHHHhhcc
Q 000851 1231 RKENGIYKQLIRLQQDK 1247 (1253)
Q Consensus 1231 ~~~~g~y~~L~~~~~~~ 1247 (1253)
++++|.|++|++.+...
T Consensus 1458 ~~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1458 SRDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred hCCCCHHHHHHHHhChh
Confidence 96667999999877543
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.7e-152 Score=1535.69 Aligned_cols=1168 Identities=19% Similarity=0.244 Sum_probs=880.3
Q ss_pred hHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 35 GSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWI 114 (1253)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1253)
..++.+++.+++. ++.+++..++..++....|++++.++|.+.... .+ .... ..++..++++.++..++...
T Consensus 306 sl~~~l~~~~~~~----~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~-~~-~~~g--~~~~~~~~~~~~~~~~~~~~ 377 (1522)
T TIGR00957 306 SLFKVLYKTFGPY----FLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPM-AP-DWQG--YFYTGLLFVCACLQTLILHQ 377 (1522)
T ss_pred cHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cc-cchH--HHHHHHHHHHHHHHHHHHHH
Confidence 3445555544322 233344444555555556668899999764321 11 1111 11112222222233333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 115 GVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTS 194 (1253)
Q Consensus 115 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1253)
..+...+.+.++...++..+|+|+++++..++++ .++|++++++++|++++.+.. ..+..++..++.+++++++++..
T Consensus 378 ~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~-~~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~~~ 455 (1522)
T TIGR00957 378 YFHICFVSGMRIKTAVMGAVYRKALVITNSARKS-STVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLWLN 455 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCC-CCHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344566788899999999999999999999987 589999999999999999865 34455555555555555443332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 195 VWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKK 274 (1253)
Q Consensus 195 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 274 (1253)
-...+++.++++++++.+..++.+++++..++.++..++..+.+.|.++||++||+|++|+.+.+++++.++++.+...+
T Consensus 456 ~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~ 535 (1522)
T TIGR00957 456 LGPSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKK 535 (1522)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 22234455555666667777888899999999999999999999999999999999999999999999998888877766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 275 SGVAKGIGVGLTYGLLFCAWALLLWYAGILVRH--GDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISI 352 (1253)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~--g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~ 352 (1253)
......+......... ..+.++.++.+.+.. +.++.+.+|+.+.++.....|+..+...+..++++.+|++||.++
T Consensus 536 ~~~~~~~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~ 613 (1522)
T TIGR00957 536 SAYLHAVGTFTWVCTP--FLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIF 613 (1522)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665544332221111 122233456676663 568899988877666666779999999999999999999999999
Q ss_pred HhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCC
Q 000851 353 IKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS 432 (1253)
Q Consensus 353 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 432 (1253)
++.+++.+ .........+...+.|+++|++|+|++.++++|+|+||++++||+++|+||||||||||+++|+|+++|++
T Consensus 614 l~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~ 692 (1522)
T TIGR00957 614 LSHEELEP-DSIERRTIKPGEGNSITVHNATFTWARDLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVE 692 (1522)
T ss_pred HcCccccc-ccccccccCCCCCCcEEEEEeEEEcCCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCC
Confidence 97654321 10000000011123799999999997544459999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCC
Q 000851 433 GKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGG 512 (1253)
Q Consensus 433 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g 512 (1253)
|+|.+|| +|+||+|+||+|++||+|||.+|.+ .+++++.++++.+++.+++..+|+|++|.+|++|
T Consensus 693 G~i~~~g-------------~i~yv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g 758 (1522)
T TIGR00957 693 GHVHMKG-------------SVAYVPQQAWIQNDSLRENILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKG 758 (1522)
T ss_pred cEEEECC-------------EEEEEcCCccccCCcHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCC
Confidence 9999997 5999999999999999999999976 4567788888999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHH---HcCCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000851 513 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEK---IMSNRTTIVVAHRLSTVRDVDTIMVLKNGQ 589 (1253)
Q Consensus 513 ~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~---~~~~~t~i~itH~l~~~~~~d~i~vl~~G~ 589 (1253)
.+|||||||||+||||++++|+|+|||||||+||+++++.+.+.+.+ +.+++|+|+|||+++.+..||+|++|++|+
T Consensus 759 ~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~ 838 (1522)
T TIGR00957 759 VNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGK 838 (1522)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCe
Confidence 99999999999999999999999999999999999999999998853 456899999999999999999999999999
Q ss_pred EEEeeCcchhhhcCchHHHHHHhhhcccCCCC-C-c------ccCCCC---CC--------CCCC-CC---CCC---C--
Q 000851 590 VVESGTHVDLISKGGEYAALVNLQSSEHLSNP-S-S------ICYSGS---SR--------YSSF-RD---FPS---S-- 641 (1253)
Q Consensus 590 i~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~-~-~------~~~~~~---~~--------~~~~-~~---~~~---~-- 641 (1253)
|++.|+|++++++++.|.+++..+...+..+. . . ...... .. .... .. ... .
T Consensus 839 i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (1522)
T TIGR00957 839 ISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQS 918 (1522)
T ss_pred EEeeCCHHHHHhcchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccc
Confidence 99999999999988999888764432111000 0 0 000000 00 0000 00 000 0
Q ss_pred cc---c-c-hhhhhh----hhhhhccccCCCCCcchHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Q 000851 642 RR---Y-D-VEFESS----KRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFY 712 (1253)
Q Consensus 642 ~~---~-~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (1253)
.. . . .....+ ....++...........++.+++. .++...++.+++..+.. ....+..+|..+|
T Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~--~g~~~~~~~~~~~~~~~-----~~~~~~~~~l~~w 991 (1522)
T TIGR00957 919 RHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKA--IGLFITFLSIFLFVCNH-----VSALASNYWLSLW 991 (1522)
T ss_pred ccccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHH--cCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH
Confidence 00 0 0 000000 000000000001111122222221 11221111111111111 1122334444444
Q ss_pred CCCch--hHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHH
Q 000851 713 SPHDS--QIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLA 790 (1253)
Q Consensus 713 ~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s 790 (1253)
..... ........+..+|++++++..++.++..++....+.++..++|.+++++++++|++|||. +++|+++||++
T Consensus 992 ~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnR~s 1069 (1522)
T TIGR00957 992 TDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER--TPSGNLVNRFS 1069 (1522)
T ss_pred hccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc--CChHHHHHHHH
Confidence 32210 001112345667888888888888888899999999999999999999999999999984 89999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000851 791 ADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVARE 870 (1253)
Q Consensus 791 ~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 870 (1253)
+|++.++..++..+..++..++.+++.++++++.+|.++++++.+++++++......+..+...+......+...+++.|
T Consensus 1070 ~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E 1149 (1522)
T TIGR00957 1070 KELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNE 1149 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 99999999999999999999999999988888888766554443333332222222222222222333445667799999
Q ss_pred HHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHH
Q 000851 871 AIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIK-QKGSNFGDIMKSF 949 (1253)
Q Consensus 871 ~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~~~~~~g~~~~~~ 949 (1253)
+++|++|||+||++++|.+++.+..+...+..+.....+.|.....+++..+ +.++.+...+. .+.++.|.+..++
T Consensus 1150 ~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~g~l~~~l 1226 (1522)
T TIGR00957 1150 TLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNC---IVLFAALFAVISRHSLSAGLVGLSV 1226 (1522)
T ss_pred HhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 9999999999999999999999999999998887777777766655554432 33444444443 5778999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC-CC-CCcccccccCcEEEEeEEEECCCCCCcccccce
Q 000851 950 MVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPD-DP-ASKEVTEIKGNIELRNVSFKYPVRPDITIFENL 1027 (1253)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~-~~-~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~i 1027 (1253)
.+......++..+...+.++..++.+++|+.++++.+++.+.. +. ...+.++.+|.|+|+||+|+|+++ .++||+|+
T Consensus 1227 ~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~i 1305 (1522)
T TIGR00957 1227 SYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHI 1305 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-Ccccccce
Confidence 8888889999999999999999999999999998765443211 11 111224567899999999999744 24799999
Q ss_pred eEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCC
Q 000851 1028 NLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNE 1107 (1253)
Q Consensus 1028 sl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~ 1107 (1253)
||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+|||||||++..
T Consensus 1306 s~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~- 1384 (1522)
T TIGR00957 1306 NVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS- 1384 (1522)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHH
Q 000851 1108 DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEAL 1187 (1253)
Q Consensus 1108 ~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l 1187 (1253)
+++|+|+++|+++++++++|.++|+||||+|||+|.+||||||||+||||||+|+|+|||||||||+||++||+.|+++|
T Consensus 1385 ~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l 1464 (1522)
T TIGR00957 1385 QYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTI 1464 (1522)
T ss_pred CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHHHHHh
Q 000851 1188 DKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQ 1244 (1253)
Q Consensus 1188 ~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~~~~ 1244 (1253)
++.+++||||+||||++++.+||||+|||+|+|+|+|+|+||+++ +|.|++|+++.
T Consensus 1465 ~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1465 RTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred HHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 999999999999999999999999999999999999999999984 79999999863
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.5e-145 Score=1462.82 Aligned_cols=1171 Identities=18% Similarity=0.220 Sum_probs=882.1
Q ss_pred chHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 000851 34 SGSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAW 113 (1253)
Q Consensus 34 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1253)
...++.+++..++ .+++++++.++..++....|++++.+++.+... +. . ......++..++++.++..++..
T Consensus 232 ~~l~~~l~~~~~~----~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~--~~-~-~~~g~~l~~~l~~~~~~~~~~~~ 303 (1560)
T PTZ00243 232 LSLLRTLFAALPY----YVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDAD--NA-T-WGRGLGLVLTLFLTQLIQSVCLH 303 (1560)
T ss_pred cHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--Cc-c-hhHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555554332 233445555666666666677899999876322 11 1 11111111122222233344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhc-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 114 IGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDT-EARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGF 192 (1253)
Q Consensus 114 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~-~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1253)
...+...+.+.++...++..+|+|+++++...+.. +.++|++++.+++|++++.+++.. +..++..++.++++++++.
T Consensus 304 ~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~-~~~l~~~Pl~li~~~~lL~ 382 (1560)
T PTZ00243 304 RFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQY-CMYLWSSPMVLLLSILLLS 382 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 44555667778888888899999999999887752 147899999999999999999844 5667777888888787777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000851 193 TSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQG 272 (1253)
Q Consensus 193 ~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~ 272 (1253)
.+..+.+++.++++++++.+..++.++..+..++..+..++..+.+.|.++|||+||.+++|+.+.+++++.++++.+..
T Consensus 383 ~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l 462 (1560)
T PTZ00243 383 RLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYL 462 (1560)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666788888888888888888999999999999999999999999999999999999999999999999999888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 273 KKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISI 352 (1253)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~ 352 (1253)
.+......+...+......+.. ++.+++|.+.+|.+|++.+|+++.++..+..|+..++..+..+.++.+|++||.++
T Consensus 463 ~~~~~~~~~~~~~~~~~p~l~~--~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~f 540 (1560)
T PTZ00243 463 RDVQLARVATSFVNNATPTLMI--AVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTF 540 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777776655544444333332 23467788889999999999998888788889999999999999999999999999
Q ss_pred HhccCCCC----C--CC-------CC--C--------------CCC---------------------------CCCCCCc
Q 000851 353 IKENSHSS----E--RP-------GD--D--------------GIT---------------------------LPKLAGQ 376 (1253)
Q Consensus 353 l~~~~~~~----~--~~-------~~--~--------------~~~---------------------------~~~~~~~ 376 (1253)
|+.++... + .. .. . +.. .....+.
T Consensus 541 L~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (1560)
T PTZ00243 541 LECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPS 620 (1560)
T ss_pred HcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccc
Confidence 97643100 0 00 00 0 000 0001134
Q ss_pred EEEEEEEEECCC--------------------------------------CCCcccccceEEEeCCCEEEEEcCCCCcHH
Q 000851 377 IEFSEVCFAYPS--------------------------------------RPHMVFENLNFSVDAGKTFAFVGPSGSGKS 418 (1253)
Q Consensus 377 i~~~~v~f~y~~--------------------------------------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKS 418 (1253)
+.++|++|+++. .++++|+|+||+|++||+++|+||||||||
T Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKS 700 (1560)
T PTZ00243 621 VVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKS 700 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHH
Confidence 677887776431 123489999999999999999999999999
Q ss_pred HHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHh
Q 000851 419 TIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVE 498 (1253)
Q Consensus 419 Tl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~ 498 (1253)
||+++|+|+++|++|+|.++ ++||||+|+||+|++||+|||.++.+. +.+++.++.+.++++++++
T Consensus 701 TLL~~i~G~~~~~~G~i~~~-------------~~i~yv~Q~~~l~~~Tv~enI~~~~~~-~~~~~~~~~~~~~l~~~l~ 766 (1560)
T PTZ00243 701 TLLQSLLSQFEISEGRVWAE-------------RSIAYVPQQAWIMNATVRGNILFFDEE-DAARLADAVRVSQLEADLA 766 (1560)
T ss_pred HHHHHHhcCCCCCCcEEEEC-------------CeEEEEeCCCccCCCcHHHHHHcCChh-hHHHHHHHHHHhhhHHHHH
Confidence 99999999999999999864 469999999999999999999998753 4567788888899999999
Q ss_pred cCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHH-HHHHHcCCCeEEEEccCchhhh
Q 000851 499 GLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQR-ALEKIMSNRTTIVVAHRLSTVR 577 (1253)
Q Consensus 499 ~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~ 577 (1253)
.+|+|++|.+|++|.+|||||||||+||||++.+|+|||||||||+||+++++.+.+ .+....+|+|+|+|||+++.+.
T Consensus 767 ~l~~g~~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~ 846 (1560)
T PTZ00243 767 QLGGGLETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVP 846 (1560)
T ss_pred HhhccchHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999999999999999998877765 4444557899999999999999
Q ss_pred hcCEEEEEeCCEEEEeeCcchhhhcCchHHHHHHhhhcccCCCCC-cccC--CCCCCCC---CCCCC-CCCcccchhh--
Q 000851 578 DVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSSEHLSNPS-SICY--SGSSRYS---SFRDF-PSSRRYDVEF-- 648 (1253)
Q Consensus 578 ~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~-~~~~--~~~~~~~---~~~~~-~~~~~~~~~~-- 648 (1253)
.||+|++|++|++++.|+++++++. +.|..+............. .... ....... ..... ..........
T Consensus 847 ~ad~ii~l~~G~i~~~G~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1560)
T PTZ00243 847 RADYVVALGDGRVEFSGSSADFMRT-SLYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDG 925 (1560)
T ss_pred hCCEEEEEECCEEEEecCHHHHHhC-hHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999875 4677776542211110000 0000 0000000 00000 0000000000
Q ss_pred ---hh--hhhhhhccccCCCCCcchHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHH
Q 000851 649 ---ES--SKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVV 723 (1253)
Q Consensus 649 ---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1253)
.. ....+.++......++..++.+++... .+.+.+ ..++..+. .-....+..+|..+|..... ....
T Consensus 926 ~~~~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g-~~~~~~-~~l~~~~~----~~~~~~~~~~wl~~w~~~~~--~~~~ 997 (1560)
T PTZ00243 926 AALDAAAGRLMTREEKASGSVPWSTYVAYLRFCG-GLHAAG-FVLATFAV----TELVTVSSGVWLSMWSTRSF--KLSA 997 (1560)
T ss_pred cccccccchhhhHHHHhcCcccHHHHHHHHHHhh-hHHHHH-HHHHHHHH----HHHHHHHHHHHHHHhccccc--CCCc
Confidence 00 000000000011112222222222211 111111 11111110 00111223444445543211 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHH
Q 000851 724 DQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADR 803 (1253)
Q Consensus 724 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~ 803 (1253)
..|..+|+++.++..+..++..+.....+.+...++|.++|++++++|++|||. +++|+++||+++|++.++..++..
T Consensus 998 ~~~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~--~~~G~ilnR~s~Di~~id~~l~~~ 1075 (1560)
T PTZ00243 998 ATYLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT--TPLGRILNRFSRDIDILDNTLPMS 1075 (1560)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC--CCccHHHHHHHhhHHHHHHHHHHH
Confidence 345666777666666666677777777778888999999999999999999984 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH----HHHHHHHHHHHHHHHcchHHHH
Q 000851 804 LSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDY----NRAYSRATSVAREAIANIRTVA 879 (1253)
Q Consensus 804 l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~e~l~gi~tIr 879 (1253)
+..++..++.++++++++++.+|.+. ++++|+.++...+.. +..+..++. ....++..+++.|+++|++|||
T Consensus 1076 l~~~~~~~~~~i~~li~~~~~~p~~~---~~~i~~~~~~~~i~~-~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIr 1151 (1560)
T PTZ00243 1076 YLYLLQCLFSICSSILVTSASQPFVL---VALVPCGYLYYRLMQ-FYNSANREIRRIKSVAKSPVFTLLEEALQGSATIT 1151 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHH
Confidence 99999999999998888888887433 333444333322222 222233333 3455667899999999999999
Q ss_pred HcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHHH
Q 000851 880 AYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLI--KQKGSNFGDIMKSFMVLIITAL 957 (1253)
Q Consensus 880 a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv--~~~~~~~g~~~~~~~~~~~~~~ 957 (1253)
+|+.++++.+++.+.++...+..+.......|.....+++..+..++..+++.... ..+..+.|.+..++.+......
T Consensus 1152 af~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~ 1231 (1560)
T PTZ00243 1152 AYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTA 1231 (1560)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988887777777777777666665555555554433 2344678877777777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCC-------------------------CCCc----ccccccCcEEE
Q 000851 958 AVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDD-------------------------PASK----EVTEIKGNIEL 1008 (1253)
Q Consensus 958 ~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~-------------------------~~~~----~~~~~~g~I~~ 1008 (1253)
++..+...+.++..++.+++|+.++++..++++... +... +.++..|.|+|
T Consensus 1232 ~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f 1311 (1560)
T PTZ00243 1232 TLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVF 1311 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEE
Confidence 889999999999999999999999986443221000 0000 11224578999
Q ss_pred EeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEEEc
Q 000851 1009 RNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQ 1088 (1253)
Q Consensus 1009 ~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~ 1088 (1253)
+||+|+|++. .++||+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||++++++++|++|++||
T Consensus 1312 ~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVp 1390 (1560)
T PTZ00243 1312 EGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIP 1390 (1560)
T ss_pred EEEEEEeCCC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEEC
Confidence 9999999743 346999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC-CCEEE
Q 000851 1089 QEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN-PSILL 1167 (1253)
Q Consensus 1089 Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~-p~ILl 1167 (1253)
|||+||+|||||||+++ ++++|+|+|+|+++++++++|.++|+||||.|||+|.+|||||||||||||||+++ |+|||
T Consensus 1391 Qdp~LF~gTIreNIdp~-~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILl 1469 (1560)
T PTZ00243 1391 QDPVLFDGTVRQNVDPF-LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFIL 1469 (1560)
T ss_pred CCCccccccHHHHhCcc-cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 99999999999999986 47899999999999999999999999999999999999999999999999999996 89999
Q ss_pred EecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHHHHHhhc
Q 000851 1168 LDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQD 1246 (1253)
Q Consensus 1168 LDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1246 (1253)
||||||+||++||+.|+++|++.+++||+|+||||++++.+||+|+|||+|+|+|+|+|+||+++++|.|++|++.+..
T Consensus 1470 LDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~ 1548 (1560)
T PTZ00243 1470 MDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGR 1548 (1560)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 9999999999999999999999999999999999999999999999999999999999999998678999999987643
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.4e-143 Score=1442.13 Aligned_cols=1141 Identities=19% Similarity=0.258 Sum_probs=849.5
Q ss_pred HHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 60 FIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVAFWMQTGERQTARLRLKYLQSVL 139 (1253)
Q Consensus 60 ~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~ 139 (1253)
++..++....|++++.+++.+.... .. . ......++..++++.++..++.....+.....+.++...++..+|+|++
T Consensus 90 ~~~~~~~~~~P~ll~~li~~~~~~~-~~-~-~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L 166 (1490)
T TIGR01271 90 YFGEATKAVQPLLLGRIIASYDPFN-AP-E-REIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTL 166 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCC-CC-c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444455567899998863211 11 0 0011111222222223333444444455556677777777777899999
Q ss_pred cCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 140 KKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTIT 219 (1253)
Q Consensus 140 ~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~ 219 (1253)
+++...+++ .++|++++++++|++++.+++... ..++..++.+++++++++....+.+++.++++++++++..+++++
T Consensus 167 ~l~~~~~~~-~~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~ 244 (1490)
T TIGR01271 167 KLSSRVLDK-ISTGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQK 244 (1490)
T ss_pred hCCHHHhcC-CCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987 589999999999999999987654 445566666677777776666667788888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 220 MSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLW 299 (1253)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1253)
+.+..++.++..++..+.+.|.++|||+||+|++|+.+.+++++.+++..+...+..........+..+.. ..+.++.
T Consensus 245 ~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 322 (1490)
T TIGR01271 245 MMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSG--FFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 99999999999999999999999999999999999999999999999888888877766544433332222 2344556
Q ss_pred HHHHHHHcCCCChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEE
Q 000851 300 YAGILVRHGDTNGGKAFTTIINVIFSGFALG-QAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIE 378 (1253)
Q Consensus 300 ~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~-~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~ 378 (1253)
+++|.+.++ ++++.+|+++.++..+..++. .++..+..+.++.+|++||.++|+.++... . . . ......|+
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~-~--~--~--~~~~~~i~ 394 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKT-L--E--Y--NLTTTEVE 394 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-c--c--c--cCCCCceE
Confidence 677777655 688999988766655556654 577788899999999999999997653211 1 0 0 01123589
Q ss_pred EEEEEEECCCC--------------------------------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHc
Q 000851 379 FSEVCFAYPSR--------------------------------PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQR 426 (1253)
Q Consensus 379 ~~~v~f~y~~~--------------------------------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~ 426 (1253)
++|++|+|+.. .+++|+|+||+|++||+++|+||||||||||+++|+|
T Consensus 395 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G 474 (1490)
T TIGR01271 395 MVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMG 474 (1490)
T ss_pred EecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 99999999531 1248999999999999999999999999999999999
Q ss_pred cCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccc
Q 000851 427 LYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQT 506 (1253)
Q Consensus 427 ~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 506 (1253)
+++|++|+|.++| +|+||+|+||+|++||+|||.||.+ .+.+++.++++.+++.+++..+|+|++|
T Consensus 475 ~~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~t 540 (1490)
T TIGR01271 475 ELEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDKT 540 (1490)
T ss_pred CCCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhccccccc
Confidence 9999999999998 4999999999999999999999975 4456677778888899999999999999
Q ss_pred cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHH-HHHHHcCCCeEEEEccCchhhhhcCEEEEE
Q 000851 507 QVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQR-ALEKIMSNRTTIVVAHRLSTVRDVDTIMVL 585 (1253)
Q Consensus 507 ~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~vl 585 (1253)
.+|++|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+ .+.++.+++|+|+|||+++.+..||+|++|
T Consensus 541 ~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l 620 (1490)
T TIGR01271 541 VLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLL 620 (1490)
T ss_pred cccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999999987 467777899999999999999999999999
Q ss_pred eCCEEEEeeCcchhhhcCchHHHHHHhhhc------c---------------c-CC----CCCc------ccCCC--C--
Q 000851 586 KNGQVVESGTHVDLISKGGEYAALVNLQSS------E---------------H-LS----NPSS------ICYSG--S-- 629 (1253)
Q Consensus 586 ~~G~i~~~g~~~~l~~~~~~y~~~~~~~~~------~---------------~-~~----~~~~------~~~~~--~-- 629 (1253)
++|+|++.|+++++.+.++.|...+..... . . .. .+.. ..... .
T Consensus 621 ~~g~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (1490)
T TIGR01271 621 HEGVCYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKR 700 (1490)
T ss_pred ECCEEEEEcCHHHHHhcChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999877777666531000 0 0 00 0000 00000 0
Q ss_pred ---------------------------CCCCC-CCCCC-----------------C-Cc-----------c---------
Q 000851 630 ---------------------------SRYSS-FRDFP-----------------S-SR-----------R--------- 643 (1253)
Q Consensus 630 ---------------------------~~~~~-~~~~~-----------------~-~~-----------~--------- 643 (1253)
...+. ..+.. . .. .
T Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1490)
T TIGR01271 701 KQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMT 780 (1490)
T ss_pred cccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccc
Confidence 00000 00000 0 00 0
Q ss_pred cc--hhh-------hhh------------h---------hhh--------------------hccccCCCCCcchHHHHH
Q 000851 644 YD--VEF-------ESS------------K---------RRE--------------------LQSSDQSFAPSPSIWELL 673 (1253)
Q Consensus 644 ~~--~~~-------~~~------------~---------~~~--------------------~~~~~~~~~~~~~~~~~~ 673 (1253)
.. .+. ... . ..+ +++.......+..+++++
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~ 860 (1490)
T TIGR01271 781 HSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYI 860 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHH
Confidence 00 000 000 0 000 000000001111122222
Q ss_pred HHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCc--------h-h-H---------HhHHHHH-HHHHHHH
Q 000851 674 KLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHD--------S-Q-I---------KRVVDQV-ALIFVGL 733 (1253)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~-~---------~~~~~~~-~~~~~~l 733 (1253)
+. .+.+..+++.+++.++.. ....+.++|..+|.... . . . ......| .++|+++
T Consensus 861 ~~-~g~~~~~~~~~~~~~~~~-----~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1490)
T TIGR01271 861 TT-NRNLVFVLIFCLVIFLAE-----VAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGT 934 (1490)
T ss_pred Hh-cCcHHHHHHHHHHHHHHH-----HHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHH
Confidence 21 111122111111111111 22233344444443210 0 0 0 0011122 3445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 734 AVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVAL 813 (1253)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~ 813 (1253)
++...++.+++.+++...+.+.+.++|.+++++++++|++||+. +++|+++|||++|++.++..++..+..++..++.
T Consensus 935 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~ 1012 (1490)
T TIGR01271 935 ADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT--MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLI 1012 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556677788888999999999999999999999999999985 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH----HHHHHHHHHHHHHHHcchHHHHHcCcHHHHHH
Q 000851 814 TVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDY----NRAYSRATSVAREAIANIRTVAAYGIEKRISI 889 (1253)
Q Consensus 814 ~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~ 889 (1253)
+++.++++++++|.+++ +++|++++.+++...+ .+..++. ....+...+++.|+++|+.|||+||+++++.+
T Consensus 1013 ~i~~l~~i~~~~p~l~l---~~~~l~~~~~~~~~~~-~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~ 1088 (1490)
T TIGR01271 1013 VLGAIFVVSVLQPYIFI---AAIPVAVIFIMLRAYF-LRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFET 1088 (1490)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHH
Confidence 99999888888887644 3444433333222222 2223333 33445667999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 890 QFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDI 969 (1253)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 (1253)
++.+..+...+..+.......|......++..+......+++ +.....+.|.+..++.+......++..+...+.++
T Consensus 1089 ~~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~---~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~l 1165 (1490)
T TIGR01271 1089 LFHKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIA---IGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDV 1165 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987776666655555555444443332222211111 11122344444444555555566677777788899
Q ss_pred HHHHHHHHHHHHHhcccccCCCCCC----------------CCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeC
Q 000851 970 VKGSQALGPVFGILYRKTAIQPDDP----------------ASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSA 1033 (1253)
Q Consensus 970 ~~~~~a~~~i~~~~~~~~~~~~~~~----------------~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~ 1033 (1253)
...+.+++|+.++.+.+++.....+ ..++.+|..|.|+|+||+|+|+.. .++||+|+||+|+|
T Consensus 1166 e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~ 1244 (1490)
T TIGR01271 1166 DGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEG 1244 (1490)
T ss_pred HHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcC
Confidence 9999999999999866544321100 001124567899999999999743 46799999999999
Q ss_pred CcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHH
Q 000851 1034 GRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIE 1113 (1253)
Q Consensus 1034 Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~e 1113 (1253)
||+||||||||||||||+++|+|+|+ ++|+|+|||+|+++++++++|++|+||||||+||+||||+||++.. +.+|++
T Consensus 1245 GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdee 1322 (1490)
T TIGR01271 1245 GQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEE 1322 (1490)
T ss_pred CCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHH
Confidence 99999999999999999999999998 7999999999999999999999999999999999999999999864 679999
Q ss_pred HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCC
Q 000851 1114 LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEG 1193 (1253)
Q Consensus 1114 i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~ 1193 (1253)
+|+||++++++++|.++|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|++.|++.+++
T Consensus 1323 i~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~ 1402 (1490)
T TIGR01271 1323 IWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSN 1402 (1490)
T ss_pred HHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHHHHHhhccC
Q 000851 1194 RTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQDKN 1248 (1253)
Q Consensus 1194 ~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~~~~~~~~ 1248 (1253)
||||+||||++++.+||+|+||++|+|+|+|+|++|++ ++|.|++|++.+.+..
T Consensus 1403 ~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~-~~~~f~~l~~~~~~~~ 1456 (1490)
T TIGR01271 1403 CTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLN-ETSLFKQAMSAADRLK 1456 (1490)
T ss_pred CEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHc-CCcHHHHHHHHhChhc
Confidence 99999999999999999999999999999999999998 6899999998765433
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.8e-113 Score=1004.28 Aligned_cols=572 Identities=40% Similarity=0.618 Sum_probs=538.2
Q ss_pred hHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 35 GSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWI 114 (1253)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1253)
..++|++.|+++.++ .+..+.++.++.+....+.|.++|+++|.+.... +....+...+..+..+.++..+++++
T Consensus 133 ~~~~rl~~l~~~~~~-~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~----~~~~~~~~~~~~l~~l~~~~a~~~~~ 207 (716)
T KOG0058|consen 133 TLLKRLLGLLKPEWK-WLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGD----DSADALKRACTILLGLFLIGALANAI 207 (716)
T ss_pred hHHHHHHHHhchhHH-HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhcc----chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368899999998754 5667788888888888888999999999876511 11344555666777778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 115 GVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTS 194 (1253)
Q Consensus 115 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1253)
+.+++.++++++..++|.++|+++++++++|||. +++||++||+++|+..+.+.++..+...+++.++.++++++|+++
T Consensus 208 r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~-nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~ 286 (716)
T KOG0058|consen 208 RGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDE-NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSL 286 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhh
Confidence 9999999999999999999999999999999998 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 195 VWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKK 274 (1253)
Q Consensus 195 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 274 (1253)
||+|+++.++.+|++.++..+++++.++..++.|++.++++.+.+|.+++|||||+|+.|+.|.+||.+..++..+...|
T Consensus 287 S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k 366 (716)
T KOG0058|consen 287 SWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKK 366 (716)
T ss_pred hHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 275 SGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIK 354 (1253)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~ 354 (1253)
.+...+.+.+...+..++..+.++|||++++..|.||.|++.+|++|......++..+...++.++++..|.+|+||++|
T Consensus 367 ~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~d 446 (716)
T KOG0058|consen 367 EAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMD 446 (716)
T ss_pred HHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCC-CCCCcEEEEEEEEECCCCCCc-ccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCC
Q 000851 355 ENSHSSERPGDDGITLP-KLAGQIEFSEVCFAYPSRPHM-VFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS 432 (1253)
Q Consensus 355 ~~~~~~~~~~~~~~~~~-~~~~~i~~~~v~f~y~~~~~~-~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 432 (1253)
++|..+ . . +...| ..+|.|+|+||+|+||.+|+. ||+|+||+|+|||+||+||||||||||+++||.|||+|++
T Consensus 447 r~P~i~-~--~-G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pts 522 (716)
T KOG0058|consen 447 RKPRIP-L--T-GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTS 522 (716)
T ss_pred cCCCCC-C--C-CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 999876 2 2 33222 578999999999999998764 9999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCC
Q 000851 433 GKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGG 512 (1253)
Q Consensus 433 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g 512 (1253)
|+|++||+||+++++.+||++||+|.|||.||++||+|||+||.+++++|++.+||++|++|+||.++|+||||.|||+|
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKG 602 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000851 513 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVE 592 (1253)
Q Consensus 513 ~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~ 592 (1253)
.+|||||||||||||||++||.||||||||||||+++|..|+++|.+.++++|||+|||||+|+++||+|+|+++|+++|
T Consensus 603 ~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E 682 (716)
T KOG0058|consen 603 SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVE 682 (716)
T ss_pred ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCcchhhhcC-chHHHHHHhhhcc
Q 000851 593 SGTHVDLISKG-GEYAALVNLQSSE 616 (1253)
Q Consensus 593 ~g~~~~l~~~~-~~y~~~~~~~~~~ 616 (1253)
.|+|+||++++ |.|+++++.|...
T Consensus 683 ~G~h~eLl~~~~gly~~Lv~~q~~~ 707 (716)
T KOG0058|consen 683 MGTHDELLSKPNGLYAKLVQRQLDS 707 (716)
T ss_pred cccHHHHhhCcccHHHHHHHHhccc
Confidence 99999999997 8999999887644
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.2e-110 Score=976.57 Aligned_cols=576 Identities=36% Similarity=0.592 Sum_probs=544.6
Q ss_pred hHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 668 SIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYF 747 (1253)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 747 (1253)
.+++++.+.++.|+++..+.++..+......+.+...+++++.++.... ...........+.++.+...++.+++.++
T Consensus 134 ~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~--~~~~~~~~~~~l~~l~~~~a~~~~~r~~~ 211 (716)
T KOG0058|consen 134 LLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDD--SADALKRACTILLGLFLIGALANAIRGGL 211 (716)
T ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5779999999999999999999888888777778888888888776111 12334455666777788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000851 748 YTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWR 827 (1253)
Q Consensus 748 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 827 (1253)
+.++++++..++|..+|+++++++++|||. |.+|++++|++.|...+.+.++..+...+.+.+..++++.+|++++|.
T Consensus 212 ~~~a~~rv~~rlR~~lF~sil~QdiaFFD~--nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~ 289 (716)
T KOG0058|consen 212 LQYAGERVVARLRTDLFRSLLRQDIAFFDE--NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWR 289 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHH
Confidence 999999999999999999999999999995 889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHH
Q 000851 828 LAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGH 907 (1253)
Q Consensus 828 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 907 (1253)
|+++.++.+|++++...++.+++++.+++.+++.+++++...|.+++++|||+|+.|++..++|.+.+++..+...|...
T Consensus 290 Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 290 LTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000851 908 ISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKT 987 (1253)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~ 987 (1253)
..+++++..++...+....++|||+.++..|.++.|++.+++++......++..+...+.+++++..|.+|++++++++|
T Consensus 370 a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P 449 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKP 449 (716)
T ss_pred HhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEE
Q 000851 988 AIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLI 1067 (1253)
Q Consensus 988 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~i 1067 (1253)
..+++ ....+. ..+|.|+|+||+|+||+||+.|||+|+||+|+|||+||+||||||||||++++|+|||+|++|+|++
T Consensus 450 ~i~~~-G~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Ill 527 (716)
T KOG0058|consen 450 RIPLT-GTLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILL 527 (716)
T ss_pred CCCCC-Cccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 87765 222222 5789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000851 1068 DGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 1147 (1253)
Q Consensus 1068 dG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSg 1147 (1253)
||+||+++++++||++||+|.|||+||++||+|||.||.++++||||.+|+++|++|+||.++|+||||.|||+|.+|||
T Consensus 528 DG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSG 607 (716)
T KOG0058|consen 528 DGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSG 607 (716)
T ss_pred CCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChh
Q 000851 1148 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHE 1227 (1253)
Q Consensus 1148 GQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~ 1227 (1253)
||||||||||||+|||+||||||||||||+++|..||++|.+..+++|||+|||||+||++||+|+|+++|+|+|.|+|+
T Consensus 608 GQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~ 687 (716)
T KOG0058|consen 608 GQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHD 687 (716)
T ss_pred hHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccchHHHHHHHhhccCC
Q 000851 1228 QLLRKENGIYKQLIRLQQDKNP 1249 (1253)
Q Consensus 1228 eLl~~~~g~y~~L~~~~~~~~~ 1249 (1253)
||+++++|.|++|++.|....+
T Consensus 688 eLl~~~~gly~~Lv~~q~~~~~ 709 (716)
T KOG0058|consen 688 ELLSKPNGLYAKLVQRQLDSGE 709 (716)
T ss_pred HHhhCcccHHHHHHHHhcccCC
Confidence 9999888999999999875443
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.9e-106 Score=993.63 Aligned_cols=578 Identities=43% Similarity=0.721 Sum_probs=544.1
Q ss_pred cchHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q 000851 33 QSGSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSA 112 (1253)
Q Consensus 33 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1253)
.+.++++++++.+|. |.++++|++++++.|...|++.++++.++..+.... ..........+++++++++++.+++.
T Consensus 648 ~~~s~~~i~k~~~pe-~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~--~~~~~~~~~~~al~f~~l~~~~~i~~ 724 (1228)
T KOG0055|consen 648 EKVSFWRIFKLNKPE-WPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPD--DDELKREVRAWALIFLGLGIVSGITN 724 (1228)
T ss_pred ccccHHHHHHhccch-hHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC--hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999985 667899999999999999999999999999876322 11222222337888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 113 WIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGF 192 (1253)
Q Consensus 113 ~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1253)
+++.+++...++++..|+|...|+++++++++|||...++|.|.+|+.+|...++..+++.+..+++++..+++++++.|
T Consensus 725 ~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf 804 (1228)
T KOG0055|consen 725 FLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAF 804 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999866669999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000851 193 TSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQG 272 (1253)
Q Consensus 193 ~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~ 272 (1253)
+++|+|+++++++.|++++..+...+.+.....+..++..+.+..+.|+++|||||++|+.|+++.+.|.+..+...+..
T Consensus 805 ~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~ 884 (1228)
T KOG0055|consen 805 IYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSS 884 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 273 KKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISI 352 (1253)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~ 352 (1253)
.|.+.+.++..++.+.+.++.+++.+|||++++.+|.+++.+++.+++.+.+....+++.....+++.+|+.|+.+||++
T Consensus 885 ~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i 964 (1228)
T KOG0055|consen 885 FKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEI 964 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888888888999999999999999999999999
Q ss_pred HhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCc-ccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCC
Q 000851 353 IKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHM-VFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT 431 (1253)
Q Consensus 353 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~-~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~ 431 (1253)
+|++|.++ ++.+.+...++.+|+|+|+||+|+||.+|+. ||+|+||+|++|+++||||||||||||++.||.|||+|+
T Consensus 965 ~dr~~~i~-~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~ 1043 (1228)
T KOG0055|consen 965 LDRKPTID-PDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD 1043 (1228)
T ss_pred hcCCCCCC-CCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 99998776 3223344456788999999999999998876 999999999999999999999999999999999999999
Q ss_pred CcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCC
Q 000851 432 SGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEG 511 (1253)
Q Consensus 432 ~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~ 511 (1253)
+|.|.|||+|+++++++|||++||.|+|||.||++||||||+||.+.++++|+.+||+.|++|+||.+||+||||.|||+
T Consensus 1044 ~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGer 1123 (1228)
T KOG0055|consen 1044 AGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGER 1123 (1228)
T ss_pred CCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcc
Confidence 99999999999999999999999999999999999999999999666899999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEE
Q 000851 512 GTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVV 591 (1253)
Q Consensus 512 g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~ 591 (1253)
|.+||||||||||||||++|||+||||||+|||||.++|+.+|++|++.+.|||+|+|||||+|+++||.|+|+++|+|+
T Consensus 1124 G~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~Vv 1203 (1228)
T KOG0055|consen 1124 GVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVV 1203 (1228)
T ss_pred cCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCcchhhhcCchHHHHHHhhh
Q 000851 592 ESGTHVDLISKGGEYAALVNLQS 614 (1253)
Q Consensus 592 ~~g~~~~l~~~~~~y~~~~~~~~ 614 (1253)
|+|||++|++++|.|++|+..|.
T Consensus 1204 E~GtH~~L~~~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1204 EQGTHDELLAKRGIYFRLVQLQS 1226 (1228)
T ss_pred ecccHHHHHhCCCchHHHhhhcc
Confidence 99999999999999999998764
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.7e-95 Score=893.02 Aligned_cols=570 Identities=32% Similarity=0.463 Sum_probs=520.9
Q ss_pred chHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 000851 34 SGSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAW 113 (1253)
Q Consensus 34 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1253)
+..+.+++..+.++++.+ .-.++.+++..+.....|++++.++|.+.... ..+.+...++.++++++...++.+
T Consensus 139 ~~~~~~f~~~~~~~~~~l-~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~-----~~~tL~vl~ig~~~~~l~~~~l~~ 212 (709)
T COG2274 139 PFGLSWFIPLLFKYRRLL-FEVLLASLLLQLLALATPLFSQIVIDKVLPDA-----SRSTLTVLAIGLLLAALFEALLRL 212 (709)
T ss_pred ccchHhHHHHHHhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-----chhHHHHHHHHHHHHHHHHHHHHH
Confidence 344566666666665443 33344445555555555667899999876432 123444555666677777888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 114 IGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFT 193 (1253)
Q Consensus 114 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1253)
++.++..+++.|+..++-.++|+|++++|+.||++ +++|++++|+. |.++|+++++..+...+.++..+++.+++|++
T Consensus 213 lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~-r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ 290 (709)
T COG2274 213 LRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEK-RSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFL 290 (709)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccC-CChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997 59999999996 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000851 194 SVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGK 273 (1253)
Q Consensus 194 ~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~ 273 (1253)
++|.|++++++.+|++++...++.+.+++..++..+..++.++.+.|+++|+++||+.+.|.++..+|++...+..+.+.
T Consensus 291 ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~ 370 (709)
T COG2274 291 YSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGF 370 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 274 KSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISII 353 (1253)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l 353 (1253)
+..........+..++..+..++++|+|+++|.+|++|+|+++++.+.......|+.++...+..++++..+.+|+.+++
T Consensus 371 ~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil 450 (709)
T COG2274 371 KTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDIL 450 (709)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988777788899999999999999999999999999
Q ss_pred hccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCc
Q 000851 354 KENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSG 433 (1253)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 433 (1253)
+.++|.+ . +......++..|+|+|+||+|+|+.++.++|+|+||+|+|||++||||+||||||||+|+|+|+|+|++|
T Consensus 451 ~~~~E~~-~-~~~~~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G 528 (709)
T COG2274 451 DTPPEQE-G-DKTLIHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQG 528 (709)
T ss_pred cCCcccc-c-ccccccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 9988754 1 1112345667899999999999987655699999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCC
Q 000851 434 KILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGT 513 (1253)
Q Consensus 434 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~ 513 (1253)
+|++||.|+.++++.++|++||||+||+.||+|||+|||+++.|++++|++.+||+.+++|+||.++|.||+|.+||+|.
T Consensus 529 ~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~ 608 (709)
T COG2274 529 RILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGA 608 (709)
T ss_pred eEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000851 514 QLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVES 593 (1253)
Q Consensus 514 ~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~ 593 (1253)
+|||||||||+|||||++||+||||||||||||++||+.|.+.|.++.+|+|+|+||||++++++||||+||++|+|+++
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~ 688 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQ 688 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCcchhhhcCchHHHHHHhh
Q 000851 594 GTHVDLISKGGEYAALVNLQ 613 (1253)
Q Consensus 594 g~~~~l~~~~~~y~~~~~~~ 613 (1253)
|+|+||++.+|.|+++|..|
T Consensus 689 gs~~ell~~~g~y~~l~~~q 708 (709)
T COG2274 689 GSHEELLAQGGLYARLYQQQ 708 (709)
T ss_pred CCHHHHHHhcChHHHHHhcc
Confidence 99999999999999998765
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=7e-93 Score=872.81 Aligned_cols=565 Identities=32% Similarity=0.512 Sum_probs=513.3
Q ss_pred hHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 668 SIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYF 747 (1253)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 747 (1253)
+++..+...+.....+++..++..+.++..|++...+. +..... ............++++++...++.+++.++
T Consensus 144 ~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~vi---D~Vl~~---~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~ 217 (709)
T COG2274 144 WFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVI---DKVLPD---ASRSTLTVLAIGLLLAALFEALLRLLRTYL 217 (709)
T ss_pred hHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhhhcc---CchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444443444444455555555566666666544333 222211 112334455666777788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000851 748 YTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWR 827 (1253)
Q Consensus 748 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 827 (1253)
....+.++...+-..+|+|++++|++||.. +++|++++|+ +|++.++++++......+.++.+.++.++++++++|+
T Consensus 218 ~~~~~~rld~~l~~~~~~hll~Lpl~~f~~--r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~ 294 (709)
T COG2274 218 IAHLGKRLDLELSGRFFRHLLRLPLSYFEK--RSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWK 294 (709)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcCcHHHccC--CChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999974 7999999998 5999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHH
Q 000851 828 LAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGH 907 (1253)
Q Consensus 828 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 907 (1253)
+++++++.+|++++..++..+.+++..++..+..++..+++.|++.|++|||+.+.|.++..+|.+.+.+..+..++..+
T Consensus 295 L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~ 374 (709)
T COG2274 295 LTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEK 374 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000851 908 ISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKT 987 (1253)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~ 987 (1253)
...+...+.+++..+..++++|+|+.+|..+++|+|.++++.+....+..++..+.+.+.++.....+.+|+.++++.++
T Consensus 375 ~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~ 454 (709)
T COG2274 375 LALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPP 454 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred cCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEE
Q 000851 988 AIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLI 1067 (1253)
Q Consensus 988 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~i 1067 (1253)
+.+.+.. ....++..|+|+|+||+|+|+.+ ++++|+|+||+|+|||+|||||+||||||||+|+|+|+|+|++|+|++
T Consensus 455 E~~~~~~-~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~ 532 (709)
T COG2274 455 EQEGDKT-LIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILL 532 (709)
T ss_pred ccccccc-cccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 7554332 12345678999999999999854 347999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000851 1068 DGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 1147 (1253)
Q Consensus 1068 dG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSg 1147 (1253)
||+|++++++.++|++|||||||++||+|||||||++++|+.++||+++||+.|++|+||.++|.||||+|||+|.+|||
T Consensus 533 dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSG 612 (709)
T COG2274 533 DGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSG 612 (709)
T ss_pred CCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChh
Q 000851 1148 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHE 1227 (1253)
Q Consensus 1148 GQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~ 1227 (1253)
||||||+|||||++||+||||||||||||++||+.|.+.|.+..++||+|+||||++++++||||+|||+|||+|+|+|+
T Consensus 613 GQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ 692 (709)
T COG2274 613 GQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHE 692 (709)
T ss_pred HHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccchHHHHHHHh
Q 000851 1228 QLLRKENGIYKQLIRLQ 1244 (1253)
Q Consensus 1228 eLl~~~~g~y~~L~~~~ 1244 (1253)
||++. +|.|+++|+.|
T Consensus 693 ell~~-~g~y~~l~~~q 708 (709)
T COG2274 693 ELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred HHHHh-cChHHHHHhcc
Confidence 99994 99999999866
No 14
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-89 Score=860.55 Aligned_cols=570 Identities=22% Similarity=0.284 Sum_probs=493.7
Q ss_pred hHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 35 GSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWI 114 (1253)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1253)
..+++++++.+++++ .+++++++.++.+++.+..|++++.++|.+.....+ ...+..+...++++.++..++.++
T Consensus 8 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 82 (588)
T PRK11174 8 ELTRWLKQQSKPAKR-WLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP----REALLPPFILLILLFVLRALLAWL 82 (588)
T ss_pred hhhHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 346788899988755 456777888888888888999999999976421101 111222233344445556777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 115 GVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTS 194 (1253)
Q Consensus 115 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1253)
..++..+.+.++..++|.++|+|++++|+++|++ .++|++++|+++|++.+++++.+.+..++..++.+++++++++++
T Consensus 83 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~-~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 161 (588)
T PRK11174 83 RERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQG-KPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPI 161 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhcc-CCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999997 589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 195 VWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKK 274 (1253)
Q Consensus 195 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 274 (1253)
+|++++++++++|+++++...+.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|++..++..+...+
T Consensus 162 ~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 241 (588)
T PRK11174 162 NWAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTME 241 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHH------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 275 SGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKA------FT---TIINVIFSGFALGQAAPNLAAIAKGKAA 345 (1253)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~------~~---~~~~~~~~~~~l~~l~~~~~~~~~~~~a 345 (1253)
..+..+...++..++..+..+++++++++.+. |.+|+|++ +. ++.+......|+..+...+..++++.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~ 320 (588)
T PRK11174 242 VLRMAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGA 320 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777777776666666666566566666554 88888864 11 1122233456888999999999999999
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHH
Q 000851 346 AANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQ 425 (1253)
Q Consensus 346 ~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~ 425 (1253)
++|+.++++.+++.+ . ...........+.|+|+||+|.|+++ +++|+|+||+|+|||++|||||||||||||+++|+
T Consensus 321 ~~ri~~~l~~~~~~~-~-~~~~~~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~ 397 (588)
T PRK11174 321 AESLVTFLETPLAHP-Q-QGEKELASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALL 397 (588)
T ss_pred HHHHHHHHcCCCccc-C-CCccccCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 999999998765322 1 11101111123579999999877543 45999999999999999999999999999999999
Q ss_pred ccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCcc
Q 000851 426 RLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQ 505 (1253)
Q Consensus 426 ~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~ 505 (1253)
|+| |++|+|++||+|+++++.+++|++|+||+|||+||++||+|||++|+|+++++++++||+.+++++|++++|+|||
T Consensus 398 g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~d 476 (588)
T PRK11174 398 GFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLD 476 (588)
T ss_pred cCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccc
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEE
Q 000851 506 TQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVL 585 (1253)
Q Consensus 506 t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl 585 (1253)
|.+||+|.+|||||||||+||||+++||+|||||||||+||+++|+.|++.|+++.+++|+|+||||++++++||+|+||
T Consensus 477 T~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl 556 (588)
T PRK11174 477 TPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVM 556 (588)
T ss_pred cccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred eCCEEEEeeCcchhhhcCchHHHHHHhhhc
Q 000851 586 KNGQVVESGTHVDLISKGGEYAALVNLQSS 615 (1253)
Q Consensus 586 ~~G~i~~~g~~~~l~~~~~~y~~~~~~~~~ 615 (1253)
++|+|+|+|+|+||++++|.|++++..|..
T Consensus 557 ~~G~i~e~G~~~eL~~~~~~y~~l~~~q~~ 586 (588)
T PRK11174 557 QDGQIVQQGDYAELSQAGGLFATLLAHRQE 586 (588)
T ss_pred eCCeEeecCCHHHHHhcchHHHHHHHHhhc
Confidence 999999999999999999999999987654
No 15
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=8.4e-89 Score=906.72 Aligned_cols=569 Identities=29% Similarity=0.478 Sum_probs=493.4
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000851 36 SFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIG 115 (1253)
Q Consensus 36 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1253)
.+.+++++.+++++ .++++++++++.+++.|.+|++++.++|.+.... ........+++++++++++.+++.+++
T Consensus 812 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~l~~~~~~i~~~~~~~l~ 886 (1466)
T PTZ00265 812 NLRIVYREIFSYKK-DVTIIALSILVAGGLYPVFALLYAKYVSTLFDFA----NLEANSNKYSLYILVIAIAMFISETLK 886 (1466)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777766654 3677788888999999999999999999764211 111123345566677777788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhc-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 116 VAFWMQTGERQTARLRLKYLQSVLKKDMSFFDT-EARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTS 194 (1253)
Q Consensus 116 ~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~-~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1253)
.++..++++++..++|.++|++++++|++|||+ ++++|++++|+++|++.+++++...+..++..++.+++++++++++
T Consensus 887 ~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~ 966 (1466)
T PTZ00265 887 NYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYF 966 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999985 3479999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHHHHHHHhhHHHHHHHhhHHH
Q 000851 195 VWQLTLLTLAVVPLIAVAGGAYTITMSTLS-EK-----------------GEAAYGEAGKVAEEIISQVRAVYAFVGEAK 256 (1253)
Q Consensus 195 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~ 256 (1253)
+|.+++++++++|++ ...+.++.+... ++ .++..++.+..++|.++|+++||+|+.|++
T Consensus 967 ~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~ 1043 (1466)
T PTZ00265 967 CPIVAAVLTGTYFIF---MRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDY 1043 (1466)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHH
Confidence 999988766444333 333443332211 11 234467788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 257 AIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNL 336 (1253)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~ 336 (1253)
+.++|.+..+...+...+.....++..++..++.++..++++|+|++++.+|.+|+|++++++.+++....++..+...+
T Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~ 1123 (1466)
T PTZ00265 1044 FCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLK 1123 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888889999999998888889999999999999999999999988766665555678888899
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC---CCCCCCcEEEEEEEEECCCCC-CcccccceEEEeCCCEEEEEcC
Q 000851 337 AAIAKGKAAAANIISIIKENSHSSERPGDDGIT---LPKLAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGP 412 (1253)
Q Consensus 337 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~---~~~~~~~i~~~~v~f~y~~~~-~~~l~~i~~~i~~g~~~~ivG~ 412 (1253)
..++++.++++|++++++.+++.+.. ...+.. ++...|.|+|+||+|+||+++ .++|+|+||+|+||+++|||||
T Consensus 1124 ~~~~~a~~a~~ri~~ll~~~~~~~~~-~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~ 1202 (1466)
T PTZ00265 1124 GDSENAKLSFEKYYPLIIRKSNIDVR-DNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGE 1202 (1466)
T ss_pred HHHHHHHHHHHHHHHHHCCCCcCCCC-CCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECC
Confidence 99999999999999999876643211 111111 123457899999999998654 3599999999999999999999
Q ss_pred CCCcHHHHHHHHHccCCC------------------------------------------------------CCcEEEEC
Q 000851 413 SGSGKSTIISMVQRLYEP------------------------------------------------------TSGKILLD 438 (1253)
Q Consensus 413 sGsGKSTl~~ll~~~~~~------------------------------------------------------~~G~i~~~ 438 (1253)
||||||||+++|+|+|+| ++|+|++|
T Consensus 1203 SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~id 1282 (1466)
T PTZ00265 1203 TGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLD 1282 (1466)
T ss_pred CCCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEEC
Confidence 999999999999999999 69999999
Q ss_pred CeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChH
Q 000851 439 GHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGG 518 (1253)
Q Consensus 439 g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgG 518 (1253)
|+|+++++.+++|++||||+|||+||++||+|||+||+|+++++++++||+.+++++||.+||+||||.|||+|.+||||
T Consensus 1283 G~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGG 1362 (1466)
T PTZ00265 1283 GVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGG 1362 (1466)
T ss_pred CEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhhcCEEEEEeC----CEEE-
Q 000851 519 QKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKN----GQVV- 591 (1253)
Q Consensus 519 q~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~----G~i~- 591 (1253)
|||||||||||+++|+||||||||||||+++|+.|+++|+++. +++|+|+||||++++++||+|+||++ |+++
T Consensus 1363 QkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~ 1442 (1466)
T PTZ00265 1363 QKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQ 1442 (1466)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEE
Confidence 9999999999999999999999999999999999999999984 68999999999999999999999999 9955
Q ss_pred EeeCcchhhh-cCchHHHHHHhh
Q 000851 592 ESGTHVDLIS-KGGEYAALVNLQ 613 (1253)
Q Consensus 592 ~~g~~~~l~~-~~~~y~~~~~~~ 613 (1253)
|+|+|+||++ ++|.|++++..|
T Consensus 1443 e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1443 AHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred EecCHHHHHhcCCChHHHHHhhc
Confidence 8999999998 599999998765
No 16
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.4e-88 Score=843.75 Aligned_cols=562 Identities=35% Similarity=0.551 Sum_probs=507.4
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 37 FLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGV 116 (1253)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1253)
+++++++.+ ++ .+.++.++.++..+.....|++++.++|.+... .........+++++.++..++.++..
T Consensus 4 ~~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~ 73 (567)
T COG1132 4 LRRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD-------LGELLELLLLLLLLALLGGVLRALQS 73 (567)
T ss_pred HHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666655 34 566677777777788888888999999986511 12223333444455556677778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 117 AFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVW 196 (1253)
Q Consensus 117 ~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1253)
++..+.+.++..++|.++|++++++|+++|++ .++|++++|+++|++.++..+.+....+...+..+++.+++++..+|
T Consensus 74 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~-~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (567)
T COG1132 74 YLGSRLGQKIVADLRRDLFEKLLRLPLSFFDK-AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSW 152 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHhCc-CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhH
Confidence 88888889999999999999999999999998 58999999999999999999998866666678889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 197 QLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSG 276 (1253)
Q Consensus 197 ~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~ 276 (1253)
++++++++..|++.++..++.++.++..++.++..++.++.+.|.++|+++||+|+.++.+.++|++..++..+...+..
T Consensus 153 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (567)
T COG1132 153 RLALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRAS 232 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000851 277 VAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKEN 356 (1253)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~ 356 (1253)
...+...++..++..+..++++++|++++..|.+++|.+++++.+......|+..+...+..++++..+++|++++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~ 312 (567)
T COG1132 233 RLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEE 312 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888888889999999999999999999999999999999988888888899999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEE
Q 000851 357 SHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKIL 436 (1253)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 436 (1253)
++..+. +.. .....++|+|+||+|+|++ ++++|+|+||+++|||++||||||||||||++++|+|+|+|++|+|+
T Consensus 313 ~~~~~~--~~~--~~~~~~~I~f~~vsf~y~~-~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~ 387 (567)
T COG1132 313 PEVEDP--PDP--LKDTIGSIEFENVSFSYPG-KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEIL 387 (567)
T ss_pred ccccCC--CCC--CCCCCCeEEEEEEEEEcCC-CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEE
Confidence 654311 111 2234578999999999984 23599999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCC
Q 000851 437 LDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLS 516 (1253)
Q Consensus 437 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 516 (1253)
+||+|+++++.+++|++|++|||||+||++||+|||.+|+|++++|++++||+.++++|||+++|+||||.+||+|.+||
T Consensus 388 idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LS 467 (567)
T COG1132 388 IDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLS 467 (567)
T ss_pred ECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCc
Q 000851 517 GGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTH 596 (1253)
Q Consensus 517 gGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 596 (1253)
|||||||+||||+++||||||||||||+||++||+.+++++.++.++||+|+||||++++++||+|+||++|+|+|.|+|
T Consensus 468 gGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h 547 (567)
T COG1132 468 GGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTH 547 (567)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred chhhhcCchHHHHHHhhh
Q 000851 597 VDLISKGGEYAALVNLQS 614 (1253)
Q Consensus 597 ~~l~~~~~~y~~~~~~~~ 614 (1253)
+||++++|.|+++|..|.
T Consensus 548 ~eLl~~~g~y~~l~~~~~ 565 (567)
T COG1132 548 EELLAKGGLYARLYQAQG 565 (567)
T ss_pred HHHHHcCCHHHHHHHHhh
Confidence 999999999999998764
No 17
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=4.4e-87 Score=848.32 Aligned_cols=564 Identities=34% Similarity=0.502 Sum_probs=502.8
Q ss_pred chHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 000851 34 SGSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAW 113 (1253)
Q Consensus 34 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1253)
...+++++++.+++++ .+++++++.++.+++....|++++.++|.+.... + ...+.....+++++.++..++.+
T Consensus 146 ~~~~~~l~~~~~~~~~-~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~ 219 (711)
T TIGR00958 146 ADLLFRLLGLSGRDWP-WLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDK-G----PPALASAIFFMCLLSIASSVSAG 219 (711)
T ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-C----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888898887644 4566777777888888888999999999875321 1 11222222334444455667778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 114 IGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFT 193 (1253)
Q Consensus 114 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1253)
++.+++.+.+.++..++|.++|++++++|++||++ .++|++++|+++|++.+++.+...+..++.++..+++.++++++
T Consensus 220 l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~-~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~ 298 (711)
T TIGR00958 220 LRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDE-NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLW 298 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999998 59999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000851 194 SVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGK 273 (1253)
Q Consensus 194 ~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~ 273 (1253)
++|.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...
T Consensus 299 ~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 378 (711)
T TIGR00958 299 LSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNK 378 (711)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 274 KSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISII 353 (1253)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l 353 (1253)
+.....+....+..++..+..++++++|++++.+|.+|+|++++++.+......|+..+...+..++++.++.+|+++++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l 458 (711)
T TIGR00958 379 RKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYL 458 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88777776666666777777788889999999999999999999988888888999999999999999999999999999
Q ss_pred hccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCC
Q 000851 354 KENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS 432 (1253)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 432 (1253)
+.+++.+ . .....+.+..+.|+|+||+|+||+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++
T Consensus 459 ~~~~~~~-~--~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~ 535 (711)
T TIGR00958 459 DRKPNIP-L--TGTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTG 535 (711)
T ss_pred CCCCCCC-C--CCCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCC
Confidence 8766533 1 11111223456899999999998653 459999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCC
Q 000851 433 GKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGG 512 (1253)
Q Consensus 433 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g 512 (1253)
|+|++||+|+++++.+++|++|+||+|||++|++||+|||.+|.++.+++++.++++.++++++++++|+||||.+||+|
T Consensus 536 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 615 (711)
T TIGR00958 536 GQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKG 615 (711)
T ss_pred CEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCC
Confidence 99999999999999999999999999999999999999999999989999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000851 513 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVE 592 (1253)
Q Consensus 513 ~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~ 592 (1253)
.+|||||||||+||||++++|+|||||||||+||+++|+.+++ ....+++|+|+||||+++++.||+|+||++|+|+|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive 693 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVE 693 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998 33357899999999999999999999999999999
Q ss_pred eeCcchhhhcCchHHHH
Q 000851 593 SGTHVDLISKGGEYAAL 609 (1253)
Q Consensus 593 ~g~~~~l~~~~~~y~~~ 609 (1253)
+|+|+||++++|.|+++
T Consensus 694 ~Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 694 MGTHKQLMEDQGCYKHL 710 (711)
T ss_pred eeCHHHHHhCCCchHhc
Confidence 99999999999999875
No 18
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6e-86 Score=820.29 Aligned_cols=567 Identities=22% Similarity=0.281 Sum_probs=494.8
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 37 FLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGV 116 (1253)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1253)
+++++++.+++++ .+++++++.++..++....|++++.++|...............+. ....+++++++..++.++..
T Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 81 (574)
T PRK11160 4 LLPFLKLYKRHWF-MLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYML-PAAGVRGAAIGRTAGRYGER 81 (574)
T ss_pred hHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHh-HHHHHHHHHHHHHHHHHHHH
Confidence 4567777777654 455677777777777777888999999975311100000001111 12223344456677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 117 AFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVW 196 (1253)
Q Consensus 117 ~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1253)
++..+.++++..++|.++|+|++++|+.+|++ .++|++++|+++|++.+++++.+.++.++..++.++++++++++++|
T Consensus 82 ~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~-~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (574)
T PRK11160 82 LVSHDATFRVLTHLRVFTFSKLLPLSPAGLAR-YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDL 160 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChHhhcc-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 59999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000851 197 QLTLLTLAVVPLIAVA-GGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKS 275 (1253)
Q Consensus 197 ~l~l~~l~~~pl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~ 275 (1253)
++++++++.+|++.++ ..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+.
T Consensus 161 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (574)
T PRK11160 161 TLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQ 240 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888876654 466778888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 276 GVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFS-GFALGQAAPNLAAIAKGKAAAANIISIIK 354 (1253)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~-~~~l~~l~~~~~~~~~~~~a~~ri~~~l~ 354 (1253)
.+..+...++..++..+..++++++|+++ .+|.+++|.+++++.+.... ..++..+...+..++++.++++|+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~ 319 (574)
T PRK11160 241 ANLTGLSQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITE 319 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99988888888888888888889999998 48999999988876655433 45677777888999999999999999998
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcE
Q 000851 355 ENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGK 434 (1253)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 434 (1253)
.+++.+++ .. .......+.|+|+||+|+|++.++++|+|+||+++|||++|||||||||||||+++|+|+|+|++|+
T Consensus 320 ~~~~~~~~-~~--~~~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~ 396 (574)
T PRK11160 320 QKPEVTFP-TT--STAAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGE 396 (574)
T ss_pred CCCCCCCC-cc--cCCCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 77653211 11 1112234679999999999764445999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCC
Q 000851 435 ILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 514 (1253)
Q Consensus 435 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 514 (1253)
|++||+|+++++.+++|++|+||+|||++|++||+|||++++|+.+++++.++++.+++++|+++ |+||||.+||+|.+
T Consensus 397 I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~ 475 (574)
T PRK11160 397 ILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQ 475 (574)
T ss_pred EEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEee
Q 000851 515 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 594 (1253)
Q Consensus 515 LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 594 (1253)
||||||||++||||++++|+|||||||||+||+++|+.+++.|.++.+++|+|+||||+++++.||+|++|++|++++.|
T Consensus 476 LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g 555 (574)
T PRK11160 476 LSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQG 555 (574)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred CcchhhhcCchHHHHHH
Q 000851 595 THVDLISKGGEYAALVN 611 (1253)
Q Consensus 595 ~~~~l~~~~~~y~~~~~ 611 (1253)
+|+||++++|.|+++|+
T Consensus 556 ~~~~l~~~~g~y~~l~~ 572 (574)
T PRK11160 556 THQELLAQQGRYYQLKQ 572 (574)
T ss_pred CHHHHHhcCcHHHHHHh
Confidence 99999999999999985
No 19
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.1e-86 Score=823.81 Aligned_cols=554 Identities=36% Similarity=0.562 Sum_probs=495.2
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 679 EWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTAR 758 (1253)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (1253)
.+ .+.++.++..+........+..+..+++... . .......+...++++.++..++.++..++..+.+.+...+
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 86 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALL-A----DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVAD 86 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55 5666666666665555556666666666554 1 1122334455555666677778888888888888999999
Q ss_pred HHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000851 759 VRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPL 838 (1253)
Q Consensus 759 lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl 838 (1253)
+|.++++++++.|++||+. +++|++++|+++|++.++..+......+...++..++.+++++..+|.++++++...|+
T Consensus 87 lr~~~~~~l~~~~~~~~~~--~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~ 164 (567)
T COG1132 87 LRRDLFEKLLRLPLSFFDK--AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPL 164 (567)
T ss_pred HHHHHHHHHHhCCHHHhCc--CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999999999999999985 67999999999999999999999866666678888899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000851 839 LIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQL 918 (1253)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (1253)
+.+......+..++..+..++...+..+.+.|.++|+++||+|+.++...+++.+..+...+...+.....+...++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (567)
T COG1132 165 LALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLL 244 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888888776688888888899999999999999999999999999999999999999999888888888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcc
Q 000851 919 LSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKE 998 (1253)
Q Consensus 919 ~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~ 998 (1253)
+..+..++.+++|..++..+.++.|.+..++.+......++..+......+..+..+.+|++++++.++........
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--- 321 (567)
T COG1132 245 LSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP--- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999875543222111
Q ss_pred cccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH
Q 000851 999 VTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR 1078 (1253)
Q Consensus 999 ~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~ 1078 (1253)
.....+.|+|+||+|+|++ ++++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|++||+||++++.+
T Consensus 322 ~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~ 399 (567)
T COG1132 322 LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLD 399 (567)
T ss_pred CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHH
Confidence 2234567999999999973 45799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1079 SLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1079 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
+||++|++|||||+||++||+|||.+|+|+++|||+++|++.|+++|||+++|+||||.|||+|.+||||||||||||||
T Consensus 400 ~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARa 479 (567)
T COG1132 400 SLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARA 479 (567)
T ss_pred HHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHH
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYK 1238 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~ 1238 (1253)
++++|+|||||||||+||++||+.|++++++..++||+|+||||++++++||+|+|||+|+|+|+|+|+||++ .+|.|+
T Consensus 480 ll~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~-~~g~y~ 558 (567)
T COG1132 480 LLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLA-KGGLYA 558 (567)
T ss_pred HhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHH-cCCHHH
Confidence 9999999999999999999999999999998888999999999999999999999999999999999999999 599999
Q ss_pred HHHHHhhc
Q 000851 1239 QLIRLQQD 1246 (1253)
Q Consensus 1239 ~L~~~~~~ 1246 (1253)
+||+.|..
T Consensus 559 ~l~~~~~~ 566 (567)
T COG1132 559 RLYQAQGG 566 (567)
T ss_pred HHHHHhhc
Confidence 99998853
No 20
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7e-86 Score=838.80 Aligned_cols=563 Identities=25% Similarity=0.308 Sum_probs=500.4
Q ss_pred HHHHHHHh-hchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 36 SFLSLFAA-ADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWI 114 (1253)
Q Consensus 36 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1253)
.+++++++ ++++++ .++..++++++..++....|++++.++|.+.... + ...+...++.++++.++..++.++
T Consensus 122 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~-~----~~~l~~~~~~~~~~~~~~~~~~~~ 195 (686)
T TIGR03797 122 GLRDLLRFALRGARR-DLLAILAMGLLGTLLGMLVPIATGILIGTAIPDA-D----RSLLVQIALALLAAAVGAAAFQLA 195 (686)
T ss_pred cHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-C----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666665 444433 3455566666677777777888999999875321 1 122333333444455556778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 115 GVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTS 194 (1253)
Q Consensus 115 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1253)
+.++..+.+.++..++|.++|+|++++|+.||++ .++|++++|++ |++.+++.+...+...+.+....++.+++++++
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~-~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 273 (686)
T TIGR03797 196 QSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQ-YSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYY 273 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCC-CChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999998 59999999997 899999999988888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 195 VWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKK 274 (1253)
Q Consensus 195 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 274 (1253)
+|.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+++.|+.+.++|++..++..+...+
T Consensus 274 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 353 (686)
T TIGR03797 274 SWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELS 353 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 275 SGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIK 354 (1253)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~ 354 (1253)
..........+..++..+..++++|+|++++.+|.+|+|.++++..+......|+.++...+..++++..+.+|+.++++
T Consensus 354 ~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 433 (686)
T TIGR03797 354 AQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILE 433 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 98888888888888888888899999999999999999999998888888888999999999999999999999999998
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcE
Q 000851 355 ENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGK 434 (1253)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 434 (1253)
.+++.+ . . ........+.|+|+||+|+|++.++++|+|+||+|+|||++|||||||||||||+|+|+|+|+|++|+
T Consensus 434 ~~~e~~-~--~-~~~~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~ 509 (686)
T TIGR03797 434 ALPEVD-E--A-KTDPGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGS 509 (686)
T ss_pred CCcccc-c--C-cCCCCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCE
Confidence 765432 1 1 11122345689999999999754456999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCC
Q 000851 435 ILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 514 (1253)
Q Consensus 435 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 514 (1253)
|++||+|+++++.+++|++||||+|||++|++||+|||.+|+| +++++++++|+.++++++++++|+||||.+||+|.+
T Consensus 510 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~ 588 (686)
T TIGR03797 510 VFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGT 588 (686)
T ss_pred EEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCC
Confidence 9999999999999999999999999999999999999999998 899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEee
Q 000851 515 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 594 (1253)
Q Consensus 515 LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 594 (1253)
|||||||||+||||++++|+|||||||||+||+++|+.+.+.|+++ ++|+|+||||+++++.||+|+||++|+|++.|
T Consensus 589 LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G 666 (686)
T TIGR03797 589 LSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQG 666 (686)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEEC
Confidence 9999999999999999999999999999999999999999999887 68999999999999999999999999999999
Q ss_pred CcchhhhcCchHHHHHHhh
Q 000851 595 THVDLISKGGEYAALVNLQ 613 (1253)
Q Consensus 595 ~~~~l~~~~~~y~~~~~~~ 613 (1253)
+|+||++++|.|++++..|
T Consensus 667 ~~~~Ll~~~~~y~~l~~~q 685 (686)
T TIGR03797 667 TYDELMAREGLFAQLARRQ 685 (686)
T ss_pred CHHHHHhCCcHHHHHHHhc
Confidence 9999999999999998754
No 21
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-85 Score=824.44 Aligned_cols=568 Identities=21% Similarity=0.295 Sum_probs=484.2
Q ss_pred HHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 669 IWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFY 748 (1253)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 748 (1253)
+.+++++.+++++.+++++++.++..+.....++.+..+++....+..+ . .....+..+++++.++..++.+++.++.
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP-R-EALLPPFILLILLFVLRALLAWLRERVG 87 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-h-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446666777888888888888888877777788888877765421111 1 1122334445555666777888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000851 749 TLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRL 828 (1253)
Q Consensus 749 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 828 (1253)
...+.++..++|.++|++++++|.+||+ ++++|++++|+++|++.+++.+...+..++.+++.+++++++++.++|++
T Consensus 88 ~~~~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 165 (588)
T PRK11174 88 FKAGQHIRQQIRQQVLDKLQQLGPAWIQ--GKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAA 165 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhc--cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997 47899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000851 829 AAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHI 908 (1253)
Q Consensus 829 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 908 (1253)
++++++++|++++......+..++..++.++...+..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+..+.
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (588)
T PRK11174 166 GLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRM 245 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888777777777777888888899999999999999999999999999999999999999888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 909 SGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDI---------MKSFMVLIITALAVAETLALAPDIVKGSQALGPV 979 (1253)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i 979 (1253)
......+..++..+..++..++++..+ .|.+++|.+ +.++.+......++..+...+..+..+..+.+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri 324 (588)
T PRK11174 246 AFLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESL 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776666666666555555555554443 377777754 1111233345567888888889999999999999
Q ss_pred HHHhcccccCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC
Q 000851 980 FGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD 1059 (1253)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~ 1059 (1253)
.++++.+++.++... ...+.+..+.|+|+||+|.|++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|
T Consensus 325 ~~~l~~~~~~~~~~~-~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~- 400 (588)
T PRK11174 325 VTFLETPLAHPQQGE-KELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL- 400 (588)
T ss_pred HHHHcCCCcccCCCc-cccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-
Confidence 999876543221111 0011112357999999998863 457999999999999999999999999999999999999
Q ss_pred CCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCcccccc
Q 000851 1060 PISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVG 1139 (1253)
Q Consensus 1060 p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vg 1139 (1253)
|++|+|++||+|+++++.+++|++|+||||||+||+|||||||.+|+|+++|+|+++|++.|++++||+++|+||||.+|
T Consensus 401 p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vg 480 (588)
T PRK11174 401 PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIG 480 (588)
T ss_pred CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCE
Q 000851 1140 DRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGK 1219 (1253)
Q Consensus 1140 e~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ 1219 (1253)
|+|.+|||||||||||||||+++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++++||+|+||++|+
T Consensus 481 e~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 481 DQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQ 560 (588)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred EEEecChhHHhhcccchHHHHHHHhhc
Q 000851 1220 VAEIGSHEQLLRKENGIYKQLIRLQQD 1246 (1253)
Q Consensus 1220 ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1246 (1253)
++|.|+|+||++ ++|.|+++++.|.+
T Consensus 561 i~e~G~~~eL~~-~~~~y~~l~~~q~~ 586 (588)
T PRK11174 561 IVQQGDYAELSQ-AGGLFATLLAHRQE 586 (588)
T ss_pred EeecCCHHHHHh-cchHHHHHHHHhhc
Confidence 999999999998 58999999988754
No 22
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.9e-85 Score=837.78 Aligned_cols=565 Identities=25% Similarity=0.369 Sum_probs=501.5
Q ss_pred hHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 35 GSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWI 114 (1253)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1253)
..+++++++.+++++. ++..++++++..++....|++++.++|.+.... ....+...+..++++.++..++.++
T Consensus 142 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~ 215 (708)
T TIGR01193 142 NSLLKFIPLITRQKKL-IVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHK-----MMGTLGIISIGLIIAYIIQQILSYI 215 (708)
T ss_pred chHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-----ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888776544 445566666666777777888999999865321 1122222333344444556678888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 115 GVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTS 194 (1253)
Q Consensus 115 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1253)
+.++..+.+.++..++|.++|+|++++|+.||++ .++|++++|++ |++.+++++...+..++.++..+++.+++++++
T Consensus 216 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~-~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 293 (708)
T TIGR01193 216 QIFLLNVLGQRLSIDIILSYIKHLFELPMSFFST-RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQ 293 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999998 59999999998 999999999888888888888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 195 VWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKK 274 (1253)
Q Consensus 195 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 274 (1253)
+|++++++++.+|+++++..++.++.++..++.++..++.++.+.|.++|+++||+||.|+.+.++|++...+..+...+
T Consensus 294 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 373 (708)
T TIGR01193 294 NMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFK 373 (708)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 275 SGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIK 354 (1253)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~ 354 (1253)
.....+....+..++..+..++++|+|++++.+|.+|+|.++++..+......|+.++...+..++++..+.+|+.++++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 453 (708)
T TIGR01193 374 YQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYL 453 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888777777777777888889999999999999999999999888888888999999999999999999999999998
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcE
Q 000851 355 ENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGK 434 (1253)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 434 (1253)
.+++.+ . .......+...+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+
T Consensus 454 ~~~e~~-~-~~~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 454 VDSEFI-N-KKKRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred CCCccc-c-cccccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 765533 1 11101122345789999999999743 35999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcC-CCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCC
Q 000851 435 ILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLG-KEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGT 513 (1253)
Q Consensus 435 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g-~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~ 513 (1253)
|++||+|+++++.+++|++||||+|||+||++||+|||.+| .|++++++++++|+.++++++++++|+||||.+||+|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99999999999999999999999999999999999999999 57889999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000851 514 QLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVES 593 (1253)
Q Consensus 514 ~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~ 593 (1253)
+|||||||||+||||++++|+|||||||||+||+++|+.+.+.|+++ +++|+|+||||+++++.||+|++|++|++++.
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~ 689 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQ 689 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999985 68999999999999999999999999999999
Q ss_pred eCcchhhhcCchHHHHHH
Q 000851 594 GTHVDLISKGGEYAALVN 611 (1253)
Q Consensus 594 g~~~~l~~~~~~y~~~~~ 611 (1253)
|+|+||++++|.|+++++
T Consensus 690 G~~~~L~~~~~~y~~l~~ 707 (708)
T TIGR01193 690 GSHDELLDRNGFYASLIH 707 (708)
T ss_pred CCHHHHHhcCCcHHHHhh
Confidence 999999999999999874
No 23
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.6e-85 Score=836.19 Aligned_cols=566 Identities=25% Similarity=0.330 Sum_probs=500.3
Q ss_pred hHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 35 GSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWI 114 (1253)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1253)
..++.++++++++++. +...++++++..+.....|++++.++|.+.... + ...+......++++.++..++.++
T Consensus 140 ~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~-~----~~~l~~~~~~~~~~~~~~~~~~~~ 213 (710)
T TIGR03796 140 SLLRALWRRLRGSRGA-LLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQG-R----QDWLRPLLLGMGLTALLQGVLTWL 213 (710)
T ss_pred ccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466677777766443 344455555556666667778999999865321 1 111222333344445556778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 115 GVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTS 194 (1253)
Q Consensus 115 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1253)
+.++..+.+.++..++|.++|+|++++|+++|++ .++|++++|+++| +.+++++...+..++.++..+++.+++++++
T Consensus 214 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~-~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 291 (710)
T TIGR03796 214 QLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQ-RHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLY 291 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC-CcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999998 5999999999988 7899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 195 VWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKK 274 (1253)
Q Consensus 195 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 274 (1253)
+|.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+++.|+.+.++|.+...+..+...+
T Consensus 292 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 371 (710)
T TIGR03796 292 DPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQE 371 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 275 SGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIK 354 (1253)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~ 354 (1253)
.....+....+..++..+..++++++|++++.+|.+|+|.++++..+......|+..+...+..++++..+++|+.++++
T Consensus 372 ~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~ 451 (710)
T TIGR03796 372 LGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLR 451 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888888888888888888899999999999999999999998888888888999999999999999999999999998
Q ss_pred ccCCCCCCCCC--C-CCCC-CCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC
Q 000851 355 ENSHSSERPGD--D-GITL-PKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP 430 (1253)
Q Consensus 355 ~~~~~~~~~~~--~-~~~~-~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~ 430 (1253)
.+++.+..... . .... +...+.|+++||+|+|++.++++|+|+||+|+|||++|||||||||||||+++|+|+|+|
T Consensus 452 ~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p 531 (710)
T TIGR03796 452 NPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP 531 (710)
T ss_pred CCCccccccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 76553311000 0 0111 234578999999999986545699999999999999999999999999999999999999
Q ss_pred CCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccC
Q 000851 431 TSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGE 510 (1253)
Q Consensus 431 ~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~ 510 (1253)
++|+|++||+|+++++.+++|++||||+|||++|++||+|||.++.|++++++++++|+.+++++++.++|+||||.+||
T Consensus 532 ~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e 611 (710)
T TIGR03796 532 WSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAE 611 (710)
T ss_pred CCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceecc
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000851 511 GGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQV 590 (1253)
Q Consensus 511 ~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i 590 (1253)
+|.+|||||||||+||||++++|+|||||||||+||+++|+.+.+.|++ .++|+|+||||+++++.||+|++|++|+|
T Consensus 612 ~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i 689 (710)
T TIGR03796 612 GGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKV 689 (710)
T ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEE
Confidence 9999999999999999999999999999999999999999999999987 58999999999999999999999999999
Q ss_pred EEeeCcchhhhcCchHHHHH
Q 000851 591 VESGTHVDLISKGGEYAALV 610 (1253)
Q Consensus 591 ~~~g~~~~l~~~~~~y~~~~ 610 (1253)
++.|+|+||++++|.|++++
T Consensus 690 ~~~G~~~~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 690 VQRGTHEELWAVGGAYARLI 709 (710)
T ss_pred EEecCHHHHHHcCCcHHHHh
Confidence 99999999999999999886
No 24
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1e-84 Score=826.64 Aligned_cols=564 Identities=32% Similarity=0.508 Sum_probs=502.1
Q ss_pred hHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 668 SIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYF 747 (1253)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 747 (1253)
.+++++++.++.++++...+++.++..+.....++.+.++++........ ........+++++.++..++.+++.++
T Consensus 148 ~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~ 224 (711)
T TIGR00958 148 LLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGP---PALASAIFFMCLLSIASSVSAGLRGGS 224 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777788888888887777777777777777777777766532211 112223344445556667778888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000851 748 YTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWR 827 (1253)
Q Consensus 748 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 827 (1253)
+...+.++..++|.++|++++++|++||+. +++|++++|+++|++.+++.+...+..++.+++.+++++++++.++|.
T Consensus 225 ~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~--~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~ 302 (711)
T TIGR00958 225 FNYTMARINLRIREDLFRSLLRQDLGFFDE--NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPR 302 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999974 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHH
Q 000851 828 LAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGH 907 (1253)
Q Consensus 828 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 907 (1253)
+++++++..|+.++......+..++..++.++...+..+.+.|+++|+++||+|+.|+++.++|.+..++..+...+...
T Consensus 303 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 382 (711)
T TIGR00958 303 LTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKAL 382 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888888889999999999999999999999999999999999999998888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000851 908 ISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKT 987 (1253)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~ 987 (1253)
.......+...+..+..++.+++|++++..|.++.|+++++..+......++..+...+.++.++..+.+|+.++++.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 462 (711)
T TIGR00958 383 AYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKP 462 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 77777777777777888888999999999999999999999999999999999999999999999999999999997765
Q ss_pred cCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEE
Q 000851 988 AIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLI 1067 (1253)
Q Consensus 988 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~i 1067 (1253)
+.+.... ..+.+..+.|+|+||+|+||++++.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 463 ~~~~~~~--~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 463 NIPLTGT--LAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred CCCCCCC--CCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 4322111 11223457899999999999766678999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000851 1068 DGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 1147 (1253)
Q Consensus 1068 dG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSg 1147 (1253)
||+|+++++.+++|++|+||||||++|+|||||||.++.++.+|+++++|++.++++++++++|+||||.+||+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChh
Q 000851 1148 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHE 1227 (1253)
Q Consensus 1148 GQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~ 1227 (1253)
|||||||||||++++|+|||||||||+||+++|+.|++ ....+++|+|+||||++++..||+|+||++|+|+|+|+|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~ 698 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHK 698 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHH
Confidence 99999999999999999999999999999999999999 3345789999999999999999999999999999999999
Q ss_pred HHhhcccchHHHHH
Q 000851 1228 QLLRKENGIYKQLI 1241 (1253)
Q Consensus 1228 eLl~~~~g~y~~L~ 1241 (1253)
||++ ++|.|++|+
T Consensus 699 eL~~-~~~~y~~lv 711 (711)
T TIGR00958 699 QLME-DQGCYKHLV 711 (711)
T ss_pred HHHh-CCCchHhcC
Confidence 9998 578999874
No 25
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.1e-84 Score=826.35 Aligned_cols=557 Identities=25% Similarity=0.345 Sum_probs=495.2
Q ss_pred hHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 35 GSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWI 114 (1253)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1253)
..+++++++.+++++ .+...++++++..++....|++++.++|.+.... + ...+......++++.++..++.++
T Consensus 133 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~-~----~~~l~~~~~~~~~~~~~~~~~~~~ 206 (694)
T TIGR03375 133 RPKHWFWSTLKESWP-LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQ-A----FETLWVLAIGVALAIVFDFVLKTL 206 (694)
T ss_pred ccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-c----HhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667777776644 3445566666666777777888999999865321 1 122222333333444556678888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 115 GVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTS 194 (1253)
Q Consensus 115 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1253)
+.++..+.+.++..++|.++|+|++++|+.| ++ .++|++++|+ +|++.+++++...+...+.++..+++.+++++++
T Consensus 207 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~-~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 283 (694)
T TIGR03375 207 RSYFLDVAGKKADLILSAKLFERVLGLRMEA-RP-ASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAII 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CC-CChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 55 5899999999 7999999999988888888888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 195 VWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKK 274 (1253)
Q Consensus 195 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 274 (1253)
+|.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+
T Consensus 284 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR03375 284 GGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLK 363 (694)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 275 SGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIK 354 (1253)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~ 354 (1253)
..+..+....+..++..++.++++|+|++++.+|.+|+|++++++.+......|+..+...+..++.+..+.+|+.++++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~ 443 (694)
T TIGR03375 364 SRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQ 443 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99998888888888888888889999999999999999999999888888888999999999999999999999999998
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcE
Q 000851 355 ENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGK 434 (1253)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 434 (1253)
.+++.+ . .......+...+.|+|+||+|+|++..+++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+
T Consensus 444 ~~~e~~-~-~~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~ 521 (694)
T TIGR03375 444 LPVERP-E-GTRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGS 521 (694)
T ss_pred CCCCCC-C-CCCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 766532 1 11111122345689999999999854456999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCC
Q 000851 435 ILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 514 (1253)
Q Consensus 435 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 514 (1253)
|.+||+|+++++.+++|++|+||+|+|++|++||+|||.+++|++++++++++++.++++++++++|+||||.+||+|.+
T Consensus 522 I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~ 601 (694)
T TIGR03375 522 VLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRS 601 (694)
T ss_pred EEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEee
Q 000851 515 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 594 (1253)
Q Consensus 515 LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 594 (1253)
|||||||||+||||++++|+|||||||||+||+++|+.+++.|.++.+++|+|+||||+++++.||+|++|++|+++|+|
T Consensus 602 LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G 681 (694)
T TIGR03375 602 LSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADG 681 (694)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred Ccchhhhc
Q 000851 595 THVDLISK 602 (1253)
Q Consensus 595 ~~~~l~~~ 602 (1253)
+|+||+++
T Consensus 682 ~~~eLl~~ 689 (694)
T TIGR03375 682 PKDQVLEA 689 (694)
T ss_pred CHHHHHHH
Confidence 99999865
No 26
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=6.3e-84 Score=808.58 Aligned_cols=569 Identities=30% Similarity=0.455 Sum_probs=502.2
Q ss_pred hHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 35 GSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWI 114 (1253)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1253)
+.+++++++.+++++. +++.+++.++..+.....|++++.++|.+.... . ...+....+.+++++++..++.++
T Consensus 11 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~~ 84 (582)
T PRK11176 11 QTFRRLWPTIAPFKAG-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKA--D---RSVLKWMPLVVIGLMILRGITSFI 84 (582)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--c---hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3356677777766544 345556666666666777788898998764321 1 111222222233345556677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 115 GVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTS 194 (1253)
Q Consensus 115 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1253)
..++..+.+.++..++|.++|+++.+.|..+|++ .++|++++|+++|++.+++.+...+..++..++.+++.+++++++
T Consensus 85 ~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~-~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (582)
T PRK11176 85 SSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDK-QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYY 163 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999999999999999999987 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 195 VWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKK 274 (1253)
Q Consensus 195 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 274 (1253)
+|.+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+
T Consensus 164 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (582)
T PRK11176 164 SWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMK 243 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 275 SGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIK 354 (1253)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~ 354 (1253)
..+.......+..++..+..++++++|++.+.+|.+|+|++++++.++.....|+..+...+..++++..+.+|+.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~ 323 (582)
T PRK11176 244 MVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILD 323 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888888888888888888888999999999999999999888777777788999999999999999999999999997
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcE
Q 000851 355 ENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGK 434 (1253)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 434 (1253)
.+++.+ . .....++..+.|+++||+|+|++...++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+
T Consensus 324 ~~~~~~-~---~~~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~ 399 (582)
T PRK11176 324 LEQEKD-E---GKRVIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGE 399 (582)
T ss_pred CCCcCC-C---CCcCCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCce
Confidence 654422 1 111122334579999999999865456999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCC-CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCC
Q 000851 435 ILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKED-ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGT 513 (1253)
Q Consensus 435 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~ 513 (1253)
|++||+|+++++.+++|++|+||||||++|++||+|||.+|+++ .++++++++++.++++++++++|+|+||.+||+|.
T Consensus 400 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~ 479 (582)
T PRK11176 400 ILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGV 479 (582)
T ss_pred EEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCC
Confidence 99999999999999999999999999999999999999999765 68999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000851 514 QLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVES 593 (1253)
Q Consensus 514 ~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~ 593 (1253)
+|||||||||+||||++++|+|||||||||+||+++|+.+.+.|.++.+++|+|+||||++.++.||+|++|++|+|+|.
T Consensus 480 ~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~ 559 (582)
T PRK11176 480 LLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVER 559 (582)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred eCcchhhhcCchHHHHHHhhh
Q 000851 594 GTHVDLISKGGEYAALVNLQS 614 (1253)
Q Consensus 594 g~~~~l~~~~~~y~~~~~~~~ 614 (1253)
|+|++|+++++.|++++..|.
T Consensus 560 g~~~~l~~~~~~y~~l~~~~~ 580 (582)
T PRK11176 560 GTHAELLAQNGVYAQLHKMQF 580 (582)
T ss_pred CCHHHHHhCCChHHHHHHHHh
Confidence 999999999999999997653
No 27
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-87 Score=738.18 Aligned_cols=550 Identities=28% Similarity=0.375 Sum_probs=468.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH
Q 000851 56 SLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGL------VALVSAWIGVAFWMQTGERQTAR 129 (1253)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 129 (1253)
.++..+.-+.....|.+.++++|.+..+. .+... .....+++.+ +..+++-++.++|..+.+-..++
T Consensus 221 l~ll~i~rli~~~~pi~~k~iv~~ltap~----~~~~~---~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ 293 (790)
T KOG0056|consen 221 LFLLIIGRLINVSLPILSKWIVDELTAPD----TFQYS---LVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTRE 293 (790)
T ss_pred HHHHHHHHHHhhhhHHhHHHHHHhhcCcc----hhhHH---HHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHH
Confidence 33344444555666778899999876321 11111 1111222211 23456667788888888889999
Q ss_pred HHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 000851 130 LRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVG-FTSVWQLTLLTLAVVPL 208 (1253)
Q Consensus 130 lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~l~~l~~~pl 208 (1253)
+-..+|+|++.++++|+-+ .++|+++..++..++.+. ++...+.++...+.-+.++++.. ..++|+.++++++++.+
T Consensus 294 ie~~lfrHlh~LSlrwHL~-rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~l 371 (790)
T KOG0056|consen 294 IETELFRHLHNLSLRWHLN-RRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLL 371 (790)
T ss_pred HHHHHHHHHHhhceeeeec-ccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHH
Confidence 9999999999999999987 599999998888777776 65666666666666555555543 45799999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 209 IAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYG 288 (1253)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1253)
.+.+...+.....+..++...++.+..+...+++-|.++||-|++|+++.++|.+...++.+...|......+.+.....
T Consensus 372 Y~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~ 451 (790)
T KOG0056|consen 372 YCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNG 451 (790)
T ss_pred HhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 88777777777777788888888888899999999999999999999999999999999988888776655555555555
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCC
Q 000851 289 LLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGI 368 (1253)
Q Consensus 289 ~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~ 368 (1253)
+..++.+..-.+.+|+|..+.+|+|+++.+..|++...+|+..+...+..+|+...-+++++++++++++..+. +...
T Consensus 452 Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~--P~a~ 529 (790)
T KOG0056|consen 452 IIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDL--PGAP 529 (790)
T ss_pred hhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcC--CCCC
Confidence 55555555555667888899999999999989999999999999999999999999999999999998886522 2222
Q ss_pred CCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH
Q 000851 369 TLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK 448 (1253)
Q Consensus 369 ~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~ 448 (1253)
+....+|.|+|+||+|+|+.+ +++|+||||+++||+++|+|||||+||||++++|.||||.++|.|++||+||+.+...
T Consensus 530 pl~~~~G~i~fsnvtF~Y~p~-k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~ 608 (790)
T KOG0056|consen 530 PLKVTQGKIEFSNVTFAYDPG-KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQS 608 (790)
T ss_pred CccccCCeEEEEEeEEecCCC-CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHH
Confidence 333456899999999999753 4699999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
++|++||+||||..|||+||..||.||+|.+++||+.+|++.|++||-|..+|+||+|.|||+|-.||||||||+||||+
T Consensus 609 SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARt 688 (790)
T KOG0056|consen 609 SLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIART 688 (790)
T ss_pred HHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc-CchHH
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK-GGEYA 607 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~y~ 607 (1253)
++++|.|++|||+|||||..||+.||.+|.++..+||.|+|+||+||+-+||.|+|+++|+|+|.|+|+||+++ +|.|+
T Consensus 689 iLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya 768 (790)
T KOG0056|consen 689 ILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYA 768 (790)
T ss_pred HhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 89999
Q ss_pred HHHHhhhccc
Q 000851 608 ALVNLQSSEH 617 (1253)
Q Consensus 608 ~~~~~~~~~~ 617 (1253)
+||+.|....
T Consensus 769 ~MWq~qqa~g 778 (790)
T KOG0056|consen 769 DMWQAQQAMG 778 (790)
T ss_pred HHHHHHHhcC
Confidence 9998776543
No 28
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.8e-83 Score=740.57 Aligned_cols=552 Identities=27% Similarity=0.355 Sum_probs=491.9
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 55 GSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVAFWMQTGERQTARLRLKY 134 (1253)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l 134 (1253)
..++..+.+++.....+++..+++.+.... ....+..+...++++.++..++.+.+.....+.+.++..++|..+
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~-----~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~ 79 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQ-----LFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLV 79 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555666777777654321 122333344455555666778888888888899999999999999
Q ss_pred HHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 135 LQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGG 214 (1253)
Q Consensus 135 ~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~~~~ 214 (1253)
++|+.+++..+-.+ .++|+.++.+++.++.++.+++..++++....+..+..++.+|+++|.-++++++++|++.+++.
T Consensus 80 l~~l~~~gp~~~~~-~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMi 158 (559)
T COG4988 80 LDKLAKLGPAFIAQ-KPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMI 158 (559)
T ss_pred HHHHHhCChhhhcC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 215 AYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAW 294 (1253)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1253)
+++++.++..+++...+.++++..-|.++|+.|+|.|+..+...+++.+..++.++.+++.-+..-....+..++.+++.
T Consensus 159 lvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsi 238 (559)
T COG4988 159 LVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSI 238 (559)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998888899999999999
Q ss_pred HHHHHHHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCC
Q 000851 295 ALLLWYAGILVRH-GDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKL 373 (1253)
Q Consensus 295 ~~~~~~g~~~v~~-g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~ 373 (1253)
+++..+-+..... |.+|....+.+++..--.+.|+..+...++.-+.+.++.++++.+++.+++.. +...........
T Consensus 239 AlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~-~~~~~~~~~~~~ 317 (559)
T COG4988 239 ALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATP-GSGEKAEVANEP 317 (559)
T ss_pred HHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCC-CCccccccccCC
Confidence 9888887777777 89998776666555555678999999999999999999999999998776533 111100111112
Q ss_pred CCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000851 374 AGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQ 453 (1253)
Q Consensus 374 ~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 453 (1253)
..+++++|++|.|++++ ++++|+||++++|+.+||||+||||||||+++|+|+++|++|+|.+||+++++++.+.||++
T Consensus 318 ~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 318 PIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred CceeeecceEEecCCCC-cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhH
Confidence 23566669999999764 69999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 454 MGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 454 i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
++||+|+|++|++||||||++++|+++++++.++++.+++.+|+.. |+|+||.+||+|.+|||||+||+++|||+++++
T Consensus 397 i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~ 475 (559)
T COG4988 397 ISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPA 475 (559)
T ss_pred eeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCchHHHHHHhh
Q 000851 534 KILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQ 613 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~~~~~ 613 (1253)
+++|||||||+||.+||+.|.+.|.++.+++|+|+||||++.+++||+|+|||+|+++|+|+|++|.+++|.|++|+..|
T Consensus 476 ~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~q 555 (559)
T COG4988 476 SLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQQ 555 (559)
T ss_pred CEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hc
Q 000851 614 SS 615 (1253)
Q Consensus 614 ~~ 615 (1253)
..
T Consensus 556 ~~ 557 (559)
T COG4988 556 EG 557 (559)
T ss_pred hc
Confidence 53
No 29
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.2e-83 Score=815.94 Aligned_cols=554 Identities=27% Similarity=0.372 Sum_probs=489.0
Q ss_pred hchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 677 AAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLT 756 (1253)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 756 (1253)
++.++.+...++++++..+.....++.+..+++....... ......+.+.++++.++..++.+++.++...++.++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (686)
T TIGR03797 132 RGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD---RSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMD 208 (686)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555444444455555556554432211 1122334455556666677888899999999999999
Q ss_pred HHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000851 757 ARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASL 836 (1253)
Q Consensus 757 ~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~ 836 (1253)
.++|..+|+++++.|++||+. +++|++++|++ |++.+++.+...+...+.+++..++++++++.++|++++++++++
T Consensus 209 ~~l~~~~~~~ll~~~~~~~~~--~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 285 (686)
T TIGR03797 209 ASLQAAVWDRLLRLPVSFFRQ--YSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALA 285 (686)
T ss_pred HHHHHHHHHHHHcCCHHHHCC--CChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999974 78999999997 799999999998888888888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000851 837 PLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVS 916 (1253)
Q Consensus 837 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1253)
|+.+++.++..+..++..++..+...+..+.+.|+++|+++||+++.|+++.++|.+..++..+...+......+...+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (686)
T TIGR03797 286 LVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFN 365 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888888888888888888999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCC
Q 000851 917 QLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPAS 996 (1253)
Q Consensus 917 ~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~ 996 (1253)
.++..+..++.+|+|++++..|.++.|.++++.++......++..+...+..+..+..+.+|+.++++.+++.+...
T Consensus 366 ~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~--- 442 (686)
T TIGR03797 366 AVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK--- 442 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc---
Confidence 88888999999999999999999999999999999889999999999999999999999999999987654322111
Q ss_pred cccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC
Q 000851 997 KEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN 1076 (1253)
Q Consensus 997 ~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~ 1076 (1253)
..+.+..+.|+|+||+|+|+.. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++
T Consensus 443 ~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~ 521 (686)
T TIGR03797 443 TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLD 521 (686)
T ss_pred CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCC
Confidence 1112345689999999999743 457999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1077 LRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1077 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
++++|++|+||||||++|+|||||||.+++| .+++++++|++.++++++|+++|+||||++||+|.+|||||||||+||
T Consensus 522 ~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialA 600 (686)
T TIGR03797 522 VQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIA 600 (686)
T ss_pred HHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999988 899999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccch
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGI 1236 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~ 1236 (1253)
|||+++|+|||||||||+||++||+.|++.|++. ++|+|+||||+++++.||+|+||++|+|+|.|+|+||++ ++|.
T Consensus 601 RAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~-~~~~ 677 (686)
T TIGR03797 601 RALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMA-REGL 677 (686)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHh-CCcH
Confidence 9999999999999999999999999999999986 689999999999999999999999999999999999998 6899
Q ss_pred HHHHHHHh
Q 000851 1237 YKQLIRLQ 1244 (1253)
Q Consensus 1237 y~~L~~~~ 1244 (1253)
|++|++.|
T Consensus 678 y~~l~~~q 685 (686)
T TIGR03797 678 FAQLARRQ 685 (686)
T ss_pred HHHHHHhc
Confidence 99999865
No 30
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.5e-83 Score=814.29 Aligned_cols=568 Identities=30% Similarity=0.390 Sum_probs=505.0
Q ss_pred hHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 35 GSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWI 114 (1253)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1253)
..+++++++.+++++ .+...++++++..++....|++++.++|.+.... + ...+...++.++++.++..++.++
T Consensus 125 ~~~~~~~~~~~~~~~-~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~-~----~~~l~~l~~~~~~~~~~~~~~~~l 198 (694)
T TIGR01846 125 FGFSWFIPAIIRYRK-QFREVLLISLALQLFALVTPLLFQVVIDKVLVHR-G----LSTLSVLALAMLAVAIFEPALGGL 198 (694)
T ss_pred CcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-C----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677777766543 3445556666666666777888999999865321 1 122333333444455556778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 115 GVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTS 194 (1253)
Q Consensus 115 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1253)
+.++..+.+.++..++|.++|+|++++|+.||++ .++|++++|+ +|++.+++++...+..++.++...++.+++++++
T Consensus 199 ~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~-~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 276 (694)
T TIGR01846 199 RTYLFAHLTSRIDVELGARLYRHLLGLPLGYFES-RRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFY 276 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCC-CCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 5999999999 6999999999888888887777777778899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 195 VWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKK 274 (1253)
Q Consensus 195 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 274 (1253)
+|.+++++++.+|+++++..++.++.++..++.++..++.++.+.|.++|+++||+||.|+.+.++|++..++..+...+
T Consensus 277 ~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 356 (694)
T TIGR01846 277 SPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFR 356 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 275 SGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIK 354 (1253)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~ 354 (1253)
..+..+....+..++..+..++++|+|++++.+|.+|+|.++++..+......|+..+...+..++++..+++|+.++++
T Consensus 357 ~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 436 (694)
T TIGR01846 357 VTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILN 436 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 98888888888888888888899999999999999999999998888888888999999999999999999999999998
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcE
Q 000851 355 ENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGK 434 (1253)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 434 (1253)
.+++.+ . ......+...+.|+++||+|+|++..+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+
T Consensus 437 ~~~e~~-~--~~~~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~ 513 (694)
T TIGR01846 437 SPTEPR-S--AGLAALPELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQ 513 (694)
T ss_pred CCCCcc-C--CCCCCCCCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 765432 1 1111123345789999999999754445999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCC
Q 000851 435 ILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 514 (1253)
Q Consensus 435 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 514 (1253)
|++||+|+++++.+++|++|+||+|+|++|++||+|||.++.|+.+++++.++|+.++++++++++|+|+||.+|++|.+
T Consensus 514 I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~ 593 (694)
T TIGR01846 514 VLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGAN 593 (694)
T ss_pred EEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEee
Q 000851 515 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 594 (1253)
Q Consensus 515 LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 594 (1253)
||||||||++||||++++|+|||||||||+||+++|+.+.+.|+++.+++|+|+||||+++++.||+|++|++|+|++.|
T Consensus 594 LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g 673 (694)
T TIGR01846 594 LSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESG 673 (694)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred CcchhhhcCchHHHHHHhh
Q 000851 595 THVDLISKGGEYAALVNLQ 613 (1253)
Q Consensus 595 ~~~~l~~~~~~y~~~~~~~ 613 (1253)
+|+||++++|.|++++..|
T Consensus 674 ~~~~l~~~~~~y~~l~~~~ 692 (694)
T TIGR01846 674 RHEELLALQGLYARLWQQQ 692 (694)
T ss_pred CHHHHHHcCChHHHHHHhh
Confidence 9999999999999998754
No 31
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.9e-83 Score=739.33 Aligned_cols=552 Identities=25% Similarity=0.366 Sum_probs=493.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 686 GSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFS 765 (1253)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~ 765 (1253)
..+++.+.++....+++.++..+..++.... ......+...++++.++..++.+.+......++.++...+|.++++
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~---~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~ 81 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQL---FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLD 81 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555566666667777777777665432 2233455666677777888889999999999999999999999999
Q ss_pred HHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000851 766 AILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVA 845 (1253)
Q Consensus 766 ~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~ 845 (1253)
++.+.+..|-. ..++|+..+..+..++.++.+++..+++++...+.++..++.+++++|.-+++++++.|++.+++++
T Consensus 82 ~l~~~gp~~~~--~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMil 159 (559)
T COG4988 82 KLAKLGPAFIA--QKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMIL 159 (559)
T ss_pred HHHhCChhhhc--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999998876 4789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 846 EQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYA 925 (1253)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1253)
.....+...+++...+.+.++++.+.++|+.|+|+||..++..++..+...+.++..++..++.-....+.+++.++..+
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiA 239 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIA 239 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999998888
Q ss_pred HHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccC
Q 000851 926 LGLWYASVLIKQ-KGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKG 1004 (1253)
Q Consensus 926 ~~~~~g~~lv~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g 1004 (1253)
++..+.+..... |++++...+.++...--+..|+..+...+..-..+..+.+.++.+++.+.+..+........+....
T Consensus 240 lvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (559)
T COG4988 240 LVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPI 319 (559)
T ss_pred HHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCc
Confidence 876665555555 7899888887777777888999999999999999988889999888776554332221111122233
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++|++|+||+. +++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+.||+++
T Consensus 320 ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i 397 (559)
T COG4988 320 EISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQI 397 (559)
T ss_pred eeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHe
Confidence 46666999999853 3799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000851 1085 GLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPS 1164 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ 1164 (1253)
++|||+|+||+|||||||.+++++.+|+++++|++.+++.+|+.. |+|+||.+||+|.+|||||+||+++||||+++++
T Consensus 398 ~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~ 476 (559)
T COG4988 398 SWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPAS 476 (559)
T ss_pred eeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHHHHHh
Q 000851 1165 ILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQ 1244 (1253)
Q Consensus 1165 ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~~~~ 1244 (1253)
++|||||||+||.+||+.|++.|.++.+++|||+||||++.+++||+|+|||+||++|+|+|++|.+ ++|.|++|++.|
T Consensus 477 l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~-~~~~y~~l~~~q 555 (559)
T COG4988 477 LLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSE-KQGLYANLLKQQ 555 (559)
T ss_pred EEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhh-cCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 689999999887
Q ss_pred hc
Q 000851 1245 QD 1246 (1253)
Q Consensus 1245 ~~ 1246 (1253)
..
T Consensus 556 ~~ 557 (559)
T COG4988 556 EG 557 (559)
T ss_pred hc
Confidence 64
No 32
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=8e-83 Score=813.57 Aligned_cols=563 Identities=25% Similarity=0.390 Sum_probs=493.9
Q ss_pred HHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 669 IWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFY 748 (1253)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 748 (1253)
+.+++.+.++.++.+...++++++..+.....++.+..+++....... ......+...++++.++..++.+++.++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 144 LLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM---MGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555566666555555555555555556666666665543221 11222334444455566677888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000851 749 TLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRL 828 (1253)
Q Consensus 749 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 828 (1253)
...+.++..++|.++|+++++.|++||+. +++|++++|++ |.+.+++.+...+...+.+++..+++++++++++|++
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~~--~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 297 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFST--RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL 297 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999974 79999999998 9999999999888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000851 829 AAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHI 908 (1253)
Q Consensus 829 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 908 (1253)
++++++++|+++++.+...+..++..++..+...+..+.+.|+++|+++||++|.|+.+.++|.+..++..+...+....
T Consensus 298 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 377 (708)
T TIGR01193 298 FLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKA 377 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888889999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000851 909 SGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTA 988 (1253)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~ 988 (1253)
......+..++..+..++++|+|++++..|.+|.|+++++..+......++..+...+..+..+..+.+|+.++++.+++
T Consensus 378 ~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 457 (708)
T TIGR01193 378 DQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSE 457 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 88888888888888889999999999999999999999999998999999999999999999999999999999876544
Q ss_pred CCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEEC
Q 000851 989 IQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLID 1068 (1253)
Q Consensus 989 ~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~id 1068 (1253)
.+.... ....++..+.|+|+||+|+|+. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++|
T Consensus 458 ~~~~~~-~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~id 534 (708)
T TIGR01193 458 FINKKK-RTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLN 534 (708)
T ss_pred cccccc-ccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEC
Confidence 322211 0112234578999999999973 3579999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHhcceEEEccCCCcccccHHHHhccC-CCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000851 1069 GYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYG-NEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 1147 (1253)
Q Consensus 1069 G~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g-~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSg 1147 (1253)
|+|+++++++++|++|+||||||+||+|||||||.++ .++++++++++|++.++++++|.++|+||||.+||+|.+|||
T Consensus 535 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSg 614 (708)
T TIGR01193 535 GFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISG 614 (708)
T ss_pred CEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCH
Confidence 9999999999999999999999999999999999998 578999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChh
Q 000851 1148 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHE 1227 (1253)
Q Consensus 1148 GQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~ 1227 (1253)
||||||+||||++++|+|||||||||+||++||+.|++.|++. +++|+|+||||+++++.||+|+||++|+++|.|+|+
T Consensus 615 GQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~ 693 (708)
T TIGR01193 615 GQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHD 693 (708)
T ss_pred HHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999999999999999985 789999999999999999999999999999999999
Q ss_pred HHhhcccchHHHHHH
Q 000851 1228 QLLRKENGIYKQLIR 1242 (1253)
Q Consensus 1228 eLl~~~~g~y~~L~~ 1242 (1253)
||++ ++|.|++|++
T Consensus 694 ~L~~-~~~~y~~l~~ 707 (708)
T TIGR01193 694 ELLD-RNGFYASLIH 707 (708)
T ss_pred HHHh-cCCcHHHHhh
Confidence 9998 5899999985
No 33
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.5e-82 Score=794.48 Aligned_cols=569 Identities=26% Similarity=0.359 Sum_probs=486.6
Q ss_pred chHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 000851 34 SGSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAW 113 (1253)
Q Consensus 34 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1253)
++.++++++|.+++++. +++.+++.++..++.+..|++++.++|.+.... +. . ......++++++++.++..++.+
T Consensus 8 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 83 (592)
T PRK10790 8 WPTLKRLLAYGSPWRKP-LGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKG-NL-P-LGLVAGLAAAYVGLQLLAAGLHY 83 (592)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-Cc-c-hhHHHHHHHHHHHHHHHHHHHHH
Confidence 44566677777666443 456677777777888888889999999764321 11 0 11111112223333445566778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 114 IGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFT 193 (1253)
Q Consensus 114 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1253)
+..++....+.++..++|.++|+++++.|+++|++ .++|++++|+++|++.+++.+...+..++..+..+++.++++++
T Consensus 84 ~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~-~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (592)
T PRK10790 84 AQSLLFNRAAVGVVQQLRTDVMDAALRQPLSAFDT-QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFS 162 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999998 59999999999999999999999999999999989999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000851 194 SVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGK 273 (1253)
Q Consensus 194 ~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~ 273 (1253)
++|.+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+...
T Consensus 163 ~~~~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~ 242 (592)
T PRK10790 163 LDWRMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARM 242 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888887888888888888888889999999999999999999999999999999998888888777
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 274 KSGVAKGIG-VGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISI 352 (1253)
Q Consensus 274 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~ 352 (1253)
+..+..+.. ..+..++..+..+++++++++ +..|.+++|.+++++.+......|+..+...+..++++..+++|+.++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~ 321 (592)
T PRK10790 243 QTLRLDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFEL 321 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766655543 333334433333333334444 678999999999988888888889999999999999999999999999
Q ss_pred HhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCC
Q 000851 353 IKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS 432 (1253)
Q Consensus 353 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 432 (1253)
++.+++.. . .. ..+...++|+|+||+|+|+++ +++|+|+||++++||++||||+||||||||+++|+|+|+|++
T Consensus 322 l~~~~~~~-~--~~--~~~~~~~~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~ 395 (592)
T PRK10790 322 MDGPRQQY-G--ND--DRPLQSGRIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTE 395 (592)
T ss_pred hcCCCccC-C--CC--ccCCCCCeEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCC
Confidence 97654321 1 11 112234679999999999753 459999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCC
Q 000851 433 GKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGG 512 (1253)
Q Consensus 433 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g 512 (1253)
|+|++||+|+++++.+++|++|+||||||++|++||+|||++|+ ++++++++++|+.++++++++++|+||||.+||+|
T Consensus 396 G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g 474 (592)
T PRK10790 396 GEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQG 474 (592)
T ss_pred ceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 99999999999999999999999999999999999999999998 68899999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000851 513 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVE 592 (1253)
Q Consensus 513 ~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~ 592 (1253)
.+|||||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++
T Consensus 475 ~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~ 554 (592)
T PRK10790 475 NNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVE 554 (592)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred eeCcchhhhcCchHHHHHHhhhc
Q 000851 593 SGTHVDLISKGGEYAALVNLQSS 615 (1253)
Q Consensus 593 ~g~~~~l~~~~~~y~~~~~~~~~ 615 (1253)
.|+|+||+++++.|++++..|..
T Consensus 555 ~G~~~~L~~~~~~y~~l~~~~~~ 577 (592)
T PRK10790 555 QGTHQQLLAAQGRYWQMYQLQLA 577 (592)
T ss_pred EcCHHHHHhCCCHHHHHHHHHhh
Confidence 99999999999999999987643
No 34
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.9e-82 Score=811.18 Aligned_cols=560 Identities=26% Similarity=0.347 Sum_probs=487.0
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 672 LLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLM 751 (1253)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 751 (1253)
++...++.++.+...++++++..+.....++....+++....... ......+...++++.++..++.+++.++....
T Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (710)
T TIGR03796 145 LWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR---QDWLRPLLLGMGLTALLQGVLTWLQLYYLRRL 221 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444444443333333344445555554332211 11122334445555666778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000851 752 GEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAV 831 (1253)
Q Consensus 752 ~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv 831 (1253)
+.++..++|.++|+++++.|++||+. +++|++++|+++| +.+++++...+...+.+++.+++++++++.++|+++++
T Consensus 222 ~~~~~~~l~~~~~~~ll~l~~~~~~~--~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 298 (710)
T TIGR03796 222 QIKLAVGMSARFLWHILRLPVRFFAQ--RHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLI 298 (710)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcC--CcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999974 7999999999988 68999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000851 832 VAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGF 911 (1253)
Q Consensus 832 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1253)
+++.+|+.+++.++..+..++..++..+...+..+.+.|+++|+++||++|+|+.+.++|.+...+..+...+...+..+
T Consensus 299 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (710)
T TIGR03796 299 GIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQI 378 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888888888878888888889999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 000851 912 GYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQP 991 (1253)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 991 (1253)
...+..++..+..++++|+|++++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+.
T Consensus 379 ~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 458 (710)
T TIGR03796 379 LGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLL 458 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 88888999989999999999999999999999999999998899999999999999999999999999999876554322
Q ss_pred CCC---C-Cccc-ccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEE
Q 000851 992 DDP---A-SKEV-TEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVL 1066 (1253)
Q Consensus 992 ~~~---~-~~~~-~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~ 1066 (1253)
... . .... ++..+.|+|+||+|+|+.. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 459 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 537 (710)
T TIGR03796 459 EEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEIL 537 (710)
T ss_pred ccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Confidence 110 0 0111 2345789999999999843 45799999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000851 1067 IDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 1146 (1253)
Q Consensus 1067 idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1146 (1253)
+||+|+++++.+++|++|+||||||.+|+|||||||.++.|+.+++++++|++.++++++|.++|+||||.+||+|.+||
T Consensus 538 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LS 617 (710)
T TIGR03796 538 FDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLS 617 (710)
T ss_pred ECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCC
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecCh
Q 000851 1147 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSH 1226 (1253)
Q Consensus 1147 gGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~ 1226 (1253)
|||||||+|||||+++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++..||+|+||++|+|+|.|+|
T Consensus 618 GGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~ 695 (710)
T TIGR03796 618 GGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTH 695 (710)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCH
Confidence 9999999999999999999999999999999999999999987 58999999999999999999999999999999999
Q ss_pred hHHhhcccchHHHHH
Q 000851 1227 EQLLRKENGIYKQLI 1241 (1253)
Q Consensus 1227 ~eLl~~~~g~y~~L~ 1241 (1253)
+||++ ++|.|++|+
T Consensus 696 ~~Ll~-~~~~y~~l~ 709 (710)
T TIGR03796 696 EELWA-VGGAYARLI 709 (710)
T ss_pred HHHHH-cCCcHHHHh
Confidence 99998 689999987
No 35
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.9e-82 Score=786.12 Aligned_cols=565 Identities=23% Similarity=0.307 Sum_probs=483.0
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCch-hHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 671 ELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDS-QIKRVVDQVALIFVGLAVVTIPVYLLQHYFYT 749 (1253)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 749 (1253)
+++++.++.++.+.++++++++..+.....+..++.+++........ ........+...+++++++..++.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (574)
T PRK11160 6 PFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSH 85 (574)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566666666666666666655555556666666644321110 00000111223344555667778888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000851 750 LMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLA 829 (1253)
Q Consensus 750 ~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 829 (1253)
..+.+...++|.++|++++++|.+||++ +++|++++|+++|++.++.++...+..++.+++.++++++++++++|+++
T Consensus 86 ~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 86 DATFRVLTHLRVFTFSKLLPLSPAGLAR--YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHhhccChHhhcc--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999974 78999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000851 830 AVVAASLPLLIGA-FVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHI 908 (1253)
Q Consensus 830 lv~l~~~pl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 908 (1253)
+++++++|+++++ .++..+..++..++.++...+..+.+.|.++|+++||+|+.|+++.++|.+..++..+...+..+.
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888876553 355566667777788888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000851 909 SGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLII-TALAVAETLALAPDIVKGSQALGPVFGILYRKT 987 (1253)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~ 987 (1253)
.++...+.+++..+..++.+|+|+.++ .|.++.|.+++++.+... ...++..+...+..+..+..+.+|+.++++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~ 322 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKP 322 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888888888888888888899999884 788999998877665433 344666777788888899999999999987655
Q ss_pred cCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEE
Q 000851 988 AIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLI 1067 (1253)
Q Consensus 988 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~i 1067 (1253)
+.+.... ....+..+.|+|+||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 323 ~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i 399 (574)
T PRK11160 323 EVTFPTT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILL 399 (574)
T ss_pred CCCCCcc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 4221111 1112234679999999999743 347999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000851 1068 DGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 1147 (1253)
Q Consensus 1068 dG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSg 1147 (1253)
||+|+++++.+++|++|+||||||++|++||+|||.++.++.+|+++++|++.+++++++++ |+||||.+||+|.+|||
T Consensus 400 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSg 478 (574)
T PRK11160 400 NGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSG 478 (574)
T ss_pred CCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChh
Q 000851 1148 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHE 1227 (1253)
Q Consensus 1148 GQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~ 1227 (1253)
|||||+|||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+
T Consensus 479 GqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~ 558 (574)
T PRK11160 479 GEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQ 558 (574)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred HHhhcccchHHHHHHH
Q 000851 1228 QLLRKENGIYKQLIRL 1243 (1253)
Q Consensus 1228 eLl~~~~g~y~~L~~~ 1243 (1253)
||++ ++|.|++||+.
T Consensus 559 ~l~~-~~g~y~~l~~~ 573 (574)
T PRK11160 559 ELLA-QQGRYYQLKQR 573 (574)
T ss_pred HHHh-cCcHHHHHHhh
Confidence 9998 68999999863
No 36
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.9e-83 Score=722.26 Aligned_cols=573 Identities=26% Similarity=0.341 Sum_probs=476.2
Q ss_pred chHHHHHHHhhchhh----HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHH
Q 000851 34 SGSFLSLFAAADKID----CVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVAL 109 (1253)
Q Consensus 34 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (1253)
....+.+..|..+.. +..++.++++.+.+.......|.+++.++|.+......+ ............+.+..+...
T Consensus 10 ~~~~~~l~~~~~~k~~p~~r~~v~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~-a~~~~~~~~~~~y~iar~~s~ 88 (591)
T KOG0057|consen 10 LKILRSLVSYKWPKSRPVLRFRVFPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNP-AVLSTITALLAGYGIARLGSS 88 (591)
T ss_pred hHHHHHHHhhheecCCceeeehHHHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCc-chhhhhhHHHHHHHHHHHHHH
Confidence 344556666554432 223344444445556777777888999999874222112 112222233344555666778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 110 VSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFA 189 (1253)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 189 (1253)
++..++...+.++.+++.++.-.++|.|++.+++++|.+ ..+|++.+.+..-...|..++...+..++..++.+.....
T Consensus 89 ~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~-~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~ 167 (591)
T KOG0057|consen 89 VFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLS-RGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSG 167 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcC-CCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999987 5999999999999999999988887777776665544443
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHH
Q 000851 190 VG-FTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEA 268 (1253)
Q Consensus 190 ~~-~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~ 268 (1253)
.+ .-..+..+++.+..+.....+......+..+..++..++.+.+.+.+.|.+.|..+||+||.|++|.++|.....++
T Consensus 168 ~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~ 247 (591)
T KOG0057|consen 168 ILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTY 247 (591)
T ss_pred HHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHH
Confidence 32 33455566666555555555555555666666677778888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 269 LKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAAN 348 (1253)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~r 348 (1253)
.+...+.....++.......+.......+.+.|..-+.+|.+|+|+++.....+.++..|+..+...+..+.++..-+.-
T Consensus 248 ~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~ 327 (591)
T KOG0057|consen 248 ERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRT 327 (591)
T ss_pred HHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHH
Confidence 99999888887777766666666677777777888888999999999887766777778999999999888888888777
Q ss_pred HHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccC
Q 000851 349 IISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLY 428 (1253)
Q Consensus 349 i~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~ 428 (1253)
.+...+...++. ..+.+....++.|+|+||+|+|+.+ +++|+++||+|++||++||||+|||||||++++|.||+
T Consensus 328 ~~~l~~~~~~i~----~~~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~ 402 (591)
T KOG0057|consen 328 LFILLEVDEDIQ----EAALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFF 402 (591)
T ss_pred HHhhhhhhhhhh----hccCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHh
Confidence 776554433222 1112233445789999999999743 34999999999999999999999999999999999999
Q ss_pred CCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccc
Q 000851 429 EPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQV 508 (1253)
Q Consensus 429 ~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~ 508 (1253)
+ ++|+|+|||+|+++++.+++|+.|||||||..||++||.+||.||+|.+++|++.++|+.+++||-+.++|+||+|.|
T Consensus 403 d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~V 481 (591)
T KOG0057|consen 403 D-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLV 481 (591)
T ss_pred c-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhH
Confidence 9 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCC
Q 000851 509 GEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNG 588 (1253)
Q Consensus 509 g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G 588 (1253)
||+|..|||||||||+||||+++||||++||||||+||.+||+.+.+.+.+...+||+|+|+||+++++++|+|+++++|
T Consensus 482 GerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG 561 (591)
T KOG0057|consen 482 GERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNG 561 (591)
T ss_pred hhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred EEEEeeCcchhhhcCchHHHHHHhhh
Q 000851 589 QVVESGTHVDLISKGGEYAALVNLQS 614 (1253)
Q Consensus 589 ~i~~~g~~~~l~~~~~~y~~~~~~~~ 614 (1253)
++.|.|+|+||+++++.|+++|..|.
T Consensus 562 ~v~e~gth~ell~~s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 562 TVKEYGTHSELLAPSELYADLWTTQT 587 (591)
T ss_pred eeEEeccHHHHhhhhhHHHHHhcccc
Confidence 99999999999998899999997654
No 37
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=8.6e-82 Score=788.59 Aligned_cols=565 Identities=32% Similarity=0.470 Sum_probs=508.9
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 38 LSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVA 117 (1253)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (1253)
++++++.++++ ..++++++++++.+++.+..|++++.++|...... . ...+...+..++++.++..++.++..+
T Consensus 3 ~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~---~~~~~~~~~~~~~~~i~~~~~~~~~~~ 76 (571)
T TIGR02203 3 RRLWSYVRPYK-AGLVLAGVAMILVAATESTLAALLKPLLDDGFGGR--D---RSVLWWVPLVVIGLAVLRGICSFVSTY 76 (571)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC--c---hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666654 35667778888888888888999999998654311 1 122222333444555566778888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 118 FWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVWQ 197 (1253)
Q Consensus 118 ~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1253)
+..+.+.++..++|..+|+++++.|.++|++ .++|++++|+++|++.+++++...+..++.+++.+++.++++++++|.
T Consensus 77 ~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~-~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~ 155 (571)
T TIGR02203 77 LLSWVSNKVVRDIRVRMFEKLLGLPVSFFDR-QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQ 155 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999999999999999987 589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 198 LTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGV 277 (1253)
Q Consensus 198 l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 277 (1253)
+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+++.|+.+.++|++..++..+...+..+
T Consensus 156 l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (571)
T TIGR02203 156 LTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTS 235 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 000851 278 AKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENS 357 (1253)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 357 (1253)
..+....+..++..+..++++++|++++.+|.+|+|.++++..++.....|+..+...+..+++++.+.+|+.++++.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 315 (571)
T TIGR02203 236 AGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPP 315 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88888888888888888899999999999999999999999888888889999999999999999999999999998665
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEE
Q 000851 358 HSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILL 437 (1253)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 437 (1253)
+.+ . . ....++..+.|+++||+|+|++.++++|+|+||+|++||+++|+|+||||||||+++|+|+|+|++|+|++
T Consensus 316 ~~~-~--~-~~~~~~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i 391 (571)
T TIGR02203 316 EKD-T--G-TRAIERARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILL 391 (571)
T ss_pred CCC-C--C-CCCCCCCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEE
Confidence 432 1 1 11112234679999999999765456999999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCC-CCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCC
Q 000851 438 DGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKE-DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLS 516 (1253)
Q Consensus 438 ~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 516 (1253)
||+|+++++.+++|++|+||||+|++|++|++|||.++++ +.++++++++++.+++++++.++|+|+||.+||+|.+||
T Consensus 392 ~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LS 471 (571)
T TIGR02203 392 DGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLS 471 (571)
T ss_pred CCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCC
Confidence 9999999999999999999999999999999999999987 789999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCc
Q 000851 517 GGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTH 596 (1253)
Q Consensus 517 gGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 596 (1253)
|||||||+||||++++|+|+|||||||+||+++++.+.+.|.+..+++|+|+||||++.+..||+|++|++|++++.|+|
T Consensus 472 gGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~ 551 (571)
T TIGR02203 472 GGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTH 551 (571)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCH
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred chhhhcCchHHHHHHhh
Q 000851 597 VDLISKGGEYAALVNLQ 613 (1253)
Q Consensus 597 ~~l~~~~~~y~~~~~~~ 613 (1253)
++++++++.|+++++.+
T Consensus 552 ~~l~~~~~~~~~~~~~~ 568 (571)
T TIGR02203 552 NELLARNGLYAQLHNMQ 568 (571)
T ss_pred HHHHHcCCHHHHHHHHh
Confidence 99999999999988754
No 38
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2.6e-81 Score=779.60 Aligned_cols=566 Identities=27% Similarity=0.383 Sum_probs=493.9
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000851 36 SFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIG 115 (1253)
Q Consensus 36 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1253)
.++++++|.+++++ .++++++++++..++.+..|++++.++|.+.... . .. ...+.+++++++..+..++.
T Consensus 6 ~~~~l~~~l~~~k~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~----~---~~-~~~~~~~~~~~~~~~~~~~~ 76 (585)
T TIGR01192 6 VYVRALSYLNVHKN-RVLLIVIANITLAAITIAEPILFGRIIDAISSKS----D---VL-PTLALWAGFGVFNTIAYVLV 76 (585)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----c---HH-HHHHHHHHHHHHHHHHHHHH
Confidence 35678888887754 4566777788888888889999999999764311 1 01 11111222223334444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 116 VAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSV 195 (1253)
Q Consensus 116 ~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1253)
.++..+.+.++..++|.++|+|++++|++||++ .++|++++|+++|++.+++.+...+..++..++.+++.++++++++
T Consensus 77 ~~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~-~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 155 (585)
T TIGR01192 77 AREADRLAHGRRATLLTEAFGRIISMPLSWHQQ-RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMD 155 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555666666777789999999999999998 5899999999999999999998888888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000851 196 WQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKS 275 (1253)
Q Consensus 196 ~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~ 275 (1253)
|.+++++++++|+.+++...+.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+.
T Consensus 156 ~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (585)
T TIGR01192 156 WRLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPV 235 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000851 276 GVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKE 355 (1253)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~ 355 (1253)
.+..+....+..++..+..++++++|++++.+|.+|+|++++++.+......|+..+...+..++++..+++|+.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~ 315 (585)
T TIGR01192 236 LDWWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDS 315 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 78777777777777777888889999999999999999999988888778889999999999999999999999999986
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEE
Q 000851 356 NSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKI 435 (1253)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 435 (1253)
+++.+ . .......+...+.|+++||+|+|++. +++|+|+||++++||++||+||||||||||+++|+|+|+|++|+|
T Consensus 316 ~~~~~-~-~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i 392 (585)
T TIGR01192 316 VFQRE-E-PADAPELPNVKGAVEFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQI 392 (585)
T ss_pred Ccccc-C-CccCCCCCCCCCeEEEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEE
Confidence 54432 1 11111112234579999999999753 348999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCC
Q 000851 436 LLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQL 515 (1253)
Q Consensus 436 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~L 515 (1253)
.+||.|+++++.+++|++++||+|+|++|++|++|||.++.|+.++++++++++.+++++++.++|+|++|.+|++|.+|
T Consensus 393 ~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~L 472 (585)
T TIGR01192 393 LIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRL 472 (585)
T ss_pred EECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCC
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeC
Q 000851 516 SGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGT 595 (1253)
Q Consensus 516 SgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 595 (1253)
|||||||++|||||+++|++||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 473 SgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~ 552 (585)
T TIGR01192 473 SGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGS 552 (585)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred cchhhhcCchHHHHHHhhh
Q 000851 596 HVDLISKGGEYAALVNLQS 614 (1253)
Q Consensus 596 ~~~l~~~~~~y~~~~~~~~ 614 (1253)
|+++++++|.|++++..+.
T Consensus 553 ~~~l~~~~~~y~~l~~~~~ 571 (585)
T TIGR01192 553 FQELIQKDGRFYKLLRRSG 571 (585)
T ss_pred HHHHHHCCChHHHHHHhCc
Confidence 9999999999999997663
No 39
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=5.8e-82 Score=781.31 Aligned_cols=527 Identities=22% Similarity=0.282 Sum_probs=455.4
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 38 LSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVA 117 (1253)
Q Consensus 38 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (1253)
++++++.+++++ .+++++++.++.+++....|++++.++|...... .. .........++++.++..++.++..+
T Consensus 2 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (529)
T TIGR02868 2 LRILPLLQPRTR-RLVVAILLGALALGSAVALLGVSAWLISRAAEMP----PV-LYLSVAAVAVRAFGIGRAVFRYLERL 75 (529)
T ss_pred hhHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----hh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677776654 3456666777777777778889999999754211 00 00111111122334455677788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 118 FWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVWQ 197 (1253)
Q Consensus 118 ~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1253)
+..+.+.++..++|.++|+|++++|.+||++ .++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.
T Consensus 76 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~-~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 154 (529)
T TIGR02868 76 VGHDAALRSLGRLRVRVYDRLARLALAGRRR-FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVP 154 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccccc-CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 8889999999999999999999999999998 599999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 198 LTLLTLAVVPLIAVAGGAYTIT-MSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSG 276 (1253)
Q Consensus 198 l~l~~l~~~pl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~ 276 (1253)
+++++++.+|++.++...+.++ .++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..
T Consensus 155 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (529)
T TIGR02868 155 AALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAA 234 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888877666455444 456667778888999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000851 277 VAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKEN 356 (1253)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~ 356 (1253)
+..+...++..++..+..++++|+|++++.+|.+|+|.+++++.+......|+..+...+..++++.++++|+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~ 314 (529)
T TIGR02868 235 RATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAK 314 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88888888888888888888899999999999999999999888877778888898989999999999999999999876
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEE
Q 000851 357 SHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKIL 436 (1253)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 436 (1253)
++.++...+.....++..+.|+|+||+|+|++++ ++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~-~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~ 393 (529)
T TIGR02868 315 GPRPEGVVPAAGALGLGKPTLELRDLSFGYPGSP-PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVT 393 (529)
T ss_pred CCcCCCCCCCCcccCCCCceEEEEEEEEecCCCC-ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Confidence 5432110111111112345799999999998543 599999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCC
Q 000851 437 LDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLS 516 (1253)
Q Consensus 437 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 516 (1253)
+||+|++++ .+++|++|+||||||+||++||+|||++|.|+++++++++|++.+++++|+.++|+||||.+||+|.+||
T Consensus 394 i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LS 472 (529)
T TIGR02868 394 LDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLS 472 (529)
T ss_pred ECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCC
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCc
Q 000851 517 GGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRL 573 (1253)
Q Consensus 517 gGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l 573 (1253)
||||||||||||+++||+|||||||||+||+++|+.|++.+.+..+++|+|+||||+
T Consensus 473 GGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 473 GGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999999999988899999999996
No 40
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.7e-81 Score=784.84 Aligned_cols=565 Identities=31% Similarity=0.490 Sum_probs=489.6
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 672 LLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLM 751 (1253)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 751 (1253)
++.+.++.++.+++.+++.++........++.+..+++..+..... .....+..+++++.++..++.++..++....
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 92 (582)
T PRK11176 16 LWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADR---SVLKWMPLVVIGLMILRGITSFISSYCISWV 92 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555444444444434344444455455444322111 1112223334445666777778888888999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000851 752 GEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAV 831 (1253)
Q Consensus 752 ~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv 831 (1253)
+.+....+|..+|+++++.|.++|+ +.++|++++|+++|++.++..+...+..++.+++.++++++++++++|+++++
T Consensus 93 ~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 170 (582)
T PRK11176 93 SGKVVMTMRRRLFGHMMGMPVSFFD--KQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLI 170 (582)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhC--CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997 47899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000851 832 VAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGF 911 (1253)
Q Consensus 832 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1253)
+++++|+.++......+.+++..++.++...+..+.+.|.++|+++||+|+.++.+.++|.+..++..+...+..+...+
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T PRK11176 171 LIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSI 250 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888878888888888888888889999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 000851 912 GYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQP 991 (1253)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 991 (1253)
...+.+++..+..++++++|++++..|.+++|+++.++.+......++..+...+..+..+..+.+|+.++++.+++.+.
T Consensus 251 ~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~ 330 (582)
T PRK11176 251 SDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDE 330 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCC
Confidence 88888888888888999999999999999999999888888888889999999999999999999999998765433221
Q ss_pred CCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCcc
Q 000851 992 DDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYD 1071 (1253)
Q Consensus 992 ~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~d 1071 (1253)
. + ...++..+.|+++||+|+|+++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|
T Consensus 331 ~-~--~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~ 406 (582)
T PRK11176 331 G-K--RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHD 406 (582)
T ss_pred C-C--cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEE
Confidence 1 1 1122334579999999999743 4579999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCC-CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1072 IRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNED-ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1072 i~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~-~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
+++++.+++|++|+||||||++|++||||||.++.++ .+|++++++++.++++++++++|+||||.+|++|.+||||||
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqr 486 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQR 486 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHH
Confidence 9999999999999999999999999999999998754 799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHh
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
|||+|||||+++|+|||||||||+||++||+.+.+.|.+..+++|+|+||||+++++.||+|++|++|+++|.|+|++|+
T Consensus 487 QRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~ 566 (582)
T PRK11176 487 QRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELL 566 (582)
T ss_pred HHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hcccchHHHHHHHhhc
Q 000851 1231 RKENGIYKQLIRLQQD 1246 (1253)
Q Consensus 1231 ~~~~g~y~~L~~~~~~ 1246 (1253)
+ +++.|++|++.|.+
T Consensus 567 ~-~~~~y~~l~~~~~~ 581 (582)
T PRK11176 567 A-QNGVYAQLHKMQFG 581 (582)
T ss_pred h-CCChHHHHHHHHhc
Confidence 8 57999999987754
No 41
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=5e-81 Score=781.44 Aligned_cols=567 Identities=27% Similarity=0.406 Sum_probs=490.0
Q ss_pred hHHHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 35 GSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWI 114 (1253)
Q Consensus 35 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1253)
..+++++++.+++++ .+.+.+++.++..++.+..|++++.++|.+.... . .....+.+++++++..+..++
T Consensus 5 ~~~~~l~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~ 75 (588)
T PRK13657 5 RLYARVLQYLGAEKR-LGILLAVANVLLAAATFAEPILFGRIIDAISGKG----D----IFPLLAAWAGFGLFNIIAGVL 75 (588)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----c----HHHHHHHHHHHHHHHHHHHHH
Confidence 346677777766543 4455666677777777778888999999764311 1 111112222222333334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 115 GVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTS 194 (1253)
Q Consensus 115 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1253)
..++..+...++..++|.++|+|++++|+.+|++ .++|++++|+++|++.+.+.+...+..++..++.+++.+++++++
T Consensus 76 ~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (588)
T PRK13657 76 VARHADRLAHRRRLAVLTEYFERIIQLPLAWHSQ-RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFM 154 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCc-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555666666777789999999999999987 599999999999999999888888888888888888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000851 195 VWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKK 274 (1253)
Q Consensus 195 ~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 274 (1253)
+|.+++++++.+|+..++..++.++.++..++.++..++.++.+.|.++|+++||.|+.++.+.++|.+..++..+...+
T Consensus 155 ~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (588)
T PRK13657 155 NWRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMP 234 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888889999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 275 SGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIK 354 (1253)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~ 354 (1253)
.....+....+..++..+..++++++|++++.+|.+|+|++++++.+......|+..+...+..+.++..+++|+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~ 314 (588)
T PRK13657 235 VLSWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVED 314 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88877777777777777888888999999999999999999998887778888999999999999999999999999997
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcE
Q 000851 355 ENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGK 434 (1253)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 434 (1253)
.+++.+ . .......+...+.|+++||+|+|+++ +++|+|+||+++|||+++|+|+||||||||+++|+|+|+|++|+
T Consensus 315 ~~~~~~-~-~~~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~ 391 (588)
T PRK13657 315 AVPDVR-D-PPGAIDLGRVKGAVEFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGR 391 (588)
T ss_pred CCcccC-C-CCCCCCcCCCCCeEEEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCE
Confidence 654422 1 11111112234579999999999753 34999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCC
Q 000851 435 ILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 514 (1253)
Q Consensus 435 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 514 (1253)
|.+||+|+++++.+++|++|+||||+|++|++||+|||++++|+.++++++++++.+++++++.++|+|+||.+|++|.+
T Consensus 392 I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~ 471 (588)
T PRK13657 392 ILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQ 471 (588)
T ss_pred EEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCC
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEee
Q 000851 515 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 594 (1253)
Q Consensus 515 LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 594 (1253)
|||||||||+||||++++|+|||||||||+||+++++.+.+.|++..+++|+|+||||++.++.||+|++|++|++++.|
T Consensus 472 LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g 551 (588)
T PRK13657 472 LSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESG 551 (588)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred CcchhhhcCchHHHHHHhhh
Q 000851 595 THVDLISKGGEYAALVNLQS 614 (1253)
Q Consensus 595 ~~~~l~~~~~~y~~~~~~~~ 614 (1253)
+|++|+++++.|++++..+.
T Consensus 552 ~~~~l~~~~~~y~~l~~~~~ 571 (588)
T PRK13657 552 SFDELVARGGRFAALLRAQG 571 (588)
T ss_pred CHHHHHHCCChHHHHHHHhh
Confidence 99999999999999987553
No 42
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.2e-81 Score=779.35 Aligned_cols=544 Identities=26% Similarity=0.382 Sum_probs=479.8
Q ss_pred HhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 000851 63 GATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKD 142 (1253)
Q Consensus 63 ~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~ 142 (1253)
.++....|++++.++|.+.... . . ...+..+...++++.++..++.++..++....+.++..++|.++|+|++++|
T Consensus 8 ~~~~~~~p~~~~~iid~~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 8 AMLQLIPPKVVGIIVDGVTEQH--M-T-TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred HHHHHHHHHHHHHHHHHhccCC--c-c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3344455668899999764321 0 1 1112222333334444556677888888888999999999999999999999
Q ss_pred hhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 143 MSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVG-FTSVWQLTLLTLAVVPLIAVAGGAYTITMS 221 (1253)
Q Consensus 143 ~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~ 221 (1253)
+++|++ .++|++++|+++|++.++..+...+..++..++.++++++++ ++++|.+++++++++|+.+++...+.++.+
T Consensus 84 ~~~~~~-~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~ 162 (569)
T PRK10789 84 PEFYLR-HRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLH 162 (569)
T ss_pred HHHHcC-CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987 589999999999999999888888888888776666666655 589999999999999999999899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 222 TLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYA 301 (1253)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 301 (1253)
+..++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..+..+...++...+..++.++++++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 242 (569)
T PRK10789 163 ERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGG 242 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888888888777777777777778888999
Q ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEE
Q 000851 302 GILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSE 381 (1253)
Q Consensus 302 ~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 381 (1253)
++++.+|.+|+|.++++..+......|+..+...+..++++.++++|+.++++.+++.+ . .....+...+.|+++|
T Consensus 243 ~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~-~---~~~~~~~~~~~I~~~~ 318 (569)
T PRK10789 243 SWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVK-D---GSEPVPEGRGELDVNI 318 (569)
T ss_pred HHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc-C---CCCCCCCCCCcEEEEE
Confidence 99999999999999999888888888999999999999999999999999998765432 1 1111222346799999
Q ss_pred EEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccC
Q 000851 382 VCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEP 461 (1253)
Q Consensus 382 v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~ 461 (1253)
|+|+|+..++++|+|+||+++|||+++|+||||||||||+++|+|+|+|++|+|++||+|+++++..++|++|+||+|+|
T Consensus 319 v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~ 398 (569)
T PRK10789 319 RQFTYPQTDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTP 398 (569)
T ss_pred EEEECCCCCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCC
Confidence 99999854446999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCc
Q 000851 462 ALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEA 541 (1253)
Q Consensus 462 ~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ 541 (1253)
++|++|++|||+++.++.++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+|||||||
T Consensus 399 ~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEp 478 (569)
T PRK10789 399 FLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDA 478 (569)
T ss_pred eeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 99999999999999988999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCchHHHHHHhhhc
Q 000851 542 TSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSS 615 (1253)
Q Consensus 542 ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~~~~~~~ 615 (1253)
||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+|++++++++.|++++..|..
T Consensus 479 ts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~~~ 552 (569)
T PRK10789 479 LSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQQL 552 (569)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHhhh
Confidence 99999999999999999988899999999999999999999999999999999999999999999999987643
No 43
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3e-81 Score=797.33 Aligned_cols=548 Identities=25% Similarity=0.406 Sum_probs=480.4
Q ss_pred hhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 676 NAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHL 755 (1253)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 755 (1253)
.++.++.+...++++++..+.....++.+..+++........ .....+...++++.++..++.+++.++....+.++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (694)
T TIGR03375 142 LKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAF---ETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKA 218 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444445555555544322111 11222333444455566778888999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000851 756 TARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAAS 835 (1253)
Q Consensus 756 ~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~ 835 (1253)
..++|..+|++++++|++| + ++++|++++|+ +|++.+++++...+...+.+++..+.+++++++++|+++++.++.
T Consensus 219 ~~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 294 (694)
T TIGR03375 219 DLILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVA 294 (694)
T ss_pred HHHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999998 4 46999999999 799999999999888888888888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000851 836 LPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGV 915 (1253)
Q Consensus 836 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1253)
+|+.++..+...+..++..++..+...+..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+...+..+...+
T Consensus 295 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (694)
T TIGR03375 295 IPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNF 374 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888888888888899999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCC
Q 000851 916 SQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPA 995 (1253)
Q Consensus 916 ~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~ 995 (1253)
.+.+..+..++.+|+|++++..|.+++|.++++..+......++..+...+.++..+..+.+|+.++++.+++.+... .
T Consensus 375 ~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~-~ 453 (694)
T TIGR03375 375 AQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGT-R 453 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-C
Confidence 888888889999999999999999999999999999999999999999999999999999999999987765432211 1
Q ss_pred CcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCC
Q 000851 996 SKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL 1075 (1253)
Q Consensus 996 ~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i 1075 (1253)
....++..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|++++
T Consensus 454 ~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~ 532 (694)
T TIGR03375 454 FLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQI 532 (694)
T ss_pred CCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhC
Confidence 11112345689999999999743 45799999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1076 NLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1076 ~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
+++++|++|+||||||++|+|||+|||.+++++++++++++|++.++++++|+++|+||||.+||+|.+|||||||||+|
T Consensus 533 ~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlal 612 (694)
T TIGR03375 533 DPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVAL 612 (694)
T ss_pred CHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhc
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||++|+++|+|+|+||+++
T Consensus 613 ARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 613 ARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999874
No 44
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=5.9e-81 Score=782.08 Aligned_cols=566 Identities=25% Similarity=0.358 Sum_probs=479.0
Q ss_pred HHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 670 WELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYT 749 (1253)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 749 (1253)
++++.+.+++++.+.+.+++.++..+.....++.+..+++..+....... .....+.++++++.++..++.+++.++..
T Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (592)
T PRK10790 12 KRLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPL-GLVAGLAAAYVGLQLLAAGLHYAQSLLFN 90 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455566666666666666666666667777777765543221111 11111233344445556677788888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000851 750 LMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLA 829 (1253)
Q Consensus 750 ~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 829 (1253)
..+.+...++|.++|+++++.|.+||+. .++|++++|+++|++.+++.+...+..++.+++.+++.++++++++|+++
T Consensus 91 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 168 (592)
T PRK10790 91 RAAVGVVQQLRTDVMDAALRQPLSAFDT--QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMA 168 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999974 78999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000851 830 AVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHIS 909 (1253)
Q Consensus 830 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (1253)
+++++++|++++......+..+...++.++...+...++.|.++|+++||+|+.++++.+++.+..++..+...+..+..
T Consensus 169 li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (592)
T PRK10790 169 LVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLD 248 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888887777777777777777777888888999999999999999999999999999999888888777776666
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000851 910 GFG-YGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTA 988 (1253)
Q Consensus 910 ~~~-~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~ 988 (1253)
++. ..+..++..+...+..++++. +..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 327 (592)
T PRK10790 249 GFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQ 327 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 543 334444443333333333333 578999999999998888889999999999999999999999999999875433
Q ss_pred CCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEEC
Q 000851 989 IQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLID 1068 (1253)
Q Consensus 989 ~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~id 1068 (1253)
.... ...+...+.|+|+||+|+||+ +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++|
T Consensus 328 ~~~~----~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~id 401 (592)
T PRK10790 328 QYGN----DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLD 401 (592)
T ss_pred cCCC----CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEEC
Confidence 2111 111223467999999999983 3579999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChh
Q 000851 1069 GYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 1148 (1253)
Q Consensus 1069 G~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgG 1148 (1253)
|.|+++++++.+|++|+||||||.+|+|||||||.+++ +++|++++++++.++++++|+++|+||||.+|++|.+||||
T Consensus 402 g~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGG 480 (592)
T PRK10790 402 GRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVG 480 (592)
T ss_pred CEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHH
Confidence 99999999999999999999999999999999999997 68999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhH
Q 000851 1149 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQ 1228 (1253)
Q Consensus 1149 QkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~e 1228 (1253)
|||||+|||||+++|+|||||||||+||++||+.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|+|
T Consensus 481 qrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~ 560 (592)
T PRK10790 481 QKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQ 560 (592)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HhhcccchHHHHHHHhhcc
Q 000851 1229 LLRKENGIYKQLIRLQQDK 1247 (1253)
Q Consensus 1229 Ll~~~~g~y~~L~~~~~~~ 1247 (1253)
|++ +++.|+++++.|...
T Consensus 561 L~~-~~~~y~~l~~~~~~~ 578 (592)
T PRK10790 561 LLA-AQGRYWQMYQLQLAG 578 (592)
T ss_pred HHh-CCCHHHHHHHHHhhh
Confidence 998 579999999877543
No 45
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-84 Score=713.32 Aligned_cols=504 Identities=31% Similarity=0.446 Sum_probs=436.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 737 TIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVT 816 (1253)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~ 816 (1253)
++++.-+++++...+..-..+++-..+|+|+.++.+.|+-. ..+|+++....+..+.+. ++.....++.-.+.-+.+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~--rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~v 348 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLN--RRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGV 348 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeec--ccccceeehhccCcchhh-HHHHHHhhcccHHHHhhh
Confidence 34566677777788888889999999999999999999864 678988877766665555 333333333333333333
Q ss_pred HHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHH
Q 000851 817 AFVIA-FILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASEL 895 (1253)
Q Consensus 817 ~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~ 895 (1253)
+++.. ..++|+.+++++.+..+.+...........++.+++.....+..+...+++-+.+|||-|+.|++..++|.++.
T Consensus 349 a~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAi 428 (790)
T KOG0056|consen 349 AMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAI 428 (790)
T ss_pred hhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHH
Confidence 33332 35688899888888777766665555555566667777777778888999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 896 SQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQA 975 (1253)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 975 (1253)
..+++..++....-.+.+.+...+..+..+..-.+..+.|..+..+.|+++....+++...+|+.........+++...-
T Consensus 429 l~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiD 508 (790)
T KOG0056|consen 429 LKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFID 508 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhh
Confidence 99999998887777777766666666666555566666777889999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHh
Q 000851 976 LGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVM 1055 (1253)
Q Consensus 976 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~ 1055 (1253)
+++.+++++++++... .|...+....+|.|+|+||+|.|. |.+|||+||||+++||+++|+|||||+||||++++|+
T Consensus 509 mEnmfdllkee~eVvd-~P~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLf 585 (790)
T KOG0056|consen 509 MENMFDLLKEEPEVVD-LPGAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLF 585 (790)
T ss_pred HHHHHHHhhcCchhhc-CCCCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHH
Confidence 9999999987665432 223333345679999999999997 5679999999999999999999999999999999999
Q ss_pred ccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCcc
Q 000851 1056 RFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQ 1135 (1253)
Q Consensus 1056 r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gld 1135 (1253)
||||.++|.|+|||+||+.+..++||++||+||||.+||++||.+||.|+.|.+++||+.+|++.|++||-|.++|+||+
T Consensus 586 Rffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~ 665 (790)
T KOG0056|consen 586 RFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYN 665 (790)
T ss_pred HHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEE
Q 000851 1136 SHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVL 1215 (1253)
Q Consensus 1136 t~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl 1215 (1253)
|.|||+|-.||||||||+||||+++++|.|++||||||+||..||+.||.+|.+..+++|.|+|||||+||.+||.|+|+
T Consensus 666 t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi 745 (790)
T KOG0056|consen 666 TRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVI 745 (790)
T ss_pred hhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCEEEEecChhHHhhcccchHHHHHHHhhc
Q 000851 1216 QQGKVAEIGSHEQLLRKENGIYKQLIRLQQD 1246 (1253)
Q Consensus 1216 ~~G~ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1246 (1253)
++|+|+|.|+|+||+++.+|.|++||+.|+.
T Consensus 746 ~~G~IvErG~HeeLl~rdgG~Ya~MWq~qqa 776 (790)
T KOG0056|consen 746 SNGRIVERGRHEELLKRDGGAYADMWQAQQA 776 (790)
T ss_pred eCCeEeecCcHHHHHhccCCcHHHHHHHHHh
Confidence 9999999999999999889999999987653
No 46
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.8e-80 Score=787.64 Aligned_cols=558 Identities=29% Similarity=0.432 Sum_probs=490.0
Q ss_pred hchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 677 AAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLT 756 (1253)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 756 (1253)
++.++.+...++++++..+.....++.+..+++....... ......+...++++.++..++.+++.++....+.++.
T Consensus 135 ~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~---~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 211 (694)
T TIGR01846 135 IRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG---LSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRID 211 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444443444444555555554432211 1122334445555666677888899999999999999
Q ss_pred HHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000851 757 ARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASL 836 (1253)
Q Consensus 757 ~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~ 836 (1253)
.++|.++|++++++|++||+. +++|++++|+ +|++.+++++...+...+.+++..++.++++++++|++++++++++
T Consensus 212 ~~l~~~~~~~l~~l~~~~f~~--~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 288 (694)
T TIGR01846 212 VELGARLYRHLLGLPLGYFES--RRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSL 288 (694)
T ss_pred HHHHHHHHHHHHcCCHHHcCC--CCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999974 8999999999 6999999999988888888888888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000851 837 PLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVS 916 (1253)
Q Consensus 837 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1253)
|+++++.+...+..++..++..+...+..+.+.|+++|+++||++|.|+.+.++|.+..++..+...+..+...+...+.
T Consensus 289 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (694)
T TIGR01846 289 VCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAI 368 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888887777778888888999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCC
Q 000851 917 QLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPAS 996 (1253)
Q Consensus 917 ~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~ 996 (1253)
+++..+..++.+|+|++++..|.+|+|+++++..+......++..+...+..+..+..+.+|+.++++.+++.+... .
T Consensus 369 ~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~--~ 446 (694)
T TIGR01846 369 ELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSAG--L 446 (694)
T ss_pred HHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCC--C
Confidence 99988999999999999999999999999999888889999999999999999999999999999987654432211 1
Q ss_pred cccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC
Q 000851 997 KEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN 1076 (1253)
Q Consensus 997 ~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~ 1076 (1253)
...+...+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++
T Consensus 447 ~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~ 525 (694)
T TIGR01846 447 AALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIAD 525 (694)
T ss_pred CCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCC
Confidence 1122335689999999999743 356999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1077 LRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1077 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
.+++|++|+||||||.+|++||+|||.+++++.+++++++|++.++++++++++|+||||.+|++|.+||||||||++||
T Consensus 526 ~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lA 605 (694)
T TIGR01846 526 PAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIA 605 (694)
T ss_pred HHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccch
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGI 1236 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~ 1236 (1253)
|||+++|+|||||||||+||+++|+.+.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+||++ ++|.
T Consensus 606 Rall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~-~~~~ 684 (694)
T TIGR01846 606 RALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLA-LQGL 684 (694)
T ss_pred HHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHH-cCCh
Confidence 999999999999999999999999999999999888999999999999999999999999999999999999998 5899
Q ss_pred HHHHHHHh
Q 000851 1237 YKQLIRLQ 1244 (1253)
Q Consensus 1237 y~~L~~~~ 1244 (1253)
|++|++.|
T Consensus 685 y~~l~~~~ 692 (694)
T TIGR01846 685 YARLWQQQ 692 (694)
T ss_pred HHHHHHhh
Confidence 99999865
No 47
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=7.5e-80 Score=771.37 Aligned_cols=569 Identities=34% Similarity=0.521 Sum_probs=497.1
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 37 FLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGV 116 (1253)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1253)
++.++++.+++++ .+.+.+++.++.+++....|++++.++|.+.... + ...+.....+++++.++..++.+++.
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (576)
T TIGR02204 6 LAALWPFVRPYRG-RVLAALVALLITAAATLSLPYAVRLMIDHGFSKD-S----SGLLNRYFAFLLVVALVLALGTAARF 79 (576)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc-c----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677666543 4455666777778888888889999999743211 1 11122222233333344556677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 117 AFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVW 196 (1253)
Q Consensus 117 ~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1253)
++..+.+.++..++|..+++++++.|.++|++ .++|++++|+++|++.+++.+...+..++..++.+++.++++++++|
T Consensus 80 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~-~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (576)
T TIGR02204 80 YLVTWLGERVVADIRRAVFAHLISLSPSFFDK-NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSP 158 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcc-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 88889999999999999999999999999987 58999999999999999999998888989999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 197 QLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSG 276 (1253)
Q Consensus 197 ~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~ 276 (1253)
.+++++++.+|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..
T Consensus 159 ~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (576)
T TIGR02204 159 KLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRI 238 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888889999999999999999999999999999999999999999999999999998888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000851 277 VAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKEN 356 (1253)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~ 356 (1253)
........+..++..+..++++++|++++.+|.+|+|.++++..+......|+..+...+..++++..+++|+.++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~ 318 (576)
T TIGR02204 239 RTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAE 318 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77766666666666677778889999999999999999988888888888899999999999999999999999999865
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEE
Q 000851 357 SHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKI 435 (1253)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 435 (1253)
++.+.. ........+..+.|+++||+|+|++++ +++|+|+||+++|||+++|+||||||||||+++|+|+|+|++|+|
T Consensus 319 ~~~~~~-~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I 397 (576)
T TIGR02204 319 PDIKAP-AHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRI 397 (576)
T ss_pred CcCCCC-CCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE
Confidence 542211 111111112235799999999998543 459999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCC
Q 000851 436 LLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQL 515 (1253)
Q Consensus 436 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~L 515 (1253)
++||.|+++++.+++|++|+||||+|++|++||+|||.+|.|+.++++++++++.++++++++++|+|++|.+||+|.+|
T Consensus 398 ~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~L 477 (576)
T TIGR02204 398 LLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTL 477 (576)
T ss_pred EECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcC
Confidence 99999999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeC
Q 000851 516 SGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGT 595 (1253)
Q Consensus 516 SgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 595 (1253)
|||||||++||||++++|++||||||||+||+++++.+.+.|+++.+++|+|+||||++.++.+|+|++|++|++++.|+
T Consensus 478 SgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~ 557 (576)
T TIGR02204 478 SGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGT 557 (576)
T ss_pred CHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeec
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred cchhhhcCchHHHHHHhh
Q 000851 596 HVDLISKGGEYAALVNLQ 613 (1253)
Q Consensus 596 ~~~l~~~~~~y~~~~~~~ 613 (1253)
|++++++++.|++++..|
T Consensus 558 ~~~l~~~~~~~~~l~~~~ 575 (576)
T TIGR02204 558 HAELIAKGGLYARLARLQ 575 (576)
T ss_pred HHHHHHcCChHHHHHhhc
Confidence 999999999999988654
No 48
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.5e-81 Score=707.29 Aligned_cols=514 Identities=29% Similarity=0.438 Sum_probs=443.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHH
Q 000851 724 DQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADR 803 (1253)
Q Consensus 724 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~ 803 (1253)
......|.++.++..++.-++.+++.++.+++.++.-.++|+++++++++||-. ..+|.+.+....-...+...+...
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~--~~tG~l~~~idRgsraI~~vl~~~ 151 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLS--RGTGALNRIIDRGSRAISFVLSAM 151 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcC--CCcchHHHHHHhhhhHHHHHHHHH
Confidence 345667888888899999999999999999999999999999999999999964 678998888888888777776665
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcC
Q 000851 804 LSIIVQNVALTVTAFVIA-FILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYG 882 (1253)
Q Consensus 804 l~~~~~~~~~~~~~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~ 882 (1253)
+..++..++.+....... .-++...+++.+..+..+..+.+....+..++.++++++...+.+.+.|++.|.++||+||
T Consensus 152 V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfN 231 (591)
T KOG0057|consen 152 VFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFN 231 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcc
Confidence 555555544433333222 2334455555555555555555555666667778889999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Q 000851 883 IEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAET 962 (1253)
Q Consensus 883 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~ 962 (1253)
.|++..++|...+.++.+...+.....++......++.....+.+.+++..=+..+..++|+++.......+...++..+
T Consensus 232 nE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~L 311 (591)
T KOG0057|consen 232 NEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFL 311 (591)
T ss_pred cHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHH
Confidence 99999999999999999999998888888888888888788888888888878899999999998888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcC
Q 000851 963 LALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQ 1042 (1253)
Q Consensus 963 ~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~ 1042 (1253)
...+.++.++..-+...+...+........ ..+....++.|+|+||+|+|+ |+++||+++||+|++||||||||+
T Consensus 312 g~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~---~~~i~~~~~~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~ 386 (591)
T KOG0057|consen 312 GSVYRELRQALTDMRTLFILLEVDEDIQEA---ALPIELFGGSIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGS 386 (591)
T ss_pred HHHHHHHHHHHHhHHHHHhhhhhhhhhhhc---cCCcccCCCcEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECC
Confidence 888888877776666665543322211110 112233467899999999997 456799999999999999999999
Q ss_pred CCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhc
Q 000851 1043 SGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAAN 1122 (1253)
Q Consensus 1043 SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~ 1122 (1253)
|||||||++++|+||++ ++|+|+|||+|+++++++.+|+.|||||||..||++||.+||.||++.+++||+.++||+++
T Consensus 387 nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~ 465 (591)
T KOG0057|consen 387 NGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAG 465 (591)
T ss_pred CCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcC
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccC
Q 000851 1123 AHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHR 1202 (1253)
Q Consensus 1123 l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHr 1202 (1253)
+||.|.++|+||+|.|||+|..||||||||++||||++++|+|+++|||||+||.+||+.+.+++.....++|+|+|+||
T Consensus 466 ~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~ 545 (591)
T KOG0057|consen 466 LHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHR 545 (591)
T ss_pred cHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred chhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHHHHHhhc
Q 000851 1203 LSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQD 1246 (1253)
Q Consensus 1203 l~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1246 (1253)
++++++||+|+|||+|+++|+|+|+||++ +.+.|+++|..|..
T Consensus 546 l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 546 LDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQTS 588 (591)
T ss_pred chhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccccc
Confidence 99999999999999999999999999999 78999999987643
No 49
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-79 Score=696.87 Aligned_cols=504 Identities=25% Similarity=0.362 Sum_probs=432.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000851 732 GLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNV 811 (1253)
Q Consensus 732 ~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~ 811 (1253)
++++...+..++..++.+.+..++...+|.++|+++...+..-.. ...+|+++||++.|++.+|+.+-..+...+..+
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~--r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~ 143 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLL--RYRSGDLLNRLVADVDALDNLYLRVIAPAVVAL 143 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHH--hcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHH
Confidence 456667777788888889999999999999999999877666554 478999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHH
Q 000851 812 ALTVTAFVIAFILSWRLAAVVAASLPL-LIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQ 890 (1253)
Q Consensus 812 ~~~~~~~~~~~~~~~~l~lv~l~~~pl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~ 890 (1253)
+...+..+..-+++|.+++.+..++.+ ++++.++..++-++..+...+......+++.|.+.|....+.||.++.+.+.
T Consensus 144 ~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~ 223 (573)
T COG4987 144 VLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTA 223 (573)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHH
Confidence 777777777778888888766654443 4445566667777788888888899999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000851 891 FASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETL-ALAPDI 969 (1253)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 969 (1253)
+....+.+.+...+..++..+.....+++..+..+..+.+....+..|..+.-....+++.+.....+...+. ....+.
T Consensus 224 l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~l 303 (573)
T COG4987 224 LEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHL 303 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHh
Confidence 9999999999999999999999988888887777744444444444555553333333333333333333333 444666
Q ss_pred HHHHHHHHHHHHHhcccccCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHH
Q 000851 970 VKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKST 1049 (1253)
Q Consensus 970 ~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKST 1049 (1253)
.+...+..|+.++.+.+++...+.+. .+.....++++||+|+||++ .+++|+|+||++++||||||+|||||||||
T Consensus 304 gq~~~Sa~Rl~~i~~q~~e~~~~~~~---~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKST 379 (573)
T COG4987 304 GQVIASARRLNDILDQKPEVTFPDEQ---TATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKST 379 (573)
T ss_pred hHHHHHHHHHhhhccCCcccCCCccc---cCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHH
Confidence 77788889999888777665443111 11111279999999999964 557999999999999999999999999999
Q ss_pred HHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHh
Q 000851 1050 VISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISR 1129 (1253)
Q Consensus 1050 L~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~ 1129 (1253)
++++|.|.|+|++|+|.++|.|++.++.+++|+.|++++|.++||++|+|+||.+++|++||||+|++++++++++++++
T Consensus 380 llqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~ 459 (573)
T COG4987 380 LLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLES 459 (573)
T ss_pred HHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhcc
Q 000851 1130 MPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNA 1209 (1253)
Q Consensus 1130 lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~ 1209 (1253)
.|+||||++||+|.+||||||||+||||+||+|.+++||||||.+||++||++|++.|.+..+|||+|+||||+..++.|
T Consensus 460 ~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~ 539 (573)
T COG4987 460 APDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERM 539 (573)
T ss_pred ChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCEEEEecChhHHhhcccchHHHHHH
Q 000851 1210 DKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIR 1242 (1253)
Q Consensus 1210 D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~~ 1242 (1253)
|||+|||+|+++|+|+|++|++ ++|.|++|++
T Consensus 540 drIivl~~Gkiie~G~~~~Ll~-~~g~~~~l~q 571 (573)
T COG4987 540 DRIIVLDNGKIIEEGTHAELLA-NNGRYKRLYQ 571 (573)
T ss_pred CEEEEEECCeeeecCCHHhhhc-cccHHHHHhc
Confidence 9999999999999999999999 7999999986
No 50
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=3.8e-79 Score=764.70 Aligned_cols=563 Identities=33% Similarity=0.538 Sum_probs=505.2
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 672 LLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLM 751 (1253)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 751 (1253)
++++.++.++.++++.+++++.++..+..++.+..+++..+.... ......+..+++++.++..++.+++.++....
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 81 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD---RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWV 81 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455666777777777777777777777777776665443221 11222334456666777778888899999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000851 752 GEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAV 831 (1253)
Q Consensus 752 ~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv 831 (1253)
+.++...+|..+++++++.|.++|++ .++|++++|+++|++.+++.+...+..++.+++.++++++++++++|.++++
T Consensus 82 ~~~~~~~lr~~l~~~~~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i 159 (571)
T TIGR02203 82 SNKVVRDIRVRMFEKLLGLPVSFFDR--QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLI 159 (571)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999974 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000851 832 VAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGF 911 (1253)
Q Consensus 832 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1253)
++++.|+.++..++..+..++..++..+...+..+.+.|.++|+++||+++.++++.++|.+..++..+...+..+..++
T Consensus 160 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (571)
T TIGR02203 160 VVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSI 239 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 000851 912 GYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQP 991 (1253)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 991 (1253)
...+..++..+..++.+++|+.++..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 319 (571)
T TIGR02203 240 SSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDT 319 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 88888998888999999999999999999999999999999999999999999999999999999999998875543221
Q ss_pred CCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCcc
Q 000851 992 DDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYD 1071 (1253)
Q Consensus 992 ~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~d 1071 (1253)
.. .+..+..+.|+++||+|+|+++ +.++|+|+||+|+|||+++|+|+||||||||+++|+|+|+|++|+|++||+|
T Consensus 320 ~~---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~ 395 (571)
T TIGR02203 320 GT---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHD 395 (571)
T ss_pred CC---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEe
Confidence 11 1112234679999999999754 4579999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcceEEEccCCCcccccHHHHhccCCC-CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1072 IRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNE-DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1072 i~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
+++++.+++|++|+||||||++|+|||||||.++++ +.++++++++++.+++++++.++|+||||++|++|.+||||||
T Consensus 396 i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqr 475 (571)
T TIGR02203 396 LADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQR 475 (571)
T ss_pred HHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHH
Confidence 999999999999999999999999999999999986 7999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHh
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
||||||||++++|+|||||||||+||+++++.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|+
T Consensus 476 QRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~ 555 (571)
T TIGR02203 476 QRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELL 555 (571)
T ss_pred HHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hcccchHHHHHHHh
Q 000851 1231 RKENGIYKQLIRLQ 1244 (1253)
Q Consensus 1231 ~~~~g~y~~L~~~~ 1244 (1253)
+ .++.|+++++.+
T Consensus 556 ~-~~~~~~~~~~~~ 568 (571)
T TIGR02203 556 A-RNGLYAQLHNMQ 568 (571)
T ss_pred H-cCCHHHHHHHHh
Confidence 8 478999998765
No 51
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=7.5e-79 Score=761.77 Aligned_cols=565 Identities=28% Similarity=0.415 Sum_probs=482.5
Q ss_pred HHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 669 IWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFY 748 (1253)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 748 (1253)
+++++++.++.++.+.+.++++++..+.....++.+..+++...... ....+..+++++.++..+..++..++.
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (588)
T PRK13657 7 YARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG------DIFPLLAAWAGFGLFNIIAGVLVARHA 80 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555666666666666666666666666666666666554321 111122223333333333444444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000851 749 TLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRL 828 (1253)
Q Consensus 749 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 828 (1253)
.....++..+++.++|+++++.|..+|+. .++|++++|+++|++.+...+...+...+..++..++.+++++.++|.+
T Consensus 81 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 158 (588)
T PRK13657 81 DRLAHRRRLAVLTEYFERIIQLPLAWHSQ--RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRL 158 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHCc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666677789999999999999974 7899999999999999998888888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000851 829 AAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHI 908 (1253)
Q Consensus 829 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 908 (1253)
++++++++|+.+++.....+..+...++..+...+..+.+.|.++|+++||+|+.++.+.+++.+..++..+...+...+
T Consensus 159 ~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (588)
T PRK13657 159 SLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSW 238 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888877777777777777777888889999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000851 909 SGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTA 988 (1253)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~ 988 (1253)
..+...+.+++..+..++++++|++++.+|.+++|++++++.+......++..+...+..+..+..+.+++.++++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~ 318 (588)
T PRK13657 239 WALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPD 318 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 88888888888888889999999999999999999999998888888889999999999999999999999988765443
Q ss_pred CCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEEC
Q 000851 989 IQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLID 1068 (1253)
Q Consensus 989 ~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~id 1068 (1253)
.+.. +......+..+.|+++||+|+||+ +.++|+|+||+++|||++||||+||||||||+++|+|+|+|++|+|.+|
T Consensus 319 ~~~~-~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~ 395 (588)
T PRK13657 319 VRDP-PGAIDLGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILID 395 (588)
T ss_pred cCCC-CCCCCcCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEEC
Confidence 2111 111111223457999999999974 2469999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChh
Q 000851 1069 GYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 1148 (1253)
Q Consensus 1069 G~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgG 1148 (1253)
|.|+++++.+++|++|+||||||.+|+|||||||.+++|+.+|++++++++.+++++++.++|+|+||.+|++|.+||||
T Consensus 396 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 475 (588)
T PRK13657 396 GTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGG 475 (588)
T ss_pred CEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHH
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhH
Q 000851 1149 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQ 1228 (1253)
Q Consensus 1149 QkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~e 1228 (1253)
|||||||||||+++|+|||||||||+||+++|+.|.+.|++..+++|+|+||||++.++.||+|++|++|+++|.|+|++
T Consensus 476 q~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~ 555 (588)
T PRK13657 476 ERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDE 555 (588)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999878999999999999999999999999999999999999
Q ss_pred HhhcccchHHHHHHHhh
Q 000851 1229 LLRKENGIYKQLIRLQQ 1245 (1253)
Q Consensus 1229 Ll~~~~g~y~~L~~~~~ 1245 (1253)
|++ +++.|++|++.+.
T Consensus 556 l~~-~~~~y~~l~~~~~ 571 (588)
T PRK13657 556 LVA-RGGRFAALLRAQG 571 (588)
T ss_pred HHH-CCChHHHHHHHhh
Confidence 998 5799999998664
No 52
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=5.5e-79 Score=754.76 Aligned_cols=525 Identities=26% Similarity=0.323 Sum_probs=464.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 52 MFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVAFWMQTGERQTARLR 131 (1253)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR 131 (1253)
+.++++++++.+++.+..|+++++++|.+.... . . ...+..+...+++++++..++.++..++..+.+.++..++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAG-E--P-LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-C--C-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667777788888888999999999863111 0 1 12233333444555566778888999999999999999999
Q ss_pred HHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 132 LKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAV 211 (1253)
Q Consensus 132 ~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~ 211 (1253)
.++|++++++|..+|++ .++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++++.+|+..+
T Consensus 81 ~~l~~~l~~~~~~~~~~-~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQG-RPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHhCCchhhcc-CChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999999999999987 69999999999999999999999889999998888889999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 212 AGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLF 291 (1253)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1253)
+...+.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.......+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999999999999999999999999999888888887777777776667666
Q ss_pred HHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCC
Q 000851 292 CAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLP 371 (1253)
Q Consensus 292 ~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~ 371 (1253)
+..++++.++++.+.+|.+|+|.+++++.+......|+..+...+..++++..+++|+.++++.+++.. + .. ....
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~-~--~~-~~~~ 315 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLA-G--KA-PVTA 315 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccC-C--Cc-CCCC
Confidence 666666667778888999999999988877777788999999999999999999999999997543211 1 11 1111
Q ss_pred CCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHh
Q 000851 372 KLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLR 451 (1253)
Q Consensus 372 ~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 451 (1253)
...+.|+++||+|+|+++++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|
T Consensus 316 ~~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 316 APAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 12357999999999986544699999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000851 452 EQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 531 (1253)
Q Consensus 452 ~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~ 531 (1253)
++|+||+|+|++|++||+|||.++.++.++++++++++.++++++++++|+||||.+||+|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEE
Q 000851 532 NPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVL 585 (1253)
Q Consensus 532 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl 585 (1253)
+|+|+|||||||+||+++++.+.+.+.++.+++|+|+||||+++++.||+|++|
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999998899999999999999999999985
No 53
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=5.1e-78 Score=750.11 Aligned_cols=566 Identities=28% Similarity=0.381 Sum_probs=487.4
Q ss_pred HHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 669 IWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFY 748 (1253)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 748 (1253)
+++++++.+++++.+.+.++++++..+.....++.++.+++....... ...+..+++++.+...+..++..++.
T Consensus 7 ~~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (585)
T TIGR01192 7 YVRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD------VLPTLALWAGFGVFNTIAYVLVAREA 80 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666777777777777777777777778888888876543211 01111222223333344444555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000851 749 TLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRL 828 (1253)
Q Consensus 749 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 828 (1253)
..+..++..++|.++|++++++|++||+. +++|++++|+++|++.++..+...+...+..++.+++.+++++.++|.+
T Consensus 81 ~~~~~~~~~~lr~~~~~~l~~l~~~~~~~--~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 158 (585)
T TIGR01192 81 DRLAHGRRATLLTEAFGRIISMPLSWHQQ--RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRL 158 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666667777789999999999999974 7899999999999999999998888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000851 829 AAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHI 908 (1253)
Q Consensus 829 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 908 (1253)
++++++++|+++++.....+..++..++..+...+..+.+.|+++|+++||+|+.++.+.+++.+..++..+...+..+.
T Consensus 159 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (585)
T TIGR01192 159 SIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDW 238 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888877777777777777788888999999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000851 909 SGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTA 988 (1253)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~ 988 (1253)
.++...+...+..+..++++++|++++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~ 318 (585)
T TIGR01192 239 WALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQ 318 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 88877888888888888899999999999999999999988888888889999999999999999999999998875443
Q ss_pred CCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEEC
Q 000851 989 IQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLID 1068 (1253)
Q Consensus 989 ~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~id 1068 (1253)
.+.... ....++..+.|+++||+|+|++ +.++|+|+||+|++||++||+||||||||||+++|+|+|+|++|+|.+|
T Consensus 319 ~~~~~~-~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~ 395 (585)
T TIGR01192 319 REEPAD-APELPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILID 395 (585)
T ss_pred ccCCcc-CCCCCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEEC
Confidence 221111 0111123457999999999974 2468999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChh
Q 000851 1069 GYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 1148 (1253)
Q Consensus 1069 G~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgG 1148 (1253)
|.|+++++.+.+|++++||||||.+|++||+|||.++.++.++++++++++.+++++++.++|+|+||.+|++|.+||||
T Consensus 396 g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgG 475 (585)
T TIGR01192 396 GIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGG 475 (585)
T ss_pred CEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHH
Confidence 99999999999999999999999999999999999998888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhH
Q 000851 1149 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQ 1228 (1253)
Q Consensus 1149 QkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~e 1228 (1253)
||||++|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++
T Consensus 476 q~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 555 (585)
T TIGR01192 476 ERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQE 555 (585)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HhhcccchHHHHHHHhhc
Q 000851 1229 LLRKENGIYKQLIRLQQD 1246 (1253)
Q Consensus 1229 Ll~~~~g~y~~L~~~~~~ 1246 (1253)
|++ ++|.|+++++.+..
T Consensus 556 l~~-~~~~y~~l~~~~~~ 572 (585)
T TIGR01192 556 LIQ-KDGRFYKLLRRSGL 572 (585)
T ss_pred HHH-CCChHHHHHHhCcc
Confidence 998 68999999987753
No 54
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=9.8e-79 Score=752.49 Aligned_cols=522 Identities=22% Similarity=0.277 Sum_probs=444.4
Q ss_pred HHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 674 KLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGE 753 (1253)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 753 (1253)
++.+++++.+.+..++.++........++.+..+++....... ......+...++++.++..++.++..++....+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP---VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAAL 82 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555555555556666666654432111 0000011111223445566777788888889999
Q ss_pred HHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000851 754 HLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVA 833 (1253)
Q Consensus 754 ~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l 833 (1253)
++..++|.++|+++++.|.+||+ ++++|++++|+++|++.++..+...+..++.+++.++++++++++++|.++++++
T Consensus 83 ~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l 160 (529)
T TIGR02868 83 RSLGRLRVRVYDRLARLALAGRR--RFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLA 160 (529)
T ss_pred HHHHHHHHHHHHHhhccCccccc--cCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999997 4789999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000851 834 ASLPLLIGAFV-AEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFG 912 (1253)
Q Consensus 834 ~~~pl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1253)
+.+|++.++.. +..+..+...++.++..++..+++.|.++|+++||+|+.|+.+.++|.+..++..+...+..+..++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (529)
T TIGR02868 161 AGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLG 240 (529)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88787765553 33444455566677778889999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC
Q 000851 913 YGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPD 992 (1253)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~ 992 (1253)
..+..++..+..++.+|+|++++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 320 (529)
T TIGR02868 241 AAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEG 320 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCC
Confidence 88888888888899999999999999999999998888888888888888889999999999999999998765542211
Q ss_pred CCC-CcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCcc
Q 000851 993 DPA-SKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYD 1071 (1253)
Q Consensus 993 ~~~-~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~d 1071 (1253)
... ....++..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|
T Consensus 321 ~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~ 398 (529)
T TIGR02868 321 VVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVS 398 (529)
T ss_pred CCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEE
Confidence 111 11112234679999999999843 369999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1072 IRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1072 i~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
++++ .+++|++|+||||||+||+|||||||.+|.|+++||++++|++.|+++++|.++|+||||++||+|.+|||||||
T Consensus 399 i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQ 477 (529)
T TIGR02868 399 VSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQ 477 (529)
T ss_pred hhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCc
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRL 1203 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl 1203 (1253)
||||||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 478 RiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 478 RLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999988899999999996
No 55
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=4.1e-78 Score=755.72 Aligned_cols=566 Identities=32% Similarity=0.539 Sum_probs=492.1
Q ss_pred HHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 673 LKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMG 752 (1253)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 752 (1253)
+++.++.++.+.+.+++.++.+......++.+..+++..+.... ......+..+++++.++..++.+++.++...++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (576)
T TIGR02204 10 WPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS---SGLLNRYFAFLLVVALVLALGTAARFYLVTWLG 86 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455566666666666666666666777777765442211 111223334444445556667778888899999
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000851 753 EHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVV 832 (1253)
Q Consensus 753 ~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~ 832 (1253)
.++...+|..+++++++.|.++|+. .++|++++|+++|++.+++++...+..++.+++.+++++++++.++|++++++
T Consensus 87 ~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (576)
T TIGR02204 87 ERVVADIRRAVFAHLISLSPSFFDK--NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHcc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999974 67999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000851 833 AASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFG 912 (1253)
Q Consensus 833 l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1253)
++.+|+.++..++..+..++..++..+...+..+.+.|.++|+++||+++.++++.++|.+..++..+...+......+.
T Consensus 165 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 165 LLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99889888888878888888888888888899999999999999999999999999999999999888888888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC
Q 000851 913 YGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPD 992 (1253)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~ 992 (1253)
..+...+.++..++.+++|++++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 77777777777888889999999999999999998888888888999999999999999999999999998755432211
Q ss_pred CCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccC
Q 000851 993 DPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDI 1072 (1253)
Q Consensus 993 ~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di 1072 (1253)
........+..+.|+|+||+|+||.+++.++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++||+|+
T Consensus 325 ~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i 404 (576)
T TIGR02204 325 AHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDL 404 (576)
T ss_pred CCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEH
Confidence 11111111234579999999999854346799999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000851 1073 RTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1073 ~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQr 1152 (1253)
++++.+++|++|+||||||.+|+|||||||.+++|+.++++++++++.++++++++++|+|+||++|++|.+||||||||
T Consensus 405 ~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qr 484 (576)
T TIGR02204 405 RQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQR 484 (576)
T ss_pred HhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHH
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhc
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
++||||++++|+|||||||||+||+++|+.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|++
T Consensus 485 l~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~- 563 (576)
T TIGR02204 485 IAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA- 563 (576)
T ss_pred HHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH-
Confidence 9999999999999999999999999999999999999888999999999999999999999999999999999999998
Q ss_pred ccchHHHHHHHh
Q 000851 1233 ENGIYKQLIRLQ 1244 (1253)
Q Consensus 1233 ~~g~y~~L~~~~ 1244 (1253)
+++.|++|++.|
T Consensus 564 ~~~~~~~l~~~~ 575 (576)
T TIGR02204 564 KGGLYARLARLQ 575 (576)
T ss_pred cCChHHHHHhhc
Confidence 689999999765
No 56
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.5e-78 Score=748.32 Aligned_cols=514 Identities=28% Similarity=0.419 Sum_probs=461.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHH
Q 000851 726 VALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLS 805 (1253)
Q Consensus 726 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~ 805 (1253)
+..+++++.++..++.++..++....+.+...++|.++|++++++|++||+. +++|++++|+++|++.++..+...+.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~g~i~srl~~Dv~~i~~~~~~~~~ 115 (569)
T PRK10789 38 WIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLR--HRTGDLMARATNDVDRVVFAAGEGVL 115 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4444555555666777788888888999999999999999999999999974 78999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcH
Q 000851 806 IIVQNVALTVTAFVIA-FILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIE 884 (1253)
Q Consensus 806 ~~~~~~~~~~~~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e 884 (1253)
.++..++..+++++++ +.++|.+++++++++|+++++.....+..++..++.++...+..+.+.|+++|+++||+|+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e 195 (569)
T PRK10789 116 TLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLE 195 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhccc
Confidence 8877766666665555 589999999999999998888877777777777788888889999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 885 KRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLA 964 (1253)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 964 (1253)
+.+.++|.+..++..+...+..+..+....+.+....+..++.+++|++++..|.++.|.++++..+......++..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~ 275 (569)
T PRK10789 196 DRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAW 275 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888888888877777777777888889999999999999999999999888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCC
Q 000851 965 LAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSG 1044 (1253)
Q Consensus 965 ~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SG 1044 (1253)
.+..+..+..+.+|+.++++.+++.+... .+.++.++.|+|+||+|+|+.. +.++|+|+||+|+|||++|||||||
T Consensus 276 ~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sG 351 (569)
T PRK10789 276 MFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQFTYPQT-DHPALENVNFTLKPGQMLGICGPTG 351 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEEEECCCC-CCccccCeeEEECCCCEEEEECCCC
Confidence 99999999999999999987654322111 1112234679999999999843 3579999999999999999999999
Q ss_pred CcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHH
Q 000851 1045 SGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAH 1124 (1253)
Q Consensus 1045 SGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~ 1124 (1253)
||||||+++|+|+|+|++|+|++||.|+++++.+++|++++||||+|++|++||+|||.++.++.++++++++++.++++
T Consensus 352 sGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~ 431 (569)
T PRK10789 352 SGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVH 431 (569)
T ss_pred CCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred HHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCch
Q 000851 1125 GFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLS 1204 (1253)
Q Consensus 1125 ~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ 1204 (1253)
+++.++|+|+||.+|++|.+||||||||++|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++
T Consensus 432 ~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~ 511 (569)
T PRK10789 432 DDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLS 511 (569)
T ss_pred HHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred hhhccCEEEEEeCCEEEEecChhHHhhcccchHHHHHHHhhc
Q 000851 1205 TIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQD 1246 (1253)
Q Consensus 1205 ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1246 (1253)
++..||+|++|++|+++|.|+|++|++ +++.|++|++.|..
T Consensus 512 ~~~~~d~i~~l~~G~i~~~g~~~~l~~-~~~~y~~l~~~~~~ 552 (569)
T PRK10789 512 ALTEASEILVMQHGHIAQRGNHDQLAQ-QSGWYRDMYRYQQL 552 (569)
T ss_pred HHHcCCEEEEEeCCEEEEecCHHHHHH-cCChHHHHHHHhhh
Confidence 999999999999999999999999998 57999999987754
No 57
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.8e-78 Score=813.58 Aligned_cols=507 Identities=22% Similarity=0.289 Sum_probs=440.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 100 YLVYLGLVALVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALR 179 (1253)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~ 179 (1253)
++++++++..++.++..+++...+.+...++|.++++++++.|++||++ .++|++++|+++|++.+++.+...+..++.
T Consensus 1010 iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~-~~~G~ilnR~s~Di~~id~~l~~~~~~~~~ 1088 (1522)
T TIGR00957 1010 VYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER-TPSGNLVNRFSKELDTVDSMIPPVIKMFMG 1088 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc-CChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556666777777888888899999999999999999999999998 699999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHH
Q 000851 180 YLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIE 259 (1253)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~ 259 (1253)
.++.++++++++++.+|.++++++.++++..++..++.+..+...+..++..+.+.+.+.|+++|+++||+|++|+.+.+
T Consensus 1089 ~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~ 1168 (1522)
T TIGR00957 1089 SLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIH 1168 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHH
Confidence 99999999999998888877766666666666666666777777777777888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 260 SYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVR-HGDTNGGKAFTTIINVIFSGFALGQAAPNLAA 338 (1253)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~-~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~ 338 (1253)
++.+..+...+..........+......++. .++++++|++.+. .|.+++|.+.+++.+......++..+...+..
T Consensus 1169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~ 1245 (1522)
T TIGR00957 1169 QSDLKVDENQKAYYPSIVANRWLAVRLECVG---NCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSE 1245 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888887777666554444444443333332 2334445555554 58899999988888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCC--CCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCc
Q 000851 339 IAKGKAAAANIISIIKENSHSSERPGDDGITLP--KLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSG 416 (1253)
Q Consensus 339 ~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~--~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsG 416 (1253)
+..+.+|.+|+.++++.+++.+ ...+....++ +.+|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||
T Consensus 1246 ~e~~~~s~eRi~~~~~~~~e~~-~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsG 1324 (1522)
T TIGR00957 1246 METNIVAVERLKEYSETEKEAP-WQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAG 1324 (1522)
T ss_pred HHHHHHHHHHHHHHhcCCCCcc-ccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCC
Confidence 9999999999999997765532 1001111111 245889999999999765446999999999999999999999999
Q ss_pred HHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHH
Q 000851 417 KSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSF 496 (1253)
Q Consensus 417 KSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~ 496 (1253)
||||+++|.|+|+|++|+|++||+|+++++.+++|++|++|||||+||+|||||||.... +++++++++|++.++++++
T Consensus 1325 KSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~ 1403 (1522)
T TIGR00957 1325 KSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTF 1403 (1522)
T ss_pred HHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHH
Confidence 999999999999999999999999999999999999999999999999999999998332 5789999999999999999
Q ss_pred HhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhh
Q 000851 497 VEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTV 576 (1253)
Q Consensus 497 i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~ 576 (1253)
+.++|+||||.+||+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++
T Consensus 1404 I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti 1483 (1522)
T TIGR00957 1404 VSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTI 1483 (1522)
T ss_pred HhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998999999999999999
Q ss_pred hhcCEEEEEeCCEEEEeeCcchhhhcCchHHHHHHh
Q 000851 577 RDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNL 612 (1253)
Q Consensus 577 ~~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~~~~ 612 (1253)
.+||+|+||++|+|+|.|+|+||++++|.|+++++.
T Consensus 1484 ~~~DrIlVld~G~IvE~G~~~eLl~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1484 MDYTRVIVLDKGEVAEFGAPSNLLQQRGIFYSMAKD 1519 (1522)
T ss_pred HhCCEEEEEECCEEEEECCHHHHHhCCCHHHHHHHH
Confidence 999999999999999999999999999999999864
No 58
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.4e-78 Score=681.31 Aligned_cols=554 Identities=22% Similarity=0.304 Sum_probs=459.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 49 CVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVAFWMQTGERQTA 128 (1253)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (1253)
+..+.++++++++..+....+..+-|++|..-.-.. ...... +...+..+=.+++...+..|......+....++..
T Consensus 15 ~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag--~~~~f~-~~~p~a~VR~~aI~Rt~~RY~ERlvsH~AtfrvL~ 91 (573)
T COG4987 15 KFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAG--LAYIFN-VMLPSAGVRGLAILRTAARYVERLVSHDATFRVLS 91 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhcc--HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 445667777777766666655556788776522111 000000 11111222334566677788888888889999999
Q ss_pred HHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000851 129 RLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAV-VP 207 (1253)
Q Consensus 129 ~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~-~p 207 (1253)
++|.++|+++...+..-... .++||+++|+..|++.+++.+-..+...+..+..+.+..+.+-+++|.+++.+... ..
T Consensus 92 ~lRv~~f~kl~p~sp~~~~r-~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~~ll~ 170 (573)
T COG4987 92 ALRVRLFEKLEPLSPALLLR-YRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGLILLL 170 (573)
T ss_pred HHHHHHHHhhccCChHHHHh-cChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999987 69999999999999999999988888888888777777777778899988654443 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 208 LIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTY 287 (1253)
Q Consensus 208 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1253)
+++++..++.+..++..++..+..+...+.+.|.+.|....+.||+++.+.+.+.+.-..+.+...|...+.++...+..
T Consensus 171 ~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~ 250 (573)
T COG4987 171 LLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSDAILL 250 (573)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456667777778888888888889999999999999999999999999999999988899999998888888887777
Q ss_pred HHHHHHHH-HHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 000851 288 GLLFCAWA-LLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAA-PNLAAIAKGKAAAANIISIIKENSHSSERPGD 365 (1253)
Q Consensus 288 ~~~~~~~~-~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~-~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~ 365 (1253)
++..+..+ .++|.+ ..+-.|..+.-.+..+++.++....++.-+. ..+....+...|+.|+.++++.+++.. . +
T Consensus 251 l~~g~~v~~~l~w~a-~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~-~-~- 326 (573)
T COG4987 251 LIAGLLVIGLLLWMA-AQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVT-F-P- 326 (573)
T ss_pred HHHHHHHHHHHHHHH-hcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccC-C-C-
Confidence 77666655 445554 3445566653333333333233333444444 456788999999999999999887754 2 1
Q ss_pred CCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCC
Q 000851 366 DGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL 445 (1253)
Q Consensus 366 ~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~ 445 (1253)
+. ..+.....++++||+|+|++.+.++|+|+||++++||++||+|+|||||||++++|.|-|+|++|+|.++|.++..+
T Consensus 327 ~~-~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l 405 (573)
T COG4987 327 DE-QTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASL 405 (573)
T ss_pred cc-ccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhC
Confidence 11 11111127999999999998776799999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 000851 446 QLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 525 (1253)
Q Consensus 446 ~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriai 525 (1253)
+.+.+|+.|++++|.++||++|+|||+.+++|++++|+++++++++++++++++.|+|++|.+||.|..||||||||+||
T Consensus 406 ~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAl 485 (573)
T COG4987 406 DEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLAL 485 (573)
T ss_pred ChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCch
Q 000851 526 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGE 605 (1253)
Q Consensus 526 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~ 605 (1253)
||+|++|+|++||||||.+||++||+++.+.+.+..+|||+|+||||+..++.+|||+||++|+++|+|+|++|++++|.
T Consensus 486 AR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll~~~g~ 565 (573)
T COG4987 486 ARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELLANNGR 565 (573)
T ss_pred HHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhhccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 000851 606 YAALVN 611 (1253)
Q Consensus 606 y~~~~~ 611 (1253)
|+++++
T Consensus 566 ~~~l~q 571 (573)
T COG4987 566 YKRLYQ 571 (573)
T ss_pred HHHHhc
Confidence 999875
No 59
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2e-77 Score=741.41 Aligned_cols=533 Identities=22% Similarity=0.295 Sum_probs=462.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 52 MFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVAFWMQTGERQTARLR 131 (1253)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR 131 (1253)
+++.++++++..++....|+++++++|.+.... + ...+..+...++++.++..++.++..++..+.+.++..++|
T Consensus 8 ~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~-~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 8 FIIVGLFSFVINILMLAPPLYMLQVYDRVLTSG-S----VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-c----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666667777888999999764211 1 11222233334444455667788888999999999999999
Q ss_pred HHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 132 LKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGD-KTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIA 210 (1253)
Q Consensus 132 ~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~ 210 (1253)
.++|+|++++|+. ..+...+++++|++.+++.+.. .+..++..++.++ .++++++++|.+++++++.+|+++
T Consensus 83 ~~~~~~ll~~~~~------~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~ 155 (544)
T TIGR01842 83 QPIFAASFSATLR------RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLV 155 (544)
T ss_pred HHHHHHHhcCccc------CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999983 2355788999999999998877 4555555555444 446789999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 211 VAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLL 290 (1253)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1253)
++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+..+....+..++.
T Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (544)
T TIGR01842 156 GLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFR 235 (544)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778888888888899999999999999999999999999999999999999999998888888888887777777777
Q ss_pred HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCC
Q 000851 291 FCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITL 370 (1253)
Q Consensus 291 ~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~ 370 (1253)
.+..++++++|++++.+|.+|+|++++++.+......|+..+...+..++++.++.+|+.++++.+++.+ + . ...
T Consensus 236 ~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~-~--~--~~~ 310 (544)
T TIGR01842 236 IVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRD-P--A--MPL 310 (544)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccc-C--C--CCC
Confidence 7777888899999999999999999999888888888999999999999999999999999997655422 1 1 111
Q ss_pred CCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHH
Q 000851 371 PKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL 450 (1253)
Q Consensus 371 ~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~ 450 (1253)
+...+.|+++||+|+|++.++++|+|+||+++|||+++||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++
T Consensus 311 ~~~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~ 390 (544)
T TIGR01842 311 PEPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETF 390 (544)
T ss_pred CCCCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHH
Confidence 22346799999999997644569999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000851 451 REQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVL 530 (1253)
Q Consensus 451 r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~ 530 (1253)
|++|+||+|+|++|++|++|||.++.++.++++++++++.++++++++++|+|+||.+|++|.+||||||||++||||++
T Consensus 391 ~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall 470 (544)
T TIGR01842 391 GKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALY 470 (544)
T ss_pred hhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999888778999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhh
Q 000851 531 RNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 531 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
++|++||||||||+||+++++.+.+.|.++. +++|+|+||||+++++.||+|++|++|++++.|+|+|+++
T Consensus 471 ~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 471 GDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred cCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999999999999885 6899999999999999999999999999999999999875
No 60
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-80 Score=679.37 Aligned_cols=491 Identities=30% Similarity=0.420 Sum_probs=440.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000851 117 AFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFA-VGFTSV 195 (1253)
Q Consensus 117 ~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 195 (1253)
.++...++.....+--+.|.|++++++.|+-+ .++|.+...+..-.+-|+..+...+..++..++.+....+ +...++
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~-r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~ 82 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE-RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYG 82 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh-cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence 45566777778888889999999999999987 5899998888888888888888777777777776655444 445679
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000851 196 WQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKS 275 (1253)
Q Consensus 196 ~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~ 275 (1253)
|+.++++++++.+.+++......+.....+...++.+++++...+++-+..+||.|+.|+.+..+|++.++.+.+...|.
T Consensus 83 ~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~ 162 (497)
T COG5265 83 WWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKV 162 (497)
T ss_pred cHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHH
Confidence 99999999888888877766666666677777888999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000851 276 GVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKE 355 (1253)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~ 355 (1253)
....++.......+......++...++..+..|.+|+|+++..-.++.+.+.|+..+...+.++.+++.-.++.+++++.
T Consensus 163 ~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~ 242 (497)
T COG5265 163 HVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDV 242 (497)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhcc
Confidence 77766666666666666777777888899999999999998877778888899999999999999999999999999988
Q ss_pred cCCCCCCCCCCCCCCC-CCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcE
Q 000851 356 NSHSSERPGDDGITLP-KLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGK 434 (1253)
Q Consensus 356 ~~~~~~~~~~~~~~~~-~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 434 (1253)
+.+..+. ++..... ...|.+.|+||+|.|..+ .++|+|+||++++|+++|+|||||+||||++++|.|||++++|.
T Consensus 243 ~~~v~d~--pda~~L~~~~~g~v~F~~V~F~y~~~-r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~ 319 (497)
T COG5265 243 EAEVSDA--PDAPPLWPVRLGAVAFINVSFAYDPR-RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGS 319 (497)
T ss_pred chhhccC--CCCccccccccceEEEEEEEeecccc-chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCce
Confidence 7765522 2222222 345789999999999754 45999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCC
Q 000851 435 ILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 514 (1253)
Q Consensus 435 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 514 (1253)
|.+||+|+++...+++|+.||+||||..||++|+..||.||+|+++++|+..|++.++.++||+.+|+||+|.|||+|-.
T Consensus 320 I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglk 399 (497)
T COG5265 320 ITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLK 399 (497)
T ss_pred EEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEee
Q 000851 515 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 594 (1253)
Q Consensus 515 LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 594 (1253)
||||||||+||||+++++|+||+|||+|||||.+||+.|+.+|++..+|+|+++|+|||+|+-+||.|+||++|+|+|.|
T Consensus 400 lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg 479 (497)
T COG5265 400 LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERG 479 (497)
T ss_pred ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhhcCchHHHHHH
Q 000851 595 THVDLISKGGEYAALVN 611 (1253)
Q Consensus 595 ~~~~l~~~~~~y~~~~~ 611 (1253)
+|+||++++|.|++||.
T Consensus 480 ~h~~ll~~~g~ya~mw~ 496 (497)
T COG5265 480 THEELLAAGGLYAEMWR 496 (497)
T ss_pred cHHHHHHcCChHHHHhc
Confidence 99999999999999985
No 61
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.1e-77 Score=799.78 Aligned_cols=506 Identities=22% Similarity=0.295 Sum_probs=406.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 98 ALYLVYLGLVALVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHA 177 (1253)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~ 177 (1253)
.+++++++++..++.+++.+++...+.+...++|.+++++++++|++||++ .++|++++|+++|++.+++.+...+..+
T Consensus 956 ~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~-~~~G~IlnR~s~Di~~id~~l~~~~~~~ 1034 (1622)
T PLN03130 956 NLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHT-NPLGRIINRFAKDLGDIDRNVAVFVNMF 1034 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhcc-CCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555566667778888888889999999999999999999999999998 6999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHH
Q 000851 178 LRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAV-AGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAK 256 (1253)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~ 256 (1253)
+..++.+++.++++++++|. .++++++++++++ +..++.+..++..+......+...+.+.|+++|+++||+|+.+++
T Consensus 1035 ~~~~~~~i~~~i~i~~~~~~-~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~ 1113 (1622)
T PLN03130 1035 LGQIFQLLSTFVLIGIVSTI-SLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDR 1113 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHH
Confidence 99999999888888888873 3333333333222 223334444555555556667888999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCC---------CChHHHHHHHHHHHHHH
Q 000851 257 AIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLL-FCAWALLLWYAGILVRHGD---------TNGGKAFTTIINVIFSG 326 (1253)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~v~~g~---------lt~g~~~~~~~~~~~~~ 326 (1253)
+.+++.+..+.. .+..........+..+.. .+..+++++.|.+.+..+. .++|.+++ +.+...
T Consensus 1114 f~~~~~~~~~~~----~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls---~~~~~~ 1186 (1622)
T PLN03130 1114 MAEINGRSMDNN----IRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLS---YALNIT 1186 (1622)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHH---HHHHHH
Confidence 666655544443 333333222222221111 1222222233334444332 23343333 333344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCC--CCCCcEEEEEEEEECCCCCCcccccceEEEeCC
Q 000851 327 FALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLP--KLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAG 404 (1253)
Q Consensus 327 ~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~--~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g 404 (1253)
.++..+...+..++.+.+|.+|+.++++.+++.+.. .++..+++ +.+|.|+|+||+|+|+++.++||+|+||+|+||
T Consensus 1187 ~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~-~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~G 1265 (1622)
T PLN03130 1187 SLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLV-IENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPS 1265 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccc-ccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCC
Confidence 455666667778899999999999999876653211 01111111 245789999999999754345999999999999
Q ss_pred CEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHH
Q 000851 405 KTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRV 484 (1253)
Q Consensus 405 ~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~ 484 (1253)
|++||||+||||||||+++|.|+|+|++|+|++||+|+++++.+++|++|++|||||.||+|||||||.++. +++++++
T Consensus 1266 ekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei 1344 (1622)
T PLN03130 1266 EKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADL 1344 (1622)
T ss_pred CEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999986 5789999
Q ss_pred HHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCC
Q 000851 485 IEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNR 564 (1253)
Q Consensus 485 ~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~ 564 (1253)
++|++.+++++|+.++|+||||.+||+|.+|||||||||||||||+++|+|||||||||+||++||+.|++.|++..+++
T Consensus 1345 ~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~ 1424 (1622)
T PLN03130 1345 WESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSC 1424 (1622)
T ss_pred HHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998999
Q ss_pred eEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc-CchHHHHHHhhh
Q 000851 565 TTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK-GGEYAALVNLQS 614 (1253)
Q Consensus 565 t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~y~~~~~~~~ 614 (1253)
|+|+||||++++.+||+|+||++|+|+|.|+|+||+++ +|.|+++++.+.
T Consensus 1425 TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1425 TMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred EEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcC
Confidence 99999999999999999999999999999999999987 689999987643
No 62
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-78 Score=665.78 Aligned_cols=491 Identities=33% Similarity=0.475 Sum_probs=426.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000851 746 YFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTV-TAFVIAFIL 824 (1253)
Q Consensus 746 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~-~~~~~~~~~ 824 (1253)
.++...+....+.+-.+.|.|++++++.|+-. ..+|-+.........-++..+...+...+..++-+. .+.+....+
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~--r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE--RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh--cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 34566777888888999999999999999864 445544433333333344444333443333333332 233445578
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHH
Q 000851 825 SWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALL 904 (1253)
Q Consensus 825 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~ 904 (1253)
+|+.+++.++++.+++++.....-....+.+..+++.+++++...+++-+.+|+|.||.|+++..+|...++.+.+...+
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 99999999999988888777766666677788889999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000851 905 RGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILY 984 (1253)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~ 984 (1253)
.....++.......+...........+...+..+..|.|+++..-.++.....++..+...+.++.++....++.+++++
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 88777777777788888888888888888999999999999988888888888888888889999999999999998887
Q ss_pred ccccCCCCCCCCcccc-cccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCcc
Q 000851 985 RKTAIQPDDPASKEVT-EIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISG 1063 (1253)
Q Consensus 985 ~~~~~~~~~~~~~~~~-~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G 1063 (1253)
.+.+.. +.+..++.+ -..|.|.|+||+|.|. |..|+|+|+||++++|+++||||+||+||||+.++|.||||+++|
T Consensus 242 ~~~~v~-d~pda~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 242 VEAEVS-DAPDAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred cchhhc-cCCCCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 654432 222223333 3457899999999996 467899999999999999999999999999999999999999999
Q ss_pred EEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCC
Q 000851 1064 TVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGV 1143 (1253)
Q Consensus 1064 ~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~ 1143 (1253)
.|.+||.|++++..+.+|+.||+||||..||++|+..|+.||+|+++++|++.|++.|++++||+++|+||||.|||+|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEe
Q 000851 1144 QLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEI 1223 (1253)
Q Consensus 1144 ~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~ 1223 (1253)
.||||||||+||||++|++|+||+||||||+||..||+.||.+|++..+|+|.++|||||+||.+||.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHhhcccchHHHHHH
Q 000851 1224 GSHEQLLRKENGIYKQLIR 1242 (1253)
Q Consensus 1224 Gt~~eLl~~~~g~y~~L~~ 1242 (1253)
|+|+||++ .+|.|++||.
T Consensus 479 g~h~~ll~-~~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLA-AGGLYAEMWR 496 (497)
T ss_pred CcHHHHHH-cCChHHHHhc
Confidence 99999999 5999999995
No 63
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=7.8e-76 Score=726.60 Aligned_cols=527 Identities=23% Similarity=0.329 Sum_probs=457.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 681 PYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVR 760 (1253)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr 760 (1253)
+.+.++++++++.+...+..++.++++++....+... ......+..+++++.++..++.++..++....+.++..++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 3 RALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP--LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666666666667777777777765322111 11233445556666777788889999999999999999999
Q ss_pred HHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000851 761 LSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLI 840 (1253)
Q Consensus 761 ~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~ 840 (1253)
.++|+++++.|..||+ +.++|++++|+++|++.+++.+...+..++.+++..++++++++.++|.+++++++++|+..
T Consensus 81 ~~l~~~l~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~ 158 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQ--GRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIP 158 (529)
T ss_pred HHHHHHHHhCCchhhc--cCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999999999997 48999999999999999999999999999999999999999999999999999999998887
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 841 GAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLS 920 (1253)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (1253)
++.+...+..+...++.++...+..+.+.|+++|+++||+|+.|+++.++|.+..++..+...+..+.......+.+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02857 159 IFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777888888999999999999999999999999999999999998888888887777777777777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccc
Q 000851 921 LCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVT 1000 (1253)
Q Consensus 921 ~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~ 1000 (1253)
.+..++...+++..+..|.+++|.++++..+......++..+...+..+.++..+.+|+.++++.+++.... . ....
T Consensus 239 ~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~-~--~~~~ 315 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGK-A--PVTA 315 (529)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-c--CCCC
Confidence 666666666666666789999999998888888888888999999999999999999999998743221111 1 1111
Q ss_pred cccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHH
Q 000851 1001 EIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL 1080 (1253)
Q Consensus 1001 ~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~l 1080 (1253)
+..+.|+|+||+|+||++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||.|+++++.+++
T Consensus 316 ~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~l 394 (529)
T TIGR02857 316 APAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSW 394 (529)
T ss_pred CCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHH
Confidence 123579999999999853 3479999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000851 1081 RRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 1160 (1253)
Q Consensus 1081 R~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALl 1160 (1253)
|++|+||||||.+|++||||||.++.++.+|++++++++.++++++++++|+||||.+||+|.+||||||||++||||++
T Consensus 395 r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~ 474 (529)
T TIGR02857 395 RDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFL 474 (529)
T ss_pred HhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999998888999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEE
Q 000851 1161 KNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVL 1215 (1253)
Q Consensus 1161 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl 1215 (1253)
++|+|||||||||+||++||+.+++.+++..+++|+|+||||+++++.||+|+||
T Consensus 475 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 475 RDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred cCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999999999999988899999999999999999999986
No 64
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.9e-78 Score=700.26 Aligned_cols=480 Identities=29% Similarity=0.476 Sum_probs=370.9
Q ss_pred cEEEEEEEEECCCCCC--cccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCC----CcEEEECCeeCCCCCHHH
Q 000851 376 QIEFSEVCFAYPSRPH--MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT----SGKILLDGHDLKSLQLKW 449 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~--~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~----~G~i~~~g~~~~~~~~~~ 449 (1253)
-++++|++..|..... .+++||||++.+||++||||+|||||||+++.|+|+.++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 4899999999975433 3999999999999999999999999999999999999987 899999999998888765
Q ss_pred Hh----cccEEEeccCc-cCcc--cHHHHHhc----CCCCC---CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCC
Q 000851 450 LR----EQMGLVSQEPA-LFAT--SIANNILL----GKEDA---SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQL 515 (1253)
Q Consensus 450 ~r----~~i~~v~Q~~~-lf~~--ti~~ni~~----g~~~~---~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~L 515 (1253)
+| +.|+||||+|+ .+|. ||.+-|.= ..+.. ..++..+..+.++ +|+.... ...+.+|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vg-------l~~~~~~--~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVG-------LPDPERR--DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcC-------CCChhhh--ccCCccc
Confidence 54 47999999985 4554 66555542 21111 1223334444443 3332222 4567899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000851 516 SGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVE 592 (1253)
Q Consensus 516 SgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~ 592 (1253)
|||||||+.||+||+.+|++||+||||++||+.++++|.+.|+++. .|.++|+|||++..+.+ ||||+||++|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999986 57899999999999976 89999999999999
Q ss_pred eeCcchhhhcCc-hHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHH
Q 000851 593 SGTHVDLISKGG-EYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWE 671 (1253)
Q Consensus 593 ~g~~~~l~~~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (1253)
.|+.++++++.. .|.+..-
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll------------------------------------------------------------ 255 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLL------------------------------------------------------------ 255 (539)
T ss_pred ecCHHHHHhccCCcccHHHH------------------------------------------------------------
Confidence 999999876421 1100000
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 672 LLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLM 751 (1253)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 751 (1253)
.+
T Consensus 256 -------------------------------------~a----------------------------------------- 257 (539)
T COG1123 256 -------------------------------------AA----------------------------------------- 257 (539)
T ss_pred -------------------------------------hh-----------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000851 752 GEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAV 831 (1253)
Q Consensus 752 ~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv 831 (1253)
.| ..+..+ ..
T Consensus 258 ------------------~p--~~~~~~-~~------------------------------------------------- 267 (539)
T COG1123 258 ------------------VP--RLGDEK-II------------------------------------------------- 267 (539)
T ss_pred ------------------CC--Cccccc-cc-------------------------------------------------
Confidence 00 000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000851 832 VAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGF 911 (1253)
Q Consensus 832 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1253)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 000851 912 GYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQP 991 (1253)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 991 (1253)
..+...+
T Consensus 268 -------------------------------------------------------------------------~~~~~~~ 274 (539)
T COG1123 268 -------------------------------------------------------------------------RLPRRGP 274 (539)
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0000000
Q ss_pred CCCCCcccccccCcEEEEeEEEECCCCC--------CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCcc
Q 000851 992 DDPASKEVTEIKGNIELRNVSFKYPVRP--------DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISG 1063 (1253)
Q Consensus 992 ~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~--------~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G 1063 (1253)
.+...-++++|++.+|..+. ...+++||||++++||++||||+||||||||.++|+|+++|++|
T Consensus 275 --------~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G 346 (539)
T COG1123 275 --------LRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSG 346 (539)
T ss_pred --------cccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCc
Confidence 00112488999999998421 24689999999999999999999999999999999999999999
Q ss_pred EEEECCcc--CCCCCHHHHhcceEEEccCCC--cc-cccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHHhCC
Q 000851 1064 TVLIDGYD--IRTLNLRSLRRKIGLVQQEPA--LF-STTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRMP 1131 (1253)
Q Consensus 1064 ~I~idG~d--i~~i~~~~lR~~i~~V~Qdp~--Lf-~gTIreNl~~g~~---~~~----d~ei~~al~~a~l~~~I~~lp 1131 (1253)
+|.++|.| .+.-+...+|+++-+|+|||+ |- ..||+++|.-... ... .+.+.+.++.+++..-
T Consensus 347 ~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~----- 421 (539)
T COG1123 347 SIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPE----- 421 (539)
T ss_pred eEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHH-----
Confidence 99999977 332235568889999999997 33 3699999863211 111 1224444555555420
Q ss_pred CCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-
Q 000851 1132 EGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN- 1208 (1253)
Q Consensus 1132 ~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~- 1208 (1253)
.+......||||||||+||||||..+|++||+|||||+||+.+.+.|.+.|+++.+ |.|.|+|||+++.++.
T Consensus 422 -----~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i 496 (539)
T COG1123 422 -----FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYI 496 (539)
T ss_pred -----HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhh
Confidence 23344568999999999999999999999999999999999999999999998764 7899999999999987
Q ss_pred cCEEEEEeCCEEEEecChhHHhhcccchHHHHHHH
Q 000851 1209 ADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRL 1243 (1253)
Q Consensus 1209 ~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~~~ 1243 (1253)
||||+||++|+|||.|+.+++.+.+...|.+..-.
T Consensus 497 ~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 497 ADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred CceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 99999999999999999999999888888877644
No 65
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.2e-75 Score=787.15 Aligned_cols=505 Identities=21% Similarity=0.249 Sum_probs=422.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 107 VALVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFV 186 (1253)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~ 186 (1253)
+..++.++..++....+.+...++|.++|+++++.|+.|||+ .++|++++|+++|++.+.+.+...+..++..++.+++
T Consensus 1010 ~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~-~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~ 1088 (1560)
T PTZ00243 1010 LGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT-TPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICS 1088 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC-CCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444455555666778899999999999999999998 6999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHH
Q 000851 187 GFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLK 266 (1253)
Q Consensus 187 ~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~ 266 (1253)
+++++++.+|.+.++++..+.+...+...+.+..+...+......+.+.+.+.|.++|+++||+|+.|+.+.++|.+..+
T Consensus 1089 ~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d 1168 (1560)
T PTZ00243 1089 SILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLD 1168 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHH
Confidence 99999998885443333222233334445556666666666777888999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 267 EALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILV--RHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKA 344 (1253)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 344 (1253)
...+...+......+......++..+..+++.+++.+.+ ..+.+++|.+..++.+......++..+...+..++++..
T Consensus 1169 ~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~ 1248 (1560)
T PTZ00243 1169 VVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMN 1248 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777766555555555555555554444444444433 345578887766666667777889999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCC-------------------------CCCCC---CCCCCCCcEEEEEEEEECCCCCCccccc
Q 000851 345 AAANIISIIKENSHSSERP-------------------------GDDGI---TLPKLAGQIEFSEVCFAYPSRPHMVFEN 396 (1253)
Q Consensus 345 a~~ri~~~l~~~~~~~~~~-------------------------~~~~~---~~~~~~~~i~~~~v~f~y~~~~~~~l~~ 396 (1253)
+.+|++++++..++.+.+. ...+. +..+..|.|+|+||+|+|+++..++|+|
T Consensus 1249 s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~ 1328 (1560)
T PTZ00243 1249 SVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRG 1328 (1560)
T ss_pred HHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeec
Confidence 9999999997433211000 00000 0112347899999999997644459999
Q ss_pred ceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCC
Q 000851 397 LNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGK 476 (1253)
Q Consensus 397 i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~ 476 (1253)
+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|+||||||.||+|||||||..+.
T Consensus 1329 vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~ 1408 (1560)
T PTZ00243 1329 VSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFL 1408 (1560)
T ss_pred ceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred CCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccC-CCEEEEeCcCCCCCHHHHHHHHH
Q 000851 477 EDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRN-PKILLLDEATSALDAESELIVQR 555 (1253)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~-p~ililDE~ts~lD~~~~~~i~~ 555 (1253)
+++++++++|++.+++++++.++|+||||.+||+|.+|||||||||||||||+++ |+|||||||||+||++|++.|++
T Consensus 1409 -~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~ 1487 (1560)
T PTZ00243 1409 -EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQA 1487 (1560)
T ss_pred -CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999999999999996 89999999999999999999999
Q ss_pred HHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc-CchHHHHHHhh
Q 000851 556 ALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK-GGEYAALVNLQ 613 (1253)
Q Consensus 556 ~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~y~~~~~~~ 613 (1253)
.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||+++ ++.|+++++.+
T Consensus 1488 ~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1488 TVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred HHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 99998889999999999999999999999999999999999999985 89999998754
No 66
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.4e-75 Score=788.68 Aligned_cols=509 Identities=22% Similarity=0.300 Sum_probs=407.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 98 ALYLVYLGLVALVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHA 177 (1253)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~ 177 (1253)
...+++++++..++.+++.++....+.+...++|.+++++++++|++||++ .++|++++|+++|++.+++.+...+..+
T Consensus 953 l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~-~~~G~ilnr~s~Di~~id~~l~~~~~~~ 1031 (1495)
T PLN03232 953 IVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHT-NPTGRVINRFSKDIGDIDRNVANLMNMF 1031 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCc-CCchHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 344555666667778888888899999999999999999999999999998 6999999999999999999999988889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHH
Q 000851 178 LRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGG-AYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAK 256 (1253)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~ 256 (1253)
+..++.++++++++++++|.. +++++++++++.... ++.+..++..+......+...+.+.|+++|+++||+|+.+++
T Consensus 1032 ~~~~~~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~ 1110 (1495)
T PLN03232 1032 MNQLWQLLSTFALIGTVSTIS-LWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDR 1110 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHH
Confidence 988888888888887777533 332233333222222 233344445566667778889999999999999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCC----hHHHHH-HHHHHHHHHHHHH
Q 000851 257 AIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRH-GDTN----GGKAFT-TIINVIFSGFALG 330 (1253)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~-g~lt----~g~~~~-~~~~~~~~~~~l~ 330 (1253)
+.+++.+..+...+..........+... .+..+..+++++.|.+.+.. |.+. .+..+. ++.+......++.
T Consensus 1111 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~ 1187 (1495)
T PLN03232 1111 MAKINGKSMDNNIRFTLANTSSNRWLTI---RLETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLS 1187 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHH
Confidence 7776665554444333222111111111 11112222223333444442 3321 122222 2334444556778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCC--CCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEE
Q 000851 331 QAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITL--PKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFA 408 (1253)
Q Consensus 331 ~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~--~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ 408 (1253)
.+...+..++.+.+|.+|+.++++.+++.+.. .....++ .+..|.|+|+||+|+|+++.+++|+|+||+|+|||++|
T Consensus 1188 ~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~-~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~Gekva 1266 (1495)
T PLN03232 1188 GVLRQASKAENSLNSVERVGNYIDLPSEATAI-IENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVG 1266 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-ccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEE
Confidence 88888999999999999999999876653311 0111111 13457899999999996443459999999999999999
Q ss_pred EEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHH
Q 000851 409 FVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAA 488 (1253)
Q Consensus 409 ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~ 488 (1253)
|||+||||||||+++|.|+|+|++|+|.+||+|+++++.+++|++|+||||||.||+|||||||.++. +++++++++|+
T Consensus 1267 IVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al 1345 (1495)
T PLN03232 1267 VVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEAL 1345 (1495)
T ss_pred EECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999986 67899999999
Q ss_pred HHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEE
Q 000851 489 KAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIV 568 (1253)
Q Consensus 489 ~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~ 568 (1253)
+.++++++++++|+|+||.+||+|.+||||||||+||||||+++|+|||||||||+||++||+.|++.|++..+++|+|+
T Consensus 1346 ~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~ 1425 (1495)
T PLN03232 1346 ERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLV 1425 (1495)
T ss_pred HHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred EccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcC-chHHHHHHhh
Q 000851 569 VAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKG-GEYAALVNLQ 613 (1253)
Q Consensus 569 itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~-~~y~~~~~~~ 613 (1253)
||||++++.+||+|+||++|+|+|.|+|+||++++ +.|+++++.+
T Consensus 1426 IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~ 1471 (1495)
T PLN03232 1426 IAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHST 1471 (1495)
T ss_pred EeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 99999999999999999999999999999999986 5899998754
No 67
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.3e-74 Score=714.19 Aligned_cols=535 Identities=23% Similarity=0.337 Sum_probs=456.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 681 PYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVR 760 (1253)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr 760 (1253)
+.+.+.++++++..+.....++.+..+++....... ......+..+++++.++..++.+++.++....+.++..++|
T Consensus 6 ~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 6 STFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS---VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444455444445555666666665432211 11223344455555666777888899999999999999999
Q ss_pred HHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000851 761 LSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADR-LSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLL 839 (1253)
Q Consensus 761 ~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~ 839 (1253)
.++|+++++.|+.. .+...+++++|++.+++.+... +..++..+.. ++.+++++.++|++++++++..|++
T Consensus 83 ~~~~~~ll~~~~~~-------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~l~li~l~~~~l~ 154 (544)
T TIGR01842 83 QPIFAASFSATLRR-------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWM-PIYLLVCFLLHPWIGILALGGAVVL 154 (544)
T ss_pred HHHHHHHhcCcccC-------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHH-HHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999842 2456889999999999988774 4444444444 4445678899999999988888887
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 840 IGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLL 919 (1253)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (1253)
+++.++..+..++..++.++...+..+.+.|+++|+++||+|+.++.+.++|.+..++..+...+..+..+....+..++
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766667777777777888888899999999999999999999999999999999999998888888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCccc
Q 000851 920 SLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEV 999 (1253)
Q Consensus 920 ~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~ 999 (1253)
..+..++.+++|++++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++++.+++..+. .+.
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~~ 310 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MPL 310 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CCC
Confidence 8888888899999999999999999999998888889999999999999999999999999998654432211 111
Q ss_pred ccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH
Q 000851 1000 TEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS 1079 (1253)
Q Consensus 1000 ~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~ 1079 (1253)
++..+.|+++||+|+||+. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||.|+++++.+.
T Consensus 311 ~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~ 389 (544)
T TIGR01842 311 PEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRET 389 (544)
T ss_pred CCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHH
Confidence 2234679999999999743 357999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000851 1080 LRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 1159 (1253)
Q Consensus 1080 lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARAL 1159 (1253)
+|++++||||||.+|++|++|||.++.++.++++++++++.++++++++++|+|+||.+|++|.+||||||||++||||+
T Consensus 390 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARal 469 (544)
T TIGR01842 390 FGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARAL 469 (544)
T ss_pred HhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999987777899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhh
Q 000851 1160 LKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1160 lr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
+++|+|||||||||+||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||++
T Consensus 470 l~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 470 YGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred hcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999999999999875 6899999999999999999999999999999999999986
No 68
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=6.8e-74 Score=709.55 Aligned_cols=535 Identities=17% Similarity=0.164 Sum_probs=447.6
Q ss_pred hHHHHHHHhhc-hhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 000851 35 GSFLSLFAAAD-KIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAW 113 (1253)
Q Consensus 35 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1253)
..+++++++++ +++ ..++++++++++.++.....|++++.++|..... . ... ..+++++.++.+++.+
T Consensus 3 ~~~~~l~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~---~---~~~----~~~~~~~~~~~~~~~~ 71 (555)
T TIGR01194 3 AAIGEILALLRSPFP-AITAFSIALGLAGGLAIIALLASINNAIHEENFL---G---QGS----LFSFGGLCLLALLFRI 71 (555)
T ss_pred chHHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---c---chH----HHHHHHHHHHHHHHHH
Confidence 34678888887 664 4456677777777777777788888887642100 0 011 1123334445567788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 114 IGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFT 193 (1253)
Q Consensus 114 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1253)
+..++....+.++..++|.++|+|++++|+.||++ .++|++++|+++|++.+++++.. ++.++..++.++++++++++
T Consensus 72 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~-~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~ 149 (555)
T TIGR01194 72 GADIFPAYAGMHIIANLRIALCEKILGAPIEEIDR-RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAY 149 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHh-cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999998 59999999999999999999865 77788888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHH--HHHHHHHHHHHHHHHH
Q 000851 194 SVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEA--KAIESYSHSLKEALKQ 271 (1253)
Q Consensus 194 ~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~--~~~~~~~~~~~~~~~~ 271 (1253)
++|.+++++++++|+.+++..++.++.++...+.++..++.++.+.|.+.|++++|+|+.++ .+.++|++..++..+.
T Consensus 150 ~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~ 229 (555)
T TIGR01194 150 LSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADL 229 (555)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999888888888888888888899999999999999999999999999954 5678898888888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 272 GKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIIS 351 (1253)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~ 351 (1253)
..+.........++..++..+...+.+++|++. |.+|+|++++++.+......|+..+...+..++++.++++|+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ 306 (555)
T TIGR01194 230 HIIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLAD 306 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777666655555555555555555556666654 78999999999888888889999999999999999999999999
Q ss_pred HHhccCCCCCC---CCCCCC---CCCCCCCcEEEEEEEEECCCCC---CcccccceEEEeCCCEEEEEcCCCCcHHHHHH
Q 000851 352 IIKENSHSSER---PGDDGI---TLPKLAGQIEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIIS 422 (1253)
Q Consensus 352 ~l~~~~~~~~~---~~~~~~---~~~~~~~~i~~~~v~f~y~~~~---~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ 422 (1253)
+++.+++.+.. +..... ......+.|+++||+|+|++.+ +++|+|+||++++||++|||||||||||||++
T Consensus 307 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ 386 (555)
T TIGR01194 307 FGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAK 386 (555)
T ss_pred HHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHH
Confidence 98642211100 000000 1112246799999999997531 24999999999999999999999999999999
Q ss_pred HHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCC
Q 000851 423 MVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPD 502 (1253)
Q Consensus 423 ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~ 502 (1253)
+|+|+|+|++|+|.+||+|+++++.+++|++++||+||+++|++|+++|+ .+++++++++++++.+++++++..+|+
T Consensus 387 ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~ 463 (555)
T TIGR01194 387 LFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDG 463 (555)
T ss_pred HHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhccccc
Confidence 99999999999999999999999999999999999999999999999995 466788999999999999999999999
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHH-HH-cCCCeEEEEccCchhhhhcC
Q 000851 503 GYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALE-KI-MSNRTTIVVAHRLSTVRDVD 580 (1253)
Q Consensus 503 g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~-~~-~~~~t~i~itH~l~~~~~~d 580 (1253)
||||. .+||||||||++||||++++|+|||||||||+||+++++.+.+.+. .+ .+++|+|+||||+++++.||
T Consensus 464 g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d 538 (555)
T TIGR01194 464 GFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELAD 538 (555)
T ss_pred ccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCC
Confidence 99995 6899999999999999999999999999999999999999988764 34 46899999999999999999
Q ss_pred EEEEEeCCEEEEe
Q 000851 581 TIMVLKNGQVVES 593 (1253)
Q Consensus 581 ~i~vl~~G~i~~~ 593 (1253)
+|++|++|+++|.
T Consensus 539 ~i~~l~~G~i~~~ 551 (555)
T TIGR01194 539 QIIKLAAGCIVKD 551 (555)
T ss_pred EEEEEECCEEEEe
Confidence 9999999999874
No 69
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-75 Score=724.07 Aligned_cols=497 Identities=27% Similarity=0.409 Sum_probs=365.3
Q ss_pred cEEEEEEEEECCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCC----------
Q 000851 376 QIEFSEVCFAYPSR--PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK---------- 443 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~---------- 443 (1253)
-|+++|++++|++. ..++|+||||++++||++|||||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 58999999999632 234999999999999999999999999999999999999999999999997552
Q ss_pred CCCHH---HHh-cccEEEeccC--ccCc-ccHHHHHhcCCC---CCCH----HHHHHHHHHhCcHHHHhcCCCCcccccc
Q 000851 444 SLQLK---WLR-EQMGLVSQEP--ALFA-TSIANNILLGKE---DASM----DRVIEAAKAANAHSFVEGLPDGYQTQVG 509 (1253)
Q Consensus 444 ~~~~~---~~r-~~i~~v~Q~~--~lf~-~ti~~ni~~g~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g 509 (1253)
+.+.. .+| ++||||+|+| .++. .||+||+.++.. ..+. +++.++++..++ ++ .+....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL-------~~-~~~~~~ 163 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRI-------PE-AQTILS 163 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCC-------CC-hhhHHh
Confidence 12222 233 4799999998 5776 499999987521 1122 223333333332 11 012345
Q ss_pred CCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEccCchhhhh-cCEEEEEe
Q 000851 510 EGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-S-NRTTIVVAHRLSTVRD-VDTIMVLK 586 (1253)
Q Consensus 510 ~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~d~i~vl~ 586 (1253)
....+||||||||++|||||+.+|++|||||||++||+.+++.+.+.++++. + |+|+|+|||+++.+.. ||+|++|+
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 5667899999999999999999999999999999999999999999999985 3 7899999999999865 89999999
Q ss_pred CCEEEEeeCcchhhhcCc-hHHH-HHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCC
Q 000851 587 NGQVVESGTHVDLISKGG-EYAA-LVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFA 664 (1253)
Q Consensus 587 ~G~i~~~g~~~~l~~~~~-~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1253)
+|+|++.|+++++..... .|.. +....
T Consensus 244 ~G~i~~~g~~~~~~~~~~~~~~~~l~~~~--------------------------------------------------- 272 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQHPYTRALLAAV--------------------------------------------------- 272 (623)
T ss_pred CCeecccCCHHHhhcCCCChhhhhhhhcc---------------------------------------------------
Confidence 999999998877643210 0100 00000
Q ss_pred CcchHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 665 PSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQ 744 (1253)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 744 (1253)
+......
T Consensus 273 -------------------------------------------------~~~~~~~------------------------ 279 (623)
T PRK10261 273 -------------------------------------------------PQLGAMK------------------------ 279 (623)
T ss_pred -------------------------------------------------Ccccccc------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 745 HYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFIL 824 (1253)
Q Consensus 745 ~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 824 (1253)
.+ ..+-. +... ..
T Consensus 280 --------------------~~--~~~~~-~~~~--~~------------------------------------------ 292 (623)
T PRK10261 280 --------------------GL--DYPRR-FPLI--SL------------------------------------------ 292 (623)
T ss_pred --------------------cc--cCCcc-cccc--cc------------------------------------------
Confidence 00 00000 0000 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHH
Q 000851 825 SWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALL 904 (1253)
Q Consensus 825 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~ 904 (1253)
..
T Consensus 293 --------------------------------------------------------------------------~~---- 294 (623)
T PRK10261 293 --------------------------------------------------------------------------EH---- 294 (623)
T ss_pred --------------------------------------------------------------------------cc----
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000851 905 RGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILY 984 (1253)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~ 984 (1253)
+ + ..
T Consensus 295 --------------------------------------------------------------~----------~----~~ 298 (623)
T PRK10261 295 --------------------------------------------------------------P----------A----KQ 298 (623)
T ss_pred --------------------------------------------------------------c----------c----cc
Confidence 0 0 00
Q ss_pred ccccCCCCCCCCcccccccCcEEEEeEEEECCCCC--------CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhc
Q 000851 985 RKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRP--------DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMR 1056 (1253)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~--------~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r 1056 (1253)
.+.......+ ....-++++||+++|+.+. ..++|+||||+|++||++||+|+||||||||+++|+|
T Consensus 299 ~~~~~~~~~~------~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~G 372 (623)
T PRK10261 299 EPPIEQDTVV------DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLR 372 (623)
T ss_pred Cccccccccc------CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHc
Confidence 0000000000 0012499999999996321 2469999999999999999999999999999999999
Q ss_pred cCCCCccEEEECCccCCCCCHH---HHhcceEEEccCCC--ccc-ccHHHHhccCC--CC-CCH----HHHHHHHHHhcH
Q 000851 1057 FYDPISGTVLIDGYDIRTLNLR---SLRRKIGLVQQEPA--LFS-TTIYENIKYGN--ED-ASE----IELMKATKAANA 1123 (1253)
Q Consensus 1057 ~~~p~~G~I~idG~di~~i~~~---~lR~~i~~V~Qdp~--Lf~-gTIreNl~~g~--~~-~~d----~ei~~al~~a~l 1123 (1253)
+++|++|+|.++|.++...+.. .+|++|+||||+|. +++ .|+.+|+.++. .. ... +++.+.++..++
T Consensus 373 l~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL 452 (623)
T PRK10261 373 LVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGL 452 (623)
T ss_pred CCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCC
Confidence 9999999999999999877643 46789999999983 665 59999997531 01 111 234445555554
Q ss_pred H-HHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEc
Q 000851 1124 H-GFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVA 1200 (1253)
Q Consensus 1124 ~-~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~Ia 1200 (1253)
. +.. .....+||||||||++|||||+.+|+|||||||||+||+.+.+.|.+.|++..+ +.|+|+||
T Consensus 453 ~~~~~-----------~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~is 521 (623)
T PRK10261 453 LPEHA-----------WRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFIS 521 (623)
T ss_pred CHHHh-----------hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 2 222 233457999999999999999999999999999999999999999999998753 78999999
Q ss_pred cCchhhhc-cCEEEEEeCCEEEEecChhHHhhcccchHHH-HHH
Q 000851 1201 HRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKENGIYKQ-LIR 1242 (1253)
Q Consensus 1201 Hrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~-L~~ 1242 (1253)
|+++.+.. ||+|+||++|+|+|.|++++++..+...|.+ ++.
T Consensus 522 Hdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 522 HDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred CCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 99999976 9999999999999999999998755556654 443
No 70
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-75 Score=711.13 Aligned_cols=462 Identities=22% Similarity=0.408 Sum_probs=357.5
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC--CCcEEEECCeeCCCCCHHH-Hhc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP--TSGKILLDGHDLKSLQLKW-LRE 452 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~~~~~~~~~-~r~ 452 (1253)
-|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+... .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 4899999999974 3499999999999999999999999999999999999996 8999999999998766543 467
Q ss_pred ccEEEeccCccCcc-cHHHHHhcCCCC-----CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 453 QMGLVSQEPALFAT-SIANNILLGKED-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 453 ~i~~v~Q~~~lf~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
.+|||+|++.+|.. |++||+.++... .+.++..+ .+.+.++.+ |++........+||||||||++||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la 155 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQL--KLDINPATPVGNLGLGQQQLVEIA 155 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHHHHH
Confidence 89999999988865 999999987431 12222111 122333333 444444556678999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcCc
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGG 604 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 604 (1253)
|||+.+|++||||||||+||+.+...+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 156 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-- 233 (506)
T PRK13549 156 KALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED-- 233 (506)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH--
Confidence 99999999999999999999999999999999874 47899999999999875 899999999999988764332100
Q ss_pred hHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHHHHHHhhchhHHHH
Q 000851 605 EYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAV 684 (1253)
Q Consensus 605 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1253)
+..
T Consensus 234 ---~~~-------------------------------------------------------------------------- 236 (506)
T PRK13549 234 ---DII-------------------------------------------------------------------------- 236 (506)
T ss_pred ---HHH--------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 685 LGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMF 764 (1253)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 764 (1253)
..
T Consensus 237 ------------------------~~------------------------------------------------------ 238 (506)
T PRK13549 237 ------------------------TM------------------------------------------------------ 238 (506)
T ss_pred ------------------------HH------------------------------------------------------
Confidence 00
Q ss_pred HHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000851 765 SAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFV 844 (1253)
Q Consensus 765 ~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~ 844 (1253)
. +..+ .
T Consensus 239 --~-------~~~~---~-------------------------------------------------------------- 244 (506)
T PRK13549 239 --M-------VGRE---L-------------------------------------------------------------- 244 (506)
T ss_pred --h-------hCcC---c--------------------------------------------------------------
Confidence 0 0000 0
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 845 AEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSY 924 (1253)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (1253)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccC
Q 000851 925 ALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKG 1004 (1253)
Q Consensus 925 ~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g 1004 (1253)
.+ ..+..... ..+.
T Consensus 245 ----------------------------------------------------~~------~~~~~~~~--------~~~~ 258 (506)
T PRK13549 245 ----------------------------------------------------TA------LYPREPHT--------IGEV 258 (506)
T ss_pred ----------------------------------------------------cc------cccccccC--------CCCc
Confidence 00 00000000 0012
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-CCccEEEECCccCCCCCH-HHHhc
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-PISGTVLIDGYDIRTLNL-RSLRR 1082 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-p~~G~I~idG~di~~i~~-~~lR~ 1082 (1253)
.|+++||+++|+.+.+.++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++...+. +.+|+
T Consensus 259 ~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~ 338 (506)
T PRK13549 259 ILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQ 338 (506)
T ss_pred eEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHC
Confidence 4899999999953223469999999999999999999999999999999999999 599999999999875543 45678
Q ss_pred ceEEEccCC---Cccc-ccHHHHhccCCC-C------CCHHHHHHHHHHhcHHHHHHhCCCCccc-cccCCCCCCChhHH
Q 000851 1083 KIGLVQQEP---ALFS-TTIYENIKYGNE-D------ASEIELMKATKAANAHGFISRMPEGYQS-HVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1083 ~i~~V~Qdp---~Lf~-gTIreNl~~g~~-~------~~d~ei~~al~~a~l~~~I~~lp~gldt-~vge~G~~LSgGQk 1150 (1253)
+++||||+| .+|+ .|+.||+.++.. . .+.++ ....+.++++.+ |++. ........||||||
T Consensus 339 ~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~~LSgG~k 411 (506)
T PRK13549 339 GIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAA-----ELKTILESIQRL--KVKTASPELAIARLSGGNQ 411 (506)
T ss_pred CCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHH-----HHHHHHHHHHhc--CccCCCcccccccCCHHHH
Confidence 899999997 3554 699999986421 0 01111 111233444444 3321 23444567999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1228 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~e 1228 (1253)
||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +|+|||+|||+++.+.. ||++++|++|+++..|++++
T Consensus 412 qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~ 491 (506)
T PRK13549 412 QKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLINHN 491 (506)
T ss_pred HHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEecccc
Confidence 99999999999999999999999999999999999999864 48999999999999866 99999999999999999887
Q ss_pred Hh
Q 000851 1229 LL 1230 (1253)
Q Consensus 1229 Ll 1230 (1253)
+.
T Consensus 492 ~~ 493 (506)
T PRK13549 492 LT 493 (506)
T ss_pred CC
Confidence 64
No 71
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.6e-74 Score=708.47 Aligned_cols=464 Identities=27% Similarity=0.453 Sum_probs=355.8
Q ss_pred cEEEEEEEEECCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCCCCHH
Q 000851 376 QIEFSEVCFAYPSR--PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSLQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~ 448 (1253)
-|+++|++++|++. ...+|+|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 23599999999999999999999999999999999999987 799999999999876643
Q ss_pred H---Hh-cccEEEeccCc--cCc-ccHHHHHhcCC---CCCC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCC
Q 000851 449 W---LR-EQMGLVSQEPA--LFA-TSIANNILLGK---EDAS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 514 (1253)
Q Consensus 449 ~---~r-~~i~~v~Q~~~--lf~-~ti~~ni~~g~---~~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 514 (1253)
. +| ++||||+|++. ++. .|+++|+.++. ...+ .+++.++++..++.+.. ........+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCCcc
Confidence 2 33 57999999985 444 48999986421 0111 12344444444432210 112345568
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 000851 515 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVV 591 (1253)
Q Consensus 515 LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~ 591 (1253)
||||||||++|||||+.+|++||||||||+||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999875 37899999999999875 8999999999999
Q ss_pred EeeCcchhhhcCchHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHH
Q 000851 592 ESGTHVDLISKGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWE 671 (1253)
Q Consensus 592 ~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (1253)
+.|+.+++..... ....
T Consensus 237 ~~g~~~~~~~~~~--------------------------------------------------------------~~~~- 253 (529)
T PRK15134 237 EQNRAATLFSAPT--------------------------------------------------------------HPYT- 253 (529)
T ss_pred EeCCHHHHhhCCC--------------------------------------------------------------CHHH-
Confidence 9887655432100 0000
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 672 LLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLM 751 (1253)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 751 (1253)
.
T Consensus 254 ---------------------------------------------~---------------------------------- 254 (529)
T PRK15134 254 ---------------------------------------------Q---------------------------------- 254 (529)
T ss_pred ---------------------------------------------H----------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000851 752 GEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAV 831 (1253)
Q Consensus 752 ~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv 831 (1253)
.+...+ .
T Consensus 255 --------------~~~~~~------~----------------------------------------------------- 261 (529)
T PRK15134 255 --------------KLLNSE------P----------------------------------------------------- 261 (529)
T ss_pred --------------HHHHhC------c-----------------------------------------------------
Confidence 000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000851 832 VAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGF 911 (1253)
Q Consensus 832 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1253)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 000851 912 GYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQP 991 (1253)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 991 (1253)
...+. ..
T Consensus 262 ------------------------------------------------------------------------~~~~~-~~ 268 (529)
T PRK15134 262 ------------------------------------------------------------------------SGDPV-PL 268 (529)
T ss_pred ------------------------------------------------------------------------ccccc-cc
Confidence 00000 00
Q ss_pred CCCCCcccccccCcEEEEeEEEECCCC--------CCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCcc
Q 000851 992 DDPASKEVTEIKGNIELRNVSFKYPVR--------PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISG 1063 (1253)
Q Consensus 992 ~~~~~~~~~~~~g~I~~~~Vsf~Y~~~--------~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G 1063 (1253)
. .. .+.-|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|++ |++|
T Consensus 269 ~-~~------~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~~~G 340 (529)
T PRK15134 269 P-EP------ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI-NSQG 340 (529)
T ss_pred C-CC------CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-CCCc
Confidence 0 00 01148999999999621 1246999999999999999999999999999999999999 4899
Q ss_pred EEEECCccCCCCCHHH---HhcceEEEccCCC--ccc-ccHHHHhccCCC----CCC----HHHHHHHHHHhcHHHHHHh
Q 000851 1064 TVLIDGYDIRTLNLRS---LRRKIGLVQQEPA--LFS-TTIYENIKYGNE----DAS----EIELMKATKAANAHGFISR 1129 (1253)
Q Consensus 1064 ~I~idG~di~~i~~~~---lR~~i~~V~Qdp~--Lf~-gTIreNl~~g~~----~~~----d~ei~~al~~a~l~~~I~~ 1129 (1253)
+|++||.++...+... +|++++||||++. +|+ .|++||+.++.. ..+ ++.+.++++..++.+
T Consensus 341 ~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~---- 416 (529)
T PRK15134 341 EIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDP---- 416 (529)
T ss_pred EEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCH----
Confidence 9999999998776543 5788999999983 665 599999986421 011 122334444444321
Q ss_pred CCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhh
Q 000851 1130 MPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR 1207 (1253)
Q Consensus 1130 lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~ 1207 (1253)
........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.
T Consensus 417 ------~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~ 490 (529)
T PRK15134 417 ------ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVR 490 (529)
T ss_pred ------HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHH
Confidence 122334467999999999999999999999999999999999999999999998753 789999999999987
Q ss_pred c-cCEEEEEeCCEEEEecChhHHhhcc
Q 000851 1208 N-ADKIAVLQQGKVAEIGSHEQLLRKE 1233 (1253)
Q Consensus 1208 ~-~D~I~Vl~~G~ive~Gt~~eLl~~~ 1233 (1253)
. ||+|++|++|++++.|+++++++.+
T Consensus 491 ~~~d~i~~l~~G~i~~~~~~~~~~~~~ 517 (529)
T PRK15134 491 ALCHQVIVLRQGEVVEQGDCERVFAAP 517 (529)
T ss_pred HhcCeEEEEECCEEEEEcCHHHHhcCC
Confidence 5 9999999999999999999998643
No 72
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-73 Score=702.05 Aligned_cols=459 Identities=21% Similarity=0.385 Sum_probs=351.7
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH-Hhccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 454 (1253)
-|+++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++|
T Consensus 5 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGPV--HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCCe--EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 48999999999743 4999999999999999999999999999999999999999999999999998776554 34679
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCCC---------CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 455 GLVSQEPALFAT-SIANNILLGKEDA---------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~~---------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
+||+|++.++.. |++||+.++.... ..++..+ .+.+.++.+ |+.........+||||||||++
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv~ 155 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV-----RAAMMLLRV--GLKVDLDEKVANLSISHKQMLE 155 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHHH
Confidence 999999988875 9999998764210 1111111 112233333 3433345556789999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 156 ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 235 (510)
T PRK09700 156 IAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSND 235 (510)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCHH
Confidence 9999999999999999999999999999999999875 47899999999999875 899999999999988765543210
Q ss_pred CchHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHHHHHHhhchhHH
Q 000851 603 GGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPY 682 (1253)
Q Consensus 603 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1253)
++..
T Consensus 236 -----~~~~----------------------------------------------------------------------- 239 (510)
T PRK09700 236 -----DIVR----------------------------------------------------------------------- 239 (510)
T ss_pred -----HHHH-----------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 683 AVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLS 762 (1253)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 762 (1253)
.
T Consensus 240 ---------------------------~---------------------------------------------------- 240 (510)
T PRK09700 240 ---------------------------L---------------------------------------------------- 240 (510)
T ss_pred ---------------------------H----------------------------------------------------
Confidence 0
Q ss_pred HHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000851 763 MFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGA 842 (1253)
Q Consensus 763 ~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~ 842 (1253)
+ +.....
T Consensus 241 ----~-------~~~~~~-------------------------------------------------------------- 247 (510)
T PRK09700 241 ----M-------VGRELQ-------------------------------------------------------------- 247 (510)
T ss_pred ----h-------cCCCcc--------------------------------------------------------------
Confidence 0 000000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 843 FVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLC 922 (1253)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1253)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccc
Q 000851 923 SYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEI 1002 (1253)
Q Consensus 923 ~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1253)
.+ .....+. +..+. .
T Consensus 248 ------------------------------------------------------~~---~~~~~~~--~~~~~------~ 262 (510)
T PRK09700 248 ------------------------------------------------------NR---FNAMKEN--VSNLA------H 262 (510)
T ss_pred ------------------------------------------------------cc---ccccccc--cccCC------C
Confidence 00 0000000 00000 0
Q ss_pred cCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCH-HHHh
Q 000851 1003 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL-RSLR 1081 (1253)
Q Consensus 1003 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~-~~lR 1081 (1253)
+..|+++|+++.|. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 263 ~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~ 337 (510)
T PRK09700 263 ETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVK 337 (510)
T ss_pred CcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHH
Confidence 12499999998762 28999999999999999999999999999999999999999999999999876554 4567
Q ss_pred cceEEEccCC---Cccc-ccHHHHhccCCCC-----------CCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCC
Q 000851 1082 RKIGLVQQEP---ALFS-TTIYENIKYGNED-----------ASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQL 1145 (1253)
Q Consensus 1082 ~~i~~V~Qdp---~Lf~-gTIreNl~~g~~~-----------~~d~ei~~al~~a~l~~~I~~lp~gld-t~vge~G~~L 1145 (1253)
++++||||++ .+|+ -|++||+.++... ....+. ...+.+.++.+ |+. .........|
T Consensus 338 ~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~L 410 (510)
T PRK09700 338 KGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDE-----QRTAENQRELL--ALKCHSVNQNITEL 410 (510)
T ss_pred CCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHH-----HHHHHHHHHhc--CCCCCCccCccccC
Confidence 8999999984 5675 5999999875210 011110 11123333333 232 1233444579
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEe
Q 000851 1146 SGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEI 1223 (1253)
Q Consensus 1146 SgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~ 1223 (1253)
|||||||++|||||+.+|+|||||||||+||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 411 SgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~ 490 (510)
T PRK09700 411 SGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQI 490 (510)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999999864 58899999999998865 999999999999998
Q ss_pred cChhH
Q 000851 1224 GSHEQ 1228 (1253)
Q Consensus 1224 Gt~~e 1228 (1253)
+++.+
T Consensus 491 ~~~~~ 495 (510)
T PRK09700 491 LTNRD 495 (510)
T ss_pred ecCcc
Confidence 87633
No 73
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.2e-73 Score=701.61 Aligned_cols=453 Identities=26% Similarity=0.483 Sum_probs=345.9
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccC--CCCCcEEEEC----------------
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLY--EPTSGKILLD---------------- 438 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~~~---------------- 438 (1253)
|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG--KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC--eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 578999999964 34999999999999999999999999999999999996 7999999997
Q ss_pred -------CeeCC-------CCC---HHHHhcccEEEecc-CccCcc-cHHHHHhcCCCC--CCH----HHHHHHHHHhCc
Q 000851 439 -------GHDLK-------SLQ---LKWLREQMGLVSQE-PALFAT-SIANNILLGKED--ASM----DRVIEAAKAANA 493 (1253)
Q Consensus 439 -------g~~~~-------~~~---~~~~r~~i~~v~Q~-~~lf~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~ 493 (1253)
|.++. ..+ ...+|+.++||+|+ +.+|+. |++||+.++... ... +++.++++..+
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g- 157 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQ- 157 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-
Confidence 33331 111 13457789999998 577764 999999875321 121 22333344443
Q ss_pred HHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEcc
Q 000851 494 HSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAH 571 (1253)
Q Consensus 494 ~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH 571 (1253)
++........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|+|||
T Consensus 158 ----------l~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtH 227 (520)
T TIGR03269 158 ----------LSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSH 227 (520)
T ss_pred ----------ChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeC
Confidence 3333344567899999999999999999999999999999999999999999999884 3789999999
Q ss_pred Cchhhhh-cCEEEEEeCCEEEEeeCcchhhhcCchHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhh
Q 000851 572 RLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFES 650 (1253)
Q Consensus 572 ~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (1253)
+++.+.. ||+|++|++|+++..|+++++... |
T Consensus 228 d~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~---~-------------------------------------------- 260 (520)
T TIGR03269 228 WPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV---F-------------------------------------------- 260 (520)
T ss_pred CHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH---H--------------------------------------------
Confidence 9999865 899999999999876654322100 0
Q ss_pred hhhhhhccccCCCCCcchHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHH
Q 000851 651 SKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIF 730 (1253)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1253)
T Consensus 261 -------------------------------------------------------------------------------- 260 (520)
T TIGR03269 261 -------------------------------------------------------------------------------- 260 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000851 731 VGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQN 810 (1253)
Q Consensus 731 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~ 810 (1253)
...
T Consensus 261 --------------------------------------------~~~--------------------------------- 263 (520)
T TIGR03269 261 --------------------------------------------MEG--------------------------------- 263 (520)
T ss_pred --------------------------------------------Hhh---------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHH
Q 000851 811 VALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQ 890 (1253)
Q Consensus 811 ~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~ 890 (1253)
+ .
T Consensus 264 ---------------~------------------------~--------------------------------------- 265 (520)
T TIGR03269 264 ---------------V------------------------S--------------------------------------- 265 (520)
T ss_pred ---------------c------------------------h---------------------------------------
Confidence 0 0
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 891 FASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIV 970 (1253)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 (1253)
..
T Consensus 266 -----------------------------------------------------------------------------~~- 267 (520)
T TIGR03269 266 -----------------------------------------------------------------------------EV- 267 (520)
T ss_pred -----------------------------------------------------------------------------hh-
Confidence 00
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCCCcccccccCcEEEEeEEEECCC--CCCcccccceeEEEeCCcEEEEEcCCCCcHH
Q 000851 971 KGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPV--RPDITIFENLNLKVSAGRSLAVVGQSGSGKS 1048 (1253)
Q Consensus 971 ~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~--~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKS 1048 (1253)
.... + .+. ....|+++||+++|+. +...++|+|+||+|++||++||+||||||||
T Consensus 268 -------------~~~~---~-~~~------~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKS 324 (520)
T TIGR03269 268 -------------EKEC---E-VEV------GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKT 324 (520)
T ss_pred -------------cccc---c-cCC------CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHH
Confidence 0000 0 000 0124999999999963 1224699999999999999999999999999
Q ss_pred HHHHHHhccCCCCccEEEEC-Ccc---CCCCC---HHHHhcceEEEccCCCccc-ccHHHHhccCCC-CCC----HHHHH
Q 000851 1049 TVISLVMRFYDPISGTVLID-GYD---IRTLN---LRSLRRKIGLVQQEPALFS-TTIYENIKYGNE-DAS----EIELM 1115 (1253)
Q Consensus 1049 TL~~lL~r~~~p~~G~I~id-G~d---i~~i~---~~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~-~~~----d~ei~ 1115 (1253)
||+++|+|+++|++|+|.++ |.+ +...+ ...+|++++||||++.+|+ .|++||+.++.. ... ++++.
T Consensus 325 TLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 404 (520)
T TIGR03269 325 TLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAV 404 (520)
T ss_pred HHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99999999999999999996 643 33333 2346778999999998887 599999975311 111 12233
Q ss_pred HHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-C-C
Q 000851 1116 KATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-E-G 1193 (1253)
Q Consensus 1116 ~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~-~ 1193 (1253)
++++..++.+. ..+........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. + +
T Consensus 405 ~~l~~~~l~~~------~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g 478 (520)
T TIGR03269 405 ITLKMVGFDEE------KAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEME 478 (520)
T ss_pred HHHHhCCCCCc------cchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC
Confidence 34444433210 00001234456799999999999999999999999999999999999999999999874 3 7
Q ss_pred ceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1194 RTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1194 ~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 479 ~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 479 QTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred cEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 899999999999876 99999999999999999998865
No 74
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.9e-70 Score=737.32 Aligned_cols=503 Identities=18% Similarity=0.223 Sum_probs=412.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 107 VALVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFV 186 (1253)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~ 186 (1253)
+..++.+++.+++.+.+.+...++|.++++++++.|+.||++ .++|++++|+++|++.+.+.+...+..++..++.+++
T Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~-~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~ 1015 (1490)
T TIGR01271 937 SVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT-MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLG 1015 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566677778888899999999999999999999999998 6999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHH
Q 000851 187 GFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLK 266 (1253)
Q Consensus 187 ~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~ 266 (1253)
.++++++++|.+.++++..+.+++++..++.+..+...+......+.+.+.+.|+++|+.+||+|++++.+.++|.+..+
T Consensus 1016 ~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~ 1095 (1490)
T TIGR01271 1016 AIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALN 1095 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHH
Confidence 99999999998766444433333444455555556666666777788899999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 267 EALKQGKKSGVAKGIGVGLTYGLLFCAW--ALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKA 344 (1253)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 344 (1253)
...+..........+......++..+.. +++++++.. ..+.|.+..++.+.+....++..+...+..+..+..
T Consensus 1096 ~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~ 1170 (1490)
T TIGR01271 1096 LHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMR 1170 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6544433332222222222222221111 112222322 234444444444455555677778888889999999
Q ss_pred HHHHHHHHHhccCCCCCCCCCC-------------CCCCC--CCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEE
Q 000851 345 AAANIISIIKENSHSSERPGDD-------------GITLP--KLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAF 409 (1253)
Q Consensus 345 a~~ri~~~l~~~~~~~~~~~~~-------------~~~~~--~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~i 409 (1253)
|.+|+.++++.+++........ ...++ +..|.|+|+||+|+|+...+++|+|+||+|+|||++||
T Consensus 1171 s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaI 1250 (1490)
T TIGR01271 1171 SVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGL 1250 (1490)
T ss_pred HHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEE
Confidence 9999999997765532110000 00011 23578999999999975445699999999999999999
Q ss_pred EcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHH
Q 000851 410 VGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAK 489 (1253)
Q Consensus 410 vG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~ 489 (1253)
||+||||||||+++|+|+|+ ++|+|++||+|+++++.+.+|++|+||||||.||+||||+||.... ..+++++++|++
T Consensus 1251 vGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~aL~ 1328 (1490)
T TIGR01271 1251 LGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWKVAE 1328 (1490)
T ss_pred ECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHHHHH
Confidence 99999999999999999997 8999999999999999999999999999999999999999997653 568999999999
Q ss_pred HhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEE
Q 000851 490 AANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVV 569 (1253)
Q Consensus 490 ~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i 569 (1253)
.+++++++.++|+|+||.+||+|.+||||||||++|||||+++|+|||||||||+||++|++.|++.|++..+++|+|+|
T Consensus 1329 ~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~I 1408 (1490)
T TIGR01271 1329 EVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILS 1408 (1490)
T ss_pred HCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999899999999
Q ss_pred ccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCchHHHHHHhhhccc
Q 000851 570 AHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSSEH 617 (1253)
Q Consensus 570 tH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~~~~~~~~~ 617 (1253)
|||++++..+|+|+||++|+|+|.|+|++|+++++.|+++++.+....
T Consensus 1409 aHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~~~~ 1456 (1490)
T TIGR01271 1409 EHRVEALLECQQFLVIEGSSVKQYDSIQKLLNETSLFKQAMSAADRLK 1456 (1490)
T ss_pred ecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcCCcHHHHHHHHhChhc
Confidence 999999999999999999999999999999998999999987665443
No 75
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=7.6e-73 Score=693.05 Aligned_cols=454 Identities=23% Similarity=0.391 Sum_probs=351.6
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH-Hhccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 454 (1253)
-|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 3899999999974 34999999999999999999999999999999999999999999999999987655443 45689
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 455 GLVSQEPALFAT-SIANNILLGKED------ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
+||+|++.++.. |++||+.++... .+.++..+ .+.+.++.+ |+.........+||||||||++|||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 154 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARL--NLRFSSDKLVGELSIGEQQMVEIAK 154 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHH
Confidence 999999988865 999999986431 11121111 112233333 3433344556789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcCch
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGE 605 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~ 605 (1253)
||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~--- 231 (501)
T PRK10762 155 VLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED--- 231 (501)
T ss_pred HHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH---
Confidence 9999999999999999999999999999999874 47899999999999865 899999999999987754332100
Q ss_pred HHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHHHHHHhhchhHHHHH
Q 000851 606 YAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVL 685 (1253)
Q Consensus 606 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (1253)
.+.
T Consensus 232 --~~~--------------------------------------------------------------------------- 234 (501)
T PRK10762 232 --SLI--------------------------------------------------------------------------- 234 (501)
T ss_pred --HHH---------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 686 GSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFS 765 (1253)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~ 765 (1253)
...
T Consensus 235 -----------------------~~~------------------------------------------------------ 237 (501)
T PRK10762 235 -----------------------EMM------------------------------------------------------ 237 (501)
T ss_pred -----------------------HHh------------------------------------------------------
Confidence 000
Q ss_pred HHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000851 766 AILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVA 845 (1253)
Q Consensus 766 ~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~ 845 (1253)
+... .
T Consensus 238 ---------~~~~---~--------------------------------------------------------------- 242 (501)
T PRK10762 238 ---------VGRK---L--------------------------------------------------------------- 242 (501)
T ss_pred ---------cCCC---c---------------------------------------------------------------
Confidence 0000 0
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 846 EQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYA 925 (1253)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1253)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccCc
Q 000851 926 LGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGN 1005 (1253)
Q Consensus 926 ~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~ 1005 (1253)
. ...+.. +. + +.+..
T Consensus 243 ---------------------------------------------------~------~~~~~~-~~-~------~~~~~ 257 (501)
T PRK10762 243 ---------------------------------------------------E------DQYPRL-DK-A------PGEVR 257 (501)
T ss_pred ---------------------------------------------------c------cccccc-cc-C------CCCcE
Confidence 0 000000 00 0 00114
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCH-HHHhcce
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL-RSLRRKI 1084 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~-~~lR~~i 1084 (1253)
|+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. +.+|+++
T Consensus 258 l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i 329 (501)
T PRK10762 258 LKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGI 329 (501)
T ss_pred EEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCC
Confidence 88999984 26999999999999999999999999999999999999999999999999987665 3567889
Q ss_pred EEEccCC---Ccc-cccHHHHhccCCCC--------CCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChhHHH
Q 000851 1085 GLVQQEP---ALF-STTIYENIKYGNED--------ASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1085 ~~V~Qdp---~Lf-~gTIreNl~~g~~~--------~~d~ei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSgGQkQ 1151 (1253)
+||||+| .+| ..|++||+.++... .+..+. ...+.++++.+ |+. .........|||||||
T Consensus 330 ~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~LSgGekq 402 (501)
T PRK10762 330 VYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADE-----QQAVSDFIRLF--NIKTPSMEQAIGLLSGGNQQ 402 (501)
T ss_pred EEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHH-----HHHHHHHHHhc--CCCCCCccCchhhCCHHHHH
Confidence 9999997 354 46999999864210 111111 11223344443 332 2344555679999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 403 rv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 482 (501)
T PRK10762 403 KVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTREQA 482 (501)
T ss_pred HHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccccC
Confidence 9999999999999999999999999999999999999975 48899999999999866 999999999999999998776
Q ss_pred h
Q 000851 1230 L 1230 (1253)
Q Consensus 1230 l 1230 (1253)
.
T Consensus 483 ~ 483 (501)
T PRK10762 483 T 483 (501)
T ss_pred C
Confidence 4
No 76
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.4e-70 Score=679.96 Aligned_cols=534 Identities=19% Similarity=0.188 Sum_probs=436.9
Q ss_pred hHHHHHHHhh-chhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 668 SIWELLKLNA-AEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHY 746 (1253)
Q Consensus 668 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 746 (1253)
.+++++++.+ +.++.++++++++++.++.....+..+..++...... . . .....++++.++..++.++..+
T Consensus 4 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-~----~---~~~~~~~~~~~~~~~~~~~~~~ 75 (555)
T TIGR01194 4 AIGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFL-G----Q---GSLFSFGGLCLLALLFRIGADI 75 (555)
T ss_pred hHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-c----c---hHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666667 7788777777777776666555555555544321000 0 0 0112233445556677888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000851 747 FYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSW 826 (1253)
Q Consensus 747 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 826 (1253)
+...++.++..++|.++|++++++|++||++ +++|++++|+++|++.++.++.. +..++.+++.++++++++++++|
T Consensus 76 ~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 152 (555)
T TIGR01194 76 FPAYAGMHIIANLRIALCEKILGAPIEEIDR--RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSV 152 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHh--cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999975 78999999999999999998864 77788888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHH--HHHHHHHHHHhHHHHHHHH
Q 000851 827 RLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEK--RISIQFASELSQPNKQALL 904 (1253)
Q Consensus 827 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~--~~~~~~~~~~~~~~~~~~~ 904 (1253)
.+++++++.+|+.++...+..+..++...+.++..++..+.+.|.+.|++++|+|+.++ ...+++.+..++..+...+
T Consensus 153 ~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (555)
T TIGR01194 153 PMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHII 232 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999998888887777766666666677777888899999999999999999999954 5577788888877777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000851 905 RGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILY 984 (1253)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~ 984 (1253)
..........+...+..+...+.+|++... +.++.|.++++..+......++..+...+..+..+..+.+|+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~ 309 (555)
T TIGR01194 233 EILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGE 309 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 655555444555555555555555555543 78899999999999889999999999999999999999999999875
Q ss_pred ccccCCC--CCCC-C-c---ccccccCcEEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHh
Q 000851 985 RKTAIQP--DDPA-S-K---EVTEIKGNIELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVM 1055 (1253)
Q Consensus 985 ~~~~~~~--~~~~-~-~---~~~~~~g~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~ 1055 (1253)
...+.++ +.+. . . ++....+.|+|+||+|+|++.+ ..++|+|+||+|++||++|||||||||||||+++|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~ 389 (555)
T TIGR01194 310 RFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFC 389 (555)
T ss_pred hhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHh
Confidence 3211111 0010 0 0 1112246799999999998532 236999999999999999999999999999999999
Q ss_pred ccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCcc
Q 000851 1056 RFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQ 1135 (1253)
Q Consensus 1056 r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gld 1135 (1253)
|+|+|++|+|.+||.|+++++.+++|+++++|+|||++|++|+++|+ .++.++++++++++.++++++++++|+|||
T Consensus 390 g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~ 466 (555)
T TIGR01194 390 GLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFS 466 (555)
T ss_pred CCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccC
Confidence 99999999999999999999999999999999999999999999996 356789999999999999999999999999
Q ss_pred ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHH-H-cCCceEEEEccCchhhhccCEEE
Q 000851 1136 SHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDK-L-MEGRTTIMVAHRLSTIRNADKIA 1213 (1253)
Q Consensus 1136 t~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~-~-~~~~TvI~IaHrl~ti~~~D~I~ 1213 (1253)
|. .+|||||||||+||||++++|+|||||||||+||++||+.+++.+.+ . .+++|+|+||||++++..||+|+
T Consensus 467 t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~ 541 (555)
T TIGR01194 467 TT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQII 541 (555)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEE
Confidence 95 68999999999999999999999999999999999999999987753 3 46899999999999999999999
Q ss_pred EEeCCEEEEe
Q 000851 1214 VLQQGKVAEI 1223 (1253)
Q Consensus 1214 Vl~~G~ive~ 1223 (1253)
||++|+++|.
T Consensus 542 ~l~~G~i~~~ 551 (555)
T TIGR01194 542 KLAAGCIVKD 551 (555)
T ss_pred EEECCEEEEe
Confidence 9999999974
No 77
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-73 Score=695.31 Aligned_cols=456 Identities=25% Similarity=0.416 Sum_probs=348.7
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCH-HHHhccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL-KWLREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~i 454 (1253)
-|+++|++++|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. +.+|++|
T Consensus 4 ~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPGV--KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECCE--EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 48999999999743 49999999999999999999999999999999999999999999999999875543 4567889
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCC-----CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 455 GLVSQEPALFAT-SIANNILLGKED-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
+||+|++.+|.. |++||+.++... ....+..+ .+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lara 154 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY-----EAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAKA 154 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH-----HHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHHH
Confidence 999999988875 999999986421 11112111 122333333 33333445567899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcCchH
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGEY 606 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~y 606 (1253)
|+.+|++|||||||++||+.+.+.+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|++++.++..+...
T Consensus 155 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~----- 229 (501)
T PRK11288 155 LARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD----- 229 (501)
T ss_pred HHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC-----
Confidence 999999999999999999999999999999875 47899999999999865 89999999999986542100000
Q ss_pred HHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHHHHHHhhchhHHHHHH
Q 000851 607 AALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLG 686 (1253)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (1253)
. + .. .
T Consensus 230 -------------------------------------------~----~------------~~---~------------- 234 (501)
T PRK11288 230 -------------------------------------------R----D------------QL---V------------- 234 (501)
T ss_pred -------------------------------------------H----H------------HH---H-------------
Confidence 0 0 00 0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 687 SVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSA 766 (1253)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ 766 (1253)
. .
T Consensus 235 ----------------------~--------------------------------------------------------~ 236 (501)
T PRK11288 235 ----------------------Q--------------------------------------------------------A 236 (501)
T ss_pred ----------------------H--------------------------------------------------------H
Confidence 0 0
Q ss_pred HHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000851 767 ILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAE 846 (1253)
Q Consensus 767 ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~ 846 (1253)
+ .... .
T Consensus 237 ~-------~~~~---~---------------------------------------------------------------- 242 (501)
T PRK11288 237 M-------VGRE---I---------------------------------------------------------------- 242 (501)
T ss_pred h-------cCCC---c----------------------------------------------------------------
Confidence 0 0000 0
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 847 QLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYAL 926 (1253)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (1253)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccCcE
Q 000851 927 GLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNI 1006 (1253)
Q Consensus 927 ~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I 1006 (1253)
.+ .... .+. +. .+..+
T Consensus 243 --------------------------------------------------~~---~~~~----~~~-~~------~~~~l 258 (501)
T PRK11288 243 --------------------------------------------------GD---IYGY----RPR-PL------GEVRL 258 (501)
T ss_pred --------------------------------------------------cc---cccc----ccc-CC------CCcEE
Confidence 00 0000 000 00 01248
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCH-HHHhcceE
Q 000851 1007 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL-RSLRRKIG 1085 (1253)
Q Consensus 1007 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~-~~lR~~i~ 1085 (1253)
+++|++++ .+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. +..|++++
T Consensus 259 ~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 331 (501)
T PRK11288 259 RLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIM 331 (501)
T ss_pred EEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCE
Confidence 89999842 38999999999999999999999999999999999999999999999999875543 45678999
Q ss_pred EEccCCC---ccc-ccHHHHhccCCCCC--------CHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChhHHHH
Q 000851 1086 LVQQEPA---LFS-TTIYENIKYGNEDA--------SEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1086 ~V~Qdp~---Lf~-gTIreNl~~g~~~~--------~d~ei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSgGQkQr 1152 (1253)
|+||+|. +|+ .|+.||+.++.... ...+. ...+.+++..+ |++ ........+||||||||
T Consensus 332 ~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qr 404 (501)
T PRK11288 332 LCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWE-----AENADRFIRSL--NIKTPSREQLIMNLSGGNQQK 404 (501)
T ss_pred EcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHH-----HHHHHHHHHhc--CcccCCccCccccCCHHHHHH
Confidence 9999973 554 79999998643110 11110 11122334333 231 12333445799999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|.|||+|||+++.+.. ||++++|++|++++.|+++|..
T Consensus 405 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 405 AILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred HHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 999999999999999999999999999999999998875 48899999999999965 9999999999999999988765
No 78
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.3e-72 Score=611.04 Aligned_cols=470 Identities=29% Similarity=0.485 Sum_probs=368.6
Q ss_pred cEEEEEEEEECCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCCCCHH
Q 000851 376 QIEFSEVCFAYPSR--PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSLQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~ 448 (1253)
-++++|++.+|... ...++++|||+|++||++||||+||||||-..+.++|+.+- -+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 47889988888532 23399999999999999999999999999999999999864 479999999999888888
Q ss_pred HHhc----ccEEEeccCc--cCcc-cHHHH----HhcCCC---CCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCC
Q 000851 449 WLRE----QMGLVSQEPA--LFAT-SIANN----ILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 514 (1253)
Q Consensus 449 ~~r~----~i~~v~Q~~~--lf~~-ti~~n----i~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 514 (1253)
.+|. +|++++|||. |-+- ||..- |.+-+. .+..+++.+.++.+++.+- .-.+...+.+
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhCCcc
Confidence 7774 7999999995 2221 55444 443221 1123455555565554321 1234455679
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 000851 515 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVV 591 (1253)
Q Consensus 515 LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~ 591 (1253)
||||||||+.||.||+.+|++||-||||.|||...+.+|.+.|+++.+ |..+++|||+|..++. ||||+||.+|+++
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 999999999999999999999999999999999999999999999853 7899999999999987 7999999999999
Q ss_pred EeeCcchhhhcC-chHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHH
Q 000851 592 ESGTHVDLISKG-GEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIW 670 (1253)
Q Consensus 592 ~~g~~~~l~~~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (1253)
|+|+.+++.+.+ ..|.+..-
T Consensus 238 E~~~t~~lF~~PqHpYTr~Ll----------------------------------------------------------- 258 (534)
T COG4172 238 ETGTTETLFAAPQHPYTRKLL----------------------------------------------------------- 258 (534)
T ss_pred ecCcHHHHhhCCCChHHHHHH-----------------------------------------------------------
Confidence 999877776532 11211110
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 671 ELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTL 750 (1253)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 750 (1253)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000851 751 MGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAA 830 (1253)
Q Consensus 751 ~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l 830 (1253)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000851 831 VVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISG 910 (1253)
Q Consensus 831 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1253)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC
Q 000851 911 FGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQ 990 (1253)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~ 990 (1253)
+..|.-.
T Consensus 259 -------------------------------------------------------------------------~aeP~g~ 265 (534)
T COG4172 259 -------------------------------------------------------------------------AAEPSGD 265 (534)
T ss_pred -------------------------------------------------------------------------hcCCCCC
Confidence 0000000
Q ss_pred CCCCCCcccccccCcEEEEeEEEECCCCCC--------cccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCc
Q 000851 991 PDDPASKEVTEIKGNIELRNVSFKYPVRPD--------ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPIS 1062 (1253)
Q Consensus 991 ~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~--------~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~ 1062 (1253)
+. ..+.....-++.+||...||-++. ..+++++||+.++||++||||+|||||||+-.+|+|+.+++
T Consensus 266 ~~----p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~- 340 (534)
T COG4172 266 PP----PLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ- 340 (534)
T ss_pred CC----CCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-
Confidence 00 000001123677777777763221 24789999999999999999999999999999999999876
Q ss_pred cEEEECCccCCCCCHHH---HhcceEEEccCCC--ccc-ccHHHHhccC----CCCCC----HHHHHHHHHHhcHHHHHH
Q 000851 1063 GTVLIDGYDIRTLNLRS---LRRKIGLVQQEPA--LFS-TTIYENIKYG----NEDAS----EIELMKATKAANAHGFIS 1128 (1253)
Q Consensus 1063 G~I~idG~di~~i~~~~---lR~~i~~V~Qdp~--Lf~-gTIreNl~~g----~~~~~----d~ei~~al~~a~l~~~I~ 1128 (1253)
|+|.++|.+|...+.+. +|+++-+|+|||+ |-+ .||.+=|.-| .|..+ ++.+.+|++.+|++.-..
T Consensus 341 G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r 420 (534)
T COG4172 341 GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPATR 420 (534)
T ss_pred ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHh
Confidence 99999999999998764 7899999999997 322 4666655444 33333 456788888888865432
Q ss_pred hCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhh
Q 000851 1129 RMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTI 1206 (1253)
Q Consensus 1129 ~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti 1206 (1253)
. .-...+|||||||||||||++-+|++++||||||+||..-.++|.+.|+++.+ +-+-++|||+|..+
T Consensus 421 ~----------RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~Vv 490 (534)
T COG4172 421 N----------RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVV 490 (534)
T ss_pred h----------cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHH
Confidence 2 12357999999999999999999999999999999999999999999998753 67999999999999
Q ss_pred hc-cCEEEEEeCCEEEEecChhHHhhcccchHHHH
Q 000851 1207 RN-ADKIAVLQQGKVAEIGSHEQLLRKENGIYKQL 1240 (1253)
Q Consensus 1207 ~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L 1240 (1253)
+. ||+|+||.+|+|||+|+-+++++++...|.+-
T Consensus 491 rAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 491 RALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred HHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHHH
Confidence 77 99999999999999999999999888888654
No 79
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.4e-72 Score=688.80 Aligned_cols=471 Identities=21% Similarity=0.380 Sum_probs=358.4
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHh-ccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLR-EQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r-~~i 454 (1253)
-|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 4999999999974 3499999999999999999999999999999999999999999999999999877665554 469
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCCCC--HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000851 455 GLVSQEPALFAT-SIANNILLGKEDAS--MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 531 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~ 531 (1253)
|||+|++.++.. |++||+.++..... .+++.++++.. |++........+||||||||++|||||+.
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAAL-----------GCQLDLDSSAGSLEVADRQIVEILRGLMR 157 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHc-----------CCCccccCChhhCCHHHHHHHHHHHHHHc
Confidence 999999988875 99999998753221 12333334333 33333445566899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcCchHHHH
Q 000851 532 NPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGEYAAL 609 (1253)
Q Consensus 532 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~ 609 (1253)
+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.... .
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~-----~ 232 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD-----I 232 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH-----H
Confidence 999999999999999999999999999874 47899999999999865 8999999999999988766543210 0
Q ss_pred HHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHHHHHHhhchhHHHHHHHHH
Q 000851 610 VNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVG 689 (1253)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1253)
.......
T Consensus 233 ~~~~~~~------------------------------------------------------------------------- 239 (510)
T PRK15439 233 IQAITPA------------------------------------------------------------------------- 239 (510)
T ss_pred HHHHhCc-------------------------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 690 AILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILS 769 (1253)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~ 769 (1253)
T Consensus 240 -------------------------------------------------------------------------------- 239 (510)
T PRK15439 240 -------------------------------------------------------------------------------- 239 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 770 NEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLF 849 (1253)
Q Consensus 770 ~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~ 849 (1253)
.. .....+.
T Consensus 240 -~~---~~~~~~~------------------------------------------------------------------- 248 (510)
T PRK15439 240 -AR---EKSLSAS------------------------------------------------------------------- 248 (510)
T ss_pred -cc---ccccccc-------------------------------------------------------------------
Confidence 00 0000000
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 850 LKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLW 929 (1253)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1253)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccCcEEEE
Q 000851 930 YASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELR 1009 (1253)
Q Consensus 930 ~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~ 1009 (1253)
.+. .. ..+...+..+ ..+..|+++
T Consensus 249 -----------------------------------------------~~~-~~--~~~~~~~~~~------~~~~~l~~~ 272 (510)
T PRK15439 249 -----------------------------------------------QKL-WL--ELPGNRRQQA------AGAPVLTVE 272 (510)
T ss_pred -----------------------------------------------ccc-cc--cccccccccC------CCCceEEEe
Confidence 000 00 0000000000 011248999
Q ss_pred eEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-HhcceEEEc
Q 000851 1010 NVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRKIGLVQ 1088 (1253)
Q Consensus 1010 ~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~-lR~~i~~V~ 1088 (1253)
|++. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+... +|++|+|||
T Consensus 273 ~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~ 344 (510)
T PRK15439 273 DLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYLP 344 (510)
T ss_pred CCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEECC
Confidence 9983 1599999999999999999999999999999999999999999999999998776654 467899999
Q ss_pred cCC---Cccc-ccHHHHhccCC----CC-CCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChhHHHHHHHHHH
Q 000851 1089 QEP---ALFS-TTIYENIKYGN----ED-ASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1089 Qdp---~Lf~-gTIreNl~~g~----~~-~~d~ei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|++ .+|. .|+.+|+.... +. ....+. +..+.++++.+ |++ .........||||||||++||||
T Consensus 345 q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~LSgG~kqrl~la~a 417 (510)
T PRK15439 345 EDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARE-----NAVLERYRRAL--NIKFNHAEQAARTLSGGNQQKVLIAKC 417 (510)
T ss_pred CChhhCCccCCCcHHHHHHhhhhhhhccccChHHH-----HHHHHHHHHHc--CCCCCCccCccccCCcHHHHHHHHHHH
Confidence 996 3665 49999985320 10 011111 11223444443 333 23444556799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhcccch
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKENGI 1236 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~g~ 1236 (1253)
|+.+|+||||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||++++|++|+++..|+++++..+ ..
T Consensus 418 l~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~~--~~ 495 (510)
T PRK15439 418 LEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAINVD--TI 495 (510)
T ss_pred HhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCCHH--HH
Confidence 999999999999999999999999999999875 48899999999999976 999999999999999999887642 33
Q ss_pred HHHHH
Q 000851 1237 YKQLI 1241 (1253)
Q Consensus 1237 y~~L~ 1241 (1253)
....+
T Consensus 496 ~~~~~ 500 (510)
T PRK15439 496 MRLAF 500 (510)
T ss_pred HHHhh
Confidence 44444
No 80
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=4.3e-71 Score=619.89 Aligned_cols=498 Identities=24% Similarity=0.336 Sum_probs=456.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHH
Q 000851 724 DQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADR 803 (1253)
Q Consensus 724 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~ 803 (1253)
.....+.+++.++.+++.+++..+..+.+.++...++..+|...+++|..- +.+|+=. .--+|.++++++++..
T Consensus 63 v~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~-----~~~g~~~-Q~LrDL~qvR~Fltg~ 136 (580)
T COG4618 63 VMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLR-----RGSGDGL-QPLRDLDQVRQFLTGT 136 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhh-----cCCCccc-cchhhHHHHHHHHcCC
Confidence 344455556667777888999999999999999999999999998777652 2333211 2346999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCc
Q 000851 804 LSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGI 883 (1253)
Q Consensus 804 l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~ 883 (1253)
-+..+.+..+.-+++.++|.+++++.++.+++..+++.+.++..+..++..++..+...+.+.+...+.+|.++|++.|+
T Consensus 137 g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM 216 (580)
T COG4618 137 GLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGM 216 (580)
T ss_pred CcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999998888888888999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Q 000851 884 EKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETL 963 (1253)
Q Consensus 884 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 963 (1253)
.....++|.+....+.....+.+-..+....++..+-.+....++-+|.+++..+++|.|.+++.-..+.-...|+...+
T Consensus 217 ~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI 296 (580)
T COG4618 217 LGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAI 296 (580)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHH
Confidence 99999999999999999888888888899999999999999999999999999999999999999888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCC
Q 000851 964 ALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQS 1043 (1253)
Q Consensus 964 ~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~S 1043 (1253)
..|.++..+..+..|+.+++...+...+ ..+.+..+|.+.++++++.-|.. .+|+|+|+||+++|||-+||+|||
T Consensus 297 ~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m~LP~P~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPS 371 (580)
T COG4618 297 ANWKQFVAARQSYKRLNELLAELPAAAE----RMPLPAPQGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPS 371 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccccC----CCCCCCCCceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCC
Confidence 9999999999999999999876654332 23345567899999999976643 578999999999999999999999
Q ss_pred CCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcH
Q 000851 1044 GSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANA 1123 (1253)
Q Consensus 1044 GSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l 1123 (1253)
|||||||.++|.|.+.|.+|.|++||-|+++++.+++-++|||.|||..||+|||+|||+-..++.+++.|.+|++.|+.
T Consensus 372 gSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgv 451 (580)
T COG4618 372 GSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGV 451 (580)
T ss_pred CccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcCh
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred HHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccC
Q 000851 1124 HGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHR 1202 (1253)
Q Consensus 1124 ~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHr 1202 (1253)
||.|.++|+||||.||++|..|||||||||+|||||+.+|.+++||||-|+||.+.|+.+.++|.+.+ +|+|+|+||||
T Consensus 452 HelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHR 531 (580)
T COG4618 452 HELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHR 531 (580)
T ss_pred HHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999875 69999999999
Q ss_pred chhhhccCEEEEEeCCEEEEecChhHHhhc
Q 000851 1203 LSTIRNADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1203 l~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
++.+..+|+|+||++|++..+|+-+|.+++
T Consensus 532 Ps~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 532 PSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred HHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999999999999874
No 81
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=6.5e-71 Score=618.46 Aligned_cols=532 Identities=23% Similarity=0.300 Sum_probs=458.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 56 SLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVAFWMQTGERQTARLRLKYL 135 (1253)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~ 135 (1253)
.+++.+..++....|+++=++-|.+.... +. ..+.....+.+++.++..++.+++.....+++.++...+...+|
T Consensus 29 ~lfS~~INiL~L~~~lyMLQVyDRVL~S~----s~-~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~ 103 (580)
T COG4618 29 GLFSAVINLLALTGPLYMLQVYDRVLPSR----SV-PTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVF 103 (580)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhhccCC----Cc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34445555666666667778888876421 11 22222333444555566778889999999999999999999999
Q ss_pred HHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 136 QSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGA 215 (1253)
Q Consensus 136 ~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~ 215 (1253)
....+.+..--. .|+=. ..-+|.+++++|++..-+..+-+.--+...+.++|.+++++.+++++...+++.+.++
T Consensus 104 ~a~~~~~l~~~~----~g~~~-Q~LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~l 178 (580)
T COG4618 104 AASFSAPLLRRG----SGDGL-QPLRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALL 178 (580)
T ss_pred HHHHhhHHhhcC----CCccc-cchhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999877765432 22222 2337999999999874444444443344556778889999999988888888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 216 YTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWA 295 (1253)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1253)
--+..++..++..+...+.+..++-+.+|.++|++.|......++|.+.+.++.+...+..-..+.+..++..+-.+...
T Consensus 179 n~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs 258 (580)
T COG4618 179 NERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQS 258 (580)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 77778888888888899999999999999999999999999999999999999999888888888888888888888899
Q ss_pred HHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCC
Q 000851 296 LLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAG 375 (1253)
Q Consensus 296 ~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~ 375 (1253)
.++..|+|++++|++|.|.+++.-+.+.....|+-.....+..+..++.|.+|+.++|+..|... .....|..+|
T Consensus 259 ~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~-----~~m~LP~P~g 333 (580)
T COG4618 259 AVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAA-----ERMPLPAPQG 333 (580)
T ss_pred HHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc-----CCCCCCCCCc
Confidence 99999999999999999998886555556667899999999999999999999999998766533 2345667789
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.+.++++++.-|+.++++|+|+||++++||.+|||||||||||||.++|.|.++|.+|.|++||.|++.++.+.+-++||
T Consensus 334 ~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiG 413 (580)
T COG4618 334 ALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIG 413 (580)
T ss_pred eeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccC
Confidence 99999999998887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000851 456 LVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKI 535 (1253)
Q Consensus 456 ~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~i 535 (1253)
|.|||..||+|||+|||+--.++.+.+.|.+|++.+++||.|.++|+||||.+|+.|..|||||||||+||||+|.||.+
T Consensus 414 YLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~l 493 (580)
T COG4618 414 YLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFL 493 (580)
T ss_pred cCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcE
Confidence 99999999999999999877778889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 536 LLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 536 lilDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
++||||-|+||.+-|+.+.++|.+.+ +|.|+|+||||.+.+..+|+|.||++|++...|+.+|.+++
T Consensus 494 vVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 494 VVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred EEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999999999885 58999999999999999999999999999999999998764
No 82
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.3e-72 Score=688.42 Aligned_cols=459 Identities=23% Similarity=0.389 Sum_probs=348.3
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC--CCcEEEECCeeCCCCCHHH-Hhcc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP--TSGKILLDGHDLKSLQLKW-LREQ 453 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~~~~~~~~~-~r~~ 453 (1253)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++.
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999974 3499999999999999999999999999999999999987 7999999999998766544 4667
Q ss_pred cEEEeccCccCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhCcHHHHhcCCCCccccc-cCCCCCCChHHHHHHHH
Q 000851 454 MGLVSQEPALFAT-SIANNILLGKED------ASMDRVIEAAKAANAHSFVEGLPDGYQTQV-GEGGTQLSGGQKQRIAI 525 (1253)
Q Consensus 454 i~~v~Q~~~lf~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-g~~g~~LSgGq~qriai 525 (1253)
|+||+|++.++.. |++||+.++... ...++..+ .+.+.++.+ |++... .....+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~i 152 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL-----RAKNLLREL--QLDADNVTRPVGDYGGGQQQLVEI 152 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccCchhhCCHHHHHHHHH
Confidence 9999999988865 999999886421 11122111 122333333 332221 23356899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 526 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 526 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.++....
T Consensus 153 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~- 231 (500)
T TIGR02633 153 AKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED- 231 (500)
T ss_pred HHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH-
Confidence 999999999999999999999999999999999874 47899999999999876 899999999999876532211000
Q ss_pred chHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHHHHHHhhchhHHH
Q 000851 604 GEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYA 683 (1253)
Q Consensus 604 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1253)
..
T Consensus 232 ----------------------------------------------------------------~~-------------- 233 (500)
T TIGR02633 232 ----------------------------------------------------------------DI-------------- 233 (500)
T ss_pred ----------------------------------------------------------------HH--------------
Confidence 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 684 VLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSM 763 (1253)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~ 763 (1253)
+ ..
T Consensus 234 --------~----------------~~----------------------------------------------------- 236 (500)
T TIGR02633 234 --------I----------------TM----------------------------------------------------- 236 (500)
T ss_pred --------H----------------HH-----------------------------------------------------
Confidence 0 00
Q ss_pred HHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000851 764 FSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAF 843 (1253)
Q Consensus 764 ~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~ 843 (1253)
. +..+ .
T Consensus 237 ---~-------~~~~---~------------------------------------------------------------- 242 (500)
T TIGR02633 237 ---M-------VGRE---I------------------------------------------------------------- 242 (500)
T ss_pred ---H-------hCcc---c-------------------------------------------------------------
Confidence 0 0000 0
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 844 VAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCS 923 (1253)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1253)
T Consensus 243 -------------------------------------------------------------------------------- 242 (500)
T TIGR02633 243 -------------------------------------------------------------------------------- 242 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCccccccc
Q 000851 924 YALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIK 1003 (1253)
Q Consensus 924 ~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1253)
. ...+. .+ .+. .+
T Consensus 243 -------------------------------------------~----------------~~~~~-~~-~~~------~~ 255 (500)
T TIGR02633 243 -------------------------------------------T----------------SLYPH-EP-HEI------GD 255 (500)
T ss_pred -------------------------------------------c----------------ccccc-cc-cCC------CC
Confidence 0 00000 00 000 01
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-CccEEEECCccCCCCCH-HHHh
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-ISGTVLIDGYDIRTLNL-RSLR 1081 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-~~G~I~idG~di~~i~~-~~lR 1081 (1253)
.-|+++|++++|+...+.++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+. ..+|
T Consensus 256 ~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~ 335 (500)
T TIGR02633 256 VILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIR 335 (500)
T ss_pred ceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHh
Confidence 148999999999522234699999999999999999999999999999999999995 89999999999865443 5678
Q ss_pred cceEEEccCC---Cccc-ccHHHHhccCCCC-------CCHHHHHHHHHHhcHHHHHHhCCCCccc-cccCCCCCCChhH
Q 000851 1082 RKIGLVQQEP---ALFS-TTIYENIKYGNED-------ASEIELMKATKAANAHGFISRMPEGYQS-HVGDRGVQLSGGQ 1149 (1253)
Q Consensus 1082 ~~i~~V~Qdp---~Lf~-gTIreNl~~g~~~-------~~d~ei~~al~~a~l~~~I~~lp~gldt-~vge~G~~LSgGQ 1149 (1253)
++++||||++ .+|+ .|+++|+.++... ....+ ....+.++++.+ |+.. ........|||||
T Consensus 336 ~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~~LSgGq 408 (500)
T TIGR02633 336 AGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAA-----ELQIIGSAIQRL--KVKTASPFLPIGRLSGGN 408 (500)
T ss_pred CCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHH-----HHHHHHHHHHhc--CccCCCccCccccCCHHH
Confidence 8999999996 3665 5999999874210 11111 111222333333 2221 1233445799999
Q ss_pred HHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChh
Q 000851 1150 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHE 1227 (1253)
Q Consensus 1150 kQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~ 1227 (1253)
|||++|||||+.+|++|||||||++||+.+.+.+++.|++.. +|.|||+|||+++.+.. ||++++|++|+++..++..
T Consensus 409 kqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~ 488 (500)
T TIGR02633 409 QQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNH 488 (500)
T ss_pred HHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccc
Confidence 999999999999999999999999999999999999998864 57899999999999976 9999999999999877654
Q ss_pred H
Q 000851 1228 Q 1228 (1253)
Q Consensus 1228 e 1228 (1253)
+
T Consensus 489 ~ 489 (500)
T TIGR02633 489 A 489 (500)
T ss_pred c
Confidence 4
No 83
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.5e-68 Score=706.33 Aligned_cols=216 Identities=27% Similarity=0.423 Sum_probs=186.5
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
..|+++|+++.|+++++.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|+.+
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcE
Confidence 3699999999996333459999999999999999999999999999999999999999999999999864 456678899
Q ss_pred EEEeccCccCcc-cHHHHHhcCCC--CCCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 455 GLVSQEPALFAT-SIANNILLGKE--DASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
|||+|++.+|+. |++|||.++.. ..+. +++.+.++.. |++........+||||||||++|||
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~v-----------gL~~~~~~~~~~LSGGqKQRLsLAr 1074 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDT-----------GLHHKRNEEAQDLSGGMQRKLSVAI 1074 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHHHHHH
Confidence 999999999975 99999987421 1111 2233333333 4444455666789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||+.+|++||||||||+||+.+++.+++.|+++++|+|+|++||+++.+.. ||||++|++|++++.|+.++|.++
T Consensus 1075 ALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~ 1150 (2272)
T TIGR01257 1075 AFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNC 1150 (2272)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHh
Confidence 999999999999999999999999999999999889999999999999975 899999999999999999998765
No 84
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-72 Score=682.53 Aligned_cols=453 Identities=22% Similarity=0.374 Sum_probs=346.9
Q ss_pred EEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCH-HHHhcccEEE
Q 000851 379 FSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL-KWLREQMGLV 457 (1253)
Q Consensus 379 ~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~i~~v 457 (1253)
++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. +.+++.++||
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 4689999974 349999999999999999999999999999999999999999999999999876543 4467789999
Q ss_pred eccCccCcc-cHHHHHhcCCCC-----CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000851 458 SQEPALFAT-SIANNILLGKED-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 531 (1253)
Q Consensus 458 ~Q~~~lf~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~ 531 (1253)
+|++.++.. |++||+.++... .+.++..+ .+.+.++.+ |++........+||||||||++|||||+.
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHHh
Confidence 999987754 999999986421 11222111 122334444 45545566678899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcCchHHHH
Q 000851 532 NPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGEYAAL 609 (1253)
Q Consensus 532 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~ 609 (1253)
+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++... ..
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-----~~ 226 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD-----KI 226 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH-----HH
Confidence 999999999999999999999999998875 47899999999999865 899999999999987764332100 00
Q ss_pred HHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHHHHHHhhchhHHHHHHHHH
Q 000851 610 VNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVG 689 (1253)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1253)
.
T Consensus 227 ~------------------------------------------------------------------------------- 227 (491)
T PRK10982 227 I------------------------------------------------------------------------------- 227 (491)
T ss_pred H-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 690 AILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILS 769 (1253)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~ 769 (1253)
. .+
T Consensus 228 -------------------~--------------------------------------------------------~~-- 230 (491)
T PRK10982 228 -------------------A--------------------------------------------------------MM-- 230 (491)
T ss_pred -------------------H--------------------------------------------------------HH--
Confidence 0 00
Q ss_pred CCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 770 NEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLF 849 (1253)
Q Consensus 770 ~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~ 849 (1253)
+...
T Consensus 231 -----~~~~----------------------------------------------------------------------- 234 (491)
T PRK10982 231 -----VGRS----------------------------------------------------------------------- 234 (491)
T ss_pred -----hCCC-----------------------------------------------------------------------
Confidence 0000
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 850 LKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLW 929 (1253)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1253)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccCcEEEE
Q 000851 930 YASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELR 1009 (1253)
Q Consensus 930 ~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~ 1009 (1253)
. . ...+. +..+. .+..|+++
T Consensus 235 ----------~------------------------------------~------~~~~~--~~~~~------~~~~i~~~ 254 (491)
T PRK10982 235 ----------L------------------------------------T------QRFPD--KENKP------GEVILEVR 254 (491)
T ss_pred ----------c------------------------------------c------ccccc--ccCCC------CCcEEEEe
Confidence 0 0 00000 00000 01248999
Q ss_pred eEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH-HHhcceEEEc
Q 000851 1010 NVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR-SLRRKIGLVQ 1088 (1253)
Q Consensus 1010 ~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~-~lR~~i~~V~ 1088 (1253)
|++++|. ++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.++|+|
T Consensus 255 ~l~~~~~-----~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~ 329 (491)
T PRK10982 255 NLTSLRQ-----PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVT 329 (491)
T ss_pred CcccccC-----cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcC
Confidence 9999752 489999999999999999999999999999999999999999999999999876654 4578899999
Q ss_pred cCCC---ccc-ccHHHH-----hccCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChhHHHHHHH
Q 000851 1089 QEPA---LFS-TTIYEN-----IKYGNED---ASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1089 Qdp~---Lf~-gTIreN-----l~~g~~~---~~d~ei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSgGQkQrlaL 1155 (1253)
|++. +|+ .|+.+| +...... .+..+.. ..+.++++.+ |+. -.......+||||||||++|
T Consensus 330 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrv~l 402 (491)
T PRK10982 330 EERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK-----SDTQWVIDSM--RVKTPGHRTQIGSLSGGNQQKVII 402 (491)
T ss_pred CchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH-----HHHHHHHHhc--CccCCCcccccccCCcHHHHHHHH
Confidence 9963 555 477666 3321110 1111111 1122344443 221 12344556799999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
|||++.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++.+.. ||++++|++|+++..++.+++
T Consensus 403 a~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 478 (491)
T PRK10982 403 GRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTKTT 478 (491)
T ss_pred HHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEccccC
Confidence 999999999999999999999999999999998864 58999999999999965 999999999999988876543
No 85
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.9e-71 Score=677.21 Aligned_cols=452 Identities=22% Similarity=0.289 Sum_probs=343.7
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++|+|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 4 l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~ 81 (490)
T PRK10938 4 LQISQGTFRLSDT--KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSD 81 (490)
T ss_pred EEEEeEEEEcCCe--eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhce
Confidence 8899999999753 39999999999999999999999999999999999999999999999988876676677788999
Q ss_pred EeccCcc--C-------cccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 457 VSQEPAL--F-------ATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 457 v~Q~~~l--f-------~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
++|++.+ + ..|+++|+.++. ...+++.++++..++.+. ......+||||||||++|||
T Consensus 82 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~ 148 (490)
T PRK10938 82 EWQRNNTDMLSPGEDDTGRTTAEIIQDEV--KDPARCEQLAQQFGITAL-----------LDRRFKYLSTGETRKTLLCQ 148 (490)
T ss_pred eccCcchhhcccchhhccccHHHhcccch--hHHHHHHHHHHHcCCHhh-----------hhCCcccCCHHHHHHHHHHH
Confidence 9998753 2 358999986542 113345555555544433 33445689999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcCch
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGE 605 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~ 605 (1253)
||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+.+++.... .
T Consensus 149 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~ 227 (490)
T PRK10938 149 ALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA-L 227 (490)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch-h
Confidence 9999999999999999999999999999999875 47899999999999876 8999999999999888755542210 0
Q ss_pred HHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHHHHHHhhchhHHHHH
Q 000851 606 YAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVL 685 (1253)
Q Consensus 606 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (1253)
..++..
T Consensus 228 ~~~~~~-------------------------------------------------------------------------- 233 (490)
T PRK10938 228 VAQLAH-------------------------------------------------------------------------- 233 (490)
T ss_pred hhhhhh--------------------------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 686 GSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFS 765 (1253)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~ 765 (1253)
. +
T Consensus 234 -------------------------------~-----------------------------------------------~ 235 (490)
T PRK10938 234 -------------------------------S-----------------------------------------------E 235 (490)
T ss_pred -------------------------------h-----------------------------------------------h
Confidence 0 0
Q ss_pred HHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000851 766 AILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVA 845 (1253)
Q Consensus 766 ~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~ 845 (1253)
+ + ...+ .+.
T Consensus 236 ~-----~--~~~~-~~~--------------------------------------------------------------- 244 (490)
T PRK10938 236 Q-----L--EGVQ-LPE--------------------------------------------------------------- 244 (490)
T ss_pred c-----c--Cccc-cCc---------------------------------------------------------------
Confidence 0 0 0000 000
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 846 EQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYA 925 (1253)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1253)
T Consensus 245 -------------------------------------------------------------------------------- 244 (490)
T PRK10938 245 -------------------------------------------------------------------------------- 244 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccCc
Q 000851 926 LGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGN 1005 (1253)
Q Consensus 926 ~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~ 1005 (1253)
... +. .+... ...+..
T Consensus 245 ---------------------------------------------------------~~~-~~-~~~~~-----~~~~~~ 260 (490)
T PRK10938 245 ---------------------------------------------------------PDE-PS-ARHAL-----PANEPR 260 (490)
T ss_pred ---------------------------------------------------------ccc-cc-ccccc-----CCCCce
Confidence 000 00 00000 001124
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-CccEEEECCccCCC-CCHHHHhcc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-ISGTVLIDGYDIRT-LNLRSLRRK 1083 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-~~G~I~idG~di~~-i~~~~lR~~ 1083 (1253)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+.+| ++|+|.++|.++.. .+...+|++
T Consensus 261 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 337 (490)
T PRK10938 261 IVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKH 337 (490)
T ss_pred EEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhh
Confidence 999999999963 3599999999999999999999999999999999998876 69999999987632 233457889
Q ss_pred eEEEccCCCccc---ccHHHHhccCCC-------CCC---HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1084 IGLVQQEPALFS---TTIYENIKYGNE-------DAS---EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~---gTIreNl~~g~~-------~~~---d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
|+|++|++.++. .|+++++.++.. ... ++++.++++..++.+. .......+||||||
T Consensus 338 i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgGq~ 407 (490)
T PRK10938 338 IGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKR----------TADAPFHSLSWGQQ 407 (490)
T ss_pred ceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchh----------hccCchhhCCHHHH
Confidence 999999987643 467777653210 011 1233444444443220 23334467999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC-C-ceEEEEccCchhhhc--cCEEEEEeCCEEEEec
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME-G-RTTIMVAHRLSTIRN--ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~-~-~TvI~IaHrl~ti~~--~D~I~Vl~~G~ive~G 1224 (1253)
||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ + .|||+|||+++.+.. ||++++|++|++++.-
T Consensus 408 qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 408 RLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred HHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 999999999999999999999999999999999999998753 4 469999999999964 8999999999998753
No 86
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=8.2e-68 Score=655.45 Aligned_cols=525 Identities=18% Similarity=0.182 Sum_probs=406.2
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 41 FAAADKIDCVLMFLGSLGAFIHGATLPV-FFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGVAFW 119 (1253)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (1253)
++|.+++++ .++++++++++.+++... .|++.+.++|.... . ...+. .++++.++..++.+++.++.
T Consensus 5 ~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~---~----~~~~~----~~~~~~~~~~~~~~~~~~~~ 72 (547)
T PRK10522 5 RLVWRQYRW-PFISVMALSLASAALGIGLIAFINQRLIETADT---S----LLVLP----EFLGLLLLLMAVTLGSQLAL 72 (547)
T ss_pred HHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---c----chHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 345555544 344555666666555554 35677888886421 0 01111 11112222344667788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 120 MQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVWQLT 199 (1253)
Q Consensus 120 ~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 199 (1253)
.+.+.++..++|.++|+|++++|+++|++ .++|++++|+++|++.+...+. .++.++..++.++++++++++++|.++
T Consensus 73 ~~~~~~~~~~lR~~l~~~ll~~~~~~~~~-~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~ 150 (547)
T PRK10522 73 TTLGHHFVYRLRSEFIKRILDTHVERIEQ-LGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKML 150 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhc-cCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 88999999999999999999999999998 5999999999999999998766 467888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHH
Q 000851 200 LLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGE---AKAIESYSHSLKEALKQGKKSG 276 (1253)
Q Consensus 200 l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e---~~~~~~~~~~~~~~~~~~~~~~ 276 (1253)
+++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++++ ++.+ +.+.++|++..++..+...+..
T Consensus 151 li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (547)
T PRK10522 151 LVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRAD 229 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHH
Confidence 99999999998888889999999889999999999999999999999996 4443 4567888888877777666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000851 277 VAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKEN 356 (1253)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~ 356 (1253)
........+..++..+...+.+++++.. ..+ +.+.+..+.++......|+..+...+..++++..+.+|+.++++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~ 306 (547)
T PRK10522 230 TFHLSAVNWSNIMMLGAIGLVFYMANSL-GWA--DTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAP 306 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5544443333333322233333444332 112 3333333333333445688999999999999999999999997654
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEE
Q 000851 357 SHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKIL 436 (1253)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 436 (1253)
++.+ . +.....+ ..+.|+++||+|+|+++ +++|+|+||+|++||++||+||||||||||+++|+|+|+|++|+|+
T Consensus 307 ~~~~-~--~~~~~~~-~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~ 381 (547)
T PRK10522 307 YKAE-F--PRPQAFP-DWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEIL 381 (547)
T ss_pred cccc-c--ccccccC-cCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEE
Confidence 3211 1 1111111 13579999999999843 3599999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCC
Q 000851 437 LDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLS 516 (1253)
Q Consensus 437 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 516 (1253)
+||+|+++++.+++|++|+||+|||++|++|+++| + ++.+++++.++++..++.+++. .|+|. .+|.+||
T Consensus 382 ~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~-----~~G~~LS 451 (547)
T PRK10522 382 LDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLE-LEDGR-----ISNLKLS 451 (547)
T ss_pred ECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhh-ccccC-----CCCCCCC
Confidence 99999999999999999999999999999999999 2 4566777777777776665553 23332 1478999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEe-
Q 000851 517 GGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVES- 593 (1253)
Q Consensus 517 gGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~- 593 (1253)
||||||++||||++++|++||||||||+||+++++.+.+.+.+.. +++|+|+||||+++++.||+|++|++|+++|.
T Consensus 452 gGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~ 531 (547)
T PRK10522 452 KGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELT 531 (547)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEec
Confidence 999999999999999999999999999999999999999987653 48999999999999999999999999999986
Q ss_pred eCcch
Q 000851 594 GTHVD 598 (1253)
Q Consensus 594 g~~~~ 598 (1253)
|++.+
T Consensus 532 ~~~~~ 536 (547)
T PRK10522 532 GEERD 536 (547)
T ss_pred CCchh
Confidence 44443
No 87
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.2e-69 Score=681.29 Aligned_cols=509 Identities=24% Similarity=0.320 Sum_probs=427.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 97 HALYLVYLGLVALVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGH 176 (1253)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~ 176 (1253)
+...+.+++++..++..++.+.+...+.+..+.|-.++++++++-|++|||. +++|.+++|+++|++.+.+.+...+..
T Consensus 860 ~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt-TP~GRILNRFSkD~~~vD~~Lp~~~~~ 938 (1381)
T KOG0054|consen 860 YLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT-TPTGRILNRFSKDIDTVDVLLPFTLEF 938 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC-CCccchhhhcccchHHHHHhhHHHHHH
Confidence 3445566666777777788888999999999999999999999999999998 699999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHH
Q 000851 177 ALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAK 256 (1253)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~ 256 (1253)
++..++.+++.++++.+..|+..++++.+..++..+..++.+..+...+-.....+-.-+++.|+++|+-|||+|+.|++
T Consensus 939 ~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~r 1018 (1381)
T KOG0054|consen 939 FLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEER 1018 (1381)
T ss_pred HHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHH
Confidence 99999999999999999888887776666666666666666666666666666667778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCC-CChHHHHHHHHHHHHHHHHHHHHHH
Q 000851 257 AIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVR-HGD-TNGGKAFTTIINVIFSGFALGQAAP 334 (1253)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~-~g~-lt~g~~~~~~~~~~~~~~~l~~l~~ 334 (1253)
+.+++.+..+...+...-.....-++.--..++..+.... .+...+. .+. .++|.+=..+.|.+.....+..+..
T Consensus 1019 f~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~---~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR 1095 (1381)
T KOG0054|consen 1019 FIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLI---AALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVR 1095 (1381)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999998887766655443322222222233333332222 2222222 222 6677765566777777778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCC--CCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcC
Q 000851 335 NLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLP--KLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGP 412 (1253)
Q Consensus 335 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~--~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~ 412 (1253)
....+.....|.|||.++.+.++|.+ ...+...+++ +.+|+|+|+|++.+|..+-+.||+||||+|+|||++||||.
T Consensus 1096 ~~~elEn~m~SVERv~eY~~~~~E~p-~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGR 1174 (1381)
T KOG0054|consen 1096 QSSELENNMVSVERVLEYTDIPSEAP-LEIEESRPPPSWPSKGEIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGR 1174 (1381)
T ss_pred HHHHHHhcchhhhHHHHHhcCCCCCC-CCCcCCCCCCCCCCCCeEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCC
Confidence 89999999999999999998766621 1111111111 35699999999999975545699999999999999999999
Q ss_pred CCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhC
Q 000851 413 SGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAAN 492 (1253)
Q Consensus 413 sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~ 492 (1253)
+|||||||++.|.|+.+|.+|+|.|||.|+.++..++||++++++||||.||+||+|.|+-- ..+.+|+++++|++.++
T Consensus 1175 TGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDP-f~e~sD~~IW~ALe~~~ 1253 (1381)
T KOG0054|consen 1175 TGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDP-FDEYSDDEIWEALERCQ 1253 (1381)
T ss_pred CCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCc-ccccCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999852 23468999999999999
Q ss_pred cHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccC
Q 000851 493 AHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHR 572 (1253)
Q Consensus 493 ~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~ 572 (1253)
+.+++.++|+|+|+.|.|+|.|+|-||||.+||||||+++++||+|||||+++|++|...||+.|++.-+++|||.||||
T Consensus 1254 Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHR 1333 (1381)
T KOG0054|consen 1254 LKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHR 1333 (1381)
T ss_pred hHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcCEEEEEeCCEEEEeeCcchhhhc-CchHHHHHH
Q 000851 573 LSTVRDVDTIMVLKNGQVVESGTHVDLISK-GGEYAALVN 611 (1253)
Q Consensus 573 l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~y~~~~~ 611 (1253)
++|+.++|||+|||+|+|+|.|+|.+|+++ ++.|+++..
T Consensus 1334 l~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1334 LNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLK 1373 (1381)
T ss_pred cchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHH
Confidence 999999999999999999999999999987 566655543
No 88
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-69 Score=667.23 Aligned_cols=479 Identities=23% Similarity=0.385 Sum_probs=341.1
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++|+|+++ ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ..|||
T Consensus 2 l~i~~ls~~~~~~--~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~~ 68 (530)
T PRK15064 2 LSTANITMQFGAK--PLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLGK 68 (530)
T ss_pred EEEEEEEEEeCCc--EeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEEE
Confidence 7899999999743 4999999999999999999999999999999999999999999999873 36999
Q ss_pred EeccCccCcc-cHHHHHhcCCCCC----------------CHH---HHHHH----------HHHhCcHHHHhcCCCCccc
Q 000851 457 VSQEPALFAT-SIANNILLGKEDA----------------SMD---RVIEA----------AKAANAHSFVEGLPDGYQT 506 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~~~----------------~~~---~~~~~----------~~~~~~~~~i~~l~~g~~t 506 (1253)
++|++.+|.. |++||+.++.... ..+ .+.+. .....+.+.++.+ |++.
T Consensus 69 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~ 146 (530)
T PRK15064 69 LRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIPE 146 (530)
T ss_pred EeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCCh
Confidence 9999988865 9999998753100 000 00000 0011223344444 4432
Q ss_pred cc-cCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEE
Q 000851 507 QV-GEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMV 584 (1253)
Q Consensus 507 ~~-g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~v 584 (1253)
.. .....+||||||||++|||||+.+|++|||||||++||+++...+.+.|.+ .++|+|+|||+++.+.. ||+|++
T Consensus 147 ~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~~ 224 (530)
T PRK15064 147 EQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMAD 224 (530)
T ss_pred hHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEEE
Confidence 22 244678999999999999999999999999999999999999999999975 47899999999999866 899999
Q ss_pred EeCCEEE-EeeCcchhhhcCch-HHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCC
Q 000851 585 LKNGQVV-ESGTHVDLISKGGE-YAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQS 662 (1253)
Q Consensus 585 l~~G~i~-~~g~~~~l~~~~~~-y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (1253)
|++|+++ ..|++++.++.... +..... +. +
T Consensus 225 l~~g~i~~~~g~~~~~~~~~~~~~~~~~~-------------------------------------~~----~------- 256 (530)
T PRK15064 225 LDYGELRVYPGNYDEYMTAATQARERLLA-------------------------------------DN----A------- 256 (530)
T ss_pred EeCCEEEEecCCHHHHHHHHHHHHHHHHH-------------------------------------HH----H-------
Confidence 9999994 77877665431000 000000 00 0
Q ss_pred CCCcchHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHH
Q 000851 663 FAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYL 742 (1253)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 742 (1253)
....
T Consensus 257 -------------------------------------------------------~~~~--------------------- 260 (530)
T PRK15064 257 -------------------------------------------------------KKKA--------------------- 260 (530)
T ss_pred -------------------------------------------------------HHHH---------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 743 LQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAF 822 (1253)
Q Consensus 743 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~ 822 (1253)
....+...
T Consensus 261 -------------------------------------------------~~~~~~~~----------------------- 268 (530)
T PRK15064 261 -------------------------------------------------QIAELQSF----------------------- 268 (530)
T ss_pred -------------------------------------------------HHHHHHHH-----------------------
Confidence 00000000
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHH
Q 000851 823 ILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQA 902 (1253)
Q Consensus 823 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~ 902 (1253)
.. +.. +. . .+ .....
T Consensus 269 ---------------------------~~-------~~~--------------------~~-~---~~-------~~~~~ 283 (530)
T PRK15064 269 ---------------------------VS-------RFS--------------------AN-A---SK-------AKQAT 283 (530)
T ss_pred ---------------------------HH-------Hhh--------------------cc-c---hh-------hHHHH
Confidence 00 000 00 0 00 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 903 LLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGI 982 (1253)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~ 982 (1253)
....++...
T Consensus 284 -----------------------------------------------------------------------~~~~~~~~~ 292 (530)
T PRK15064 284 -----------------------------------------------------------------------SRAKQIDKI 292 (530)
T ss_pred -----------------------------------------------------------------------HHHHHHhhc
Confidence 000000000
Q ss_pred -hcccccCCCCCCC---CcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccC
Q 000851 983 -LYRKTAIQPDDPA---SKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFY 1058 (1253)
Q Consensus 983 -~~~~~~~~~~~~~---~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~ 1058 (1253)
....+......+. .......+..|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|+|++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~ 369 (530)
T PRK15064 293 KLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDN---GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGEL 369 (530)
T ss_pred cccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeCC---ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 0000000000000 0000001235999999999963 45999999999999999999999999999999999999
Q ss_pred CCCccEEEECCccCCCCCHHHHhcceEEEccCCC--ccc-ccHHHHhccCC-CCCCHHHHHHHHHHhcHH-HHHHhCCCC
Q 000851 1059 DPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPA--LFS-TTIYENIKYGN-EDASEIELMKATKAANAH-GFISRMPEG 1133 (1253)
Q Consensus 1059 ~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~--Lf~-gTIreNl~~g~-~~~~d~ei~~al~~a~l~-~~I~~lp~g 1133 (1253)
+|++|+|.++|. ++++||||++. +++ .|+++|+.... +...++++.++++..++. +.
T Consensus 370 ~p~~G~i~~~~~-----------~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------- 431 (530)
T PRK15064 370 EPDSGTVKWSEN-----------ANIGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDD------- 431 (530)
T ss_pred CCCCeEEEECCc-----------eEEEEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhH-------
Confidence 999999999873 57999999984 443 69999986532 222344566666666552 22
Q ss_pred ccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEE
Q 000851 1134 YQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKI 1212 (1253)
Q Consensus 1134 ldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I 1212 (1253)
......+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||+|
T Consensus 432 ----~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i 505 (530)
T PRK15064 432 ----IKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRI 505 (530)
T ss_pred ----hcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEE
Confidence 22334679999999999999999999999999999999999999999999886 4599999999999876 9999
Q ss_pred EEEeCCEEE-EecChhHHhh
Q 000851 1213 AVLQQGKVA-EIGSHEQLLR 1231 (1253)
Q Consensus 1213 ~Vl~~G~iv-e~Gt~~eLl~ 1231 (1253)
++|++|+++ ..|+++++++
T Consensus 506 ~~l~~g~i~~~~g~~~~~~~ 525 (530)
T PRK15064 506 IEITPDGVVDFSGTYEEYLR 525 (530)
T ss_pred EEEECCeEEEcCCCHHHHHH
Confidence 999999998 7899998876
No 89
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=7.4e-69 Score=715.72 Aligned_cols=212 Identities=27% Similarity=0.429 Sum_probs=181.1
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC---CCccEEEECCccCCCCCHHHH
Q 000851 1005 NIELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD---PISGTVLIDGYDIRTLNLRSL 1080 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~---p~~G~I~idG~di~~i~~~~l 1080 (1253)
.++++||+++|+.++ .+++|+|||++|+|||++||+||||||||||+++|.|..+ |++|+|.+||.++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 379999999996332 3579999999999999999999999999999999999998 78899999999985 257
Q ss_pred hcceEEEccCCC-cccccHHHHhccCC----C-CCCHHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1081 RRKIGLVQQEPA-LFSTTIYENIKYGN----E-DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1081 R~~i~~V~Qdp~-Lf~gTIreNl~~g~----~-~~~d~e----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
|++++||+|++. ++..|+||||.++. + +.++++ +.++++..++ .+..|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L-------~~~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEM-------ESYADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCC-------hhhCCCeeCCCCCCCCHHHh
Confidence 899999999876 45679999998742 1 223333 3445554444 34468999998889999999
Q ss_pred HHHHHHHHhccCCC-EEEEecccCCCChHHHHHHHHHHHHH-cCCceEEEEccCchhh--hccCEEEEEeCC-EEEEecC
Q 000851 1151 QRVAIARAILKNPS-ILLLDEATSALDTASENLIQEALDKL-MEGRTTIMVAHRLSTI--RNADKIAVLQQG-KVAEIGS 1225 (1253)
Q Consensus 1151 QrlaLARALlr~p~-ILlLDEaTS~LD~~te~~I~~~l~~~-~~~~TvI~IaHrl~ti--~~~D~I~Vl~~G-~ive~Gt 1225 (1253)
||++|||||+.+|+ ||+||||||+||+.+...|++.|++. .+|+|||+++|+++.. ..||++++|++| +++++|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 99999999999999999999999997 4689999999999973 569999999997 9999998
Q ss_pred hh
Q 000851 1226 HE 1227 (1253)
Q Consensus 1226 ~~ 1227 (1253)
+.
T Consensus 988 ~~ 989 (1394)
T TIGR00956 988 LG 989 (1394)
T ss_pred cc
Confidence 74
No 90
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.9e-67 Score=651.42 Aligned_cols=482 Identities=22% Similarity=0.337 Sum_probs=335.5
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
-|+++|++++|++ .+.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+||
T Consensus 6 ~l~i~~l~~~y~~-~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----------~~~i~ 73 (556)
T PRK11819 6 IYTMNRVSKVVPP-KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----------GIKVG 73 (556)
T ss_pred EEEEeeEEEEeCC-CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEEE
Confidence 4899999999972 13499999999999999999999999999999999999999999999975 24699
Q ss_pred EEeccCccCcc-cHHHHHhcCCCCC----------------C----------HHHHHHHHHHh-------CcHHHHhcCC
Q 000851 456 LVSQEPALFAT-SIANNILLGKEDA----------------S----------MDRVIEAAKAA-------NAHSFVEGLP 501 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~~----------------~----------~~~~~~~~~~~-------~~~~~i~~l~ 501 (1253)
||+|+|.+++. |++||+.++.... . ..++.+.++.+ .+.+.++.+
T Consensus 74 ~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 152 (556)
T PRK11819 74 YLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL- 152 (556)
T ss_pred EEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC-
Confidence 99999999875 9999998753100 0 00111111111 122233333
Q ss_pred CCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cC
Q 000851 502 DGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VD 580 (1253)
Q Consensus 502 ~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d 580 (1253)
|++ .......+||||||||++||||++.+|++||||||||+||+.+...+.+.|+++. .|+|+|||+++.+.. ||
T Consensus 153 -gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~d 228 (556)
T PRK11819 153 -RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVAG 228 (556)
T ss_pred -CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhcC
Confidence 332 2345567899999999999999999999999999999999999999999998873 599999999999976 79
Q ss_pred EEEEEeCCEEE-EeeCcchhhhcCchHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccc
Q 000851 581 TIMVLKNGQVV-ESGTHVDLISKGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSS 659 (1253)
Q Consensus 581 ~i~vl~~G~i~-~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1253)
+|++|++|+++ ..|++++..+....-.. . .. ...
T Consensus 229 ~i~~l~~g~i~~~~g~~~~~~~~~~~~~~---~------------------------------------~~---~~~--- 263 (556)
T PRK11819 229 WILELDRGRGIPWEGNYSSWLEQKAKRLA---Q------------------------------------EE---KQE--- 263 (556)
T ss_pred eEEEEeCCEEEEecCCHHHHHHHHHHHHH---H------------------------------------HH---HHH---
Confidence 99999999986 66776654321000000 0 00 000
Q ss_pred cCCCCCcchHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHH
Q 000851 660 DQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIP 739 (1253)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 739 (1253)
....
T Consensus 264 ---------------------------------------------------------~~~~------------------- 267 (556)
T PRK11819 264 ---------------------------------------------------------AARQ------------------- 267 (556)
T ss_pred ---------------------------------------------------------HHHH-------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 740 VYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFV 819 (1253)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~ 819 (1253)
..++ ++ ..
T Consensus 268 -----------------~~~~-----~~-----------------------------~~--------------------- 275 (556)
T PRK11819 268 -----------------KALK-----RE-----------------------------LE--------------------- 275 (556)
T ss_pred -----------------HHHH-----HH-----------------------------HH---------------------
Confidence 0000 00 00
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHH
Q 000851 820 IAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPN 899 (1253)
Q Consensus 820 ~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~ 899 (1253)
| .+ +. ... + .. ...
T Consensus 276 ------~-----------------------~~-------~~-~~~--------------~-------------~~--~~~ 289 (556)
T PRK11819 276 ------W-----------------------VR-------QS-PKA--------------R-------------QA--KSK 289 (556)
T ss_pred ------H-----------------------HH-------Hh-hhh--------------h-------------HH--HHH
Confidence 0 00 00 000 0 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 900 KQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPV 979 (1253)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i 979 (1253)
+ + .....+.
T Consensus 290 ~---~--------------------------------------------------------------------~~~~~~~ 298 (556)
T PRK11819 290 A---R--------------------------------------------------------------------LARYEEL 298 (556)
T ss_pred H---H--------------------------------------------------------------------HHHHHHh
Confidence 0 0 0000000
Q ss_pred HHHh-cccccCCC-CCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhcc
Q 000851 980 FGIL-YRKTAIQP-DDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRF 1057 (1253)
Q Consensus 980 ~~~~-~~~~~~~~-~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~ 1057 (1253)
.+.. ...++... ..+.. ....+..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~ 373 (556)
T PRK11819 299 LSEEYQKRNETNEIFIPPG--PRLGDKVIEAENLSKSFGD---RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQ 373 (556)
T ss_pred hcccccccCCCceeecCCC--CCCCCeEEEEEeEEEEECC---eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 0000 00000000 00000 0011235999999999963 4699999999999999999999999999999999999
Q ss_pred CCCCccEEEECCccCCCCCHHHHhcceEEEccCC-Cccc-ccHHHHhccCCCC----CCHHHHHHHHHHhcHHHHHHhCC
Q 000851 1058 YDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEP-ALFS-TTIYENIKYGNED----ASEIELMKATKAANAHGFISRMP 1131 (1253)
Q Consensus 1058 ~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp-~Lf~-gTIreNl~~g~~~----~~d~ei~~al~~a~l~~~I~~lp 1131 (1253)
++|++|+|.+++ ++ +|+||||++ .++. .|++||+.++... ..+.+..++++..++.+
T Consensus 374 ~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------ 436 (556)
T PRK11819 374 EQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKG------ 436 (556)
T ss_pred CCCCCeEEEECC-ce----------EEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCCh------
Confidence 999999999954 21 599999997 5654 5999999875321 11222233333333211
Q ss_pred CCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cC
Q 000851 1132 EGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-AD 1210 (1253)
Q Consensus 1132 ~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D 1210 (1253)
.........||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++. + .|+|+|||+++.+.. ||
T Consensus 437 ----~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d 510 (556)
T PRK11819 437 ----GDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIAT 510 (556)
T ss_pred ----hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCC
Confidence 1123344579999999999999999999999999999999999999999999986 3 499999999999866 99
Q ss_pred EEEEEeC-CEEEE-ecChhHHhhc
Q 000851 1211 KIAVLQQ-GKVAE-IGSHEQLLRK 1232 (1253)
Q Consensus 1211 ~I~Vl~~-G~ive-~Gt~~eLl~~ 1232 (1253)
+|++|++ |++.+ .|+++++++.
T Consensus 511 ~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 511 HILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred EEEEEECCCeEEEecCCHHHHHHH
Confidence 9999996 88874 6888888764
No 91
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=8.5e-67 Score=645.79 Aligned_cols=480 Identities=23% Similarity=0.340 Sum_probs=335.6
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
-|+++|++++|++. +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +..||
T Consensus 4 ~i~~~nls~~~~~~-~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i~ 71 (552)
T TIGR03719 4 IYTMNRVSKVVPPK-KEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKVG 71 (552)
T ss_pred EEEEeeEEEecCCC-CeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEEE
Confidence 48999999999722 3499999999999999999999999999999999999999999999975 24699
Q ss_pred EEeccCccCcc-cHHHHHhcCCCC------------------CC--------HHHHHHHHHHhCcH-------HHHhcCC
Q 000851 456 LVSQEPALFAT-SIANNILLGKED------------------AS--------MDRVIEAAKAANAH-------SFVEGLP 501 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~------------------~~--------~~~~~~~~~~~~~~-------~~i~~l~ 501 (1253)
||+|+|.+++. |++||+.++... .. .+++.++++.++.+ +.+..+
T Consensus 72 ~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 150 (552)
T TIGR03719 72 YLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL- 150 (552)
T ss_pred EEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC-
Confidence 99999998865 999999875311 00 11233333333322 233333
Q ss_pred CCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cC
Q 000851 502 DGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VD 580 (1253)
Q Consensus 502 ~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d 580 (1253)
|++ .......+||||||||++|||||+.+|++|||||||++||+.+...+.+.|.++ ++|+|+|||+++.+.. ||
T Consensus 151 -~l~-~~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~d 226 (552)
T TIGR03719 151 -RCP-PWDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVAG 226 (552)
T ss_pred -CCC-cccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcC
Confidence 332 134556789999999999999999999999999999999999999999999876 3699999999999976 79
Q ss_pred EEEEEeCCEEE-EeeCcchhhhcCchHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccc
Q 000851 581 TIMVLKNGQVV-ESGTHVDLISKGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSS 659 (1253)
Q Consensus 581 ~i~vl~~G~i~-~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1253)
+|++|++|+++ ..|++++...... .+. +... .+.
T Consensus 227 ~v~~l~~g~i~~~~g~~~~~~~~~~-------~~~----------------------------------~~~~-~~~--- 261 (552)
T TIGR03719 227 WILELDRGRGIPWEGNYSSWLEQKE-------KRL----------------------------------EQEE-KEE--- 261 (552)
T ss_pred eEEEEECCEEEEecCCHHHHHHHHH-------HHH----------------------------------HHHH-HHH---
Confidence 99999999976 5676665432100 000 0000 000
Q ss_pred cCCCCCcchHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHH
Q 000851 660 DQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIP 739 (1253)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 739 (1253)
.
T Consensus 262 ---------------------------------------------------------~---------------------- 262 (552)
T TIGR03719 262 ---------------------------------------------------------S---------------------- 262 (552)
T ss_pred ---------------------------------------------------------H----------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 740 VYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFV 819 (1253)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~ 819 (1253)
+....
T Consensus 263 ------------------~~~~~--------------------------------------------------------- 267 (552)
T TIGR03719 263 ------------------ARQKA--------------------------------------------------------- 267 (552)
T ss_pred ------------------HHHHH---------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHH
Q 000851 820 IAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPN 899 (1253)
Q Consensus 820 ~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~ 899 (1253)
..+.. ..+... ..+ + +. ...
T Consensus 268 -------------------------------------~~~~~----~~~~~~--------~~~-------~--~~--~~~ 287 (552)
T TIGR03719 268 -------------------------------------LKREL----EWVRSS--------PKA-------R--QA--KSK 287 (552)
T ss_pred -------------------------------------HHHHH----HHHHhh--------hhh-------H--HH--HHH
Confidence 00000 000000 000 0 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 900 KQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPV 979 (1253)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i 979 (1253)
. + .....+.
T Consensus 288 ~---~--------------------------------------------------------------------~~~~~~~ 296 (552)
T TIGR03719 288 A---R--------------------------------------------------------------------LARYEEL 296 (552)
T ss_pred H---H--------------------------------------------------------------------HHHHHhh
Confidence 0 0 0000000
Q ss_pred HH-HhcccccCC-CCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhcc
Q 000851 980 FG-ILYRKTAIQ-PDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRF 1057 (1253)
Q Consensus 980 ~~-~~~~~~~~~-~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~ 1057 (1253)
.+ .....++.. ...+.. ....+..|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~ 371 (552)
T TIGR03719 297 LSQEFQKRNETAEIYIPPG--PRLGDKVIEAENLSKGFGD---KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQ 371 (552)
T ss_pred hhhcccccCCCceeecCCC--CCCCCeEEEEeeEEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCC
Confidence 00 000000000 000000 0011235999999999963 4699999999999999999999999999999999999
Q ss_pred CCCCccEEEECCccCCCCCHHHHhcceEEEccCCC-ccc-ccHHHHhccCCCC--CC--HHHHHHHHHHhcHHHHHHhCC
Q 000851 1058 YDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPA-LFS-TTIYENIKYGNED--AS--EIELMKATKAANAHGFISRMP 1131 (1253)
Q Consensus 1058 ~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~-Lf~-gTIreNl~~g~~~--~~--d~ei~~al~~a~l~~~I~~lp 1131 (1253)
++|++|+|.+++ ++ +|+|+||++. +++ .|++||+.++... .. +.+..++++..+
T Consensus 372 ~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~--------- 431 (552)
T TIGR03719 372 EQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFN--------- 431 (552)
T ss_pred CCCCCeEEEECC-ce----------EEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCC---------
Confidence 999999999954 21 6999999973 554 5999999875321 11 222223333333
Q ss_pred CCccc-cccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-c
Q 000851 1132 EGYQS-HVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-A 1209 (1253)
Q Consensus 1132 ~gldt-~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~ 1209 (1253)
++. ........||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .|||+|||+++.+.. |
T Consensus 432 --l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~viivsHd~~~~~~~~ 507 (552)
T TIGR03719 432 --FKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA--GCAVVISHDRWFLDRIA 507 (552)
T ss_pred --CChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHhC
Confidence 221 1233446799999999999999999999999999999999999999999999873 499999999999876 9
Q ss_pred CEEEEEeC-CEEEE-ecChhHHhh
Q 000851 1210 DKIAVLQQ-GKVAE-IGSHEQLLR 1231 (1253)
Q Consensus 1210 D~I~Vl~~-G~ive-~Gt~~eLl~ 1231 (1253)
|+|++|++ |++++ .|+++++.+
T Consensus 508 d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 508 THILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred CEEEEEECCCeEEEeCCCHHHHHH
Confidence 99999997 68874 588877765
No 92
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=9.7e-66 Score=644.49 Aligned_cols=532 Identities=17% Similarity=0.134 Sum_probs=441.5
Q ss_pred HHHHHHHhhchhhH----HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCCCcchhhhhHHHHHHHHHHHHHHHHHH
Q 000851 36 SFLSLFAAADKIDC----VLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVS 111 (1253)
Q Consensus 36 ~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (1253)
.++++++|++|+++ ..+++.+++.++.+++....|++.+.++|.+... +...+...+..++++++.+.++..+.
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~--~~~~f~~~l~~~~l~~~~~~~~~~~~ 155 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRR--SPRNFAWILFKWFLIAPPASFINSAI 155 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46678888888754 2456677777888888888999999999987532 11112111222333334444555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 112 AWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVG 191 (1253)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (1253)
.++..++......++..++|.+++++....++.+||+ ++|++++|+++|++.+.+.+.+.+..++..++.+++.++++
T Consensus 156 ~~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~--~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L 233 (659)
T TIGR00954 156 KYLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS--RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKL 233 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC--CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777888888999999999999999999999985 68999999999999999999999999999999999888888
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000851 192 FT-SVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALK 270 (1253)
Q Consensus 192 ~~-~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~ 270 (1253)
+. ++|.+++++++.+|+..++..++.+++.+...+.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+
T Consensus 234 ~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~ 313 (659)
T TIGR00954 234 LTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVE 313 (659)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 76 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-c----CCCChHHHHH-HHHH---HHHHHHHHHHHHHHHHHH
Q 000851 271 QGKKSGVAKGIGVGLTYGLLFC--AWALLLWYAGILVR-H----GDTNGGKAFT-TIIN---VIFSGFALGQAAPNLAAI 339 (1253)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~v~-~----g~lt~g~~~~-~~~~---~~~~~~~l~~l~~~~~~~ 339 (1253)
...+..+..+...++..++... ..++.++.|...+. + |.+|.|.+++ ++.+ +.....|+..+...+..+
T Consensus 314 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i 393 (659)
T TIGR00954 314 HLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDM 393 (659)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888888777543 23333334443332 2 7899998776 3333 334467899999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCC----C--CC--CC-------------CCCCCCCCcEEEEEEEEECCCCCCcccccce
Q 000851 340 AKGKAAAANIISIIKENSHSSER----P--GD--DG-------------ITLPKLAGQIEFSEVCFAYPSRPHMVFENLN 398 (1253)
Q Consensus 340 ~~~~~a~~ri~~~l~~~~~~~~~----~--~~--~~-------------~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~ 398 (1253)
+++.++.+|++++++.+++.+.. + .+ +. .......+.|+++||+|+|+++ +++|+|+|
T Consensus 394 ~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~is 472 (659)
T TIGR00954 394 TRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLS 472 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-Ceeeecce
Confidence 99999999999999865432100 0 00 00 0011123569999999999743 35999999
Q ss_pred EEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCC--
Q 000851 399 FSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGK-- 476 (1253)
Q Consensus 399 ~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~-- 476 (1253)
|++++||+++|+||||||||||+++|+|+++|++|+|.+++ |++|+||+|+|++|++|++|||.++.
T Consensus 473 l~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~ 541 (659)
T TIGR00954 473 FEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSS 541 (659)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCCh
Confidence 99999999999999999999999999999999999999874 56899999999999999999999974
Q ss_pred -----CCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHH
Q 000851 477 -----EDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEL 551 (1253)
Q Consensus 477 -----~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~ 551 (1253)
++.+++++.++++.+++++++++ |.|+||..+ .+.+||||||||++||||++++|+++|||||||+||+++++
T Consensus 542 ~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~ 619 (659)
T TIGR00954 542 EDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEG 619 (659)
T ss_pred hhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHH
Confidence 34567889999999999999988 999999986 56799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeC
Q 000851 552 IVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKN 587 (1253)
Q Consensus 552 ~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~ 587 (1253)
.+.+.+++. ++|+|+||||+++++.||+|++|+.
T Consensus 620 ~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 620 YMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 999999874 8999999999999999999999973
No 93
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.3e-65 Score=633.64 Aligned_cols=472 Identities=19% Similarity=0.250 Sum_probs=378.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 738 IPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTA 817 (1253)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~ 817 (1253)
.++.++..++...++.++..++|.++|+++++.|++||+ ++++|++++|+++|++.+...+. .+..++.+++.++++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~--~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~ 138 (547)
T PRK10522 62 MAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIE--QLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGS 138 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHh--ccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 446677888899999999999999999999999999997 48899999999999999998765 477788888889999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcH---HHHHHHHHHH
Q 000851 818 FVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIE---KRISIQFASE 894 (1253)
Q Consensus 818 ~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e---~~~~~~~~~~ 894 (1253)
+++++.++|.+++++++++|+.+++.+...+..++..++.++...+..+.+.|.++|+++++ ++.+ +.+.+++.+.
T Consensus 139 ~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~ 217 (547)
T PRK10522 139 AAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPD 217 (547)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHH
Confidence 99999999999999999999988877777777777777788888999999999999999995 4443 4567888887
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 895 LSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQ 974 (1253)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1253)
.++..+...+..........+...+..+..++.++++..+ +..+.+.......+......++..+...++.+..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~ 294 (547)
T PRK10522 218 AQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQV 294 (547)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766665555444433333333333333333333322 1122233222233333345688888889999999999
Q ss_pred HHHHHHHHhcccccCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHH
Q 000851 975 ALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLV 1054 (1253)
Q Consensus 975 a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL 1054 (1253)
+.+|+.++.+.+++.+.+. ..+ .+..+.|+++||+|+||+ +.++|+|+||+|+|||++|||||||||||||+++|
T Consensus 295 a~~ri~~l~~~~~~~~~~~--~~~-~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll 369 (547)
T PRK10522 295 AFNKLNKLALAPYKAEFPR--PQA-FPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLL 369 (547)
T ss_pred HHHHHHHHhcccccccccc--ccc-cCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 9999998865432211111 111 111357999999999983 34699999999999999999999999999999999
Q ss_pred hccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCc
Q 000851 1055 MRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGY 1134 (1253)
Q Consensus 1055 ~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gl 1134 (1253)
+|+|+|++|+|.+||+|+++++.+.+|++|+||||||.+|++|+++| + ++.++++++++++.+++.+++.. |+|.
T Consensus 370 ~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 444 (547)
T PRK10522 370 TGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLEL-EDGR 444 (547)
T ss_pred hCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhhc-cccC
Confidence 99999999999999999999999999999999999999999999999 2 45678888888888877666542 4442
Q ss_pred cccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhccCEE
Q 000851 1135 QSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKI 1212 (1253)
Q Consensus 1135 dt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I 1212 (1253)
.+|.+||||||||++||||++++|+|||||||||+||+++|+.+.+.+.+.. +++|+|+||||+++++.||+|
T Consensus 445 -----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i 519 (547)
T PRK10522 445 -----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRL 519 (547)
T ss_pred -----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEE
Confidence 1478999999999999999999999999999999999999999999998654 489999999999999999999
Q ss_pred EEEeCCEEEEe-cChhHHhh
Q 000851 1213 AVLQQGKVAEI-GSHEQLLR 1231 (1253)
Q Consensus 1213 ~Vl~~G~ive~-Gt~~eLl~ 1231 (1253)
++|++|+++|. |++.+-..
T Consensus 520 ~~l~~G~i~e~~~~~~~~~~ 539 (547)
T PRK10522 520 LEMRNGQLSELTGEERDAAS 539 (547)
T ss_pred EEEECCEEEEecCCchhhhh
Confidence 99999999987 66655443
No 94
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-65 Score=641.34 Aligned_cols=201 Identities=27% Similarity=0.422 Sum_probs=165.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
-|+++||+++|+ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .++
T Consensus 312 ~l~~~~l~~~y~---~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYG---DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeC---CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 599999999996 346999999999999999999999999999999999999999999999741 269
Q ss_pred EEEccCC--Cccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000851 1085 GLVQQEP--ALFS-TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 1161 (1253)
Q Consensus 1085 ~~V~Qdp--~Lf~-gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr 1161 (1253)
+|++|++ .+.. .|+.+|+....+...++++.+.++..++.. ..+......||||||||++|||||+.
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~----------~~~~~~~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQG----------DKVTEETRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCCh----------hHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 9999985 3443 488888742222223344555555544421 11223345799999999999999999
Q ss_pred CCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEE-EecChhHHhh
Q 000851 1162 NPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVA-EIGSHEQLLR 1231 (1253)
Q Consensus 1162 ~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~iv-e~Gt~~eLl~ 1231 (1253)
+|++|||||||++||+.+.+.+.+.|+++ + .|||+|||+++.+.. ||+|++|++|+++ ..|++++..+
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 99999999999999999999999999986 4 499999999999966 9999999999998 6799988743
No 95
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.3e-64 Score=668.52 Aligned_cols=213 Identities=23% Similarity=0.392 Sum_probs=177.5
Q ss_pred cEEEEeEEEECCCC----------CCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC--CccEEEECCccC
Q 000851 1005 NIELRNVSFKYPVR----------PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP--ISGTVLIDGYDI 1072 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~----------~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p--~~G~I~idG~di 1072 (1253)
.+.|+||++..+.. ....+|+|+|++|+|||.+||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 69999999987532 123699999999999999999999999999999999999874 689999999886
Q ss_pred CCCCHHHHhcceEEEccCCCccc-ccHHHHhccCC----C-CCCHHH----HHHHHHHhcHHHHHHhCCCCccccccCCC
Q 000851 1073 RTLNLRSLRRKIGLVQQEPALFS-TTIYENIKYGN----E-DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRG 1142 (1253)
Q Consensus 1073 ~~i~~~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~----~-~~~d~e----i~~al~~a~l~~~I~~lp~gldt~vge~G 1142 (1253)
+ ...+|+.+|||+|++.+++ .|++|||.++. + +.+.++ +.++++..++.+ -.|+.+|..+
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~-------~~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDN-------LKDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChh-------HhCCccCCCC
Confidence 4 3457788999999988776 59999998642 1 223322 445565555543 2467777544
Q ss_pred -CCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchh-h-hccCEEEEEeC-
Q 000851 1143 -VQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLST-I-RNADKIAVLQQ- 1217 (1253)
Q Consensus 1143 -~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t-i-~~~D~I~Vl~~- 1217 (1253)
..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +|+|||+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 6799999999999999999999999999999999999999999999975 58999999999984 4 56999999996
Q ss_pred CEEEEecChh
Q 000851 1218 GKVAEIGSHE 1227 (1253)
Q Consensus 1218 G~ive~Gt~~ 1227 (1253)
|+++.+|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999864
No 96
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.9e-64 Score=629.91 Aligned_cols=201 Identities=24% Similarity=0.439 Sum_probs=164.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
-|+++||+++|++ .++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 4999999999963 46999999999999999999999999999999999999999999999 4432 59
Q ss_pred EEEccCC-Cccc-ccHHHHhccCCCCC--C--HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1085 GLVQQEP-ALFS-TTIYENIKYGNEDA--S--EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1085 ~~V~Qdp-~Lf~-gTIreNl~~g~~~~--~--d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
+|++|++ .+++ .|+.||+.++.+.. . +.++.+.++..++. ++..+. ....||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~----~~~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFH------PKRAMT----PVKALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCC------HHHHhC----hhhhCCHHHHHHHHHHHH
Confidence 9999986 4655 49999998754321 1 22233333333221 011233 345799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEe-CCEEEEe-cChhHHhh
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ-QGKVAEI-GSHEQLLR 1231 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~-~G~ive~-Gt~~eLl~ 1231 (1253)
|+.+|++|||||||++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||+|++|+ +|+++++ |++++.+.
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999876 4599999999999865 99999998 8999875 78887754
No 97
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-64 Score=585.63 Aligned_cols=454 Identities=26% Similarity=0.415 Sum_probs=356.3
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCH-HHHhccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL-KWLREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~i 454 (1253)
-++++|++++|++- ++|+|+||++.+||++||+|.||+|||||+|+|+|.|+|++|+|.+||+++.-.++ +.....|
T Consensus 8 ll~~~~i~K~FggV--~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 8 LLELRGISKSFGGV--KALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred eeeeecceEEcCCc--eeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 48899999999853 49999999999999999999999999999999999999999999999999986655 4566689
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCCCC------HHHHHHHHHHhCcHHHHhcCC--CCccccccCCCCCCChHHHHHHHH
Q 000851 455 GLVSQEPALFAT-SIANNILLGKEDAS------MDRVIEAAKAANAHSFVEGLP--DGYQTQVGEGGTQLSGGQKQRIAI 525 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~~~------~~~~~~~~~~~~~~~~i~~l~--~g~~t~~g~~g~~LSgGq~qriai 525 (1253)
+.|+||..|++. ||.|||.+|++... ..+..+.++ +.+.++- ...++.+ .+||+||||.|+|
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~-----~~l~~lg~~~~~~~~v----~~LsiaqrQ~VeI 156 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRAR-----ELLARLGLDIDPDTLV----GDLSIAQRQMVEI 156 (500)
T ss_pred EEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHH-----HHHHHcCCCCChhhhh----hhCCHHHHHHHHH
Confidence 999999999976 99999999986532 233333322 2333331 1234444 5799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCc-chhhhc
Q 000851 526 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTH-VDLISK 602 (1253)
Q Consensus 526 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~-~~l~~~ 602 (1253)
|||+..+++|+|||||||+|+....+.+.+.+++++ +|.++|+||||++++.. ||||.||+||+.+..++. .++-.
T Consensus 157 ArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~- 235 (500)
T COG1129 157 ARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSE- 235 (500)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCH-
Confidence 999999999999999999999999999999999986 68999999999999876 899999999999876531 11100
Q ss_pred CchHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHHHHHHhhchhHH
Q 000851 603 GGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPY 682 (1253)
Q Consensus 603 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1253)
. .
T Consensus 236 -----------------------------------------------~--------------------~----------- 237 (500)
T COG1129 236 -----------------------------------------------D--------------------E----------- 237 (500)
T ss_pred -----------------------------------------------H--------------------H-----------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 683 AVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLS 762 (1253)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 762 (1253)
++..
T Consensus 238 ------------------------lv~~---------------------------------------------------- 241 (500)
T COG1129 238 ------------------------LVRL---------------------------------------------------- 241 (500)
T ss_pred ------------------------HHHH----------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000851 763 MFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGA 842 (1253)
Q Consensus 763 ~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~ 842 (1253)
-.|+
T Consensus 242 ------------------MvGr---------------------------------------------------------- 245 (500)
T COG1129 242 ------------------MVGR---------------------------------------------------------- 245 (500)
T ss_pred ------------------hhCc----------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 843 FVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLC 922 (1253)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1253)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccc
Q 000851 923 SYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEI 1002 (1253)
Q Consensus 923 ~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1253)
++-+..+. . ..+ ...
T Consensus 246 ----------------------------------------------------------~~~~~~~~-~-~~~-----~~~ 260 (500)
T COG1129 246 ----------------------------------------------------------ELEDLFPE-P-PEE-----GIG 260 (500)
T ss_pred ----------------------------------------------------------chhhhccc-c-ccc-----CCC
Confidence 00000000 0 000 001
Q ss_pred cCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH-HHh
Q 000851 1003 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR-SLR 1081 (1253)
Q Consensus 1003 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~-~lR 1081 (1253)
...++++|++.. ..++|+||++++||++||.|-=|||+|-++++|+|..++.+|+|.+||.++.--++. ..+
T Consensus 261 ~~~l~v~~l~~~-------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~ 333 (500)
T COG1129 261 EPVLEVRNLSGG-------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDAIK 333 (500)
T ss_pred CcEEEEecCCCC-------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHHHH
Confidence 123778888742 147999999999999999999999999999999999999999999999998877654 789
Q ss_pred cceEEEccCCC----cccccHHHHhccCC-CCCCHH-HHHHHHHHhcHHHHHHhCCC---CccccccCCCCCCChhHHHH
Q 000851 1082 RKIGLVQQEPA----LFSTTIYENIKYGN-EDASEI-ELMKATKAANAHGFISRMPE---GYQSHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1082 ~~i~~V~Qdp~----Lf~gTIreNl~~g~-~~~~d~-ei~~al~~a~l~~~I~~lp~---gldt~vge~G~~LSgGQkQr 1152 (1253)
..|+|||-|.. +...||++|+.+.. ...+.. -+....++.-..+++.+|.- ..+.++ .+||||.+||
T Consensus 334 ~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v----~~LSGGNQQK 409 (500)
T COG1129 334 AGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI----GTLSGGNQQK 409 (500)
T ss_pred cCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh----hcCCchhhhh
Confidence 99999998874 45679999998752 111100 24455566667778877632 233344 5799999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhh-ccCEEEEEeCCEEEEecChh
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHE 1227 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~ 1227 (1253)
++|||+|..+|+||||||||.++|..+.+.|.+.|+++. +|++||+||..++++. .||||+||.+|+++..=+.+
T Consensus 410 VvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~ 486 (500)
T COG1129 410 VVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDRE 486 (500)
T ss_pred HHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEeccc
Confidence 999999999999999999999999999999999999975 6899999999999986 59999999999998744433
No 98
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.8e-64 Score=629.06 Aligned_cols=200 Identities=30% Similarity=0.411 Sum_probs=164.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|++ ..++|+|+||+|++||++||+||||||||||+++|+|+.+|++|+|.+++ +.+|
T Consensus 508 ~L~~~~ls~~y~~--~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 508 IISFSDASFGYPG--GPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred eEEEEeeEEEeCC--CCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 5999999999963 23589999999999999999999999999999999999999999999875 3479
Q ss_pred EEEccCCCcccccHHHHhcc----CCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000851 1085 GLVQQEPALFSTTIYENIKY----GNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 1160 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~gTIreNl~~----g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALl 1160 (1253)
+|++|++. ...++.+|... ..+..+++++.++++..++.+.. .......||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~----------~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNL----------ALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHH----------hcCCccccCHHHHHHHHHHHHHh
Confidence 99999973 22345555321 12234566777777777664211 12234679999999999999999
Q ss_pred cCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEE-EecChhHHh
Q 000851 1161 KNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVA-EIGSHEQLL 1230 (1253)
Q Consensus 1161 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~iv-e~Gt~~eLl 1230 (1253)
.+|++|||||||++||+.+.+.+.+.|.+. + .|+|+|||+++.+.. ||+|++|++|+++ ..|++++..
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999999875 3 499999999999976 9999999999998 568877653
No 99
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.7e-61 Score=603.13 Aligned_cols=529 Identities=17% Similarity=0.121 Sum_probs=433.5
Q ss_pred HHHHHHHhhchhH-----HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000851 669 IWELLKLNAAEWP-----YAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLL 743 (1253)
Q Consensus 669 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 743 (1253)
+.+++++.+++|. .+++.+++.++........++..+.+++.....+..........+.++++++.++..+..++
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~ 158 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYL 158 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666667665 45566666666666666777777777776654332222222334444555556666667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 744 QHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFI 823 (1253)
Q Consensus 744 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~ 823 (1253)
..++......++..++|+..+++....+++|||. ++|++.+|+++|++.+.+.+...+..++..++.++++++.++.
T Consensus 159 ~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 159 LKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778888888899999999999988889999973 6899999999999999999999999999999999988887776
Q ss_pred -HhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHH
Q 000851 824 -LSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQA 902 (1253)
Q Consensus 824 -~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~ 902 (1253)
++|.+++++++.+|+..++..+..+.+.+...+.++..++..+.+.|.++|+++|++|+.++.+.+++.+..++..+..
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998889889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-h----cCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Q 000851 903 LLRGHISGFGYGVSQLLSLC--SYALGLWYASVLIK-Q----KGSNFGDIMKSFMV----LIITALAVAETLALAPDIVK 971 (1253)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~lv~-~----~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 971 (1253)
.+..++.++...+..++... ..++.++.|...+. . |.++.|.++..+.. ......++..+.....++..
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~ 395 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTR 395 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888887643 22223333343332 2 67888877664332 34456788888899999999
Q ss_pred HHHHHHHHHHHhcccccCC------CCCCC---C-------------cccccccCcEEEEeEEEECCCCCCcccccceeE
Q 000851 972 GSQALGPVFGILYRKTAIQ------PDDPA---S-------------KEVTEIKGNIELRNVSFKYPVRPDITIFENLNL 1029 (1253)
Q Consensus 972 ~~~a~~~i~~~~~~~~~~~------~~~~~---~-------------~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl 1029 (1253)
+..+.+|+.++++.+++.. +..+. . .......+.|+++||+|+||+ +.++|+|+||
T Consensus 396 ~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl 473 (659)
T TIGR00954 396 LAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceE
Confidence 9999999999986543211 00000 0 001113356999999999973 3469999999
Q ss_pred EEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCC---
Q 000851 1030 KVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGN--- 1106 (1253)
Q Consensus 1030 ~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~--- 1106 (1253)
+|++||++||+||||||||||+++|+|+++|++|+|.+|+ |++++||||+|.+|++|++|||.++.
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~ 542 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSE 542 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999874 67899999999999999999999864
Q ss_pred ----CCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHH
Q 000851 1107 ----EDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENL 1182 (1253)
Q Consensus 1107 ----~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~ 1182 (1253)
++.++++++++++.+++++++.+ |.||||..+ .+.+||||||||++|||||+++|++||||||||+||+++++.
T Consensus 543 ~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~ 620 (659)
T TIGR00954 543 DMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGY 620 (659)
T ss_pred hhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 34578899999999999999988 999999987 567999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceEEEEccCchhhhccCEEEEEeC
Q 000851 1183 IQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQ 1217 (1253)
Q Consensus 1183 I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~ 1217 (1253)
+.+.+++. ++|+|+||||+++++.||+|++|+.
T Consensus 621 l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 621 MYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999874 8999999999999999999999973
No 100
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=6.9e-64 Score=615.70 Aligned_cols=437 Identities=23% Similarity=0.358 Sum_probs=319.5
Q ss_pred EEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEE-----------ECCeeCCCCCHH
Q 000851 380 SEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKIL-----------LDGHDLKSLQLK 448 (1253)
Q Consensus 380 ~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~-----------~~g~~~~~~~~~ 448 (1253)
++++++|+.+ ..+|++++ ++++||+++|+||||||||||+++|+|+++|++|+|. ++|.++.++..+
T Consensus 77 ~~~~~~yg~~-~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~ 154 (590)
T PRK13409 77 EEPVHRYGVN-GFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKK 154 (590)
T ss_pred cCceEEecCC-ceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHH
Confidence 3489999742 24899999 9999999999999999999999999999999999997 899988654321
Q ss_pred H--Hhcc----cEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 449 W--LREQ----MGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 449 ~--~r~~----i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
. .+.+ +.|++|.|.+|.+|++||+.... ..+++.++++..++ +........+||||||||
T Consensus 155 ~~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~~---~~~~~~~~l~~l~l-----------~~~~~~~~~~LSgGe~qr 220 (590)
T PRK13409 155 LYNGEIKVVHKPQYVDLIPKVFKGKVRELLKKVD---ERGKLDEVVERLGL-----------ENILDRDISELSGGELQR 220 (590)
T ss_pred HhccCcceeecccchhhhhhhhcchHHHHHHhhh---HHHHHHHHHHHcCC-----------chhhcCChhhCCHHHHHH
Confidence 1 1123 44555667778889999997421 12344444444433 333344556899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
++|||||+++|++||||||||+||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|. |
T Consensus 221 v~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~~----g------- 289 (590)
T PRK13409 221 VAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGEP----G------- 289 (590)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc----c-------
Confidence 99999999999999999999999999999999999998668999999999999876 79999997641 1
Q ss_pred cCchHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHHHHHHhhchhH
Q 000851 602 KGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWP 681 (1253)
Q Consensus 602 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1253)
.|... ..+ . .. +.
T Consensus 290 ---~~g~~---------~~~--------------------------------~-------------~~-------~~--- 302 (590)
T PRK13409 290 ---AYGVV---------SKP--------------------------------K-------------GV-------RV--- 302 (590)
T ss_pred ---cccee---------cch--------------------------------h-------------HH-------HH---
Confidence 11000 000 0 00 00
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 682 YAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRL 761 (1253)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 761 (1253)
+ ...+. ..
T Consensus 303 ------------~----------------------------i~~~~----------------~~---------------- 310 (590)
T PRK13409 303 ------------G----------------------------INEYL----------------KG---------------- 310 (590)
T ss_pred ------------h----------------------------HHHHH----------------Hh----------------
Confidence 0 00000 00
Q ss_pred HHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000851 762 SMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIG 841 (1253)
Q Consensus 762 ~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~ 841 (1253)
|
T Consensus 311 -------------~------------------------------------------------------------------ 311 (590)
T PRK13409 311 -------------Y------------------------------------------------------------------ 311 (590)
T ss_pred -------------c------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 842 AFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSL 921 (1253)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (1253)
... |. ++ + +
T Consensus 312 --------~~~-----------------e~------~~-----------~--------~--------------------- 320 (590)
T PRK13409 312 --------LPE-----------------EN------MR-----------I--------R--------------------- 320 (590)
T ss_pred --------chh-----------------hh------hh-----------c--------c---------------------
Confidence 000 00 00 0 0
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCccccc
Q 000851 922 CSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTE 1001 (1253)
Q Consensus 922 ~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~ 1001 (1253)
. ..+ .+ ...+ +.... .
T Consensus 321 ----------------~--------------------------------------~~~-~~-~~~~--~~~~~------~ 336 (590)
T PRK13409 321 ----------------P--------------------------------------EPI-EF-EERP--PRDES------E 336 (590)
T ss_pred ----------------c--------------------------------------cCc-ce-ecCC--Ccccc------C
Confidence 0 000 00 0000 00000 0
Q ss_pred ccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHh
Q 000851 1002 IKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLR 1081 (1253)
Q Consensus 1002 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR 1081 (1253)
...-++++|++++|+. ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++
T Consensus 337 ~~~~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~------------- 399 (590)
T PRK13409 337 RETLVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE------------- 399 (590)
T ss_pred CceEEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------
Confidence 1124899999999962 24899999999999999999999999999999999999999999986
Q ss_pred cceEEEccCCCc-ccccHHHHhccCCCCCC-HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000851 1082 RKIGLVQQEPAL-FSTTIYENIKYGNEDAS-EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 1159 (1253)
Q Consensus 1082 ~~i~~V~Qdp~L-f~gTIreNl~~g~~~~~-d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARAL 1159 (1253)
.+++|+||++.+ ++.|++||+.++..... ...+.++++..++.+... ....+||||||||++|||||
T Consensus 400 ~~i~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~-----------~~~~~LSGGe~QRvaiAraL 468 (590)
T PRK13409 400 LKISYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLD-----------KNVKDLSGGELQRVAIAACL 468 (590)
T ss_pred eeEEEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHh-----------CCcccCCHHHHHHHHHHHHH
Confidence 159999999875 46799999987532222 233455666666544332 33457999999999999999
Q ss_pred ccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecC
Q 000851 1160 LKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1225 (1253)
Q Consensus 1160 lr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt 1225 (1253)
+++|+||||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||||++|++ ++...|+
T Consensus 469 ~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 469 SRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 999999999999999999999999999998753 7899999999999865 999999965 8777665
No 101
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.3e-62 Score=551.54 Aligned_cols=462 Identities=26% Similarity=0.462 Sum_probs=358.9
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCC-CCHHHHhccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS-LQLKWLREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~-~~~~~~r~~i 454 (1253)
.++++++++.||+ ..+++||||++++||++||.|+||+|||||+++|.|+|+|++|+|++||++++- -+.+..|..|
T Consensus 4 ~l~~~~itK~f~~--~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~GI 81 (501)
T COG3845 4 ALEMRGITKRFPG--VVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLGI 81 (501)
T ss_pred eEEEeccEEEcCC--EEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcCC
Confidence 5899999999983 449999999999999999999999999999999999999999999999999984 4566788899
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 455 GLVSQEPALFAT-SIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
|+|+|++.|++. |+.|||.+|.+......+........+.+..+++ |++-...+....||-||||||.|-+||+++|
T Consensus 82 GMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~a 159 (501)
T COG3845 82 GMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRGA 159 (501)
T ss_pred cEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcCC
Confidence 999999999977 9999999998753110111111111122333333 5555556666789999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcCchHHHHHH
Q 000851 534 KILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGGEYAALVN 611 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~~~ 611 (1253)
++||||||||-|-|...+.+.+.++++. .|+|+|+|||++.++.. |||+.||.+|+++..-++ .-
T Consensus 160 ~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~~----------- 226 (501)
T COG3845 160 RLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--VA----------- 226 (501)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--CC-----------
Confidence 9999999999999999999999999985 58999999999999987 899999999998653210 00
Q ss_pred hhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCcchHHHHHHHhhchhHHHHHHHHHHH
Q 000851 612 LQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAI 691 (1253)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1253)
+ ... . .+ -.
T Consensus 227 ---------------------~--------------~t~---~-------------el---a~----------------- 235 (501)
T COG3845 227 ---------------------E--------------TTE---E-------------EL---AE----------------- 235 (501)
T ss_pred ---------------------C--------------CCH---H-------------HH---HH-----------------
Confidence 0 000 0 00 00
Q ss_pred HHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 000851 692 LAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNE 771 (1253)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~ 771 (1253)
+.
T Consensus 236 ---------------lM--------------------------------------------------------------- 237 (501)
T COG3845 236 ---------------LM--------------------------------------------------------------- 237 (501)
T ss_pred ---------------Hh---------------------------------------------------------------
Confidence 00
Q ss_pred CccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000851 772 IGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLK 851 (1253)
Q Consensus 772 ~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~ 851 (1253)
.|
T Consensus 238 ----------vG-------------------------------------------------------------------- 239 (501)
T COG3845 238 ----------VG-------------------------------------------------------------------- 239 (501)
T ss_pred ----------cC--------------------------------------------------------------------
Confidence 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 852 GFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYA 931 (1253)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 931 (1253)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccCcEEEEeE
Q 000851 932 SVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNV 1011 (1253)
Q Consensus 932 ~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~V 1011 (1253)
.++ .......+. .+.+.-++++|+
T Consensus 240 ------~~v-------------------------------------------~~~~~~~~~-------~pg~~vL~V~~L 263 (501)
T COG3845 240 ------REV-------------------------------------------VLRVVKPPS-------TPGEVVLEVEDL 263 (501)
T ss_pred ------Ccc-------------------------------------------ccccccCCC-------CCCCeEEEEeee
Confidence 000 000000000 111224899999
Q ss_pred EEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccC-CCCCHHHHh-cceEEEcc
Q 000851 1012 SFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDI-RTLNLRSLR-RKIGLVQQ 1089 (1253)
Q Consensus 1012 sf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di-~~i~~~~lR-~~i~~V~Q 1089 (1253)
+..-+ + +.+.+++|||+|++||++||.|-.|-|-+.|+.+|.|+.+|.+|+|.++|.|+ ...++..+| ..++|||.
T Consensus 264 ~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPe 341 (501)
T COG3845 264 SVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERRRLGLAYVPE 341 (501)
T ss_pred EeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHHhcCCccCCh
Confidence 98643 2 34679999999999999999999999999999999999999999999999997 677777655 57999999
Q ss_pred CCC----cccccHHHHhccCCCC---------CCHHHHHHHHHHhcHHHHHHhC---CCCccccccCCCCCCChhHHHHH
Q 000851 1090 EPA----LFSTTIYENIKYGNED---------ASEIELMKATKAANAHGFISRM---PEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1090 dp~----Lf~gTIreNl~~g~~~---------~~d~ei~~al~~a~l~~~I~~l---p~gldt~vge~G~~LSgGQkQrl 1153 (1253)
|.+ ..+-|+.||+.++.-+ .+..++.+.+ .+.++.+ +.+.+++ ..+||||+.||+
T Consensus 342 dR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a-----~~li~~fdVr~~~~~~~----a~~LSGGNqQK~ 412 (501)
T COG3845 342 DRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFA-----RELIEEFDVRAPSPDAP----ARSLSGGNQQKL 412 (501)
T ss_pred hhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHH-----HHHHHHcCccCCCCCcc----hhhcCCcceehh
Confidence 995 6678999999876432 1122332222 2334332 2233333 357999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhH
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1228 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~e 1228 (1253)
-+||-|.++|++||..+||.+||..+.+.|++.|.+.. +|+.|++||-+|+++.. ||||.||.+|+++....+++
T Consensus 413 IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 413 ILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred hhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceeccccccc
Confidence 99999999999999999999999999999999999875 68999999999999865 99999999999998877765
No 102
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.8e-61 Score=573.37 Aligned_cols=485 Identities=28% Similarity=0.417 Sum_probs=344.1
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++|++++|+++ .+|+|+||++.+|+++||||+||||||||+++|+|...|++|+|..++. -+|+
T Consensus 3 ~i~~~~ls~~~g~~--~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v~ 69 (530)
T COG0488 3 MITLENLSLAYGDR--PLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRVG 69 (530)
T ss_pred eEEEeeeEEeeCCc--eeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceEE
Confidence 48899999999754 4999999999999999999999999999999999999999999998752 2699
Q ss_pred EEeccCccCcc-cHHHHHhcCCCCCC--HHHHHHHHH------------------H-------hCcHHHHhcCCCCcccc
Q 000851 456 LVSQEPALFAT-SIANNILLGKEDAS--MDRVIEAAK------------------A-------ANAHSFVEGLPDGYQTQ 507 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~~~--~~~~~~~~~------------------~-------~~~~~~i~~l~~g~~t~ 507 (1253)
|++|++.+.+. ||.+.+..+..... ..+..++.. . +.+...+..| |+...
T Consensus 70 ~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~~ 147 (530)
T COG0488 70 YLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPDE 147 (530)
T ss_pred EeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCcc
Confidence 99999999865 99999987754221 011111110 0 1222333333 33332
Q ss_pred ccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEe
Q 000851 508 VGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLK 586 (1253)
Q Consensus 508 ~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~ 586 (1253)
...-.+||||||-|++|||||+.+||+|||||||++||.++..++.+.|.+. +| |+|+|||+.+++.+ |++|+-++
T Consensus 148 -~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~-~g-tviiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 148 -DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY-PG-TVIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred -cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC-CC-cEEEEeCCHHHHHHHhhheEEec
Confidence 3344679999999999999999999999999999999999999999999865 35 99999999999988 79999999
Q ss_pred CCEEEEeeCcchhhhcCchHHHHHHhhhcccCCCCCcccCCCCCCCCCCCCCCCCcccchhhhhhhhhhhccccCCCCCc
Q 000851 587 NGQVVESGTHVDLISKGGEYAALVNLQSSEHLSNPSSICYSGSSRYSSFRDFPSSRRYDVEFESSKRRELQSSDQSFAPS 666 (1253)
Q Consensus 587 ~G~i~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (1253)
.|++... .|.|...+....... ..+. ..
T Consensus 225 ~g~l~~y---------~Gny~~~~~~r~~~~-----------------------------~~~~---~~----------- 252 (530)
T COG0488 225 RGKLTPY---------KGNYSSYLEQKAERL-----------------------------RQEA---AA----------- 252 (530)
T ss_pred CCceeEe---------cCCHHHHHHHHHHHH-----------------------------HHHH---HH-----------
Confidence 9977543 233433322110000 0000 00
Q ss_pred chHHHHHHHhhchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCchhHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 667 PSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHY 746 (1253)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 746 (1253)
+. +
T Consensus 253 ------~~--~--------------------------------------------------------------------- 255 (530)
T COG0488 253 ------YE--K--------------------------------------------------------------------- 255 (530)
T ss_pred ------HH--H---------------------------------------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000851 747 FYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSW 826 (1253)
Q Consensus 747 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 826 (1253)
+++ .+...
T Consensus 256 -------------~~~-----------------------------~~~~~------------------------------ 263 (530)
T COG0488 256 -------------QQK-----------------------------ELAKE------------------------------ 263 (530)
T ss_pred -------------HHH-----------------------------HHHHH------------------------------
Confidence 000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHH
Q 000851 827 RLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRG 906 (1253)
Q Consensus 827 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 906 (1253)
..|.+++...-....+...
T Consensus 264 ----------------------------------------------------------~~~i~r~~~~~~~~k~a~s--- 282 (530)
T COG0488 264 ----------------------------------------------------------QEWIRRGKAAASKAKKAKS--- 282 (530)
T ss_pred ----------------------------------------------------------HHHHHHHHhccchHHHHHH---
Confidence 0000000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Q 000851 907 HISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGI-LYR 985 (1253)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~-~~~ 985 (1253)
.....+++... ...
T Consensus 283 -----------------------------------------------------------------r~k~l~k~~~~~~~~ 297 (530)
T COG0488 283 -----------------------------------------------------------------RIKRLEKLEARLAEE 297 (530)
T ss_pred -----------------------------------------------------------------HHHHHHHHHhhhhhc
Confidence 00111111110 000
Q ss_pred cccCCCCCCC--Cccc---ccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC
Q 000851 986 KTAIQPDDPA--SKEV---TEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP 1060 (1253)
Q Consensus 986 ~~~~~~~~~~--~~~~---~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p 1060 (1253)
.+... ..+. ..++ ...+.-++++|++++|+.. +++++++||.|.+|++||||||||+|||||+++|.|-..|
T Consensus 298 ~~~~~-~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~ 374 (530)
T COG0488 298 RPVEE-GKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGP 374 (530)
T ss_pred ccccc-cccceeeccCCcccCCCeeEEEeccccccCCC--ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhccc
Confidence 00000 0000 0000 1123359999999999732 5799999999999999999999999999999999999999
Q ss_pred CccEEEECCccCCCCCHHHHhcceEEEccCC-Ccc-cccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccc
Q 000851 1061 ISGTVLIDGYDIRTLNLRSLRRKIGLVQQEP-ALF-STTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHV 1138 (1253)
Q Consensus 1061 ~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp-~Lf-~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~v 1138 (1253)
.+|+|.+.-. + ++||.+|+. .++ +.|+.|++.-..|+..+.++...|.+.++..- ...++|
T Consensus 375 ~~G~v~~g~~-v----------~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~------~~~~~v 437 (530)
T COG0488 375 LSGTVKVGET-V----------KIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE------DQEKPV 437 (530)
T ss_pred CCceEEeCCc-e----------EEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH------HHhCch
Confidence 9999998542 2 599999998 444 34899999887766667788888877766432 122334
Q ss_pred cCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeC
Q 000851 1139 GDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQ 1217 (1253)
Q Consensus 1139 ge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~ 1217 (1253)
..||||||-|+.||+.++.+|++|||||||++||.+|.+.+.++|.++ .-|||+|||+...+.. |++|+++++
T Consensus 438 ----~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~ 511 (530)
T COG0488 438 ----GVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED 511 (530)
T ss_pred ----hhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC
Confidence 469999999999999999999999999999999999999999999986 3499999999999977 999999999
Q ss_pred CEEEEe-cChhHHhhc
Q 000851 1218 GKVAEI-GSHEQLLRK 1232 (1253)
Q Consensus 1218 G~ive~-Gt~~eLl~~ 1232 (1253)
++.++ |++++..+.
T Consensus 512 -~~~~~~g~y~~y~~~ 526 (530)
T COG0488 512 -KVEEFEGGYEDYLEQ 526 (530)
T ss_pred -ceeEcCCCHHHHHHh
Confidence 88887 888888763
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.5e-53 Score=472.10 Aligned_cols=237 Identities=28% Similarity=0.500 Sum_probs=223.4
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcc
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 1083 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~ 1083 (1253)
|.|+|+||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++ .+|+|++||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 469999999999732 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred eEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000851 1084 IGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 1163 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p 1163 (1253)
|+||||+|.+|++|+++|+++.. ..++++++++++.+++.+++.++|++||+.++++|.+||||||||+||||||+++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998643 35678999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHHHHH
Q 000851 1164 SILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRL 1243 (1253)
Q Consensus 1164 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~~~ 1243 (1253)
+||||||||++||+.+++.+++.|++.++++|+|+||||++++..||||+||++|++++.|+|++|++ ..+.|++++..
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~-~~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLN-EKSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhh-CcHHHHHHHhh
Confidence 99999999999999999999999998888999999999999999999999999999999999999999 56899999865
Q ss_pred h
Q 000851 1244 Q 1244 (1253)
Q Consensus 1244 ~ 1244 (1253)
.
T Consensus 237 ~ 237 (275)
T cd03289 237 S 237 (275)
T ss_pred c
Confidence 4
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-51 Score=418.39 Aligned_cols=215 Identities=32% Similarity=0.542 Sum_probs=187.5
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCC-CCCHHHHhccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK-SLQLKWLREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~-~~~~~~~r~~i 454 (1253)
-|+++||+++|++. .||+|||++|++||+++|+||||||||||+++|.|+-+|++|+|.+||.++. ..+...+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 38999999999853 4999999999999999999999999999999999999999999999998874 33788999999
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCC---CCHHH----HHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 455 GLVSQEPALFAT-SIANNILLGKED---ASMDR----VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~---~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
|+|+|+..||+- |+.||+.++.-. .+.++ -.+.++++++.+-.+.. +.+||||||||+|||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----------P~qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAY-----------PAQLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhC-----------ccccCcHHHHHHHHH
Confidence 999999999965 999999987321 12222 23344455555554444 459999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
|||+.+|+++++|||||||||+....+.+.++++. .|.|.|+|||.+.+.+. ||||+.||+|+|+++|+++++..++
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 99999999999999999999999999999999986 57899999999999988 6999999999999999999998764
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-50 Score=412.05 Aligned_cols=217 Identities=35% Similarity=0.565 Sum_probs=193.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCC-CCCHHHHhcc
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIR-TLNLRSLRRK 1083 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~-~i~~~~lR~~ 1083 (1253)
-|+++||+.+|. +..||+||||+|++||.++|+||||||||||+++|.++.+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 389999999996 456999999999999999999999999999999999999999999999997763 3378899999
Q ss_pred eEEEccCCCccc-ccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1084 IGLVQQEPALFS-TTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~-gTIreNl~~g~~---~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
+|+|+|...||+ -|+.||+.++.- ..+ .+.-.+.|+++++.+.....| .+||||||||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 999999999998 599999988631 122 223445677888888777776 5799999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhcc
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKE 1233 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~ 1233 (1253)
||||.-+|+++|+|||||||||+.-..|.+.++++. +|.|.|+|||.+...++ ||||+.||+|+|+|.|+|+++..++
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999999999976 58999999999999987 9999999999999999999999875
Q ss_pred cc
Q 000851 1234 NG 1235 (1253)
Q Consensus 1234 ~g 1235 (1253)
+.
T Consensus 228 ~~ 229 (240)
T COG1126 228 KS 229 (240)
T ss_pred CC
Confidence 54
No 106
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3e-49 Score=442.59 Aligned_cols=237 Identities=27% Similarity=0.477 Sum_probs=220.6
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
|.|+++|++|+|++...++|+|+||+|++||+++|+|+||||||||+++|.|+++ ++|+|++||.++..++...+|+.|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 4699999999997434459999999999999999999999999999999999997 799999999999999999999999
Q ss_pred EEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000851 455 GLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPK 534 (1253)
Q Consensus 455 ~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ 534 (1253)
+||||+|.+|++|+++|+.... ..++++++++++.+++.+++.++|++++|.++++|.+||||||||++||||++++|+
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~ 158 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAK 158 (275)
T ss_pred EEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999996432 246788999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCchHHHHHHhh
Q 000851 535 ILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQ 613 (1253)
Q Consensus 535 ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~~~~~ 613 (1253)
||||||||++||+.+.+.+++.|++..+++|+|+||||++++..||+|++|++|++++.|++++|++.++.|++++...
T Consensus 159 illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 237 (275)
T cd03289 159 ILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISPS 237 (275)
T ss_pred EEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhhc
Confidence 9999999999999999999999998878899999999999999999999999999999999999999877777777543
No 107
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-49 Score=423.23 Aligned_cols=216 Identities=35% Similarity=0.560 Sum_probs=189.9
Q ss_pred EEEEEEEEECCCC---CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCH---HHH
Q 000851 377 IEFSEVCFAYPSR---PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL---KWL 450 (1253)
Q Consensus 377 i~~~~v~f~y~~~---~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~ 450 (1253)
|++++|++.|+.. ...+|+||||+|++||+.+|||+||+|||||++++.++-.|++|+|.+||+|+..++. ..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999863 1239999999999999999999999999999999999999999999999999987764 456
Q ss_pred hcccEEEeccCccCc-ccHHHHHhcCCCCC--C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 000851 451 REQMGLVSQEPALFA-TSIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 523 (1253)
Q Consensus 451 r~~i~~v~Q~~~lf~-~ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qri 523 (1253)
|++||++||++.|++ .||++|++|..+-+ + .+++.+.++.+++.|...+. +.+|||||||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~y-----------P~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRY-----------PAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccC-----------chhcCcchhhHH
Confidence 789999999999997 69999999975432 2 23455566666665555444 469999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 524 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 524 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
+|||||+.+|+||+.|||||||||+|.+.|.+.|+++. .|-|+++|||.++.++. |||+.||++|+++|+|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999999874 37899999999999988 8999999999999999999988
Q ss_pred hcC
Q 000851 601 SKG 603 (1253)
Q Consensus 601 ~~~ 603 (1253)
.++
T Consensus 231 ~~P 233 (339)
T COG1135 231 ANP 233 (339)
T ss_pred cCc
Confidence 764
No 108
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-49 Score=410.57 Aligned_cols=214 Identities=33% Similarity=0.576 Sum_probs=191.6
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+|+|||+.|.+ ..+++|+||+|++||+++++|||||||||++|+|.|+++|++|+|++||+++++++...||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 789999999974 349999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCccCcc-cHHHHHhcCCCC--CC----HHHHHHHHHHhCcH--HHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 457 VSQEPALFAT-SIANNILLGKED--AS----MDRVIEAAKAANAH--SFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~--~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
|-|..-||+. ||.|||++-..- .+ .+++.+.+++.+++ +|..+.| .+|||||+|||.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHHH
Confidence 9999999965 999999874211 12 24455666666664 3666665 489999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhh-hhcCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTV-RDVDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~-~~~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
||+.+|+|+++|||++||||.++..+|+.+.++.+ ++|+|+|||++++. +-+|||.+|++|+|++.++++++++++
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 99999999999999999999999999999998864 79999999999876 559999999999999999999999874
No 109
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-49 Score=421.04 Aligned_cols=226 Identities=37% Similarity=0.613 Sum_probs=195.8
Q ss_pred EEEEeEEEECCCC--CCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC---HHHH
Q 000851 1006 IELRNVSFKYPVR--PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN---LRSL 1080 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~--~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~---~~~l 1080 (1253)
|+++|||+.|+.. ...++|+||||+|++||+.||+|+||+|||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999852 1246899999999999999999999999999999999999999999999999888776 4567
Q ss_pred hcceEEEccCCCccc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1081 RRKIGLVQQEPALFS-TTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1081 R~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
|++||+|+|++.|++ .|+.+|++|... ..+. +.+.+.|+.+|+.|+..+-| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 889999999999997 799999998642 1223 34556677777766655544 78999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
+|||||..+|+|||.|||||||||+|.+.|.+.|++..+ |-|+++|||.++-+++ |||+.||++|+++|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999998653 8899999999999987 9999999999999999999999
Q ss_pred hcccch-HHHHHH
Q 000851 1231 RKENGI-YKQLIR 1242 (1253)
Q Consensus 1231 ~~~~g~-y~~L~~ 1242 (1253)
.+++.. -++++.
T Consensus 231 ~~Pk~~~t~~fi~ 243 (339)
T COG1135 231 ANPKHAITQEFIG 243 (339)
T ss_pred cCcchHHHHHHHH
Confidence 876543 334443
No 110
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=6.6e-48 Score=435.73 Aligned_cols=198 Identities=30% Similarity=0.429 Sum_probs=166.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
-|.++||+|+|++.+ .++++++|-|.++++||+|||||+|||||++++.|...|+.|.|.-.-.. ++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cc
Confidence 489999999998543 68999999999999999999999999999999999999999988754322 34
Q ss_pred EEEccCC---CcccccHHHHhccCCCC-CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000851 1085 GLVQQEP---ALFSTTIYENIKYGNED-ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 1160 (1253)
Q Consensus 1085 ~~V~Qdp---~Lf~gTIreNl~~g~~~-~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALl 1160 (1253)
++..|.- ..++.|.-|++.+-.++ ...+++...+.+.|+..-.+..| + .+||+|||.||++||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p------~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVP------M----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccc------h----hhcccccchhHHHHHHHh
Confidence 4455543 45678888998876664 66778888999998864433333 3 479999999999999999
Q ss_pred cCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEe-cChh
Q 000851 1161 KNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEI-GSHE 1227 (1253)
Q Consensus 1161 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~-Gt~~ 1227 (1253)
+.|.||||||||++||.+|-..+.++|.++. .+||+|||+...|.. +++|++.+||.+... |...
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~~--Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~ 592 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEFP--GGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIE 592 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhccC--CceeeeechhhHHHHHHHHhHhhccCceeecCccHH
Confidence 9999999999999999999999999998863 489999999999976 999999999998753 4443
No 111
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-48 Score=444.65 Aligned_cols=227 Identities=31% Similarity=0.512 Sum_probs=199.9
Q ss_pred ccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCC-
Q 000851 1000 TEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIR- 1073 (1253)
Q Consensus 1000 ~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~- 1073 (1253)
++..+.|+|+|++++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++.
T Consensus 75 ~~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 75 FNHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 4556789999999999742 3469999999999999999999999999999999999997 57999999999997
Q ss_pred -CCCHHHHhcceEEEccCCCcccccHHHHhccCCC--CCCHHHH-----HHHHHHhcHHHHHHhCCCCccccccCCCCCC
Q 000851 1074 -TLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNE--DASEIEL-----MKATKAANAHGFISRMPEGYQSHVGDRGVQL 1145 (1253)
Q Consensus 1074 -~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~~d~ei-----~~al~~a~l~~~I~~lp~gldt~vge~G~~L 1145 (1253)
.++...+|++++||||+|.+|++|++|||.++.. ..++++. .++++.++ +++++++.++++|.+|
T Consensus 154 ~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~L 226 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNAL 226 (329)
T ss_pred cccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccC
Confidence 4566788999999999999999999999997532 2344444 33444444 3456678899999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEec
Q 000851 1146 SGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1146 SgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1224 (1253)
|||||||+||||||+++|+|||||||||+||+++.+.+++.|++..+++|+|+|||+++++.. ||||+||++|+|+|.|
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g 306 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAG 306 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999998889999999999999987 9999999999999999
Q ss_pred ChhHHhhccc
Q 000851 1225 SHEQLLRKEN 1234 (1253)
Q Consensus 1225 t~~eLl~~~~ 1234 (1253)
+|++++..+.
T Consensus 307 ~~~~l~~~~~ 316 (329)
T PRK14257 307 ETKTIFIHPK 316 (329)
T ss_pred CHHHHhcCCC
Confidence 9999987544
No 112
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-49 Score=395.44 Aligned_cols=219 Identities=30% Similarity=0.491 Sum_probs=197.9
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCC-----cEEEECCeeCCC--CCH
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS-----GKILLDGHDLKS--LQL 447 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-----G~i~~~g~~~~~--~~~ 447 (1253)
..++++|+++.|++ +.+|+|||++|++++++|++|||||||||+++.+.|+.+..+ |+|.++|+||.+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 35899999999984 349999999999999999999999999999999999999875 999999999975 578
Q ss_pred HHHhcccEEEeccCccCcccHHHHHhcCCCCC------CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 448 KWLREQMGLVSQEPALFATSIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 448 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
-.+|++||+|+|.|.-|+.||+||++||..-. -++.++++++.|.+++.+.. .+.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHH
Confidence 99999999999999999999999999984211 23557889999999887754 244667789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++|||||.-+|+|||||||||||||.+..+|.+.+.+++++-|+|+|||.+....+ +|+...+.+|+++|.|+.+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999999999999999998877 5999999999999999998887
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
.+
T Consensus 237 ~~ 238 (253)
T COG1117 237 TN 238 (253)
T ss_pred cC
Confidence 65
No 113
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-48 Score=394.36 Aligned_cols=220 Identities=33% Similarity=0.560 Sum_probs=200.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCc-----cEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPIS-----GTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~-----G~I~idG~di~~--i~~ 1077 (1253)
.++++|+++.|. +..+|+|||+.|++++.+|++|||||||||++++|.|+.+..+ |+|.+||.||.+ ++.
T Consensus 7 ~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 589999999996 4569999999999999999999999999999999999999875 999999999976 578
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC------CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~------~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
-.+|+++|.|+|.|.-|+.||+||+.||.. ..-|+-++++++.|.+||-+.. .+.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHH
Confidence 899999999999999999999999999832 1225668899999999998754 345667889999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
|+||||||.-+|+|||||||||+|||.+...|.+.|.++.++-|+|+|||.+.-..+ +|+...+-.|+++|+|.-+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999989999999999998755 9999999999999999999998
Q ss_pred hccc
Q 000851 1231 RKEN 1234 (1253)
Q Consensus 1231 ~~~~ 1234 (1253)
.++.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 7553
No 114
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-48 Score=399.67 Aligned_cols=221 Identities=35% Similarity=0.577 Sum_probs=196.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+|+|||++|. +..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.++++++.-.||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999996 456999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCccc-ccHHHHhccCC--CCCC----HHHHHHHHHHhcHH--HHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1086 LVQQEPALFS-TTIYENIKYGN--EDAS----EIELMKATKAANAH--GFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1086 ~V~Qdp~Lf~-gTIreNl~~g~--~~~~----d~ei~~al~~a~l~--~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
||-|..-||+ .||.|||..-. ...+ ++.+.+.++.+++. +|..+.| ..|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHH
Confidence 9999999997 59999997631 1223 34455667777774 4666665 67999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhh-hccCEEEEEeCCEEEEecChhHHhhcc
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTI-RNADKIAVLQQGKVAEIGSHEQLLRKE 1233 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti-~~~D~I~Vl~~G~ive~Gt~~eLl~~~ 1233 (1253)
|||..+|+|||||||.+||||.++..+|+-+.+..+ ++|+|+|||++++. +-+|||+||++|+|+.+|+|+++++++
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999988654 89999999999986 559999999999999999999999987
Q ss_pred cchHHHH
Q 000851 1234 NGIYKQL 1240 (1253)
Q Consensus 1234 ~g~y~~L 1240 (1253)
...|-+-
T Consensus 228 an~FV~~ 234 (309)
T COG1125 228 ANDFVED 234 (309)
T ss_pred cHHHHHH
Confidence 6666443
No 115
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-44 Score=389.26 Aligned_cols=465 Identities=20% Similarity=0.240 Sum_probs=358.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 107 VALVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFV 186 (1253)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~ 186 (1253)
+..+.+.+........++.+.+++|.++.++++.-|+..+++ .+++.++.++++|+..|. +-...++.+.+..+.+++
T Consensus 60 lf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier-~~~~rlla~L~~Dvr~IS-f~~s~lp~~~qa~il~l~ 137 (546)
T COG4615 60 LFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER-LGSARLLAGLTSDVRNIS-FAFSRLPELVQAIILTLG 137 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-hcccchhhhhccccccee-ehHhhhHHHHHHHHHHHH
Confidence 334455556666778899999999999999999999999998 699999999999999999 445567889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhHH--HHHHHHHHH
Q 000851 187 GFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEA--KAIESYSHS 264 (1253)
Q Consensus 187 ~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~--~~~~~~~~~ 264 (1253)
+.+.+.++|+++.++..+++.+..+...+...+..+.....++..+++.+..+..++|-|..+....-. ...+.|...
T Consensus 138 s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~ 217 (546)
T COG4615 138 SAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPD 217 (546)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcc
Confidence 999999999999999988888888888888889999999999999999999999999999998875322 223334433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 265 LKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKA 344 (1253)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 344 (1253)
.+++.+..............+.+++.+..+.+++|..... +.-+...+.++.+.++++-.|+.+....++.+.+|.+
T Consensus 218 a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~---~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~Aqv 294 (546)
T COG4615 218 AQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSL---GWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQV 294 (546)
T ss_pred hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHH
Confidence 3333332222222221223334444444444555544222 3333334444445556666789999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHH
Q 000851 345 AAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMV 424 (1253)
Q Consensus 345 a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll 424 (1253)
|++||.++-..++..+ - ..+...|.. ..|+++||.|+|+... .-+..||++|++||++-|+|.|||||||++++|
T Consensus 295 A~~kiakle~~~~~a~-~--~~~q~~p~~-~~lelrnvrfay~~~~-FhvgPiNl~ikrGelvFliG~NGsGKST~~~LL 369 (546)
T COG4615 295 AFNKIAKLELAPYKAD-F--PRPQAFPDW-KTLELRNVRFAYQDNA-FHVGPINLTIKRGELVFLIGGNGSGKSTLAMLL 369 (546)
T ss_pred HHHHHHHhhcCCcccc-C--CCCCcCCcc-cceeeeeeeeccCccc-ceecceeeEEecCcEEEEECCCCCcHHHHHHHH
Confidence 9999998754322211 1 111222232 4699999999997532 357889999999999999999999999999999
Q ss_pred HccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCC-CCHHHHHHHHHHhCcHHHHhcCCCC
Q 000851 425 QRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKED-ASMDRVIEAAKAANAHSFVEGLPDG 503 (1253)
Q Consensus 425 ~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~-~~~~~~~~~~~~~~~~~~i~~l~~g 503 (1253)
.|+|.|++|+|++||.++..-+++++|+-++-|+-|.+||+.++ |.+. ++++.+..-++.-.+..-. ++-+|
T Consensus 370 tGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~kt-sl~d~ 442 (546)
T COG4615 370 TGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAHKT-SLNDG 442 (546)
T ss_pred hcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhhhh-cccCC
Confidence 99999999999999999999999999999999999999998754 4333 5666665555444332222 22222
Q ss_pred ccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhhcCE
Q 000851 504 YQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDT 581 (1253)
Q Consensus 504 ~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~ 581 (1253)
--+ ...||-|||.|+|+--|++-+.||++|||=-+--||.-++.+.+.+.... .|||++.|||+-.....|||
T Consensus 443 ~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADr 517 (546)
T COG4615 443 RFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADR 517 (546)
T ss_pred ccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHH
Confidence 111 24699999999999999999999999999999999999998888776543 59999999999999999999
Q ss_pred EEEEeCCEEEEe
Q 000851 582 IMVLKNGQVVES 593 (1253)
Q Consensus 582 i~vl~~G~i~~~ 593 (1253)
++.|++|+++|.
T Consensus 518 ll~~~~G~~~e~ 529 (546)
T COG4615 518 LLEMRNGQLSEL 529 (546)
T ss_pred HHHHhcCceeec
Confidence 999999999985
No 116
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.5e-46 Score=416.49 Aligned_cols=235 Identities=47% Similarity=0.798 Sum_probs=217.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4789999999632 346999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000851 1086 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 1165 (1253)
Q Consensus 1086 ~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1165 (1253)
|+||++.+|+.|++||+.++.+..+.+++.++++..++.+++..+|.|+++..+..+.+||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999986554556677788888899999999999999999999999999999999999999999999
Q ss_pred EEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHHHH
Q 000851 1166 LLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIR 1242 (1253)
Q Consensus 1166 LlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~~ 1242 (1253)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++++ ..+.|+.+++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~-~~~~~~~~~~ 235 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLA-ENGLYAYLYQ 235 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHh-ccChHHHHHh
Confidence 999999999999999999999999877899999999999998899999999999999999999998 4788888774
No 117
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.9e-46 Score=418.40 Aligned_cols=241 Identities=32% Similarity=0.573 Sum_probs=223.1
Q ss_pred ccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHh
Q 000851 1002 IKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLR 1081 (1253)
Q Consensus 1002 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR 1081 (1253)
..+.|+++|++++|+.. ..++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 45789999999999742 24699999999999999999999999999999999999999999999999999998888999
Q ss_pred cceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000851 1082 RKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 1161 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr 1161 (1253)
++++|++|+|.+|++|++||+.+.. ...+++++++++.+++.+++..+|.|+++.+++.+.+||||||||++|||||++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPEC-KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCC-CCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999998743 234567888899999999999999999999999999999999999999999999
Q ss_pred CCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHHH
Q 000851 1162 NPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLI 1241 (1253)
Q Consensus 1162 ~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~ 1241 (1253)
+|++|||||||++||+.+++.+.+.+++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+..++.|++++
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 99999999999999999999999999987778999999999999988999999999999999999999987678899888
Q ss_pred HHh
Q 000851 1242 RLQ 1244 (1253)
Q Consensus 1242 ~~~ 1244 (1253)
..+
T Consensus 254 ~~~ 256 (257)
T cd03288 254 RTD 256 (257)
T ss_pred hcc
Confidence 644
No 118
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4e-46 Score=413.14 Aligned_cols=235 Identities=50% Similarity=0.834 Sum_probs=217.2
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++++|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..++|+.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997433459999999999999999999999999999999999999999999999999987787788889999
Q ss_pred EeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 000851 457 VSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 536 (1253)
Q Consensus 457 v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~il 536 (1253)
++|++++|+.|+.||+.++.+....+++.++++..++.+++..+|.|+++..+..+.+||||||||++||||++.+|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999999876544566777788888999999999999999999999999999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCchHHHHHH
Q 000851 537 LLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVN 611 (1253)
Q Consensus 537 ilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~~~ 611 (1253)
||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++++++++.+.|+.++.
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHHh
Confidence 999999999999999999999998778999999999999988999999999999999999999988888887654
No 119
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-46 Score=429.52 Aligned_cols=223 Identities=31% Similarity=0.511 Sum_probs=196.1
Q ss_pred CCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCC--CC
Q 000851 374 AGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQ 446 (1253)
Q Consensus 374 ~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 446 (1253)
.+.|+++|++|+|++...++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++.. .+
T Consensus 78 ~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~ 157 (329)
T PRK14257 78 ANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKIS 157 (329)
T ss_pred CceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46799999999997444459999999999999999999999999999999999996 579999999999973 45
Q ss_pred HHHHhcccEEEeccCccCcccHHHHHhcCCCC--CCHHH-----HHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHH
Q 000851 447 LKWLREQMGLVSQEPALFATSIANNILLGKED--ASMDR-----VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 519 (1253)
Q Consensus 447 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~~~~~-----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 519 (1253)
...+|+.++||||+|++|++|++|||.|+... .++++ +.++++.++ +++++++.++++|.+|||||
T Consensus 158 ~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~LSgGq 230 (329)
T PRK14257 158 SLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNALSGGQ 230 (329)
T ss_pred hHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccCCHHH
Confidence 56789999999999999999999999987432 22232 344445544 34456788999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcch
Q 000851 520 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVD 598 (1253)
Q Consensus 520 ~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 598 (1253)
|||++||||++++|+|||||||||+||+++.+.+++.|+++.+++|+|+|||+++++.. ||+|+||++|+|++.|++++
T Consensus 231 kqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~ 310 (329)
T PRK14257 231 QQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKT 310 (329)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999888999999999999987 99999999999999999999
Q ss_pred hhhcC
Q 000851 599 LISKG 603 (1253)
Q Consensus 599 l~~~~ 603 (1253)
+....
T Consensus 311 l~~~~ 315 (329)
T PRK14257 311 IFIHP 315 (329)
T ss_pred HhcCC
Confidence 97653
No 120
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.6e-45 Score=451.46 Aligned_cols=199 Identities=27% Similarity=0.433 Sum_probs=169.0
Q ss_pred CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC--CccEEEECCccCCCCCHHHHhcceEEEccCC-Ccccc
Q 000851 1020 DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP--ISGTVLIDGYDIRTLNLRSLRRKIGLVQQEP-ALFST 1096 (1253)
Q Consensus 1020 ~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p--~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp-~Lf~g 1096 (1253)
.+..|+|||=-++||..+|++|+||||||||+++|.+=-.- .+|+|+|||.+..+ +..++.+|||.|++ |+=.-
T Consensus 803 ~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~~ 879 (1391)
T KOG0065|consen 803 TRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPEL 879 (1391)
T ss_pred ceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCccc
Confidence 34689999999999999999999999999999999987542 47999999999765 78999999999977 46567
Q ss_pred cHHHHhccCC-----CCCCHHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC-CEE
Q 000851 1097 TIYENIKYGN-----EDASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP-SIL 1166 (1253)
Q Consensus 1097 TIreNl~~g~-----~~~~d~e----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p-~IL 1166 (1253)
||||-|.+.. .+.+++| +.++.+..++.++- |..||..|..||..||.|+.||=-|+.|| .||
T Consensus 880 TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~~il 952 (1391)
T KOG0065|consen 880 TVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPSSIL 952 (1391)
T ss_pred chHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCceeE
Confidence 9999998752 2344433 45556555555443 45789989999999999999999999999 999
Q ss_pred EEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhh--hccCEEEEEe-CCEEEEecChhH
Q 000851 1167 LLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTI--RNADKIAVLQ-QGKVAEIGSHEQ 1228 (1253)
Q Consensus 1167 lLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti--~~~D~I~Vl~-~G~ive~Gt~~e 1228 (1253)
+||||||+||+++...|++.+++.. .|+||++.=|.++.. +.+|+++.|+ .|+.|-.|+..+
T Consensus 953 FLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 953 FLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 9999999999999999999999975 699999999999873 7799999997 579999987643
No 121
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.2e-46 Score=383.12 Aligned_cols=220 Identities=30% Similarity=0.539 Sum_probs=191.4
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH---HHh
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLR 451 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r 451 (1253)
..|++++|+|+|+++ .|++|+||+|++||+++|+||||||||||+++|.|+..|++|+|.++|+|+..++.+ .+|
T Consensus 7 ~~I~vr~v~~~fG~~--~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 7 PLIEVRGVTKSFGDR--VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred ceEEEeeeeeecCCE--EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 369999999999754 499999999999999999999999999999999999999999999999999988754 568
Q ss_pred cccEEEeccCccCcc-cHHHHHhcCCCCC---CHHHHH----HHHHHhCcHHH-HhcCCCCccccccCCCCCCChHHHHH
Q 000851 452 EQMGLVSQEPALFAT-SIANNILLGKEDA---SMDRVI----EAAKAANAHSF-VEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 452 ~~i~~v~Q~~~lf~~-ti~~ni~~g~~~~---~~~~~~----~~~~~~~~~~~-i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
+++|+++|+..||+. ||+||+.|...+. +++.+. ..++.+++... .+.+| .+||||++.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 899999999999987 9999999964332 333333 33455555444 33444 6899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchh
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 599 (1253)
+|||||+..||+|+++|||||+|||.+...+.+.|+++++ +.|+|+|||+++++.. ||||+++.||+|+.+|+.+|+
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998865 7899999999999877 699999999999999999999
Q ss_pred hhcCchHH
Q 000851 600 ISKGGEYA 607 (1253)
Q Consensus 600 ~~~~~~y~ 607 (1253)
.+.+..|-
T Consensus 234 ~~sd~P~v 241 (263)
T COG1127 234 LASDDPWV 241 (263)
T ss_pred HhCCCHHH
Confidence 98765543
No 122
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-45 Score=412.87 Aligned_cols=213 Identities=36% Similarity=0.585 Sum_probs=195.0
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++||+++|++.. +|+|+||+|+.||+++|+|||||||||++++|+|+.+|++|+|.+||.++++++++. +.||
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999997533 999999999999999999999999999999999999999999999999999998876 6899
Q ss_pred EEeccCccCcc-cHHHHHhcCCCCC------CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 456 LVSQEPALFAT-SIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
+|+|+..||+. ||+|||+||.... -++++.++++..++.+.+++.|. +||||||||||||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHHH
Confidence 99999999976 9999999986533 25678889999988888888775 899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
|+++|++++||||+|+||++.+..+...|+++.+ +.|+|+|||+..++.. +|||+||++|+|.+.|++.|+..++
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 9999999999999999999999999999988754 6899999999988765 8999999999999999999998764
No 123
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.3e-45 Score=397.33 Aligned_cols=214 Identities=34% Similarity=0.576 Sum_probs=192.3
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.++++|++|+|+++ ++|+|+||++++||+++|+||||||||||+|+|+|+.+|.+|+|++||+++.+++.+++.+++|
T Consensus 2 ~L~~~~ls~~y~~~--~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGGK--PILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECCe--eEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 37899999999853 4999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCc-cCcccHHHHHhcCCCCC----------CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 456 LVSQEPA-LFATSIANNILLGKEDA----------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 456 ~v~Q~~~-lf~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
||||++. -|.-||+|-+.+|+-.. +.+.+.++++..++.++..+. -.+||||||||+.
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-----------~~~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-----------VDELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-----------ccccChhHHHHHH
Confidence 9999975 45669999999996421 123577888888887776543 3479999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhh-hhcCEEEEEeCCEEEEeeCcchhhh
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTV-RDVDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~-~~~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
|||||+++|+||+||||||+||..++-.+++.++++. +|+|+|+|.|+++.. +.||++++|++|+++.+|+++|.+.
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999986 479999999999875 5699999999999999999999886
Q ss_pred c
Q 000851 602 K 602 (1253)
Q Consensus 602 ~ 602 (1253)
.
T Consensus 229 ~ 229 (258)
T COG1120 229 E 229 (258)
T ss_pred H
Confidence 5
No 124
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-45 Score=404.99 Aligned_cols=234 Identities=56% Similarity=0.890 Sum_probs=217.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999963 245999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000851 1086 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 1165 (1253)
Q Consensus 1086 ~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1165 (1253)
|++|++.+|++|++||+.++....+++++.++++.+++.+++..+|.|+++.+..+..+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655667778888899999999999999999999999999999999999999999999999
Q ss_pred EEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHHHH
Q 000851 1166 LLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIR 1242 (1253)
Q Consensus 1166 LlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~~ 1242 (1253)
|||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||++++|++|++++.|+++++.+ ..+.|+.++.
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~-~~~~~~~~~~ 234 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA-KGGLYAEMWK 234 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh-cccHHHHHHh
Confidence 999999999999999999999998766889999999999998899999999999999999999987 4677777664
No 125
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=8.9e-46 Score=367.38 Aligned_cols=208 Identities=34% Similarity=0.582 Sum_probs=188.1
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCC---HHHHhcc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ---LKWLREQ 453 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r~~ 453 (1253)
|+|+||+++|++. .++|+||||+|++||++-|+||||||||||+|+|.+...|+.|+|.++|+|+..+. ...+|++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7899999999876 56999999999999999999999999999999999999999999999999997665 5569999
Q ss_pred cEEEeccCccCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 454 MGLVSQEPALFAT-SIANNILLGKED------ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 454 i~~v~Q~~~lf~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
||+|+||..|... |+.||++|...- .-.+++.++++.+++.+-...+|. +||||||||+|||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHHH
Confidence 9999999988755 999999996431 124678889999999988888886 8999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhhc-CEEEEEeCCEEEEeeCc
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRDV-DTIMVLKNGQVVESGTH 596 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~-d~i~vl~~G~i~~~g~~ 596 (1253)
||++.+|++||-||||.+|||++...|++.+.++. .|.||++.||+.+.+... -|++.+++|+++....+
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 99999999999999999999999999999999984 589999999999999886 78999999999876543
No 126
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.4e-45 Score=362.25 Aligned_cols=211 Identities=33% Similarity=0.564 Sum_probs=189.6
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|.+++|.|+|...+ =..+++|++||++||+||||||||||+++|+||..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~~~----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGHLP----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCcce----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 56789999997543 257899999999999999999999999999999999999999999999876664 356999
Q ss_pred EeccCccCcc-cHHHHHhcCCCCC------CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALFAT-SIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
++||..||.- ||++||.+|.... ..+++..++..+++..|.++||. +||||||||+||||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 9999999966 9999999996421 35678899999999999999996 8999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcCc
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKGG 604 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 604 (1253)
+++-|||+||||+|+|||.-+..+...+.++. ++.|+++|||.++.++. +|+++++++|||.++|+.+++.+..+
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~ 222 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKA 222 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCC
Confidence 99999999999999999999999999998875 46899999999999876 89999999999999999999887543
No 127
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-45 Score=403.92 Aligned_cols=233 Identities=56% Similarity=0.923 Sum_probs=214.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+++ +.++++|+||++++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999743 236999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000851 1086 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 1165 (1253)
Q Consensus 1086 ~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1165 (1253)
|+||++.+|+.|++||+.++....+.+++.+.++..++.++++.+|.|+++.++.....||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655556677778888899999999999999999999999999999999999999999999
Q ss_pred EEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHH
Q 000851 1166 LLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQL 1240 (1253)
Q Consensus 1166 LlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L 1240 (1253)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+ ..+.|+.+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~-~~~~~~~~ 233 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLA-QGGVYAKL 233 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHH-cCcchhhh
Confidence 999999999999999999999999878899999999999998899999999999999999999987 45555543
No 128
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=6.1e-45 Score=403.96 Aligned_cols=235 Identities=63% Similarity=1.016 Sum_probs=214.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+...+.++|+|+||++++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997433356999999999999999999999999999999999999999999999999998888778888999
Q ss_pred EEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000851 1086 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 1165 (1253)
Q Consensus 1086 ~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1165 (1253)
|++|++.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++.++....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987555556677778888899999999999999999999999999999999999999999999
Q ss_pred EEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHHH
Q 000851 1166 LLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLI 1241 (1253)
Q Consensus 1166 LlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~ 1241 (1253)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+ ..+.++.++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~-~~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA-QKGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh-cChhHHHHh
Confidence 999999999999999999999998777899999999999998899999999999999999999987 455555554
No 129
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-45 Score=400.74 Aligned_cols=226 Identities=52% Similarity=0.891 Sum_probs=211.4
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcc
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 1083 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~ 1083 (1253)
+.|+++|++++|+. ..++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 35899999999963 2359999999999999999999999999999999999999999999999999988888889999
Q ss_pred eEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000851 1084 IGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 1163 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p 1163 (1253)
++|+||++.+|++|++||+.++.+....+++.++++..++.++++.+|.|+++.++....+||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876555667788888999999999999999999999999999999999999999999999
Q ss_pred CEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhh
Q 000851 1164 SILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1164 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|+++++++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999877899999999999998899999999999999999988876
No 130
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-45 Score=401.87 Aligned_cols=232 Identities=54% Similarity=0.902 Sum_probs=213.9
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++++|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|+.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999997542359999999999999999999999999999999999999999999999999987777788889999
Q ss_pred EeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 000851 457 VSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 536 (1253)
Q Consensus 457 v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~il 536 (1253)
++|++.+|+.|++||+.++.+....+++.+.++..++.++++.+|.|+++..+..+.+||||||||++|||||+.+|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999986655566777788888999999999999999999999999999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCchHHH
Q 000851 537 LLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAA 608 (1253)
Q Consensus 537 ilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~ 608 (1253)
||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++....+.|+.
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 232 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVYAK 232 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcchhh
Confidence 999999999999999999999998888999999999999988999999999999999999998877666554
No 131
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.2e-44 Score=405.24 Aligned_cols=239 Identities=34% Similarity=0.587 Sum_probs=218.0
Q ss_pred CCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHh
Q 000851 372 KLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLR 451 (1253)
Q Consensus 372 ~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 451 (1253)
...+.|+++|++++|++....+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.+...+|
T Consensus 15 ~~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 15 GLGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred cCCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 34578999999999975333599999999999999999999999999999999999999999999999999888888889
Q ss_pred cccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000851 452 EQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 531 (1253)
Q Consensus 452 ~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~ 531 (1253)
+.|+||+|++.+|++|++||+..... ...+++.++.+..++.+++..+|.|+++.+++.+.+||||||||++||||+++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999976432 24556778888889999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc-CchHHHHH
Q 000851 532 NPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK-GGEYAALV 610 (1253)
Q Consensus 532 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~y~~~~ 610 (1253)
+|++|||||||++||+++++.+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+.|++++
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 99999999999999999999999999988778999999999999988999999999999999999999876 45677766
Q ss_pred H
Q 000851 611 N 611 (1253)
Q Consensus 611 ~ 611 (1253)
.
T Consensus 254 ~ 254 (257)
T cd03288 254 R 254 (257)
T ss_pred h
Confidence 4
No 132
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.5e-45 Score=398.27 Aligned_cols=221 Identities=37% Similarity=0.641 Sum_probs=206.9
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcc
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 1083 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~ 1083 (1253)
|.|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 458999999999732 2469999999999999999999999999999999999999999999999999998888889999
Q ss_pred eEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000851 1084 IGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 1163 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p 1163 (1253)
++|+||+|.+|++|++||+.+.. ..+.+++.++++..++.+++.++|.|+++.+++.+.+||||||||++|||||+++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFG-EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCC-CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998754 34677889999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecCh
Q 000851 1164 SILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSH 1226 (1253)
Q Consensus 1164 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~ 1226 (1253)
++|||||||++||+.+++.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 999999999999999999999999998778999999999999988999999999999998863
No 133
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.4e-45 Score=408.10 Aligned_cols=211 Identities=27% Similarity=0.375 Sum_probs=169.1
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcc
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 1083 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~ 1083 (1253)
..+++.+|+|.|+..+ .+.++++++.++.-+++++||++|+||||+++++.+-..|..|.+-+.+ |.+
T Consensus 361 p~l~i~~V~f~y~p~~-y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSE-YQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CeeEEEeeeccCCCcc-hhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 3699999999997432 2799999999999999999999999999999999999999999988865 678
Q ss_pred eEEEccCCCcc-cccHH--HHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000851 1084 IGLVQQEPALF-STTIY--ENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 1160 (1253)
Q Consensus 1084 i~~V~Qdp~Lf-~gTIr--eNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALl 1160 (1253)
|+|-.|.-+=| +-.+. |-+.-..|..+++|+...|...|+..-+..-+ -..||||||=|+++|-+..
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s----------i~~LSGGQKsrvafA~~~~ 498 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS----------IASLSGGQKSRVAFAACTW 498 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc----------ccccCCcchhHHHHHHHhc
Confidence 99999987633 22211 11111124458899999988887755443221 2469999999999999999
Q ss_pred cCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhcccchHHH
Q 000851 1161 KNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKENGIYKQ 1239 (1253)
Q Consensus 1161 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~ 1239 (1253)
.+|.+|+|||||.+||.++-..+-++|+++. --||+|||+.+.+.. |+.++|.++|+|... +.....|++
T Consensus 499 ~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F~--GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~i-------eg~~~~yKk 569 (582)
T KOG0062|consen 499 NNPHLLVLDEPTNHLDRDSLGALAKALKNFN--GGVVLVSHDEEFISSLCKELWVVEDGKVTPI-------EGGIDKYKK 569 (582)
T ss_pred CCCcEEEecCCCccccHHHHHHHHHHHHhcC--CcEEEEECcHHHHhhcCceeEEEcCCcEEee-------eccHHHHHH
Confidence 9999999999999999999999999999863 369999999999977 999999999999862 111124667
Q ss_pred HHHHhh
Q 000851 1240 LIRLQQ 1245 (1253)
Q Consensus 1240 L~~~~~ 1245 (1253)
+...+.
T Consensus 570 l~~~e~ 575 (582)
T KOG0062|consen 570 LLGAEL 575 (582)
T ss_pred HHHHHH
Confidence 766554
No 134
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-45 Score=414.76 Aligned_cols=214 Identities=32% Similarity=0.556 Sum_probs=193.0
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
..|+++||+++|++ ..+++|+||+|++||+++|+|||||||||++++|+||.+|++|+|.+||+++.++++. ++.|
T Consensus 4 ~~l~i~~v~k~yg~--~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFGD--FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecCC--eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 35999999999983 4599999999999999999999999999999999999999999999999999998876 4789
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCC---CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 455 GLVSQEPALFAT-SIANNILLGKED---AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~---~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
|+|+|+..||+- ||+|||+||... .. .+++.++++..++.++-.+.| .+||||||||+|||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHHH
Confidence 999999999965 999999999751 11 247788888888888777766 48999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhh-hhcCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTV-RDVDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~-~~~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
|||..+|++||||||.||||.+-+..++..++++. .|.|.|+|||+-++. ..+|||+||++|+|.+.|+++|+..++
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999999998874 378999999999876 458999999999999999999998764
No 135
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-45 Score=384.45 Aligned_cols=198 Identities=37% Similarity=0.580 Sum_probs=174.3
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.+++++|+++|++ ..||+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.++..- ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 4789999999985 4499999999999999999999999999999999999999999999999987432 35799
Q ss_pred EEeccCccCc-ccHHHHHhcCCCCC------CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 456 LVSQEPALFA-TSIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 456 ~v~Q~~~lf~-~ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
||+|++.||+ .||+||+.+|.+.. ..+.+.+..+.+++.+|-++.|. +||||||||+|||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHH
Confidence 9999999997 59999999986542 23456677777777777777664 899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeC--CEEE
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKN--GQVV 591 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~--G~i~ 591 (1253)
|+.+|+||+||||++|||+.|...+++.+.++.+ ++|+++|||++++.-. +|||+||.+ |+|.
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 9999999999999999999999999999998853 6899999999998655 899999998 5554
No 136
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.3e-44 Score=382.06 Aligned_cols=206 Identities=35% Similarity=0.537 Sum_probs=173.3
Q ss_pred EEEEEEEEECCCCCC--cccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH---H-
Q 000851 377 IEFSEVCFAYPSRPH--MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW---L- 450 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~--~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~- 450 (1253)
++++||++.|..... .+|+++||+|++||++||+||||||||||+++|.|+..|++|.|.++|+|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 578999999975432 3999999999999999999999999999999999999999999999999999887433 3
Q ss_pred hcccEEEeccCccCcc-cHHHHHhcC----CCCC--CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 000851 451 REQMGLVSQEPALFAT-SIANNILLG----KEDA--SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 523 (1253)
Q Consensus 451 r~~i~~v~Q~~~lf~~-ti~~ni~~g----~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qri 523 (1253)
|++||||+|+..|.+. |++|||.+. .... ..+...+.++..++.+... ...+.+|||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 4579999999999876 999999853 2111 1233444444444443333 134568999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000851 524 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVE 592 (1253)
Q Consensus 524 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~ 592 (1253)
||||||+.+|+|++.||||++||+++.+.|.+.+.++. .|+|+|+|||+......|||++.|+||++.+
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999984 3789999999999999999999999999543
No 137
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-45 Score=379.10 Aligned_cols=227 Identities=33% Similarity=0.533 Sum_probs=190.6
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCC-CHHHHhc
Q 000851 1005 NIELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL-NLRSLRR 1082 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i-~~~~lR~ 1082 (1253)
.++++|+++.|+.+. -.++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.+.... +....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999998432 12599999999999999999999999999999999999999999999999876554 3447889
Q ss_pred ceEEEccCCC--ccc-ccHHHHhc----cCCCCCCHHHHHHHHHHhcHH-HHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000851 1083 KIGLVQQEPA--LFS-TTIYENIK----YGNEDASEIELMKATKAANAH-GFISRMPEGYQSHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1083 ~i~~V~Qdp~--Lf~-gTIreNl~----~g~~~~~d~ei~~al~~a~l~-~~I~~lp~gldt~vge~G~~LSgGQkQrla 1154 (1253)
.+.+|+|||. |=+ -||++-|. ...-+....+++++++.+++. +|..+.| .+||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 9999999996 222 36665553 211123345688999999884 4555555 579999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCC--ceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLMEG--RTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~--~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||||.-+|++||||||||+||...++.|++.+.+..++ -|.|+|||++..+.. ||||+||++|+++|.++-+++.+
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999999999998764 499999999999987 99999999999999999999998
Q ss_pred cccchHHHHHH
Q 000851 1232 KENGIYKQLIR 1242 (1253)
Q Consensus 1232 ~~~g~y~~L~~ 1242 (1253)
.....|.+...
T Consensus 232 ~~~h~ytr~Ll 242 (252)
T COG1124 232 HPSHPYTRELL 242 (252)
T ss_pred CCccHHHHHHH
Confidence 65566665543
No 138
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.9e-45 Score=418.69 Aligned_cols=226 Identities=35% Similarity=0.540 Sum_probs=193.0
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---Hh
Q 000851 1006 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS---LR 1081 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~---lR 1081 (1253)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996321 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cceEEEccCCCccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000851 1082 RKIGLVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrla 1154 (1253)
++|+||||++.+|+ .|++||+.++.. ..+ .+++.++++.+++.++..+. ..+||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~-----------~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSY-----------PSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHH
Confidence 89999999999996 799999987531 122 23456667777766554433 3679999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||||+.+|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+++|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999999753 7899999999999966 99999999999999999999987
Q ss_pred cccchH-HHHHH
Q 000851 1232 KENGIY-KQLIR 1242 (1253)
Q Consensus 1232 ~~~g~y-~~L~~ 1242 (1253)
.+...+ ++++.
T Consensus 231 ~p~~~~~~~~~~ 242 (343)
T TIGR02314 231 HPKTPLAQKFIR 242 (343)
T ss_pred CCCcHHHHHHHh
Confidence 544433 44443
No 139
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-44 Score=399.23 Aligned_cols=233 Identities=53% Similarity=0.850 Sum_probs=214.9
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
++++|++++|++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999632 349999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 000851 457 VSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 536 (1253)
Q Consensus 457 v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~il 536 (1253)
++|++.+|+.|++||+.++.+..+.+++.++++..++.+.+..+|.|+++.+..++.+||||||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999987666666777888888999999999999999999999999999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCchHHHHH
Q 000851 537 LLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALV 610 (1253)
Q Consensus 537 ilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~~ 610 (1253)
||||||++||+++...+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++....+.|+.++
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~ 233 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEMW 233 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHHHH
Confidence 99999999999999999999998877889999999999998899999999999999999988887766666554
No 140
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=4.9e-45 Score=392.92 Aligned_cols=221 Identities=36% Similarity=0.558 Sum_probs=196.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.++++|++|+|+ ++++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.++.+++.+++-+++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 378999999997 45799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCC-cccccHHHHhccCCCC----------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1085 GLVQQEPA-LFSTTIYENIKYGNED----------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1085 ~~V~Qdp~-Lf~gTIreNl~~g~~~----------~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
+||||++. -|.-|++|=+.+|+-. .+.+.+.+|++..++.++..+. + ..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-------~----~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-------V----DELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-------c----cccChhHHHHH
Confidence 99999964 5677999999888421 1223578899999999887552 2 46999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhh-hccCEEEEEeCCEEEEecChhHHh
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTI-RNADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
.|||||..+|+||+||||||+||...+-.|++.+++.. +|+|+|+|.|+++.. +.||++++|++|+++.+|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999976 379999999999886 559999999999999999999998
Q ss_pred hcccchHHHHH
Q 000851 1231 RKENGIYKQLI 1241 (1253)
Q Consensus 1231 ~~~~g~y~~L~ 1241 (1253)
.. ...++.|
T Consensus 228 T~--e~l~~Vy 236 (258)
T COG1120 228 TE--ENLREVY 236 (258)
T ss_pred CH--HHHHHHh
Confidence 63 3344444
No 141
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-44 Score=397.53 Aligned_cols=227 Identities=50% Similarity=0.879 Sum_probs=210.5
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
+.|+++|++|+|++. ..+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|+.+
T Consensus 1 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 368999999999742 2499999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000851 455 GLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPK 534 (1253)
Q Consensus 455 ~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ 534 (1253)
+|++|++.+|+.|++||+.++.+....+++.++++..++.++++.+|.|+++.++....+||||||||++|||||+.+|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999876656677888888889999999999999999999999999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 535 ILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 535 ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
+|||||||++||+.+.+.+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++..+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999998778999999999999988999999999999999988777654
No 142
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.7e-45 Score=406.75 Aligned_cols=219 Identities=35% Similarity=0.606 Sum_probs=198.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|.+. .+++|+||+|+.||.++|+|||||||||++++|+|+.+|++|+|.|||.+++++++++ +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999732 2899999999999999999999999999999999999999999999999999998876 799
Q ss_pred EEEccCCCcccc-cHHHHhccCCCC------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFST-TIYENIKYGNED------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~~~------~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
++|+|+..||+. ||+|||.|+... ..++++.++++..++.+.+++.| .+||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999986 999999998532 23567889999999999888877 679999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHHhhccc
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLRKEN 1234 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eLl~~~~ 1234 (1253)
||+++|+++|||||.|+||+..+..+...|+++.+ +.|+|.|||+..+.. -+|||+||++|+|.+.|+|.|+..++.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999999998653 689999999988765 599999999999999999999998776
Q ss_pred chHHH
Q 000851 1235 GIYKQ 1239 (1253)
Q Consensus 1235 g~y~~ 1239 (1253)
..|-.
T Consensus 227 n~fVA 231 (338)
T COG3839 227 NLFVA 231 (338)
T ss_pred chhhh
Confidence 65543
No 143
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-44 Score=374.28 Aligned_cols=226 Identities=38% Similarity=0.609 Sum_probs=196.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH---HHh
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLR 1081 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~---~lR 1081 (1253)
.|++++|+++|. ++.|++||||+|++||.+||+|+||||||||++++.|+..|++|+|+++|.|+.+++.+ .+|
T Consensus 8 ~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 599999999996 45699999999999999999999999999999999999999999999999999999864 579
Q ss_pred cceEEEccCCCcccc-cHHHHhccCCC---CCCHHHHH----HHHHHhcHHHH-HHhCCCCccccccCCCCCCChhHHHH
Q 000851 1082 RKIGLVQQEPALFST-TIYENIKYGNE---DASEIELM----KATKAANAHGF-ISRMPEGYQSHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~g-TIreNl~~g~~---~~~d~ei~----~al~~a~l~~~-I~~lp~gldt~vge~G~~LSgGQkQr 1152 (1253)
+++|+++|+..||+. ||+||+.+... ..+++++. ..++.+|+..- .+.+| ..||||.+.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 999999999999975 99999998532 23344333 33455555544 33334 6899999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
+|||||+.-+|+||++|||||+|||.+...+-+.|+++.+ +.|+|+|||+++++.. ||||+++.+|+|+..|+++||
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998764 8899999999999976 899999999999999999999
Q ss_pred hhcccchHHHHHHHh
Q 000851 1230 LRKENGIYKQLIRLQ 1244 (1253)
Q Consensus 1230 l~~~~g~y~~L~~~~ 1244 (1253)
.+..+...++.++..
T Consensus 234 ~~sd~P~v~qf~~G~ 248 (263)
T COG1127 234 LASDDPWVRQFFNGI 248 (263)
T ss_pred HhCCCHHHHHHhcCC
Confidence 997666777766543
No 144
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-44 Score=376.69 Aligned_cols=222 Identities=34% Similarity=0.532 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCCC--cccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCC-CHHHHhc
Q 000851 376 QIEFSEVCFAYPSRPH--MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL-QLKWLRE 452 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~--~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~-~~~~~r~ 452 (1253)
-++++|+++.|+.+.. ++|+||||+|.+||+++|||+||||||||.++|+|+.+|++|+|.++|.++... ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 4789999999985431 399999999999999999999999999999999999999999999999877543 3446788
Q ss_pred ccEEEeccCc--cCc-ccHHHHHhcCCC----CCCHHHHHHHHHHhCcH-HHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 453 QMGLVSQEPA--LFA-TSIANNILLGKE----DASMDRVIEAAKAANAH-SFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 453 ~i~~v~Q~~~--lf~-~ti~~ni~~g~~----~~~~~~~~~~~~~~~~~-~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
.|-+|||||. |-+ -||++-|.-+.. +...+++.++++.+++. +|..+.| .+||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 8999999995 332 277777653321 12345677888888775 3555555 489999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCC--CeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSN--RTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~--~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
|||||.-+|++||||||||+||+..+..|++.|.+++++ -|.|+|||+++.+.+ ||||+||++|+++|.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999999999998765 499999999999987 89999999999999999999887
Q ss_pred c-CchHHH
Q 000851 602 K-GGEYAA 608 (1253)
Q Consensus 602 ~-~~~y~~ 608 (1253)
. ...|.+
T Consensus 232 ~~~h~ytr 239 (252)
T COG1124 232 HPSHPYTR 239 (252)
T ss_pred CCccHHHH
Confidence 6 344544
No 145
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.1e-44 Score=392.09 Aligned_cols=220 Identities=40% Similarity=0.653 Sum_probs=205.3
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
|.++++|++++|++....+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.+
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 46899999999975434599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000851 455 GLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPK 534 (1253)
Q Consensus 455 ~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ 534 (1253)
+|++|++.+|+.|++||+.+... ...+++.++++..++.+++.++|.|+++..++.+.+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~ 159 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSK 159 (221)
T ss_pred EEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999987543 45678888899999999999999999999999999999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeC
Q 000851 535 ILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGT 595 (1253)
Q Consensus 535 ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 595 (1253)
++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 160 ILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 9999999999999999999999999877899999999999998899999999999998875
No 146
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=5.4e-44 Score=396.41 Aligned_cols=234 Identities=64% Similarity=0.989 Sum_probs=211.9
Q ss_pred EEEEEEEEECCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 377 IEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 377 i~~~~v~f~y~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
++++|+++.|++.. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997532 34999999999999999999999999999999999999999999999999988777777788899
Q ss_pred EEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000851 456 LVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKI 535 (1253)
Q Consensus 456 ~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~i 535 (1253)
|++|++.+|+.|++||+.++.+....+++.+.++..++.+++..+|.|+++..+....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999998665555667777777888999999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCchHHHHH
Q 000851 536 LLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALV 610 (1253)
Q Consensus 536 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~y~~~~ 610 (1253)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++......++.++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcChhHHHHh
Confidence 999999999999999999999998877899999999999998899999999999999999888877655555443
No 147
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-44 Score=390.34 Aligned_cols=215 Identities=35% Similarity=0.643 Sum_probs=194.4
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCC-CCCHHHHhccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK-SLQLKWLREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~-~~~~~~~r~~i 454 (1253)
-++++|++|+|+++ ..+|+|+||+|++||.++|+||||||||||++++.|++.|++|+|.++|.++. ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 47899999999876 46999999999999999999999999999999999999999999999999988 47888999999
Q ss_pred EEEeccC--ccCcccHHHHHhcCCCCC--CH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 455 GLVSQEP--ALFATSIANNILLGKEDA--SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 455 ~~v~Q~~--~lf~~ti~~ni~~g~~~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
|||+|+| ++|..||.|.++||.++. +. +++.++++.+++.++.++.| .+||||||||+|||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 899999999999997653 33 34667777777777655544 58999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
.+|+.+|++||||||||+||+...+.+.+.++++.+ ++|+|++||+++.+.. ||++++|++|+++.+|+++++.+.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 999999999999999999999999999999999864 4799999999999977 999999999999999998887664
No 148
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-44 Score=370.99 Aligned_cols=214 Identities=35% Similarity=0.586 Sum_probs=186.8
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCC---HHHHhc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ---LKWLRE 452 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r~ 452 (1253)
.|+++||+..||++ +.+|+||||+|++||++||+||||||||||++.|.|+.+|++|+|.++|.++...+ .+.+|+
T Consensus 3 ~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 48999999999853 45999999999999999999999999999999999999999999999999998776 556788
Q ss_pred ccEEEeccCccCcc-cHHHHHhcCCCCC-----------CHH---HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCCh
Q 000851 453 QMGLVSQEPALFAT-SIANNILLGKEDA-----------SMD---RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSG 517 (1253)
Q Consensus 453 ~i~~v~Q~~~lf~~-ti~~ni~~g~~~~-----------~~~---~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSg 517 (1253)
+|||++|++.|.+. |+.+|+..|+-.. +.+ ...++++..++.+.. -.+..+|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A-----------~qra~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKA-----------YQRASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHH-----------HHHhccCCc
Confidence 99999999999976 9999999886432 222 334455555554433 345568999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEee
Q 000851 518 GQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 594 (1253)
Q Consensus 518 Gq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 594 (1253)
||+|||+|||||+++|+|+|-|||+|+|||.+.+.+++.|+++. .|.|+|+.-|.++.+++ ||||+-|++|+|+..|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999999874 57999999999999875 8999999999999999
Q ss_pred Ccchhhh
Q 000851 595 THVDLIS 601 (1253)
Q Consensus 595 ~~~~l~~ 601 (1253)
+.+|+-.
T Consensus 231 ~~~el~~ 237 (258)
T COG3638 231 PASELTD 237 (258)
T ss_pred ChhhhhH
Confidence 9999643
No 149
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=8e-44 Score=390.27 Aligned_cols=220 Identities=44% Similarity=0.761 Sum_probs=202.7
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcc
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 1083 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~ 1083 (1253)
+.|+++|++++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999632 2469999999999999999999999999999999999999999999999999988887778899
Q ss_pred eEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000851 1084 IGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 1163 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p 1163 (1253)
++|++|++.+|..|++||+.++.+..+.+++.++++..++.+.+...|.|++|.+.+...+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998865444566778889999999999999999999999888999999999999999999999
Q ss_pred CEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEec
Q 000851 1164 SILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1164 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G 1224 (1253)
++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.++.||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999987668999999999988779999999999998765
No 150
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.2e-44 Score=359.46 Aligned_cols=208 Identities=32% Similarity=0.500 Sum_probs=188.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH---HHhc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLRR 1082 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~---~lR~ 1082 (1253)
|+|+||+.+|+.. +++|+||||+|++||.+-++|||||||||++++|.+...|++|+|.++|.|++++... -+|+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7999999999854 5799999999999999999999999999999999999999999999999999988644 6899
Q ss_pred ceEEEccCCCccc-ccHHHHhccCCC------CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1083 KIGLVQQEPALFS-TTIYENIKYGNE------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1083 ~i~~V~Qdp~Lf~-gTIreNl~~g~~------~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
+||+|+||-.|.. -|+.||+++... ..-.+++.++++.+|+.+-...+| .+|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 9999999998775 699999998632 122457889999999999999998 5799999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecCh
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSH 1226 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~ 1226 (1253)
|||++.+|++||-||||-+|||++...|++.+.+.. .|.||++.||+.+.+.. --|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999999875 59999999999999977 568999999999976554
No 151
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-44 Score=387.92 Aligned_cols=215 Identities=39% Similarity=0.649 Sum_probs=195.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCC-CCCHHHHhcc
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIR-TLNLRSLRRK 1083 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~-~i~~~~lR~~ 1083 (1253)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.+++ ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999854 57999999999999999999999999999999999999999999999999998 4788999999
Q ss_pred eEEEccCC--CcccccHHHHhccCCCC--CCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1084 IGLVQQEP--ALFSTTIYENIKYGNED--ASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1084 i~~V~Qdp--~Lf~gTIreNl~~g~~~--~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
+|+|+|+| .+|..||.|.++||... .+. +.+.++++.+++.++.++.| .+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHh
Confidence 99999999 69999999999998532 333 34667888888877754444 6899999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
|.+|..+|++||||||||+||+...+.+.+.++++.+ ++|+|+|||+++.+.. |||++||++|+++.+|+|++++++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999864 4799999999999977 999999999999999999999874
No 152
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4.3e-44 Score=411.50 Aligned_cols=215 Identities=34% Similarity=0.532 Sum_probs=186.2
Q ss_pred EEEEEEEEECCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH---Hh
Q 000851 377 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW---LR 451 (1253)
Q Consensus 377 i~~~~v~f~y~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 451 (1253)
|+++||+++|++.. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++..++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 34999999999999999999999999999999999999999999999999998876544 57
Q ss_pred cccEEEeccCccCc-ccHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 452 EQMGLVSQEPALFA-TSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 452 ~~i~~v~Q~~~lf~-~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
++||||+|++.+|. .|++||+.++... .+. +++.++++..++.+..+ ..+.+||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~-----------~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHD-----------SYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 89999999999996 6999999986421 122 33455555555544433 445689999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
|||||+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999999854 7899999999999966 89999999999999999999976
Q ss_pred c
Q 000851 602 K 602 (1253)
Q Consensus 602 ~ 602 (1253)
.
T Consensus 231 ~ 231 (343)
T TIGR02314 231 H 231 (343)
T ss_pred C
Confidence 5
No 153
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-44 Score=381.48 Aligned_cols=217 Identities=31% Similarity=0.532 Sum_probs=189.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++|++|+|.++ +||+||||+|++|+.+||+||||||||||+|+++|+.+|++|+|.++|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 49999999999732 59999999999999999999999999999999999999999999999998876433 5789
Q ss_pred EEEccCCC---cccccHHHHhccCCCC----------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1085 GLVQQEPA---LFSTTIYENIKYGNED----------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1085 ~~V~Qdp~---Lf~gTIreNl~~g~~~----------~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
|||||... -|+-||+|=+.+|... .+.+++.+|++.+++.++..+ ++| .|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i~----~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QIG----ELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------ccc----ccCcHHHH
Confidence 99999653 5889999999887321 234789999999999988644 455 49999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC-CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME-GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
|+.|||||+.+|++|+|||||+++|+.++..+.+.|+++.+ ||||++|+|+++.+.. ||+|+.| |++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhc
Confidence 99999999999999999999999999999999999999864 8999999999999865 9999999 6688899999999
Q ss_pred hhcccchHHHHH
Q 000851 1230 LRKENGIYKQLI 1241 (1253)
Q Consensus 1230 l~~~~g~y~~L~ 1241 (1253)
+.. ..+.+.+
T Consensus 226 ~~~--~~l~~~~ 235 (254)
T COG1121 226 LTE--ENLEKAF 235 (254)
T ss_pred cCH--HHHHHHh
Confidence 863 3444444
No 154
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.7e-43 Score=387.70 Aligned_cols=220 Identities=42% Similarity=0.731 Sum_probs=202.0
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
++|+++|++++|++....+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 35899999999975334599999999999999999999999999999999999999999999999998877777778899
Q ss_pred EEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000851 455 GLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPK 534 (1253)
Q Consensus 455 ~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ 534 (1253)
+|++|++.+|..|++||+.++.+....+++.+.++..++.+.+..+|.|++|.+.....+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998899999998765555667778888889999999999999999999999999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEee
Q 000851 535 ILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 594 (1253)
Q Consensus 535 ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 594 (1253)
+|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999987668999999999988779999999999998754
No 155
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5.2e-44 Score=351.29 Aligned_cols=210 Identities=36% Similarity=0.582 Sum_probs=189.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|.+++|.|+|...+ -.++++|++||+|||+||||||||||++++.||..|.+|+|.|||+|...-++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56889999997432 468999999999999999999999999999999999999999999998876654 46799
Q ss_pred EEccCCCcccc-cHHHHhccCCC-C-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFST-TIYENIKYGNE-D-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~~-~-----~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
.++||.-||.. ||++|+.+|.. . ...+.+..++.++|+.+|..+|| .+||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHH
Confidence 99999999985 99999999842 1 23567889999999999999999 4699999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhcc
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKE 1233 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~ 1233 (1253)
|+|+-+||+||||.|+|||.-++++...+.+.. ++.|+++|||.++.++. +|+++++++|||+++|+-+++++.+
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 999999999999999999999999999998876 47799999999999865 9999999999999999999999853
No 156
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-44 Score=369.01 Aligned_cols=223 Identities=32% Similarity=0.533 Sum_probs=195.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC---HHHHh
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN---LRSLR 1081 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~---~~~lR 1081 (1253)
.|+++||+.+||+ ++.+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|.++|.++...+ +..+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 467999999999999999999999999999999999999999999999999999887 56789
Q ss_pred cceEEEccCCCccc-ccHHHHhccCCC--------------CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000851 1082 RKIGLVQQEPALFS-TTIYENIKYGNE--------------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 1146 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~--------------~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1146 (1253)
++||+++|.+-|-+ -|+.+|+..|.- ..+.....+|++++++.++... +..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~q-----------ra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQ-----------RASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHH-----------HhccCC
Confidence 99999999999886 589999977631 1123446678888888776543 446899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEe
Q 000851 1147 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEI 1223 (1253)
Q Consensus 1147 gGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~ 1223 (1253)
|||+||++|||||..+|+|+|-|||+|+|||.+.+.|++.|++.. .|.|+|+.-|.++..++ ||||+-|++|+|+-.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999875 48999999999999866 999999999999999
Q ss_pred cChhHHhhcccchHHHHHHH
Q 000851 1224 GSHEQLLRKENGIYKQLIRL 1243 (1253)
Q Consensus 1224 Gt~~eLl~~~~g~y~~L~~~ 1243 (1253)
|++.||-+ ..+.+.|..
T Consensus 230 g~~~el~~---~~~~~iYg~ 246 (258)
T COG3638 230 GPASELTD---EALDEIYGN 246 (258)
T ss_pred CChhhhhH---HHHHHHhcc
Confidence 99999643 456666643
No 157
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-43 Score=404.73 Aligned_cols=220 Identities=27% Similarity=0.473 Sum_probs=187.0
Q ss_pred cEEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCC-------
Q 000851 1005 NIELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL------- 1075 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i------- 1075 (1253)
.|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999997421 24699999999999999999999999999999999999999999999999998653
Q ss_pred ---------CHHHHhcceEEEccCC--CcccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCC
Q 000851 1076 ---------NLRSLRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIELMKATKAANAHGFISRMPEGYQ-SHVGDR 1141 (1253)
Q Consensus 1076 ---------~~~~lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d~ei~~al~~a~l~~~I~~lp~gld-t~vge~ 1141 (1253)
+...+|++++||+|+| .+|+.|++|||.++.. ..+.++.. +. +.++++.+ |++ ...+..
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~---~~--~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAK---KL--AKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHH---HH--HHHHHHHc--CCChhHhcCC
Confidence 3567899999999998 6899999999988632 23333322 12 12344444 453 346677
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhh-ccCEEEEEeCCE
Q 000851 1142 GVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGK 1219 (1253)
Q Consensus 1142 G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ 1219 (1253)
+.+||||||||++|||||+++|+||||||||++||+.+++.+.+.|++.. +++|+|+|||+++.+. .||+|++|++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 88999999999999999999999999999999999999999999998864 5899999999999884 599999999999
Q ss_pred EEEecChhHHhh
Q 000851 1220 VAEIGSHEQLLR 1231 (1253)
Q Consensus 1220 ive~Gt~~eLl~ 1231 (1253)
+++.|+|+++++
T Consensus 254 i~~~g~~~~~~~ 265 (320)
T PRK13631 254 ILKTGTPYEIFT 265 (320)
T ss_pred EEEeCCHHHHhc
Confidence 999999998765
No 158
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-44 Score=394.31 Aligned_cols=212 Identities=40% Similarity=0.612 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCH---HHHhc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL---RSLRR 1082 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~---~~lR~ 1082 (1253)
|+++|++++|+ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 47899999996 3469999999999999999999999999999999999999999999999999987764 56789
Q ss_pred ceEEEccCCCcccc-cHHHHhccCCC---CCCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000851 1083 KIGLVQQEPALFST-TIYENIKYGNE---DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1083 ~i~~V~Qdp~Lf~g-TIreNl~~g~~---~~~d~----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrla 1154 (1253)
+++||||++.+|+. |++||+.++.. ..+.+ ++.++++..++.++. .....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 99999999999986 99999987521 12222 334445555443332 2334579999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999876
No 159
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.3e-43 Score=390.07 Aligned_cols=219 Identities=48% Similarity=0.798 Sum_probs=200.1
Q ss_pred ccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHh
Q 000851 1002 IKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLR 1081 (1253)
Q Consensus 1002 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR 1081 (1253)
..+.++++|++++|+++...++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45679999999999753234699999999999999999999999999999999999999999999999999888878888
Q ss_pred cceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000851 1082 RKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 1161 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr 1161 (1253)
++++|++|++.+|++|++||+.++......+++.+..+..++.++++.+|.|+++.+.....+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999998655444555666667778889999999999999999999999999999999999999
Q ss_pred CCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEE
Q 000851 1162 NPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKV 1220 (1253)
Q Consensus 1162 ~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~i 1220 (1253)
+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999998777899999999999988999999999975
No 160
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.8e-41 Score=362.92 Aligned_cols=473 Identities=20% Similarity=0.264 Sum_probs=353.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHH
Q 000851 728 LIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSII 807 (1253)
Q Consensus 728 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~r~s~D~~~i~~~~~~~l~~~ 807 (1253)
..|+++..+..+...+.......+++++..++|.++.++++..|+.-+++ -++++++.++++|+..+. +-...++.+
T Consensus 52 ~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier--~~~~rlla~L~~Dvr~IS-f~~s~lp~~ 128 (546)
T COG4615 52 PEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER--LGSARLLAGLTSDVRNIS-FAFSRLPEL 128 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH--hcccchhhhhccccccee-ehHhhhHHH
Confidence 34455555555666667777888999999999999999999999999874 789999999999999998 566678889
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcchHHHHHcCcHHH-
Q 000851 808 VQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKR- 886 (1253)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~- 886 (1253)
.+..+..+++.+...++|+++.+++.+.+.+.++..++......+.....++...+...+.+..++|.+..+...--.+
T Consensus 129 ~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~ 208 (546)
T COG4615 129 VQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEY 208 (546)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHH
Confidence 9999999999999999999988777776666666655555555555667778888889999999999999987653221
Q ss_pred -HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 887 -ISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLAL 965 (1253)
Q Consensus 887 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 965 (1253)
+.+.|...-+...+...+...........++.+.+....+.+|+..... .-+........+.+.+.-.++.+....
T Consensus 209 ~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~---w~st~~a~tivlvlLflr~pL~s~vgi 285 (546)
T COG4615 209 VHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLG---WASTNVAATIVLVLLFLRTPLLSAVGI 285 (546)
T ss_pred HHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhhHHHHHHHHHHHHhhHHHHHHhh
Confidence 2222222212222211111111111223344455555555566654432 222223333445556677788999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccccccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCC
Q 000851 966 APDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGS 1045 (1253)
Q Consensus 966 ~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGS 1045 (1253)
.|.+..+..|..++.++...++...-..++ ..|.-..||++||.|+|+.. .--+..||++|++||.|-|+|.|||
T Consensus 286 lP~l~~AqvA~~kiakle~~~~~a~~~~~q---~~p~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGs 360 (546)
T COG4615 286 LPTLLTAQVAFNKIAKLELAPYKADFPRPQ---AFPDWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGS 360 (546)
T ss_pred hhHHHHHHHHHHHHHHhhcCCccccCCCCC---cCCcccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCC
Confidence 999999999999998876543322211111 11223469999999999732 2347889999999999999999999
Q ss_pred cHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHHHHhccCCCC-CCHHHHHHHHHHhcHH
Q 000851 1046 GKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNED-ASEIELMKATKAANAH 1124 (1253)
Q Consensus 1046 GKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~-~~d~ei~~al~~a~l~ 1124 (1253)
||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|+-|-+||+.++ |.+. ++.+.+.+-+++..+.
T Consensus 361 GKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~ 434 (546)
T COG4615 361 GKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELA 434 (546)
T ss_pred cHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998754 2223 6677776666666554
Q ss_pred HHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccC
Q 000851 1125 GFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHR 1202 (1253)
Q Consensus 1125 ~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHr 1202 (1253)
.... +.+|==+ ...||-|||.|+|+--|++.+.+|++|||=-+--||.=++...+.+--.. .|||++.|||+
T Consensus 435 ~kts-l~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHD 508 (546)
T COG4615 435 HKTS-LNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHD 508 (546)
T ss_pred hhhc-ccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecC
Confidence 3322 2222111 14699999999999999999999999999999999999999888776543 49999999999
Q ss_pred chhhhccCEEEEEeCCEEEEe
Q 000851 1203 LSTIRNADKIAVLQQGKVAEI 1223 (1253)
Q Consensus 1203 l~ti~~~D~I~Vl~~G~ive~ 1223 (1253)
-.-...|||++.|++|+++|.
T Consensus 509 d~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 509 DHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred chhhhhHHHHHHHhcCceeec
Confidence 999999999999999999985
No 161
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-44 Score=374.99 Aligned_cols=197 Identities=36% Similarity=0.565 Sum_probs=176.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.+++++|+.+|++ ..||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.++|.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999973 5799999999999999999999999999999999999999999999999988443 4579
Q ss_pred EEEccCCCccc-ccHHHHhccCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFS-TTIYENIKYGNEDA------SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~-gTIreNl~~g~~~~------~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
+||+|++.||+ -|++||+.++.+.. ..+...++++.+|+.+|-++.| .+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHH
Confidence 99999999999 59999999885432 2345778889999998888777 579999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhh-ccCEEEEEeC--CEE
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIR-NADKIAVLQQ--GKV 1220 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~--G~i 1220 (1253)
||+.+|+||+||||.+|||+.|...+|+.+.+.. .++||++|||+.++.. -+|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999999999865 3689999999999865 5999999999 555
No 162
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-43 Score=373.57 Aligned_cols=207 Identities=39% Similarity=0.583 Sum_probs=174.9
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH---HH-
Q 000851 1006 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SL- 1080 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~---~l- 1080 (1253)
++++||+..|.... ..++|+++||+|++||.|||+||||||||||+++|.++..|++|.|.++|.|+..++.+ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999997432 24699999999999999999999999999999999999999999999999999999854 33
Q ss_pred hcceEEEccCCCccc-ccHHHHhccC----CCCC--CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1081 RRKIGLVQQEPALFS-TTIYENIKYG----NEDA--SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1081 R~~i~~V~Qdp~Lf~-gTIreNl~~g----~~~~--~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
|++||||+|+..|++ -|++||+.+. .... ..+...+.++..++.+... .....+||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 567999999999886 5999999842 1111 1334455555556654433 123468999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhccCEEEEEeCCEEEE
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQGKVAE 1222 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive 1222 (1253)
||||||+.+|+|++.||||.+||.+|.+.|++.+++.. .|+|+|+|||+......|||++.|.+|++.+
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999974 3789999999999999999999999999543
No 163
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=379.06 Aligned_cols=210 Identities=31% Similarity=0.566 Sum_probs=184.8
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++|++|+|+++ ++|+||||++++|++++|+||||||||||+|+|+|+.+|++|+|.++|.+.+.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 58999999999854 39999999999999999999999999999999999999999999999988765332 46799
Q ss_pred EEeccC---ccCcccHHHHHhcCCCCC----------CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 456 LVSQEP---ALFATSIANNILLGKEDA----------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 456 ~v~Q~~---~lf~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
||||.. |-|+-||+|-+.+|+... +.+++.+|++.+++.++..+ .+ .+|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i----~~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QI----GELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------cc----cccCcHHHHH
Confidence 999965 568889999999985322 24789999999998877644 23 4799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
+-|||||+++|++|+|||||+++|+.++..+.+.|+++++ |+|+++|||+++.+.. +|+|+.| |++++..|++++..
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhcc
Confidence 9999999999999999999999999999999999999965 8999999999999865 8999988 56678899999887
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 64
No 164
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-44 Score=402.63 Aligned_cols=222 Identities=35% Similarity=0.593 Sum_probs=200.1
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcc
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 1083 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~ 1083 (1253)
..|+++||+.+|. +..+++|+||+|++||.+.++|||||||||++++|.||..|++|+|.+||.|+..++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3599999999996 45799999999999999999999999999999999999999999999999999998876 579
Q ss_pred eEEEccCCCccc-ccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1084 IGLVQQEPALFS-TTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~-gTIreNl~~g~~---~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
|++|+|+..||+ .||+|||.||.. ... ++.+.++++.+++.++-.+.| .+|||||+||+||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHH
Confidence 999999999997 599999999964 112 246788999999998877766 5799999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhh-hccCEEEEEeCCEEEEecChhHHhhc
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTI-RNADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
||||..+|++||||||-|+||..-+..++.-+++.. .|.|.|+|||+-++. .-+|||+||++|+|...|+|+|+..+
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 999999999999999999999999999999999865 388999999998876 55999999999999999999999998
Q ss_pred ccchHHHHH
Q 000851 1233 ENGIYKQLI 1241 (1253)
Q Consensus 1233 ~~g~y~~L~ 1241 (1253)
+...|-.-+
T Consensus 228 P~~~fVA~F 236 (352)
T COG3842 228 PATRFVADF 236 (352)
T ss_pred cchHHHHHH
Confidence 777665544
No 165
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=9.3e-40 Score=385.94 Aligned_cols=468 Identities=17% Similarity=0.156 Sum_probs=350.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCch------HHHHHHHHHHHHHHHHHHHH
Q 000851 100 YLVYLGLVALVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDS------NIIFHISSDAILVQDAIGDK 173 (1253)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~f~~~~~~G------~l~sr~~~D~~~i~~~~~~~ 173 (1253)
++..++.+..+....+.|+...+..+...-+-+.+.++.+...-.|+.. ..| ..=.|+..|+....+...+.
T Consensus 91 ~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~--~~~~~~~~dNpDQRi~eDi~~~t~~t~~l 168 (604)
T COG4178 91 VFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLA--QAGGIGLIDNPDQRIQEDIRNFTETTLDL 168 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH--hcccccCCCChHHhHHHHHHHHHhhHHHH
Confidence 3334433444444455555555555555555566666667666444432 333 22369999998888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000851 174 TGHALRYLSQFFVGFAVGFT---------------SVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVA 238 (1253)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (1253)
...++.++++++.-.+++.- +...+..++++.+++..++..+++|.+.+..-+.++..++....+
T Consensus 169 ~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~L 248 (604)
T COG4178 169 SFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSL 248 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHH
Confidence 77777777666554444432 222334455556666666777888999898888899999999999
Q ss_pred HHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHH
Q 000851 239 EEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTT 318 (1253)
Q Consensus 239 ~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~ 318 (1253)
...-++...|-.|+.|+.|.++.++......+...+......-...+......++.++-+..++-....|+++.|.++..
T Consensus 249 vrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa 328 (604)
T COG4178 249 VRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQA 328 (604)
T ss_pred HHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHH
Confidence 99999999999999999999888777766665554444433333333333333333333444556678899999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--C-CCCCCCCCCC---CCCCCcEEEEEEEEECCCCCCc
Q 000851 319 IINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKENSHS--S-ERPGDDGITL---PKLAGQIEFSEVCFAYPSRPHM 392 (1253)
Q Consensus 319 ~~~~~~~~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~--~-~~~~~~~~~~---~~~~~~i~~~~v~f~y~~~~~~ 392 (1253)
...+......++.+...+..+..-++...|+.++-+.-... + ..+....... ...+..|+++|++..-|+.. .
T Consensus 329 ~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~~-~ 407 (604)
T COG4178 329 VGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDGQ-T 407 (604)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCCC-e
Confidence 77777777788999999999999999999999987433211 1 0001100000 11146799999999998654 5
Q ss_pred ccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHH
Q 000851 393 VFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNI 472 (1253)
Q Consensus 393 ~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni 472 (1253)
.+++.||++++||.+.|.||||||||||++.|+|+++--+|+|.... ...+-|+||.|++-.||.||-|
T Consensus 408 ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre~l 476 (604)
T COG4178 408 LLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLREAL 476 (604)
T ss_pred eeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHHHHH
Confidence 89999999999999999999999999999999999999999997752 1358899999999999999999
Q ss_pred hcCCCC--CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHH
Q 000851 473 LLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESE 550 (1253)
Q Consensus 473 ~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~ 550 (1253)
+|.... .+++++.+++.++++.++++++.+-.+ =...||+|||||+|+||.++++|++++|||+|||||+++|
T Consensus 477 ~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e 551 (604)
T COG4178 477 CYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETE 551 (604)
T ss_pred hCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHH
Confidence 998765 689999999999999999999854221 3356999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEe
Q 000851 551 LIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLK 586 (1253)
Q Consensus 551 ~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~ 586 (1253)
..+.+.+++...+.|+|-|+||.......++.+-+.
T Consensus 552 ~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 552 DRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 999999999889999999999988877776655443
No 166
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=9.4e-44 Score=391.51 Aligned_cols=212 Identities=37% Similarity=0.600 Sum_probs=183.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccC-----CCCccEEEECCccCCCCC--HH
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFY-----DPISGTVLIDGYDIRTLN--LR 1078 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~-----~p~~G~I~idG~di~~i~--~~ 1078 (1253)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999973 36999999999999999999999999999999999999 999999999999998776 56
Q ss_pred HHhcceEEEccCCCcccccHHHHhccCCCC---C----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1079 SLRRKIGLVQQEPALFSTTIYENIKYGNED---A----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1079 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~---~----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
.+|++++|+||++.+|+.|++||+.++... . .++++.++++..++.+...+.++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 788999999999999988999999875321 1 12345566666666554433211 4689999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999998655899999999999865 999999999999999998764
No 167
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-43 Score=401.12 Aligned_cols=220 Identities=25% Similarity=0.471 Sum_probs=187.6
Q ss_pred cEEEEEEEEECCCCC---CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCC-------
Q 000851 376 QIEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL------- 445 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~---~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~------- 445 (1253)
.|+++|++|+|++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|+++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 589999999997421 2499999999999999999999999999999999999999999999999998653
Q ss_pred ---------CHHHHhcccEEEeccC--ccCcccHHHHHhcCCC--CCCHHHHHHHHHHhCcHHHHhcCCCCcc-ccccCC
Q 000851 446 ---------QLKWLREQMGLVSQEP--ALFATSIANNILLGKE--DASMDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEG 511 (1253)
Q Consensus 446 ---------~~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~ 511 (1253)
+...+|++|+||+|+| ++|+.|++|||.++.. ..+.++..+ . +.++++.+ |++ ...++.
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~---~--~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK---L--AKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH---H--HHHHHHHc--CCChhHhcCC
Confidence 3457889999999998 7899999999998742 223333221 1 12344444 554 456778
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhh-hcCEEEEEeCCE
Q 000851 512 GTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQ 589 (1253)
Q Consensus 512 g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~vl~~G~ 589 (1253)
+.+||||||||++|||||+++|++||||||||+||+.+++.+.+.|.++. +++|+|+|||+++.+. .||+|++|++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999998874 5899999999999875 599999999999
Q ss_pred EEEeeCcchhhhc
Q 000851 590 VVESGTHVDLISK 602 (1253)
Q Consensus 590 i~~~g~~~~l~~~ 602 (1253)
+++.|+++++...
T Consensus 254 i~~~g~~~~~~~~ 266 (320)
T PRK13631 254 ILKTGTPYEIFTD 266 (320)
T ss_pred EEEeCCHHHHhcC
Confidence 9999999998764
No 168
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=6.1e-40 Score=387.53 Aligned_cols=474 Identities=18% Similarity=0.144 Sum_probs=353.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccC---CChhHHHHHHHhhHHHHHHHHH
Q 000851 725 QVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDE---NNTGLLISTLAADATLVRSALA 801 (1253)
Q Consensus 725 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~---~~~G~l~~r~s~D~~~i~~~~~ 801 (1253)
..+.+|..++.+..+....+.|+......++..-|-+.+.++-+...-.|+.... +..-..=.|+.+|+..+-+...
T Consensus 87 ~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~ 166 (604)
T COG4178 87 QQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTL 166 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHH
Confidence 3456677777777777888889888888888888888888888877744433211 1112234789999988888766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---------------hHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 000851 802 DRLSIIVQNVALTVTAFVIAFIL---------------SWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATS 866 (1253)
Q Consensus 802 ~~l~~~~~~~~~~~~~~~~~~~~---------------~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 866 (1253)
.....++.+++.++....+++-. ...+.+++++.+++--++.+...+.+.+..-+..+..+....
T Consensus 167 ~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~ 246 (604)
T COG4178 167 DLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRY 246 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHH
Confidence 66666777766666555554421 112222222223333333334444444455555566666677
Q ss_pred HHHHHHcchHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Q 000851 867 VAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIM 946 (1253)
Q Consensus 867 ~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~~~ 946 (1253)
.+.-.-++.+.|..|+-|+...++..+.++.......+..........+......+..++-+..++-....|++++|+++
T Consensus 247 ~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lm 326 (604)
T COG4178 247 SLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLM 326 (604)
T ss_pred HHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHH
Confidence 77777889999999999998888887777766665555444444444444444445555555556666778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cCCCCCCCC--ccc---ccccCcEEEEeEEEECCCCC
Q 000851 947 KSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKT--AIQPDDPAS--KEV---TEIKGNIELRNVSFKYPVRP 1019 (1253)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~~--~~~~~~~~~--~~~---~~~~g~I~~~~Vsf~Y~~~~ 1019 (1253)
.+..+......+++.....++.+..-.....|+.++..... ..+++.+.. ... ...+..|+|+|++..-|..
T Consensus 327 qa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~- 405 (604)
T COG4178 327 QAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG- 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC-
Confidence 99988888888999999999999988888999877754322 111111111 000 1114679999999998743
Q ss_pred CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccccHH
Q 000851 1020 DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIY 1099 (1253)
Q Consensus 1020 ~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~gTIr 1099 (1253)
.+.++++||.|+|||.+-|.|+||||||||+++|.|+++..+|+|.+-. -..+-|+||.|++-.||+|
T Consensus 406 -~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLr 473 (604)
T COG4178 406 -QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLR 473 (604)
T ss_pred -CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHH
Confidence 4689999999999999999999999999999999999999999987641 1358899999999999999
Q ss_pred HHhccCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCCh
Q 000851 1100 ENIKYGNED--ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDT 1177 (1253)
Q Consensus 1100 eNl~~g~~~--~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~ 1177 (1253)
|=|+|.+.. .+|+|+.+++.++++.++++++.+- ..-...||+|||||||+||.|+++|++++|||||||||+
T Consensus 474 e~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~-----~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe 548 (604)
T COG4178 474 EALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEE-----DRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDE 548 (604)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhcc-----CcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccCh
Confidence 999998654 7899999999999999999997432 224467999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEe
Q 000851 1178 ASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQ 1216 (1253)
Q Consensus 1178 ~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~ 1216 (1253)
++|..+.+.+++...++|+|.|+||.....-.++.+-++
T Consensus 549 ~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 549 ETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 999999999999999999999999988877777766554
No 169
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-43 Score=390.20 Aligned_cols=217 Identities=33% Similarity=0.536 Sum_probs=183.5
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCH---HHHhcc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL---KWLREQ 453 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~~ 453 (1253)
|+++|++++|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+.
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGGR--TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 4789999999743 49999999999999999999999999999999999999999999999999877654 567889
Q ss_pred cEEEeccCccCcc-cHHHHHhcCCC---CCCHH----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 000851 454 MGLVSQEPALFAT-SIANNILLGKE---DASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 525 (1253)
Q Consensus 454 i~~v~Q~~~lf~~-ti~~ni~~g~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriai 525 (1253)
|+||+|++.+|+. |++||+.++.. ..+.+ ++.++++..++. ........+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLR-----------GAEDLYPAELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCCHHHHHHHHH
Confidence 9999999999986 99999987632 12222 233334444333 23344456899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 526 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 526 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999999998753 7899999999998875 899999999999999999888754
Q ss_pred CchH
Q 000851 603 GGEY 606 (1253)
Q Consensus 603 ~~~y 606 (1253)
...|
T Consensus 228 ~~~~ 231 (235)
T cd03261 228 DDPL 231 (235)
T ss_pred CChh
Confidence 4333
No 170
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-44 Score=378.77 Aligned_cols=215 Identities=32% Similarity=0.507 Sum_probs=184.4
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCH-HHHhccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL-KWLREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~i 454 (1253)
.|+++|+++.|+..+ +++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.+||..+.+.+. ..-.++|
T Consensus 2 ~i~i~~~~~~~~~~~--a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~V 79 (345)
T COG1118 2 SIRINNVKKRFGAFG--ALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKV 79 (345)
T ss_pred ceeehhhhhhccccc--ccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcce
Confidence 378899999998544 9999999999999999999999999999999999999999999999994443332 3334689
Q ss_pred EEEeccCccCc-ccHHHHHhcCCC------C--CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 000851 455 GLVSQEPALFA-TSIANNILLGKE------D--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 525 (1253)
Q Consensus 455 ~~v~Q~~~lf~-~ti~~ni~~g~~------~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriai 525 (1253)
|+|+|+..||. .||++||+||.+ + ....++.+.++.+++..+-++.| .+||||||||+||
T Consensus 80 GfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRVAL 148 (345)
T COG1118 80 GFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRVAL 148 (345)
T ss_pred eEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHHHH
Confidence 99999999995 599999999962 1 12345666667776666555555 5899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 526 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 526 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||||+.+|++|+||||+++||++-.+.+++.|+++.+ |.|+++|||+.+++. .||||+||++|+|...|+++|....
T Consensus 149 ARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~ 228 (345)
T COG1118 149 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDH 228 (345)
T ss_pred HHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcC
Confidence 9999999999999999999999999999999988753 789999999999875 4899999999999999999999766
Q ss_pred C
Q 000851 603 G 603 (1253)
Q Consensus 603 ~ 603 (1253)
+
T Consensus 229 P 229 (345)
T COG1118 229 P 229 (345)
T ss_pred C
Confidence 4
No 171
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-43 Score=391.51 Aligned_cols=219 Identities=32% Similarity=0.543 Sum_probs=191.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC---CCccEEEECCccCCCCCHHHHh
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD---PISGTVLIDGYDIRTLNLRSLR 1081 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~---p~~G~I~idG~di~~i~~~~lR 1081 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++...+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999973 469999999999999999999999999999999999985 6899999999999988888889
Q ss_pred cceEEEccCCCcccccHHHHhccCCC--------CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1082 RKIGLVQQEPALFSTTIYENIKYGNE--------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~gTIreNl~~g~~--------~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
++++|+||+|.+|+.|++||+.++.. ...++++.++++..++.+++.. .....+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 99999999999999999999987521 1122345566777766554432 23445678999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
+|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999998778999999999998865 999999999999999999999864
Q ss_pred c
Q 000851 1233 E 1233 (1253)
Q Consensus 1233 ~ 1233 (1253)
+
T Consensus 232 ~ 232 (246)
T PRK14269 232 P 232 (246)
T ss_pred C
Confidence 3
No 172
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-43 Score=407.63 Aligned_cols=219 Identities=29% Similarity=0.500 Sum_probs=192.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+. +.++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+||.++.++++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999952 34699999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEccCCCccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~-gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
+||+|++.+|+ .|++|||.++.. ..+ .+++.++++..++.++..+.| .+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 599999998642 122 245667788888877766554 579999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhccc
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1234 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~ 1234 (1253)
||+++|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~ 227 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPA 227 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCc
Confidence 99999999999999999999999999999998754 7899999999998754 99999999999999999999988665
Q ss_pred chHH
Q 000851 1235 GIYK 1238 (1253)
Q Consensus 1235 g~y~ 1238 (1253)
..|.
T Consensus 228 ~~~~ 231 (356)
T PRK11650 228 STFV 231 (356)
T ss_pred cHHH
Confidence 5554
No 173
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-43 Score=397.31 Aligned_cols=217 Identities=32% Similarity=0.556 Sum_probs=190.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999742224599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCC--cccccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1085 GLVQQEPA--LFSTTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1085 ~~V~Qdp~--Lf~gTIreNl~~g~~~--~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
+||+|+|. ++..|++|||.++... .+ ++.+.++++.+++.++....| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 99999983 6678999999876321 22 244667777777766655433 57999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhc
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
|||+++|++|||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 8999999999999978999999999999999999998763
No 174
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-43 Score=407.19 Aligned_cols=219 Identities=33% Similarity=0.558 Sum_probs=191.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+ +.++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...++ .+++|
T Consensus 6 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDI 80 (351)
T ss_pred EEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 599999999996 3468999999999999999999999999999999999999999999999999987664 36789
Q ss_pred EEEccCCCcccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
+||+|++.+|+. |++||+.++.. ..+ ++++.++++..++.++..+. ...||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRY-----------VDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 999999999975 99999998632 122 34566677777776554443 3579999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhccc
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1234 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~ 1234 (1253)
||+++|++||||||||+||+.+.+.+++.|++..+ ++|+|+|||+++.+.. ||+|+||++|++++.|+|+++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 7899999999999855 99999999999999999999988666
Q ss_pred chHHH
Q 000851 1235 GIYKQ 1239 (1253)
Q Consensus 1235 g~y~~ 1239 (1253)
..|..
T Consensus 230 ~~~~a 234 (351)
T PRK11432 230 SRFMA 234 (351)
T ss_pred chHHH
Confidence 55443
No 175
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-43 Score=387.93 Aligned_cols=225 Identities=36% Similarity=0.560 Sum_probs=192.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCCcccccHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000851 1085 GLVQQEPALFSTTIYENIKYGNED--ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 1162 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~gTIreNl~~g~~~--~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~ 1162 (1253)
+|+||+|.+|+.|++||+.++... ..++++.+.++..++.+ ........+||||||||++|||||+++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNK----------EYATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999875321 12234444555444421 112334568999999999999999999
Q ss_pred CCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhcccchHHH
Q 000851 1163 PSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKENGIYKQ 1239 (1253)
Q Consensus 1163 p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~ 1239 (1253)
|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++...+...|.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 99999999999999999999999999874 37999999999999875 9999999999999999999998754445665
Q ss_pred HHH
Q 000851 1240 LIR 1242 (1253)
Q Consensus 1240 L~~ 1242 (1253)
.+.
T Consensus 230 ~~~ 232 (241)
T PRK14250 230 LFI 232 (241)
T ss_pred HHH
Confidence 553
No 176
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-43 Score=405.88 Aligned_cols=222 Identities=36% Similarity=0.570 Sum_probs=187.5
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---Hh
Q 000851 1006 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS---LR 1081 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~---lR 1081 (1253)
|+++||+++|+... +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997321 356999999999999999999999999999999999999999999999999998887654 57
Q ss_pred cceEEEccCCCccc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000851 1082 RKIGLVQQEPALFS-TTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrla 1154 (1253)
++|+||||++.+|+ .|++||+.++.. ..+. +++.++++..++.++ ......+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDK-----------ADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHHH
Confidence 89999999999986 699999987521 1222 234444444444333 33344689999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999987
Q ss_pred cccchHH
Q 000851 1232 KENGIYK 1238 (1253)
Q Consensus 1232 ~~~g~y~ 1238 (1253)
.+...+.
T Consensus 231 ~~~~~~~ 237 (343)
T PRK11153 231 HPKHPLT 237 (343)
T ss_pred CCCcHHH
Confidence 5443343
No 177
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.4e-42 Score=376.52 Aligned_cols=205 Identities=39% Similarity=0.639 Sum_probs=183.4
Q ss_pred ccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHh
Q 000851 1002 IKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLR 1081 (1253)
Q Consensus 1002 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR 1081 (1253)
..+.++++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|
T Consensus 3 ~~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 81 (207)
T cd03369 3 EHGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLR 81 (207)
T ss_pred CCCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHH
Confidence 34679999999999742 24699999999999999999999999999999999999999999999999999888888889
Q ss_pred cceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000851 1082 RKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 1161 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr 1161 (1253)
++++||||+|.+|++|++||+.+.. ..+++++.++++ ++.....|||||+||++||||+++
T Consensus 82 ~~i~~v~q~~~~~~~tv~~~l~~~~-~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 82 SSLTIIPQDPTLFSGTIRSNLDPFD-EYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred hhEEEEecCCcccCccHHHHhcccC-CCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999998754 234444444433 234567899999999999999999
Q ss_pred CCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecCh
Q 000851 1162 NPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSH 1226 (1253)
Q Consensus 1162 ~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~ 1226 (1253)
+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999998778999999999999988999999999999998874
No 178
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.3e-43 Score=404.53 Aligned_cols=218 Identities=31% Similarity=0.515 Sum_probs=188.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.++. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999973 4589999999999999999999999999999999999999999999999999877654 6789
Q ss_pred EEEccCCCccc-ccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFS-TTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~-gTIreNl~~g~~~--~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
+||+|++.+|+ .|++||+.++... .+ ++.+.++++..++.++. .....+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSE-----------RKYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchh-----------hCChhhCCHHHHHHHHHHH
Confidence 99999999997 6999999986321 12 23344555555544443 3445689999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhccc
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1234 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~ 1234 (1253)
||+++|++||||||||+||+.+.+.+++.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++.
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~ 227 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPA 227 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 7899999999999755 99999999999999999999998665
Q ss_pred chHH
Q 000851 1235 GIYK 1238 (1253)
Q Consensus 1235 g~y~ 1238 (1253)
..|.
T Consensus 228 ~~~~ 231 (353)
T TIGR03265 228 TPFV 231 (353)
T ss_pred CHHH
Confidence 5553
No 179
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.4e-42 Score=381.90 Aligned_cols=218 Identities=52% Similarity=0.869 Sum_probs=198.2
Q ss_pred CCCcEEEEEEEEECCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHh
Q 000851 373 LAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLR 451 (1253)
Q Consensus 373 ~~~~i~~~~v~f~y~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 451 (1253)
..+.++++|++++|+++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...++
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 346799999999997532 2499999999999999999999999999999999999999999999999998877777788
Q ss_pred cccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000851 452 EQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 531 (1253)
Q Consensus 452 ~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~ 531 (1253)
+.++|++|++.+|+.|++||+.++.......++.+.++...+.++++.+|.|+++.+.+.+.+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 89999999999999999999998765444555555666677889999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000851 532 NPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQV 590 (1253)
Q Consensus 532 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i 590 (1253)
+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999998778999999999999988999999999974
No 180
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-42 Score=403.52 Aligned_cols=214 Identities=30% Similarity=0.517 Sum_probs=187.1
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++|++++|++ ...+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+||.++.+.++. ++.||
T Consensus 3 ~l~i~~l~~~~~~-~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDG-KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCC-CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 3899999999942 23499999999999999999999999999999999999999999999999999877654 46899
Q ss_pred EEeccCccCc-ccHHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 456 LVSQEPALFA-TSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 456 ~v~Q~~~lf~-~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
||+|++.+|+ .||+|||.|+... .+ .+++.++++..++.++..+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999996 4999999997532 12 234566677777766665555 4899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
|+++|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..+.
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 9999999999999999999999999999998754 7899999999998754 8999999999999999999987653
No 181
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=8.8e-43 Score=383.82 Aligned_cols=212 Identities=34% Similarity=0.556 Sum_probs=181.5
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccC-----CCCCcEEEECCeeCCCCC--HHH
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLY-----EPTSGKILLDGHDLKSLQ--LKW 449 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~-----~~~~G~i~~~g~~~~~~~--~~~ 449 (1253)
|+++||+++|+++ ++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++.+.+ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 5789999999753 4999999999999999999999999999999999999 999999999999987766 566
Q ss_pred HhcccEEEeccCccCcccHHHHHhcCCCCC---C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 450 LREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 450 ~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
+|++++|++|++.+|+.|++||+.++.... . .+++.++++..++.+.+.+.++ +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 788999999999999779999998753211 1 2344555555555444333211 46899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchh
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 599 (1253)
++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999998655899999999998865 899999999999999987764
No 182
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-42 Score=402.25 Aligned_cols=213 Identities=31% Similarity=0.537 Sum_probs=186.0
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. +++||
T Consensus 6 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 81 (351)
T PRK11432 6 FVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDIC 81 (351)
T ss_pred EEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 5899999999974 3499999999999999999999999999999999999999999999999999876643 57899
Q ss_pred EEeccCccCcc-cHHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 456 LVSQEPALFAT-SIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
||+|++.+|+. |++|||.|+... .+ .+++.++++..++.++..+ .+.+||||||||+|||||
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r-----------~~~~LSgGq~QRVaLARa 150 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDR-----------YVDQISGGQQQRVALARA 150 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHHHH
Confidence 99999999975 999999997431 12 2455566666666554444 346899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
|+.+|++||||||||+||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+++++..+.
T Consensus 151 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p 228 (351)
T PRK11432 151 LILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQP 228 (351)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999999999998854 7999999999999855 8999999999999999999987653
No 183
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-42 Score=388.42 Aligned_cols=224 Identities=33% Similarity=0.516 Sum_probs=190.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~--i~~ 1077 (1253)
.|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5999999999963 4699999999999999999999999999999999999997 48999999998853 345
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCCC---CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNED---AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~---~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++|+||++.+|+.|++|||.++... .+ ++.+.++++.+++.+.+ ++.+++ ...+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHH
Confidence 5788999999999999999999999875311 11 23455666666654332 223444 4568999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhcccchHH
Q 000851 1230 LRKENGIYK 1238 (1253)
Q Consensus 1230 l~~~~g~y~ 1238 (1253)
.+++...|.
T Consensus 237 ~~~~~~~~~ 245 (254)
T PRK14273 237 FFNPKNTKT 245 (254)
T ss_pred HhCCCChHH
Confidence 865444443
No 184
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-42 Score=391.58 Aligned_cols=213 Identities=32% Similarity=0.554 Sum_probs=187.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 24699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCC--CcccccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1085 GLVQQEP--ALFSTTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1085 ~~V~Qdp--~Lf~gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
+||||+| .+|..|++||+.++.. ..+ ++++.++++.+++.++..+.| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 6788999999987532 122 234566777777766655444 47999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHHh
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
|||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 99999999999999999999999999999999875 4899999999999985 59999999999999999987653
No 185
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-42 Score=394.61 Aligned_cols=217 Identities=34% Similarity=0.575 Sum_probs=184.6
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC--HHHHh
Q 000851 1006 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN--LRSLR 1081 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~--~~~lR 1081 (1253)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 146999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cceEEEccCC--CcccccHHHHhccCCC--CCCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1082 RKIGLVQQEP--ALFSTTIYENIKYGNE--DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1082 ~~i~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d~----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
++|+||||+| .+|+.|++|||.++.. ..+.+ .+.++++.+++. +.+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5788999999987531 22333 344455554442 01223445578999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHHh
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||+|||+++.+. .||||++|++|++++.|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 789999999999985 59999999999999999999987
Q ss_pred h
Q 000851 1231 R 1231 (1253)
Q Consensus 1231 ~ 1231 (1253)
+
T Consensus 234 ~ 234 (287)
T PRK13637 234 K 234 (287)
T ss_pred h
Confidence 5
No 186
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.1e-42 Score=385.66 Aligned_cols=221 Identities=29% Similarity=0.531 Sum_probs=184.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHH-hcce
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL-RRKI 1084 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~l-R~~i 1084 (1253)
++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 46899999996 3469999999999999999999999999999999999999999999999999988876654 6789
Q ss_pred EEEccCCCcccc-cHHHHhccCCCCCCHHHH-------HHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1085 GLVQQEPALFST-TIYENIKYGNEDASEIEL-------MKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~~~~~d~ei-------~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
+|+||++.+|++ |++||+.++........+ ........+.++++.+ |++.........||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999986 999999875321100000 0000111233444443 455555566678999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 99999999999999999999999999999999875 68899999999999966 99999999999999999999875
No 187
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.8e-42 Score=386.03 Aligned_cols=222 Identities=34% Similarity=0.564 Sum_probs=188.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC-----ccEEEECCccCCCC--CHH
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI-----SGTVLIDGYDIRTL--NLR 1078 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~-----~G~I~idG~di~~i--~~~ 1078 (1253)
|+++||+++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999973 35999999999999999999999999999999999999998 99999999998763 456
Q ss_pred HHhcceEEEccCCCcccccHHHHhccCCC--C-CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1079 SLRRKIGLVQQEPALFSTTIYENIKYGNE--D-AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1079 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~-~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
.+|++++|+||++.+|+.|++||+.++.. . .+ ++++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 77899999999999999999999986421 1 11 234555666666653221 1233445689999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998767899999999999865 9999999999999999999998
Q ss_pred hcccchH
Q 000851 1231 RKENGIY 1237 (1253)
Q Consensus 1231 ~~~~g~y 1237 (1253)
..+...+
T Consensus 232 ~~~~~~~ 238 (247)
T TIGR00972 232 TNPKEKR 238 (247)
T ss_pred hCCCChH
Confidence 6444443
No 188
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.7e-43 Score=402.22 Aligned_cols=208 Identities=33% Similarity=0.540 Sum_probs=182.0
Q ss_pred CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHH----hcceEEEccCCCccc
Q 000851 1020 DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL----RRKIGLVQQEPALFS 1095 (1253)
Q Consensus 1020 ~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~l----R~~i~~V~Qdp~Lf~ 1095 (1253)
+.++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|++||.++...+...+ |++++||+|++.+|+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 3458999999999999999999999999999999999999999999999999999998887 789999999999998
Q ss_pred -ccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000851 1096 -TTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLL 1168 (1253)
Q Consensus 1096 -gTIreNl~~g~~~--~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlL 1168 (1253)
.|++|||.++.+. .+ .+++.++++.+++.++..+. ..+||||||||++|||||+++|+||||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~-----------p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRY-----------PDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCC-----------hhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 5999999875321 12 34566677777776555444 457999999999999999999999999
Q ss_pred ecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHHhhcccchHH
Q 000851 1169 DEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLRKENGIYK 1238 (1253)
Q Consensus 1169 DEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~ 1238 (1253)
|||||+||+.+.+.+++.+.+.. .++|+|+|||+++.+. .||+|++|++|++++.|+|+++++++...|.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 99999999999999999999874 3799999999999874 5999999999999999999999875544443
No 189
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-42 Score=384.59 Aligned_cols=211 Identities=32% Similarity=0.553 Sum_probs=180.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999973 469999999999999999999999999999999999999999999999999876543 367899
Q ss_pred EEccCCCccc-ccHHHHhccCCCCC------C----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000851 1086 LVQQEPALFS-TTIYENIKYGNEDA------S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1086 ~V~Qdp~Lf~-gTIreNl~~g~~~~------~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrla 1154 (1253)
||||+|.+|+ .|++||+.++.... + .+++.++++..++.++. .....+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLA-----------DRYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHH
Confidence 9999999986 69999998753211 1 12334445555544333 3344679999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999998765 99999999999999999999976
Q ss_pred c
Q 000851 1232 K 1232 (1253)
Q Consensus 1232 ~ 1232 (1253)
.
T Consensus 227 ~ 227 (239)
T cd03296 227 H 227 (239)
T ss_pred C
Confidence 4
No 190
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-42 Score=387.37 Aligned_cols=219 Identities=32% Similarity=0.557 Sum_probs=188.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~--i~~ 1077 (1253)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 4999999999963 469999999999999999999999999999999999975 589999999999865 345
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC--C-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--D-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~-----~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++|+||++.+|+.|++||+.++.. . ..++++.++++.+++.+++. ...+....+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHHH
Confidence 678899999999999999999999986521 1 11345566666666654332 223455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998668899999999999865 999999999999999999999
Q ss_pred hhcc
Q 000851 1230 LRKE 1233 (1253)
Q Consensus 1230 l~~~ 1233 (1253)
.+.+
T Consensus 236 ~~~~ 239 (253)
T PRK14242 236 FTRP 239 (253)
T ss_pred HcCC
Confidence 8643
No 191
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-42 Score=390.66 Aligned_cols=216 Identities=36% Similarity=0.574 Sum_probs=188.0
Q ss_pred cEEEEEEEEECCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 376 QIEFSEVCFAYPSR-PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
-++++||+++|++. ...+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999742 23499999999999999999999999999999999999999999999999999887887888999
Q ss_pred EEEeccCc--cCcccHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 455 GLVSQEPA--LFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 455 ~~v~Q~~~--lf~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
+||+|+|. ++..|++|||.++... .+. +++.++++..++.++.+.. ..+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKERE-----------PARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 99999983 5567999999987432 222 3455666666665554443 458999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+.+++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998853 7999999999999988999999999999999998887654
No 192
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-42 Score=385.79 Aligned_cols=213 Identities=36% Similarity=0.577 Sum_probs=182.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC---HHHHhc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN---LRSLRR 1082 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~---~~~lR~ 1082 (1253)
++++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999963 146999999999999999999999999999999999999999999999999998876 456789
Q ss_pred ceEEEccCCCccc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000851 1083 KIGLVQQEPALFS-TTIYENIKYGNED--------------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 1147 (1253)
Q Consensus 1083 ~i~~V~Qdp~Lf~-gTIreNl~~g~~~--------------~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSg 1147 (1253)
+++|+||++.+|. .|++||+.++... ..++++.++++..++. ......+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLL-----------DKAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCCh-----------hhhCCCcccCCH
Confidence 9999999999887 6999999864321 1122334444444443 333445678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhh-ccCEEEEEeCCEEEEec
Q 000851 1148 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1148 GQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G 1224 (1253)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+. .||++++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 3899999999999997 49999999999999999
Q ss_pred ChhHHhh
Q 000851 1225 SHEQLLR 1231 (1253)
Q Consensus 1225 t~~eLl~ 1231 (1253)
+++++.+
T Consensus 228 ~~~~~~~ 234 (241)
T cd03256 228 PPAELTD 234 (241)
T ss_pred CHHHhhH
Confidence 9998743
No 193
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-42 Score=386.70 Aligned_cols=222 Identities=34% Similarity=0.566 Sum_probs=190.1
Q ss_pred cCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCC--C
Q 000851 1003 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--L 1075 (1253)
Q Consensus 1003 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~--i 1075 (1253)
.+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 456999999999973 369999999999999999999999999999999999996 589999999999853 4
Q ss_pred CHHHHhcceEEEccCCCcccccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChh
Q 000851 1076 NLRSLRRKIGLVQQEPALFSTTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 1148 (1253)
Q Consensus 1076 ~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~---~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgG 1148 (1253)
+...+|++++|+||++.+|+.|++||+.++.. ..+ ++++.++++.+++.+.+ ....+....+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEV-------KDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhh-------HHHHhcCCCCCCHH
Confidence 56678999999999999999999999987532 122 23455666666653322 22344556789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChh
Q 000851 1149 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHE 1227 (1253)
Q Consensus 1149 QkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~ 1227 (1253)
||||++|||||+++|+||||||||++||+.+++.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778899999999999865 9999999999999999999
Q ss_pred HHhhccc
Q 000851 1228 QLLRKEN 1234 (1253)
Q Consensus 1228 eLl~~~~ 1234 (1253)
++...+.
T Consensus 241 ~~~~~~~ 247 (260)
T PRK10744 241 TIFTKPA 247 (260)
T ss_pred HHHhCCC
Confidence 9986433
No 194
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2e-42 Score=404.34 Aligned_cols=222 Identities=27% Similarity=0.518 Sum_probs=195.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+ +.++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.+++...+|+++
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 389999999996 35699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCc-ccccHHHHhccCCC----------CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1085 GLVQQEPAL-FSTTIYENIKYGNE----------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1085 ~~V~Qdp~L-f~gTIreNl~~g~~----------~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
+||+|++.+ |+.|++||+.++.. ..+.+.+.++++.+++.++..+ ...+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHH
Confidence 999999987 67899999987641 1123456778888887665533 2357999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
+|||||+++|+||||||||++||+.+...+++.|+++. +++|+|+++|+++.+.. |||+++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999875 47899999999999955 99999999999999999999886
Q ss_pred cccchHHHHHH
Q 000851 1232 KENGIYKQLIR 1242 (1253)
Q Consensus 1232 ~~~g~y~~L~~ 1242 (1253)
. ..+.+++.
T Consensus 229 ~--~~l~~~~~ 237 (402)
T PRK09536 229 A--DTLRAAFD 237 (402)
T ss_pred c--HHHHHHhC
Confidence 2 34555553
No 195
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.5e-42 Score=401.89 Aligned_cols=213 Identities=30% Similarity=0.489 Sum_probs=184.7
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++||+++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+||+++.+.++. ++.||
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999974 3499999999999999999999999999999999999999999999999999876654 57899
Q ss_pred EEeccCccCc-ccHHHHHhcCCCCC--C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 456 LVSQEPALFA-TSIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 456 ~v~Q~~~lf~-~ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
||+|++.+|+ .|++||+.|+.... + .+++.++++..++ +......+.+||||||||+|||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L-----------~~~~~~~~~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGL-----------PGSERKYPGQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------CchhhCChhhCCHHHHHHHHHHHH
Confidence 9999999996 59999999974321 1 2234444444444 334445567899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
|+.+|++||||||||+||+.+.+.+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|+++++..+.
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999999999998754 7899999999998755 8999999999999999999998753
No 196
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.9e-42 Score=401.04 Aligned_cols=217 Identities=32% Similarity=0.536 Sum_probs=187.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++...++ .|++|+
T Consensus 3 L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 3 IEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 889999999973 469999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEccCCCccc-ccHHHHhccCCC------CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000851 1086 LVQQEPALFS-TTIYENIKYGNE------DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1086 ~V~Qdp~Lf~-gTIreNl~~g~~------~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrla 1154 (1253)
||+|++.+|+ .|++||+.++.. ..+ ++++.++++..++.++..+ ...+||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADR-----------YPAQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHH
Confidence 9999999997 599999998632 112 2345556666666544433 33679999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||||+++|++||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998754 7899999999999765 99999999999999999999987
Q ss_pred cccchHH
Q 000851 1232 KENGIYK 1238 (1253)
Q Consensus 1232 ~~~g~y~ 1238 (1253)
++...|.
T Consensus 227 ~p~~~~~ 233 (353)
T PRK10851 227 EPATRFV 233 (353)
T ss_pred CccchHH
Confidence 6554443
No 197
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.8e-42 Score=401.23 Aligned_cols=217 Identities=35% Similarity=0.598 Sum_probs=191.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...++. ++++
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 4689999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEEccCCCcccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
+||+|++.+|+. |++|||.++.. ..+ ++++.++++..++.++..+.| .+||||||||+||||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999975 99999998642 112 234566777777777666555 579999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhccc
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1234 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~ 1234 (1253)
||+++|++||||||||+||+.+++.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++.+++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998754 7899999999999754 99999999999999999999988665
Q ss_pred chH
Q 000851 1235 GIY 1237 (1253)
Q Consensus 1235 g~y 1237 (1253)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 444
No 198
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-42 Score=391.81 Aligned_cols=216 Identities=25% Similarity=0.487 Sum_probs=183.1
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCC----CCHHH
Q 000851 1006 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT----LNLRS 1079 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~----i~~~~ 1079 (1253)
|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997321 1359999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEccCC--CcccccHHHHhccCCCC--CCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1080 LRRKIGLVQQEP--ALFSTTIYENIKYGNED--ASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1080 lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~~--~~d~----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
+|++++||+|+| .+|+.|+.||+.++... .+.+ ++.++++.+++.+ ........+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~----------~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLAD----------EFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhccCCcccCCHHHHH
Confidence 899999999998 78999999999876321 2222 2334444444421 1123445689999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHH
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
|++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998865 4889999999999885 5999999999999999999998
Q ss_pred hh
Q 000851 1230 LR 1231 (1253)
Q Consensus 1230 l~ 1231 (1253)
..
T Consensus 232 ~~ 233 (288)
T PRK13643 232 FQ 233 (288)
T ss_pred Hc
Confidence 76
No 199
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.8e-42 Score=379.62 Aligned_cols=211 Identities=31% Similarity=0.527 Sum_probs=179.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++||+++|+.. ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEE
Confidence 5789999999732 14699999999999999999999999999999999999999999999999998764 366788999
Q ss_pred EEccCCCcc-cccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALF-STTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf-~gTIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
||+|++.+| ..|+++|+.++.. ..+. +++.++++..++.+.. + ....+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------N----KRARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------h----ChhhhCCHHHHHHHHHHHH
Confidence 999999998 5799999986421 1121 2344455555443332 2 2335799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
|+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999998778999999999999865 999999999999999999875
No 200
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-42 Score=389.74 Aligned_cols=215 Identities=33% Similarity=0.580 Sum_probs=190.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 38999999999632 34699999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEccCC--CcccccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1085 GLVQQEP--ALFSTTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1085 ~~V~Qdp--~Lf~gTIreNl~~g~~~--~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
+|+||+| .+++.|++|||.++... .+ ++++.++++..++.+++...| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 46678999999875211 12 234566777777766665544 47999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhh
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999999998763 789999999999998899999999999999999999876
No 201
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.5e-42 Score=400.74 Aligned_cols=201 Identities=34% Similarity=0.528 Sum_probs=177.6
Q ss_pred cccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHH----hcccEEEeccCccCcc-
Q 000851 392 MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL----REQMGLVSQEPALFAT- 466 (1253)
Q Consensus 392 ~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~lf~~- 466 (1253)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||+++...+..++ |++|+||+|++++|+.
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 49999999999999999999999999999999999999999999999999999888877 7899999999999975
Q ss_pred cHHHHHhcCCCCC--C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeC
Q 000851 467 SIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDE 540 (1253)
Q Consensus 467 ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE 540 (1253)
||+|||.++.+.. + .+++.++++..++.++. ++.+.+||||||||++|||||+.+|+||||||
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~-----------~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYE-----------HRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhh-----------hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 9999999874321 1 24455666666555444 44456899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 541 ATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 541 ~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
|||+||+.+.+.+++.+.++. .++|+|+|||+++.+. .||+|++|++|++++.|++++++.+.
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p 221 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNP 221 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCc
Confidence 999999999999999999875 3799999999999865 58999999999999999999998763
No 202
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-42 Score=392.69 Aligned_cols=220 Identities=32% Similarity=0.562 Sum_probs=185.5
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCC----CHHH
Q 000851 1006 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL----NLRS 1079 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i----~~~~ 1079 (1253)
|+++||+++|+..+ ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997322 24699999999999999999999999999999999999999999999999998654 3457
Q ss_pred HhcceEEEccCC--CcccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccc-cccCCCCCCChhHHHHHH
Q 000851 1080 LRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIELMKATKAANAHGFISRMPEGYQS-HVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1080 lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d~ei~~al~~a~l~~~I~~lp~gldt-~vge~G~~LSgGQkQrla 1154 (1253)
+|++|+||||+| .+|+.|++|||.++.. ..+.++..+. +.+.++.+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 899999999998 5888999999987532 1233332221 22333333 5553 344567889999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHHhh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||||+.+|+||||||||++||+.+...+.+.|+++. .|+|||+|||+++.+. .||+|++|++|++++.|+++++++
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 4899999999999985 599999999999999999999876
Q ss_pred c
Q 000851 1232 K 1232 (1253)
Q Consensus 1232 ~ 1232 (1253)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 3
No 203
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.2e-42 Score=379.67 Aligned_cols=203 Identities=33% Similarity=0.570 Sum_probs=175.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH---HHhc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLRR 1082 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~---~lR~ 1082 (1253)
|+++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999632 24699999999999999999999999999999999999999999999999998776543 4788
Q ss_pred ceEEEccCCCccc-ccHHHHhccCCC------CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1083 KIGLVQQEPALFS-TTIYENIKYGNE------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1083 ~i~~V~Qdp~Lf~-gTIreNl~~g~~------~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
+++|+||+|.+|. .|++||+.++.. ...++++.++++..++.++..+.| .+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999887 599999986421 112345667777777765544433 5799999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEE
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKV 1220 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~i 1220 (1253)
||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 47899999999999975 999999999985
No 204
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-42 Score=383.97 Aligned_cols=218 Identities=28% Similarity=0.472 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC---CCCcEEEECCeeCCCCCHHHHhc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE---PTSGKILLDGHDLKSLQLKWLRE 452 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~~~~~~~~~~r~ 452 (1253)
.|+++|+++.|++. .+|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.+.+...+|+
T Consensus 2 ~~~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGKK--QALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECCE--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 37899999999743 49999999999999999999999999999999999985 69999999999998887778888
Q ss_pred ccEEEeccCccCcccHHHHHhcCCCC--------CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 453 QMGLVSQEPALFATSIANNILLGKED--------ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 453 ~i~~v~Q~~~lf~~ti~~ni~~g~~~--------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
.|+|++|++.+|+.|++||+.++... ...+++.++++..++.+++. +...+.+.+||||||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVK-------DKLKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhh-------HHhcCCcccCCHHHHHHHH
Confidence 99999999999999999999876311 01123445555555544332 2345567899999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||||++++|+++||||||++||+.+...+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999999998778999999999998865 899999999999999999988654
No 205
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-42 Score=387.48 Aligned_cols=222 Identities=31% Similarity=0.538 Sum_probs=189.8
Q ss_pred cCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCC--C
Q 000851 1003 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--L 1075 (1253)
Q Consensus 1003 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~--i 1075 (1253)
.+.|+++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|++||.++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999963 4699999999999999999999999999999999999975 89999999999865 3
Q ss_pred CHHHHhcceEEEccCCCcccccHHHHhccCCC--CC--C----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000851 1076 NLRSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA--S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 1147 (1253)
Q Consensus 1076 ~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~--~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSg 1147 (1253)
+...+|++++|+||+|.+|+.|++||+.++.. .. + ++++.++++.+++.+++. ...+..+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 45678899999999999999999999986421 10 1 234566666666644332 223445678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecCh
Q 000851 1148 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSH 1226 (1253)
Q Consensus 1148 GQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~ 1226 (1253)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988778899999999999965 999999999999999999
Q ss_pred hHHhhccc
Q 000851 1227 EQLLRKEN 1234 (1253)
Q Consensus 1227 ~eLl~~~~ 1234 (1253)
++++..+.
T Consensus 247 ~~~~~~~~ 254 (267)
T PRK14235 247 EKMFTNPD 254 (267)
T ss_pred HHHHhCCC
Confidence 99986433
No 206
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.5e-42 Score=400.39 Aligned_cols=219 Identities=30% Similarity=0.483 Sum_probs=189.0
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCc--cEEEECCccCCCCCHHHHh
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPIS--GTVLIDGYDIRTLNLRSLR 1081 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~--G~I~idG~di~~i~~~~lR 1081 (1253)
+.|+++||+++|+. .++|+|+||+|++||+++|+||||||||||+++|.|+++|++ |+|.+||.++...++ .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 56999999999963 469999999999999999999999999999999999999999 999999999987665 46
Q ss_pred cceEEEccCCCcccc-cHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000851 1082 RKIGLVQQEPALFST-TIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~g-TIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrla 1154 (1253)
++|+||+|++.+|+. |++|||.++.. ..+. +++.++++..++.++..+. ..+||||||||+|
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~-----------~~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHL-----------PAQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCC-----------hhhCCHHHHHHHH
Confidence 789999999999975 99999987632 1222 2355556666665554443 3579999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC---CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME---GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~---~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
|||||+++|++||||||||+||+.+.+.+.+.|++..+ |.|+|+|||+++.+.. ||+|+||++|++++.|+++++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999998754 6899999999999755 9999999999999999999999
Q ss_pred hcccchHH
Q 000851 1231 RKENGIYK 1238 (1253)
Q Consensus 1231 ~~~~g~y~ 1238 (1253)
+++...|.
T Consensus 228 ~~p~~~~~ 235 (362)
T TIGR03258 228 DAPADGFA 235 (362)
T ss_pred hCcCcHHH
Confidence 86655543
No 207
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-42 Score=389.65 Aligned_cols=219 Identities=34% Similarity=0.555 Sum_probs=185.5
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHH----hc
Q 000851 1007 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL----RR 1082 (1253)
Q Consensus 1007 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~l----R~ 1082 (1253)
.++||+++|. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ ++
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 4567777775 3468999999999999999999999999999999999999999999999999988765543 46
Q ss_pred ceEEEccCCCccc-ccHHHHhccCCC--CC----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1083 KIGLVQQEPALFS-TTIYENIKYGNE--DA----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1083 ~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
+++|+||++.+|+ .|++||+.++.. .. .++++.++++..++.+++.+.| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 8999999999885 699999986421 11 1234566677777666555443 4799999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
||||+++|+||||||||++||+.+.+.+.+.|++.. .|+|+|++||+++.+.. ||++++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999874 37999999999999865 999999999999999999999875
Q ss_pred ccchHHH
Q 000851 1233 ENGIYKQ 1239 (1253)
Q Consensus 1233 ~~g~y~~ 1239 (1253)
+...|.+
T Consensus 252 ~~~~~~~ 258 (269)
T cd03294 252 PANDYVR 258 (269)
T ss_pred cCcHHHH
Confidence 5554544
No 208
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-42 Score=381.51 Aligned_cols=215 Identities=37% Similarity=0.585 Sum_probs=183.6
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH---HHh
Q 000851 1006 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLR 1081 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~---~lR 1081 (1253)
|+++|++++|+.+. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999997321 12699999999999999999999999999999999999999999999999999877654 357
Q ss_pred cceEEEccCCCccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000851 1082 RKIGLVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrla 1154 (1253)
++++|+||++.+|. .|++||+.++.. ..+ .+++.++++..++.+... ....+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKAD-----------AYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhh-----------cChhhCCHHHHHHHH
Confidence 89999999999997 699999986421 111 234455555555544433 344689999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-C-CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLM-E-GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~-~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||||+++|++|||||||++||+.+.+.+.+.|++.. + ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999999875 3 7899999999999865 99999999999999999998875
No 209
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.1e-42 Score=383.32 Aligned_cols=221 Identities=27% Similarity=0.509 Sum_probs=185.2
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHH-hcccE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL-REQMG 455 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i~ 455 (1253)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 468999999974 349999999999999999999999999999999999999999999999999987776544 56799
Q ss_pred EEeccCccCcc-cHHHHHhcCCCCCCHHHH-------HHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 456 LVSQEPALFAT-SIANNILLGKEDASMDRV-------IEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~~~~~~~-------~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
|++|++.+|.. |++||+.++........+ ........+++.++.+ |++...+....+||||||||++|||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 156 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIAR 156 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHHH
Confidence 99999999986 999999886432110000 0001111233445554 5666667777899999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
|++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 157 ALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 9999999999999999999999999999999876 68899999999999866 89999999999999999888754
No 210
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.1e-42 Score=383.70 Aligned_cols=212 Identities=34% Similarity=0.558 Sum_probs=181.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCH---HHHhc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL---RSLRR 1082 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~---~~lR~ 1082 (1253)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999961 3469999999999999999999999999999999999999999999999999887654 34788
Q ss_pred ceEEEccCCCccc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000851 1083 KIGLVQQEPALFS-TTIYENIKYGNED--------------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 1147 (1253)
Q Consensus 1083 ~i~~V~Qdp~Lf~-gTIreNl~~g~~~--------------~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSg 1147 (1253)
+++||||++.+|. .|++||+.++... ..++++.++++..++.+ .......+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLAD-----------KAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHh-----------hhcCCcccCCH
Confidence 9999999999886 6999999865311 01223444444444433 33345578999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEec
Q 000851 1148 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1148 GQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1224 (1253)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999874 37899999999999865 9999999999999999
Q ss_pred ChhHHh
Q 000851 1225 SHEQLL 1230 (1253)
Q Consensus 1225 t~~eLl 1230 (1253)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999874
No 211
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-42 Score=385.86 Aligned_cols=225 Identities=31% Similarity=0.471 Sum_probs=188.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCC--CCCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIR--TLNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~--~i~~ 1077 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 4699999999999999999999999999999999999987 4999999999987 4556
Q ss_pred HHHhcceEEEccCCCcccc-cHHHHhccCCC--C--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChh
Q 000851 1078 RSLRRKIGLVQQEPALFST-TIYENIKYGNE--D--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 1148 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~g-TIreNl~~g~~--~--~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgG 1148 (1253)
..+|++++|+||++.+|+. |++||+.++.. . .+ ++++.++++..++.+.+. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 6788999999999999975 99999986421 1 01 233455566555543322 2234455789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChh
Q 000851 1149 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHE 1227 (1253)
Q Consensus 1149 QkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~ 1227 (1253)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 9999999999999999999
Q ss_pred HHhhcccchHHH
Q 000851 1228 QLLRKENGIYKQ 1239 (1253)
Q Consensus 1228 eLl~~~~g~y~~ 1239 (1253)
++++.+...|.+
T Consensus 234 ~~~~~~~~~~~~ 245 (253)
T PRK14267 234 KVFENPEHELTE 245 (253)
T ss_pred HHHhCCCcHHHH
Confidence 998643333433
No 212
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.2e-42 Score=378.21 Aligned_cols=217 Identities=30% Similarity=0.460 Sum_probs=180.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHH-hcce
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL-RRKI 1084 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~l-R~~i 1084 (1253)
|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.... |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 469999999999999999999999999999999999999999999999999988876654 6789
Q ss_pred EEEccCCCcccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000851 1085 GLVQQEPALFST-TIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 1163 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p 1163 (1253)
+|+||++.+|++ |++||+.++.......+..+. +.++++.++ +++........+||||||||++|||||+++|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKAR-----LERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHH-----HHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 999999876432211111111 111222211 1223334455679999999999999999999
Q ss_pred CEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1164 SILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1164 ~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999875 57899999999999866 99999999999999999988764
No 213
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-42 Score=388.23 Aligned_cols=217 Identities=32% Similarity=0.547 Sum_probs=189.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
-|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334699999999999999999999999999999999999999999999999999887777889999
Q ss_pred EEEccCC--CcccccHHHHhccCCC--CCCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1085 GLVQQEP--ALFSTTIYENIKYGNE--DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1085 ~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d~----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
+|++|+| .++..|+.|||.++.. ..+.+ .+.++++.+++.++..+ ....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 9999998 4678899999986522 22332 34556666666555433 3367999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhc
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
|||+++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998754 7899999999999988999999999999999999998863
No 214
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-42 Score=378.05 Aligned_cols=203 Identities=39% Similarity=0.616 Sum_probs=173.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ..+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEE
Confidence 478999999963 46999999999999999999999999999999999999999999999999987654 3578899
Q ss_pred EEccCCCccc-ccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFS-TTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~-gTIreNl~~g~~~--~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|+||+|.+|. .|++||+.++... .+ .+++.++++..++.++.. ....+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLN-----------RYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHHHHHH
Confidence 9999999886 6999999865221 11 223445555555544433 3346799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEec
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1224 (1253)
|+++|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999874 37899999999999865 9999999999999875
No 215
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-42 Score=384.16 Aligned_cols=227 Identities=29% Similarity=0.463 Sum_probs=191.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCCCCHHH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTLNLRS 1079 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~i~~~~ 1079 (1253)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 4699999999999999999999999999999999999984 6999999999998888888
Q ss_pred HhcceEEEccCCCcc-cccHHHHhccCCC--C--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1080 LRRKIGLVQQEPALF-STTIYENIKYGNE--D--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1080 lR~~i~~V~Qdp~Lf-~gTIreNl~~g~~--~--~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
+|++|+|+||+|.+| +.|++||+.++.. . .. ++++.++++..++.+.+. ........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCcccCCHHHH
Confidence 999999999999755 5799999986431 0 01 234566666666543322 122334467999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999985 4999999999999999999999
Q ss_pred hhcccchHHHHH
Q 000851 1230 LRKENGIYKQLI 1241 (1253)
Q Consensus 1230 l~~~~g~y~~L~ 1241 (1253)
.+.+...+.+.+
T Consensus 233 ~~~~~~~~~~~~ 244 (250)
T PRK14247 233 FTNPRHELTEKY 244 (250)
T ss_pred HcCCccHHHHHH
Confidence 875444444433
No 216
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-42 Score=382.60 Aligned_cols=217 Identities=35% Similarity=0.577 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
++++||+++|+.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999731 46999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCCccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~-gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|+||+|.+|+ .|++||+.++.. ..+ ++++.++++..++.+ +......+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999999986 699999976421 111 122333333333321 013345567899999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhcc
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKE 1233 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~ 1233 (1253)
|+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+..
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 227 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSP 227 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCC
Confidence 9999999999999999999999999999998753 7999999999998755 9999999999999999999987643
No 217
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-42 Score=397.31 Aligned_cols=215 Identities=37% Similarity=0.589 Sum_probs=183.6
Q ss_pred EEEEEEEEECCC--CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH---Hh
Q 000851 377 IEFSEVCFAYPS--RPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW---LR 451 (1253)
Q Consensus 377 i~~~~v~f~y~~--~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 451 (1253)
|+++||+|+|++ +...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 1235999999999999999999999999999999999999999999999999998776543 47
Q ss_pred cccEEEeccCccCc-ccHHHHHhcCCCC--CCHH----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 452 EQMGLVSQEPALFA-TSIANNILLGKED--ASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 452 ~~i~~v~Q~~~lf~-~ti~~ni~~g~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
++||||+|++.+|. .|++||+.++... .+.+ ++.+.++.. |++........+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELV-----------GLSDKADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCchhhhCChhhCCHHHHHHHH
Confidence 88999999999986 5999999876321 1222 233333333 3333444556789999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
|||||+.+|++||||||||+||+.+.+.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998853 7899999999999876 89999999999999999999876
Q ss_pred c
Q 000851 602 K 602 (1253)
Q Consensus 602 ~ 602 (1253)
.
T Consensus 231 ~ 231 (343)
T PRK11153 231 H 231 (343)
T ss_pred C
Confidence 5
No 218
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=6e-42 Score=398.49 Aligned_cols=213 Identities=32% Similarity=0.569 Sum_probs=187.2
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. ++.||
T Consensus 14 ~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 89 (375)
T PRK09452 14 LVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHVN 89 (375)
T ss_pred eEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 5899999999974 3499999999999999999999999999999999999999999999999999876654 46899
Q ss_pred EEeccCccCcc-cHHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 456 LVSQEPALFAT-SIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
||+|++.||+. ||+|||.|+... .+ .+++.++++..++.++..+.| .+||||||||++||||
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLARa 158 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIARA 158 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999966 999999987531 12 234566677677666665555 4899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
|+.+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++..+.
T Consensus 159 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 159 VVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 9999999999999999999999999999998854 7899999999998754 8999999999999999999987653
No 219
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-42 Score=388.86 Aligned_cols=214 Identities=29% Similarity=0.508 Sum_probs=185.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCC--CCCHHHHhc
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIR--TLNLRSLRR 1082 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~--~i~~~~lR~ 1082 (1253)
-|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999962 346999999999999999999999999999999999999999999999999984 344567899
Q ss_pred ceEEEccCC--CcccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000851 1083 KIGLVQQEP--ALFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1083 ~i~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrla 1154 (1253)
+++|+||+| .+|+.|++||+.++.. ..+. +.+.++++..++.++ ......+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHHHHH
Confidence 999999998 5788999999987421 1222 234555566655443 23445789999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHHhh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||||+.+|+||||||||++||+.+.+.+.+.|++..+ |+|||++||+++.+. .||+|++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998753 799999999999997 599999999999999999999876
No 220
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.1e-42 Score=376.45 Aligned_cols=203 Identities=33% Similarity=0.542 Sum_probs=173.0
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH---HHhcc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLREQ 453 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~~ 453 (1253)
|+++|++++|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 689999999964323499999999999999999999999999999999999999999999999998765533 46789
Q ss_pred cEEEeccCccCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 454 MGLVSQEPALFAT-SIANNILLGKED------ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 454 i~~v~Q~~~lf~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
++|++|++.+|.. |++||+.++... ...+++.++++..++.++..+ ...+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHA-----------LPMQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHHHH
Confidence 9999999998874 999999875211 112345556666655544433 3458999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQV 590 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i 590 (1253)
|||+.+|++|||||||++||+.+.+.+.+.|.++. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999875 47899999999999875 899999999975
No 221
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.9e-41 Score=381.06 Aligned_cols=220 Identities=30% Similarity=0.491 Sum_probs=196.1
Q ss_pred ccCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHh
Q 000851 1002 IKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLR 1081 (1253)
Q Consensus 1002 ~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR 1081 (1253)
..+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------ 98 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------ 98 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC------------
Confidence 44579999999952 3599999999999999999999999999999999999999999999998
Q ss_pred cceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000851 1082 RKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 1161 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr 1161 (1253)
+++|+||++.+|++|++||+.++.. ..+.++.++++.+++.+.+..+|.++++.+++.+.+||||||||++|||||++
T Consensus 99 -~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~ 176 (282)
T cd03291 99 -RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYK 176 (282)
T ss_pred -EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 3999999999999999999987542 23445667788888889999999999999999999999999999999999999
Q ss_pred CCCEEEEecccCCCChHHHHHHHHHH-HHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhcccchHHHH
Q 000851 1162 NPSILLLDEATSALDTASENLIQEAL-DKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQL 1240 (1253)
Q Consensus 1162 ~p~ILlLDEaTS~LD~~te~~I~~~l-~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L 1240 (1253)
+|++|||||||++||+.+.+.+.+.+ ++..+++|+|+|||+++.+..||++++|++|++++.|+++++.+. ...|.+.
T Consensus 177 ~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~ 255 (282)
T cd03291 177 DADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSSK 255 (282)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHHH
Confidence 99999999999999999999998754 555568999999999999988999999999999999999999863 4556655
Q ss_pred H
Q 000851 1241 I 1241 (1253)
Q Consensus 1241 ~ 1241 (1253)
+
T Consensus 256 ~ 256 (282)
T cd03291 256 L 256 (282)
T ss_pred H
Confidence 5
No 222
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-42 Score=386.85 Aligned_cols=217 Identities=31% Similarity=0.553 Sum_probs=189.3
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
-++++||+++|++.+.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.+...+++.|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 38999999999753345999999999999999999999999999999999999999999999999998887777888999
Q ss_pred EEeccC--ccCcccHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 456 LVSQEP--ALFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 456 ~v~Q~~--~lf~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
|++|++ .+++.|++|||.++... .+. +++.++++..++.+++...| .+||||||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 45677999999886322 122 34555666666666555544 489999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+.+++.+..
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKSG 231 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcCH
Confidence 99999999999999999999999999999998864 78999999999999889999999999999999998887653
No 223
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-42 Score=400.87 Aligned_cols=218 Identities=33% Similarity=0.522 Sum_probs=187.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+. .+++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCE
Confidence 3899999999963 469999999999999999999999999999999999999999999999999987665 35789
Q ss_pred EEEccCCCcccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
+||+|++.+|+. |++||+.++.. ..+ ++++.++++..++.++..+ ...+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~-----------~~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDR-----------KPKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcC-----------ChhhCCHHHHHHHHHHH
Confidence 999999999974 99999987632 112 2345566666666544433 33579999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhccc
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1234 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~ 1234 (1253)
||+++|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998753 7899999999998865 99999999999999999999987555
Q ss_pred chHH
Q 000851 1235 GIYK 1238 (1253)
Q Consensus 1235 g~y~ 1238 (1253)
..|.
T Consensus 227 ~~~~ 230 (369)
T PRK11000 227 NRFV 230 (369)
T ss_pred cHHH
Confidence 4443
No 224
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-42 Score=390.75 Aligned_cols=216 Identities=31% Similarity=0.519 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCC----CCHHH
Q 000851 1006 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT----LNLRS 1079 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~----i~~~~ 1079 (1253)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997422 1469999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEccCC--CcccccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1080 LRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1080 lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d~e----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
+|++++||||+| .+|+.|++|||.++.. ..+.++ +.++++.+++.+ ........+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPE----------ELLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCh----------hhhhCCcccCCHHHHH
Confidence 888999999998 6888999999987632 123332 334444444421 1123445689999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhH
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1228 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~e 1228 (1253)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+ |.|||+|||+++.+.. ||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 7899999999999855 99999999999999999999
Q ss_pred Hhh
Q 000851 1229 LLR 1231 (1253)
Q Consensus 1229 Ll~ 1231 (1253)
+.+
T Consensus 233 ~~~ 235 (290)
T PRK13634 233 IFA 235 (290)
T ss_pred Hhc
Confidence 875
No 225
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-42 Score=385.26 Aligned_cols=212 Identities=31% Similarity=0.563 Sum_probs=185.0
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
-|+++||+|+|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+..+++++||
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999632 34999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEeccC--ccCcccHHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 456 LVSQEP--ALFATSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 456 ~v~Q~~--~lf~~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
||+|+| .++..|+.||+.++... .+ .+++.++++..++.++..+.| .+||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999998 57888999999986421 12 234555666666655554444 489999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchh
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l 599 (1253)
||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999999999999885 4799999999999985 5999999999999999988654
No 226
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=7.1e-42 Score=393.31 Aligned_cols=226 Identities=26% Similarity=0.427 Sum_probs=188.7
Q ss_pred cEEEEeEEEECCCCC----------CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCC
Q 000851 1005 NIELRNVSFKYPVRP----------DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT 1074 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~----------~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~ 1074 (1253)
-|+++|++++|+.+. ..++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999997421 2468999999999999999999999999999999999999999999999999998
Q ss_pred CCHH---HHhcceEEEccCC--Ccc-cccHHHHhccCC----CCCCHHH----HHHHHHHhcHHHHHHhCCCCccccccC
Q 000851 1075 LNLR---SLRRKIGLVQQEP--ALF-STTIYENIKYGN----EDASEIE----LMKATKAANAHGFISRMPEGYQSHVGD 1140 (1253)
Q Consensus 1075 i~~~---~lR~~i~~V~Qdp--~Lf-~gTIreNl~~g~----~~~~d~e----i~~al~~a~l~~~I~~lp~gldt~vge 1140 (1253)
++.. .+|++|+||+|+| .++ ..||.+||.++. +..+.++ +.++++.+++.+ .....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhcC
Confidence 8754 3678999999999 477 479999986531 1233333 334444444421 12234
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeC
Q 000851 1141 RGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQ 1217 (1253)
Q Consensus 1141 ~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~ 1217 (1253)
...+||||||||++|||||+.+|++||+||||++||..+.+.|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4568999999999999999999999999999999999999999999998753 7899999999999976 999999999
Q ss_pred CEEEEecChhHHhhcccchHHHH
Q 000851 1218 GKVAEIGSHEQLLRKENGIYKQL 1240 (1253)
Q Consensus 1218 G~ive~Gt~~eLl~~~~g~y~~L 1240 (1253)
|+|+|.|+++++++++...|.+.
T Consensus 238 G~ive~g~~~~i~~~~~~py~~~ 260 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTKA 260 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHHH
Confidence 99999999999987655666653
No 227
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=6.7e-42 Score=382.69 Aligned_cols=218 Identities=31% Similarity=0.533 Sum_probs=184.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC---------
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN--------- 1076 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~--------- 1076 (1253)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999973 46999999999999999999999999999999999999999999999999987653
Q ss_pred ----HHHHhcceEEEccCCCccc-ccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCC
Q 000851 1077 ----LRSLRRKIGLVQQEPALFS-TTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQ 1144 (1253)
Q Consensus 1077 ----~~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~---~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~ 1144 (1253)
...+|++++|++|++.+|. .|++||+.++.. ... ++++.++++..++.++ ......+
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADK-----------ADHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhH-----------hhcChhh
Confidence 2467899999999999885 799999987421 111 2334455555554443 3344568
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEE
Q 000851 1145 LSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVA 1221 (1253)
Q Consensus 1145 LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~iv 1221 (1253)
||||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 7899999999999865 9999999999999
Q ss_pred EecChhHHhhcccchH
Q 000851 1222 EIGSHEQLLRKENGIY 1237 (1253)
Q Consensus 1222 e~Gt~~eLl~~~~g~y 1237 (1253)
+.|+++++.+.....|
T Consensus 227 ~~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 227 EQGKPDEIFRQPKEER 242 (252)
T ss_pred EeCCHHHHhcCCCcHH
Confidence 9999999986544334
No 228
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.5e-42 Score=397.19 Aligned_cols=212 Identities=31% Similarity=0.503 Sum_probs=183.2
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||+++...+. .+++|+
T Consensus 2 ~L~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGRT--QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCCe--EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 37899999999753 49999999999999999999999999999999999999999999999999976554 356899
Q ss_pred EEeccCccCcc-cHHHHHhcCCCC------CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 456 LVSQEPALFAT-SIANNILLGKED------AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~------~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
||+|++.+|+. |++||+.|+... .+ .+++.++++..++.++. .....+||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLA-----------DRYPAQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHHHH
Confidence 99999999975 999999987431 12 23444455555544443 3445689999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
|||||+.+|++||||||||+||+.++..+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998854 7899999999998765 89999999999999999999876
Q ss_pred c
Q 000851 602 K 602 (1253)
Q Consensus 602 ~ 602 (1253)
+
T Consensus 227 ~ 227 (353)
T PRK10851 227 E 227 (353)
T ss_pred C
Confidence 5
No 229
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.1e-42 Score=397.77 Aligned_cols=214 Identities=29% Similarity=0.472 Sum_probs=185.1
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCC--cEEEECCeeCCCCCHHHHhc
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS--GKILLDGHDLKSLQLKWLRE 452 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~--G~i~~~g~~~~~~~~~~~r~ 452 (1253)
+.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.+.+. .++
T Consensus 4 ~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~r 79 (362)
T TIGR03258 4 GGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HKR 79 (362)
T ss_pred eEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HHC
Confidence 57999999999974 349999999999999999999999999999999999999999 999999999976655 356
Q ss_pred ccEEEeccCccCcc-cHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 000851 453 QMGLVSQEPALFAT-SIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 525 (1253)
Q Consensus 453 ~i~~v~Q~~~lf~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriai 525 (1253)
.||||+|++.+|.. |++|||.|+... .+. +++.++++..++.++.. ....+||||||||+||
T Consensus 80 ~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRvaL 148 (362)
T TIGR03258 80 GLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAA-----------HLPAQLSGGMQQRIAI 148 (362)
T ss_pred CEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhh-----------CChhhCCHHHHHHHHH
Confidence 89999999999966 999999987421 122 23445555555544444 4445899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC---CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 526 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS---NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 526 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~---~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
||||+.+|++||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 ARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~ 228 (362)
T TIGR03258 149 ARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYD 228 (362)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999998754 6899999999999765 89999999999999999999976
Q ss_pred cC
Q 000851 602 KG 603 (1253)
Q Consensus 602 ~~ 603 (1253)
+.
T Consensus 229 ~p 230 (362)
T TIGR03258 229 AP 230 (362)
T ss_pred Cc
Confidence 53
No 230
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.7e-41 Score=367.97 Aligned_cols=202 Identities=37% Similarity=0.630 Sum_probs=180.6
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
+.++++|++++|++....+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|++|
T Consensus 5 ~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 84 (207)
T cd03369 5 GEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSSL 84 (207)
T ss_pred CeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 56999999999975333599999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000851 455 GLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPK 534 (1253)
Q Consensus 455 ~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ 534 (1253)
+||+|+|.+|++|++||+.+... ...+++.++++ +++++.+||||||||++||||++.+|+
T Consensus 85 ~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 85 TIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999986542 33444433332 245677899999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeC
Q 000851 535 ILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGT 595 (1253)
Q Consensus 535 ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 595 (1253)
++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 9999999999999999999999999877899999999999998899999999999998875
No 231
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=386.05 Aligned_cols=217 Identities=33% Similarity=0.546 Sum_probs=183.7
Q ss_pred EEEEEEEEECCCCC---CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCC--HHHHh
Q 000851 377 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ--LKWLR 451 (1253)
Q Consensus 377 i~~~~v~f~y~~~~---~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--~~~~r 451 (1253)
|+++||+|+|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 34999999999999999999999999999999999999999999999999997653 45678
Q ss_pred cccEEEeccC--ccCcccHHHHHhcCCC--CCCHHH----HHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 000851 452 EQMGLVSQEP--ALFATSIANNILLGKE--DASMDR----VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 523 (1253)
Q Consensus 452 ~~i~~v~Q~~--~lf~~ti~~ni~~g~~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qri 523 (1253)
++||||+|+| .+|+.|++||+.++.. ..+.++ +.++++..++. +.+.....+.+||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 8999999998 5788899999998642 123332 33344433332 11345566789999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhh
Q 000851 524 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 524 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|+|||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998853 789999999999885 59999999999999999998876
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
+.
T Consensus 234 ~~ 235 (287)
T PRK13637 234 KE 235 (287)
T ss_pred hC
Confidence 53
No 232
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=377.04 Aligned_cols=215 Identities=34% Similarity=0.560 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.++++|++|+|+++ .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFGK--EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 48999999999743 4999999999999999999999999999999999999999999999999998777778888999
Q ss_pred EEeccCccCcccHHHHHhcCCCCC--CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 456 LVSQEPALFATSIANNILLGKEDA--SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 456 ~v~Q~~~lf~~ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
|++|++.+|+.|++||+.++.... ..+++.+.++..++.+ ......+.+||||||||++||||++.+|
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNK----------EYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 999999999899999998764321 1223334444433321 1234556789999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 534 KILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999875 37999999999999875 899999999999999999998764
No 233
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=7.4e-42 Score=385.23 Aligned_cols=224 Identities=27% Similarity=0.473 Sum_probs=187.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH---HHh
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLR 1081 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~---~lR 1081 (1253)
-|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.. .+|
T Consensus 7 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 489999999996 34699999999999999999999999999999999999999999999999998876643 357
Q ss_pred cceEEEccCCCcccc-cHHHHhccCCC---CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1082 RKIGLVQQEPALFST-TIYENIKYGNE---DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~g-TIreNl~~g~~---~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
++++|+||++.+|++ |++||+.++.. ..+. +.+.++++..++.+. ......+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHH
Confidence 889999999999986 99999976421 1122 223334444444332 2333467999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999866 9999999999999999999998
Q ss_pred hcccchHHHHHH
Q 000851 1231 RKENGIYKQLIR 1242 (1253)
Q Consensus 1231 ~~~~g~y~~L~~ 1242 (1253)
+.....++.++.
T Consensus 233 ~~~~~~~~~~~~ 244 (269)
T PRK11831 233 ANPDPRVRQFLD 244 (269)
T ss_pred cCCcHHHHHHHH
Confidence 744444555654
No 234
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=383.45 Aligned_cols=221 Identities=32% Similarity=0.524 Sum_probs=188.2
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCC--CC
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LN 1076 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~--i~ 1076 (1253)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 35999999999963 469999999999999999999999999999999999998 689999999999863 56
Q ss_pred HHHHhcceEEEccCCCcccccHHHHhccCCCC--C---CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1077 LRSLRRKIGLVQQEPALFSTTIYENIKYGNED--A---SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1077 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~--~---~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
...+|++++||||++.+|+.|++||+.++... . .++++.++++.+++... ++........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDE-------CKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcch-------hhhhhCCCcccCCHHHHH
Confidence 67789999999999999999999999875321 1 12345555666655332 223344455789999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeC-----------CE
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQ-----------GK 1219 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~-----------G~ 1219 (1253)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999998778899999999999865 999999996 67
Q ss_pred EEEecChhHHhhccc
Q 000851 1220 VAEIGSHEQLLRKEN 1234 (1253)
Q Consensus 1220 ive~Gt~~eLl~~~~ 1234 (1253)
++|.|++++++..+.
T Consensus 242 ~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 242 LVEFNETKKIFNSPK 256 (269)
T ss_pred EEEeCCHHHHHhCcC
Confidence 999999999986443
No 235
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-42 Score=389.30 Aligned_cols=217 Identities=29% Similarity=0.464 Sum_probs=182.4
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCC---------
Q 000851 1006 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT--------- 1074 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~--------- 1074 (1253)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 88999999997432 2369999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CCHHHHhcceEEEccCC--CcccccHHHHhccCCC--CCCHH----HHHHHHHHhcHHHHHHhCC
Q 000851 1075 ---------------LNLRSLRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEI----ELMKATKAANAHGFISRMP 1131 (1253)
Q Consensus 1075 ---------------i~~~~lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d~----ei~~al~~a~l~~~I~~lp 1131 (1253)
.+...+|++||||||+| .+|..|++|||.++.. ..+.+ ++.++++.+++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------ 156 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDE------ 156 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh------
Confidence 13457889999999986 6888999999987632 22332 3444555554421
Q ss_pred CCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhh-cc
Q 000851 1132 EGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NA 1209 (1253)
Q Consensus 1132 ~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~ 1209 (1253)
........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +|+|||+|||+++.+. .|
T Consensus 157 ----~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~a 232 (305)
T PRK13651 157 ----SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWT 232 (305)
T ss_pred ----hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhC
Confidence 12334557899999999999999999999999999999999999999999999874 4899999999999875 59
Q ss_pred CEEEEEeCCEEEEecChhHHhhc
Q 000851 1210 DKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1210 D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
|||++|++|++++.|+++++.+.
T Consensus 233 drv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 233 KRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999998764
No 236
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-42 Score=372.70 Aligned_cols=203 Identities=29% Similarity=0.494 Sum_probs=177.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++||+++|+. .++|+|+||+|++| ++||+||||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 579999999963 36999999999999 99999999999999999999999999999999999998766 67899999
Q ss_pred EEccCCCcccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|+||+|.+|.+ |++||+.+... ..+ ++++.++++..++.++.+ + ...+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-------K----KIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-------C----chhhCCHHHHHHHHHHHH
Confidence 99999999986 99999976311 111 234566677777655432 2 235799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEec
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1224 (1253)
|+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998777999999999999965 9999999999999865
No 237
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-42 Score=388.33 Aligned_cols=216 Identities=28% Similarity=0.508 Sum_probs=182.7
Q ss_pred EEEEEEEEECCCCC---CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCC----CCHHH
Q 000851 377 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS----LQLKW 449 (1253)
Q Consensus 377 i~~~~v~f~y~~~~---~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~ 449 (1253)
|+++||+|+|+... ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997432 249999999999999999999999999999999999999999999999999863 33567
Q ss_pred HhcccEEEeccC--ccCcccHHHHHhcCCCC--CCHHH----HHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 450 LREQMGLVSQEP--ALFATSIANNILLGKED--ASMDR----VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 450 ~r~~i~~v~Q~~--~lf~~ti~~ni~~g~~~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
+|+.||||+|+| .+|..|+.||+.|+... .+.++ +.++++..++. +........+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~----------~~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLA----------DEFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCC----------hhhccCCcccCCHHHHH
Confidence 888999999998 78889999999987532 22222 33333333331 11234556789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l 599 (1253)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999875 4899999999999885 5999999999999999999988
Q ss_pred hhc
Q 000851 600 ISK 602 (1253)
Q Consensus 600 ~~~ 602 (1253)
..+
T Consensus 232 ~~~ 234 (288)
T PRK13643 232 FQE 234 (288)
T ss_pred HcC
Confidence 653
No 238
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.1e-41 Score=377.09 Aligned_cols=216 Identities=31% Similarity=0.553 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
++++|++++|+ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 78999999996 346999999999999999999999999999999999999999999999999998766544 46899
Q ss_pred EEccCCCc-ccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000851 1086 LVQQEPAL-FSTTIYENIKYGNE--DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 1162 (1253)
Q Consensus 1086 ~V~Qdp~L-f~gTIreNl~~g~~--~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~ 1162 (1253)
|+||++.+ +..|+++|+.++.. ..+.++.. ..+.++++.+ |++........+||||||||++|||||+++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 46799999986432 12222111 1123334433 444445566678999999999999999999
Q ss_pred CCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhhc
Q 000851 1163 PSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1163 p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999875 37899999999999988999999999999999999999863
No 239
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-42 Score=378.11 Aligned_cols=210 Identities=29% Similarity=0.476 Sum_probs=178.1
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---H
Q 000851 1005 NIELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS---L 1080 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~---l 1080 (1253)
.++++||+++|+.+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||.++..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999997422 246999999999999999999999999999999999999999999999999998887654 3
Q ss_pred h-cceEEEccCCCcccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000851 1081 R-RKIGLVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1081 R-~~i~~V~Qdp~Lf~g-TIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQr 1152 (1253)
| ++++|+||++.+|+. |++||+.++.. ..+ ++++.++++..++ +........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGL-----------EHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------chhhhCChhhCCHHHHHH
Confidence 3 689999999999875 99999986311 111 2234445554444 333344456899999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhccCEEEEEeCCEEEEecC
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGS 1225 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt 1225 (1253)
++||||++.+|+||||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+..+|++++|++|++++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4799999999999999899999999999998775
No 240
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-42 Score=367.54 Aligned_cols=217 Identities=32% Similarity=0.577 Sum_probs=189.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCc---cCCCCCHHHHh
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGY---DIRTLNLRSLR 1081 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~---di~~i~~~~lR 1081 (1253)
.|+++|++..|+ ..++++||||+|+.||.+|+.||||||||||+++|.|+..|++|.|.+||. |.++.+ .-.
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 378899999986 456899999999999999999999999999999999999999999999999 776633 334
Q ss_pred cceEEEccCCCccc-ccHHHHhccCCC----C----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000851 1082 RKIGLVQQEPALFS-TTIYENIKYGNE----D----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~----~----~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQr 1152 (1253)
++||+|+|+..||. .||++||+||.+ . .....+.+.++.+++..+-++-| .+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHH
Confidence 78999999999986 699999999962 1 12345566677777776666655 6899999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
+||||||..+|++||||||.++||+.-.+.+.+-|++... +.|++.|||+.+++.. ||||+||++|+|...|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999998753 8999999999998855 999999999999999999999
Q ss_pred hhcccchH
Q 000851 1230 LRKENGIY 1237 (1253)
Q Consensus 1230 l~~~~g~y 1237 (1253)
...+++.|
T Consensus 226 ~~~P~s~f 233 (345)
T COG1118 226 YDHPASRF 233 (345)
T ss_pred hcCCCccc
Confidence 88777655
No 241
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-42 Score=383.91 Aligned_cols=222 Identities=31% Similarity=0.542 Sum_probs=187.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCCCC--HH
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRTLN--LR 1078 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~i~--~~ 1078 (1253)
=+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYG---SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEEC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 47899999996 3469999999999999999999999999999999999986 47999999999987653 34
Q ss_pred HHhcceEEEccCCCcccccHHHHhccCCC--C------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1079 SLRRKIGLVQQEPALFSTTIYENIKYGNE--D------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1079 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~------~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
.+|++++||||++.+|++|++||+.++.. . ..++++.++++..++.+++ .+.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHH
Confidence 67899999999999999999999986421 1 1123445556666554322 1234455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhcccchH
Q 000851 1230 LRKENGIY 1237 (1253)
Q Consensus 1230 l~~~~g~y 1237 (1253)
++.+...|
T Consensus 236 ~~~~~~~~ 243 (251)
T PRK14244 236 FKNPQSSK 243 (251)
T ss_pred hcCCCChH
Confidence 87554444
No 242
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-42 Score=379.63 Aligned_cols=212 Identities=36% Similarity=0.608 Sum_probs=180.8
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCC---HHHHhcc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ---LKWLREQ 453 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r~~ 453 (1253)
++++||+++|+++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999741 34999999999999999999999999999999999999999999999999998766 4567889
Q ss_pred cEEEeccCccCc-ccHHHHHhcCCCCC-----------C---HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChH
Q 000851 454 MGLVSQEPALFA-TSIANNILLGKEDA-----------S---MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGG 518 (1253)
Q Consensus 454 i~~v~Q~~~lf~-~ti~~ni~~g~~~~-----------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgG 518 (1253)
++|++|++.+|. .|++||+.++.... . .+++.++++.. |+.......+.+||||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV-----------GLLDKAYQRADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc-----------CChhhhCCCcccCCHH
Confidence 999999998887 59999998754210 1 11222333333 3444455667799999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeC
Q 000851 519 QKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGT 595 (1253)
Q Consensus 519 q~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~ 595 (1253)
||||++||||++.+|++||||||||+||+.+.+.+.+.|+++. .|+|+|++||+++.+. .||++++|++|++++.|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 228 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGP 228 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999999999999999999875 3799999999999998 589999999999999999
Q ss_pred cchhh
Q 000851 596 HVDLI 600 (1253)
Q Consensus 596 ~~~l~ 600 (1253)
++++.
T Consensus 229 ~~~~~ 233 (241)
T cd03256 229 PAELT 233 (241)
T ss_pred HHHhh
Confidence 88763
No 243
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=377.86 Aligned_cols=211 Identities=31% Similarity=0.521 Sum_probs=179.3
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
++++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .+++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999975 349999999999999999999999999999999999999999999999999875543 2568999
Q ss_pred EeccCccCc-ccHHHHHhcCCCCC------CH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 000851 457 VSQEPALFA-TSIANNILLGKEDA------SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 525 (1253)
Q Consensus 457 v~Q~~~lf~-~ti~~ni~~g~~~~------~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriai 525 (1253)
|+|+|.+|. .|++||+.++.... .. +++.++++..+ ++........+||||||||++|
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrl~l 147 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQ-----------LDWLADRYPAQLSGGQRQRVAL 147 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcC-----------ChhhhhcChhhCCHHHHHHHHH
Confidence 999999986 59999998864211 11 12333344443 3333444556899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 526 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 526 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||||+.+|++|||||||++||+++.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 148 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 9999999999999999999999999999999998853 7899999999998765 899999999999999999888654
No 244
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=8.4e-42 Score=374.28 Aligned_cols=211 Identities=24% Similarity=0.429 Sum_probs=178.3
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++||++.|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++|
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEEE
Confidence 578999999975223499999999999999999999999999999999999999999999999998654 3566788999
Q ss_pred EeccCccC-cccHHHHHhcCCC--CCCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALF-ATSIANNILLGKE--DASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf-~~ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
|+|++.+| ..|++||+.++.. .... +++.++++..++.+ .......+||||||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTD-----------KANKRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHH-----------HHhChhhhCCHHHHHHHHHHHHH
Confidence 99999988 4699999987421 1111 22334444443332 23344568999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchh
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 599 (1253)
+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999998778999999999999865 899999999999999988765
No 245
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=384.09 Aligned_cols=221 Identities=33% Similarity=0.541 Sum_probs=189.5
Q ss_pred cCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCC--C
Q 000851 1003 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--L 1075 (1253)
Q Consensus 1003 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~--i 1075 (1253)
.+.|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|+|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999963 4699999999999999999999999999999999999984 89999999999865 3
Q ss_pred CHHHHhcceEEEccCCCcccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChh
Q 000851 1076 NLRSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 1148 (1253)
Q Consensus 1076 ~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~-~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgG 1148 (1253)
+...+|++++|+||++.+|+.|++||+.++.. .. . ++++.++++.+++.+.+. +..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 45678999999999999999999999986521 11 1 233556666666544332 2345566789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChh
Q 000851 1149 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHE 1227 (1253)
Q Consensus 1149 QkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~ 1227 (1253)
||||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 9999999999999999999
Q ss_pred HHhhcc
Q 000851 1228 QLLRKE 1233 (1253)
Q Consensus 1228 eLl~~~ 1233 (1253)
++.+.+
T Consensus 253 ~~~~~~ 258 (272)
T PRK14236 253 TLFTSP 258 (272)
T ss_pred HHhcCC
Confidence 998643
No 246
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=8.9e-42 Score=398.83 Aligned_cols=221 Identities=25% Similarity=0.493 Sum_probs=192.1
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
-++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.++.+++...++++||
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 3889999999975 34999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEeccCcc-CcccHHHHHhcCCCCC----------CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 456 LVSQEPAL-FATSIANNILLGKEDA----------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 456 ~v~Q~~~l-f~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
||+|++.+ |+.|++||+.+++... ..+++.++++..++.++.. ....+||||||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~-----------~~~~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFAD-----------RPVTSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHH
Confidence 99999987 5679999999875211 1234566666666655443 334689999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|||||+++|++|||||||++||+.++..+++.|+++. +++|+|++||+++.+. .||++++|++|++++.|++++++..
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 9999999999999999999999999999999999985 5789999999999995 4899999999999999999998764
Q ss_pred CchHHHHH
Q 000851 603 GGEYAALV 610 (1253)
Q Consensus 603 ~~~y~~~~ 610 (1253)
....+.+
T Consensus 230 -~~l~~~~ 236 (402)
T PRK09536 230 -DTLRAAF 236 (402)
T ss_pred -HHHHHHh
Confidence 2344444
No 247
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-42 Score=374.20 Aligned_cols=209 Identities=27% Similarity=0.481 Sum_probs=179.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 4699999999999999999999999999999999999999999999999988653 356788999
Q ss_pred EEccCCCcccc-cHHHHhccCCC--CC----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFST-TIYENIKYGNE--DA----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~~--~~----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|+||++.+|+. |+++|+.++.. .. .++++.++++..++.++..+. ..+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRL-----------VKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999998875 99999976311 11 123456666666665544332 35799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHc-C-CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLM-E-GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~-~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
++.+|++|||||||++||+.+.+.+.+.|++.. + ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999999875 3 7899999999999866 999999999999999998774
No 248
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=381.43 Aligned_cols=222 Identities=30% Similarity=0.494 Sum_probs=187.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC--C---CccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD--P---ISGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~--p---~~G~I~idG~di~~--i~~ 1077 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999973 469999999999999999999999999999999999997 3 58999999999864 445
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCCC---CCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNED---ASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~---~~d~----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++|+||++.+|+.|++||+.++... .+++ ++.++++..++.+++. ......+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 6788999999999999999999999865211 1222 2334455555443321 223445678999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhcccch
Q 000851 1230 LRKENGI 1236 (1253)
Q Consensus 1230 l~~~~g~ 1236 (1253)
+++....
T Consensus 242 ~~~~~~~ 248 (259)
T PRK14274 242 FSNPDDQ 248 (259)
T ss_pred hhCCCCH
Confidence 7644433
No 249
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=385.21 Aligned_cols=213 Identities=34% Similarity=0.544 Sum_probs=186.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
++++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++++
T Consensus 4 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 789999999963 235999999999999999999999999999999999999999999999999998877788899999
Q ss_pred EEccCC--CcccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1086 LVQQEP--ALFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1086 ~V~Qdp--~Lf~gTIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
||+|+| .+|+.|++||+.++.. ..+. +.+.++++..++.++..+. ...||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRV-----------PHHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHHHHHHH
Confidence 999998 4788999999986421 1222 2355666666665554443 3579999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHHhh
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|+++++++
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 99999999999999999999999999999998753 789999999999985 599999999999999999999976
No 250
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=397.09 Aligned_cols=219 Identities=31% Similarity=0.538 Sum_probs=188.1
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcc
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 1083 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~ 1083 (1253)
..|+++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|++||.++...++ .|++
T Consensus 18 ~~l~l~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 3599999999996 3468999999999999999999999999999999999999999999999999987664 5789
Q ss_pred eEEEccCCCcccc-cHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1084 IGLVQQEPALFST-TIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~g-TIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
++||+|++.+|+. |++|||.++.. ..+. +++.++++..++.++.++ ...+||||||||+|||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-----------~~~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKR-----------KPHQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHH
Confidence 9999999999975 99999998632 1222 344555566665544433 3357999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhcc
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKE 1233 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~ 1233 (1253)
|||+++|++||||||||+||+.+.+.+.+.|++.. .+.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999998888764 37899999999998754 9999999999999999999999866
Q ss_pred cchHH
Q 000851 1234 NGIYK 1238 (1253)
Q Consensus 1234 ~g~y~ 1238 (1253)
...|.
T Consensus 242 ~~~~~ 246 (377)
T PRK11607 242 TTRYS 246 (377)
T ss_pred ccHHH
Confidence 65544
No 251
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=382.51 Aligned_cols=220 Identities=30% Similarity=0.491 Sum_probs=189.2
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCC--CC
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LN 1076 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~--i~ 1076 (1253)
..|+++||+++|+ +.++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 3699999999996 3469999999999999999999999999999999999997 579999999999864 34
Q ss_pred HHHHhcceEEEccCCCcccccHHHHhccCCCC---CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhH
Q 000851 1077 LRSLRRKIGLVQQEPALFSTTIYENIKYGNED---AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 1149 (1253)
Q Consensus 1077 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~---~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQ 1149 (1253)
...+|+.++||||++.+|+.|++||+.++... .+ ++++.++++..++.+++. ...+..+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 56789999999999999999999999875221 11 234555666666544332 33455667899999
Q ss_pred HHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhH
Q 000851 1150 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1228 (1253)
Q Consensus 1150 kQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~e 1228 (1253)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999855 99999999999999999999
Q ss_pred Hhhcc
Q 000851 1229 LLRKE 1233 (1253)
Q Consensus 1229 Ll~~~ 1233 (1253)
+.+.+
T Consensus 249 ~~~~~ 253 (267)
T PRK14237 249 IFTNP 253 (267)
T ss_pred HhcCC
Confidence 97643
No 252
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-41 Score=382.13 Aligned_cols=223 Identities=30% Similarity=0.505 Sum_probs=187.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCCCC--H
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTLN--L 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~i~--~ 1077 (1253)
.|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+ .
T Consensus 12 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 599999999996 34699999999999999999999999999999999999985 7999999999986532 4
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
..+|+.++|+||++.+|+.|++||+.++.. ..+. +++.++++.+++.+.+ +.........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHHH
Confidence 567889999999999999999999986421 1222 2344555555543221 12233445679999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999865 9999999999999999999998
Q ss_pred hcccchH
Q 000851 1231 RKENGIY 1237 (1253)
Q Consensus 1231 ~~~~g~y 1237 (1253)
+++...|
T Consensus 242 ~~~~~~~ 248 (258)
T PRK14268 242 HNPREKS 248 (258)
T ss_pred cCCCCHH
Confidence 6444433
No 253
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-42 Score=381.98 Aligned_cols=224 Identities=31% Similarity=0.495 Sum_probs=186.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~--i~~ 1077 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 469999999999999999999999999999999999997 479999999999864 344
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCCC--C-----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNED--A-----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~--~-----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|+.++|++|++.+|+.|++||+.++... . .++++.++++..+++... .........+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 5678899999999999999999999865311 1 122344455555543211 1122345578999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778899999999999866 999999999999999999999
Q ss_pred hhcccchHH
Q 000851 1230 LRKENGIYK 1238 (1253)
Q Consensus 1230 l~~~~g~y~ 1238 (1253)
...+...|.
T Consensus 234 ~~~~~~~~~ 242 (251)
T PRK14251 234 FIAPKKQIT 242 (251)
T ss_pred HhCCCCHHH
Confidence 764433343
No 254
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-42 Score=384.00 Aligned_cols=221 Identities=30% Similarity=0.459 Sum_probs=190.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5999999999963 4699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCCcccc-cHHHHhccCCC----------CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1085 GLVQQEPALFST-TIYENIKYGNE----------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~~----------~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
+|+||++.++.+ |++||+.++.. ...++++.++++.+++.+++.+.| .+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHH
Confidence 999999877664 99999987521 112345667777777765544332 47999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-C-CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-E-GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~-~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
+|||||+.+|+||||||||++||+.+.+.+.+.|++.. + ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999874 2 7899999999999865 9999999999999999999987
Q ss_pred hcccchHHHHH
Q 000851 1231 RKENGIYKQLI 1241 (1253)
Q Consensus 1231 ~~~~g~y~~L~ 1241 (1253)
+. ..+..++
T Consensus 237 ~~--~~~~~~~ 245 (265)
T PRK10575 237 RG--ETLEQIY 245 (265)
T ss_pred CH--HHHHHHh
Confidence 52 3344444
No 255
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=383.78 Aligned_cols=219 Identities=30% Similarity=0.509 Sum_probs=185.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~--i~~ 1077 (1253)
.|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 21 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 599999999996 3469999999999999999999999999999999999875 789999999999865 344
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC---CC----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE---DA----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~---~~----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++|+||++.+|++|++||+.++.. .. .++.+.++++..++.+.+ ....+....+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccCCHHHH
Confidence 567899999999999999999999986421 10 122344555555443211 1223455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999998865 999999999999999999999
Q ss_pred hhcc
Q 000851 1230 LRKE 1233 (1253)
Q Consensus 1230 l~~~ 1233 (1253)
..+.
T Consensus 251 ~~~~ 254 (268)
T PRK14248 251 FTSP 254 (268)
T ss_pred HhCC
Confidence 8643
No 256
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=380.22 Aligned_cols=219 Identities=29% Similarity=0.442 Sum_probs=185.5
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCC--CCH
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQL 447 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 447 (1253)
.-|+++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 6 AIIETENLNLFYTDF--KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred ceEEEeeeEEEeCCc--eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 359999999999743 499999999999999999999999999999999999997 49999999999853 345
Q ss_pred HHHhcccEEEeccCccCcccHHHHHhcCCCCC---C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHH
Q 000851 448 KWLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 520 (1253)
Q Consensus 448 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~ 520 (1253)
..+|+.|+|++|++.+|+.|++|||.++.... . .+++.++++..++.+.+ ++.+ ...+.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~----~~~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKL----NTNALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHH----hCCcccCCHHHH
Confidence 56788999999999999899999999864211 1 23344555555443222 2223 345678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchh
Q 000851 521 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 521 qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 599 (1253)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999999778999999999999865 899999999999999999998
Q ss_pred hhc
Q 000851 600 ISK 602 (1253)
Q Consensus 600 ~~~ 602 (1253)
.+.
T Consensus 237 ~~~ 239 (254)
T PRK14273 237 FFN 239 (254)
T ss_pred HhC
Confidence 754
No 257
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.2e-41 Score=378.96 Aligned_cols=211 Identities=34% Similarity=0.594 Sum_probs=179.2
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCH---HHHhcc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL---KWLREQ 453 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~~ 453 (1253)
|+++||+++|+. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~-~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPN-GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCC-CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 689999999972 2349999999999999999999999999999999999999999999999999876653 346788
Q ss_pred cEEEeccCccCc-ccHHHHHhcCCCCC-----------C---HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChH
Q 000851 454 MGLVSQEPALFA-TSIANNILLGKEDA-----------S---MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGG 518 (1253)
Q Consensus 454 i~~v~Q~~~lf~-~ti~~ni~~g~~~~-----------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgG 518 (1253)
++||+|++.+|. .|++||+.++.... . .+++.++++.. |++......+.+||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV-----------GLADKAYQRADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc-----------CcHhhhcCCcccCCHH
Confidence 999999999886 59999998764211 1 11223333333 4444445566799999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeC
Q 000851 519 QKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGT 595 (1253)
Q Consensus 519 q~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 595 (1253)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGA 229 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCC
Confidence 9999999999999999999999999999999999999999874 37899999999999855 89999999999999999
Q ss_pred cchh
Q 000851 596 HVDL 599 (1253)
Q Consensus 596 ~~~l 599 (1253)
++++
T Consensus 230 ~~~~ 233 (243)
T TIGR02315 230 PSEL 233 (243)
T ss_pred HHHh
Confidence 8886
No 258
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.4e-41 Score=378.95 Aligned_cols=217 Identities=31% Similarity=0.520 Sum_probs=184.7
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCC-----CcEEEECCeeCCCC--CHHH
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT-----SGKILLDGHDLKSL--QLKW 449 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~~--~~~~ 449 (1253)
++++||+++|++. .+|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++... +...
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999753 4999999999999999999999999999999999999998 99999999998753 4556
Q ss_pred HhcccEEEeccCccCcccHHHHHhcCCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 450 LREQMGLVSQEPALFATSIANNILLGKED---ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 450 ~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
+++.|+|++|++.+|+.|++||+.++... .+. +++.++++..++.+++. ........+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHHH
Confidence 78899999999999999999999875321 111 23444455554432221 23455667899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999998777899999999998865 89999999999999999988865
Q ss_pred c
Q 000851 602 K 602 (1253)
Q Consensus 602 ~ 602 (1253)
.
T Consensus 233 ~ 233 (247)
T TIGR00972 233 N 233 (247)
T ss_pred C
Confidence 3
No 259
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.4e-42 Score=371.98 Aligned_cols=199 Identities=30% Similarity=0.560 Sum_probs=173.3
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEE
Q 000851 1007 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGL 1086 (1253)
Q Consensus 1007 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1086 (1253)
+++||+++|+.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. ..+|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 468999999631 469999999999999999999999999999999999999999999999998854 457789999
Q ss_pred EccCC--CcccccHHHHhccCCCCC--CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000851 1087 VQQEP--ALFSTTIYENIKYGNEDA--SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 1162 (1253)
Q Consensus 1087 V~Qdp--~Lf~gTIreNl~~g~~~~--~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~ 1162 (1253)
+||+| .+|+.|++||+.++.+.. .++++.++++..++.++..+.| ..||||||||++|||||+++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99998 467899999998754322 2346777777777766544433 47999999999999999999
Q ss_pred CCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEE
Q 000851 1163 PSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVA 1221 (1253)
Q Consensus 1163 p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~iv 1221 (1253)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999873 57899999999999975 9999999999985
No 260
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=9e-42 Score=373.51 Aligned_cols=207 Identities=25% Similarity=0.488 Sum_probs=176.7
Q ss_pred EEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1006 IELRNVSFKYPVRPD-ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
|+++||+++|+.+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 269999999999999999999999999999999999999999999999999875 456778999
Q ss_pred EEEccCCCcccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
+|+||+|.+|++ |++||+.+... ..+ .+++.++++..++.+.. .....+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELL-----------DRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hhhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975321 111 23445555555554433 3445689999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEec
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1224 (1253)
||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999875 48999999999999865 9999999999998865
No 261
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=385.38 Aligned_cols=217 Identities=31% Similarity=0.528 Sum_probs=188.8
Q ss_pred cEEEEeEEEECCCCC---CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC-HHHH
Q 000851 1005 NIELRNVSFKYPVRP---DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN-LRSL 1080 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~---~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~-~~~l 1080 (1253)
-|+++|++++|++.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999987654 3567
Q ss_pred hcceEEEccCCC--cccccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000851 1081 RRKIGLVQQEPA--LFSTTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1081 R~~i~~V~Qdp~--Lf~gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQr 1152 (1253)
|++++|+||+|. +|..|+.+|+.++.. ..+ ++++.++++.+++.++..+.| .+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 677799999987531 112 345667777777766655543 5799999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHh
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
++|||||+++|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999874 388999999999999889999999999999999999997
Q ss_pred hc
Q 000851 1231 RK 1232 (1253)
Q Consensus 1231 ~~ 1232 (1253)
+.
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 63
No 262
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=383.67 Aligned_cols=215 Identities=33% Similarity=0.581 Sum_probs=186.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++|++++|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 48999999999632 34699999999999999999999999999999999999999999999999999887878899999
Q ss_pred EEEccCC--CcccccHHHHhccCCC--CCCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1085 GLVQQEP--ALFSTTIYENIKYGNE--DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1085 ~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d~----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
+|+||+| .++..|++||+.++.. ..+.+ .+.++++..++.++..+ ...+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDK-----------EPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------CcccCCHHHHHHHHHH
Confidence 9999998 4567899999987521 12222 24455555565554433 3468999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhh
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999999998753 489999999999988899999999999999999998876
No 263
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9.9e-42 Score=376.88 Aligned_cols=216 Identities=29% Similarity=0.463 Sum_probs=182.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-Hhcce
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRKI 1084 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~-lR~~i 1084 (1253)
|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .|+++
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 47899999996 346999999999999999999999999999999999999999999999999998877655 45789
Q ss_pred EEEccCCCcccc-cHHHHhccCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000851 1085 GLVQQEPALFST-TIYENIKYGNED--ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILK 1161 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~~~--~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr 1161 (1253)
+|+||++.+|++ |++||+.++.+. ...++.. ..+.++++.+ |++........+||||||||++|||||+.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 999999865321 1211111 1123334433 44444555667899999999999999999
Q ss_pred CCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1162 NPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1162 ~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999999875 47899999999988765 99999999999999999999865
No 264
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=379.84 Aligned_cols=224 Identities=33% Similarity=0.561 Sum_probs=188.5
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCC--CC
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--LN 1076 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~--i~ 1076 (1253)
|.|+++||+++|++ .++++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999973 4699999999999999999999999999999999999863 68999999999875 45
Q ss_pred HHHHhcceEEEccCCCcccccHHHHhccCCC--CC-----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhH
Q 000851 1077 LRSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 1149 (1253)
Q Consensus 1077 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~-----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQ 1149 (1253)
...+|++++|+||++.+|+.|+++|+.++.. .. .++++.++++.+++.+.+. ......+.+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHH
Confidence 5678999999999999999999999987521 11 1234455555555433222 22344567899999
Q ss_pred HHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhH
Q 000851 1150 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1228 (1253)
Q Consensus 1150 kQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~e 1228 (1253)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999998865 99999999999999999999
Q ss_pred HhhcccchH
Q 000851 1229 LLRKENGIY 1237 (1253)
Q Consensus 1229 Ll~~~~g~y 1237 (1253)
+.......+
T Consensus 232 ~~~~~~~~~ 240 (250)
T PRK14240 232 LFTNPKDKR 240 (250)
T ss_pred HHhCCCChH
Confidence 876444433
No 265
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-42 Score=373.12 Aligned_cols=203 Identities=35% Similarity=0.570 Sum_probs=172.0
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+. .++.++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 478999999975 349999999999999999999999999999999999999999999999999876543 4678999
Q ss_pred EeccCccCc-ccHHHHHhcCCCCC--CH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALFA-TSIANNILLGKEDA--SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf~-~ti~~ni~~g~~~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
|+|++.+|. .|++||+.++.... .. +++.++++..++.+ .......+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEG-----------LLNRYPHELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChh-----------hhhcChhhCCHHHHHHHHHHHHH
Confidence 999998886 59999998763211 11 23334444444433 34444568999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEee
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 594 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 594 (1253)
+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999875 37899999999998765 8999999999998765
No 266
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-42 Score=381.09 Aligned_cols=221 Identities=30% Similarity=0.522 Sum_probs=186.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhcc---CCC--CccEEEECCccCCCC--CH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRF---YDP--ISGTVLIDGYDIRTL--NL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~---~~p--~~G~I~idG~di~~i--~~ 1077 (1253)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4899999999963 4699999999999999999999999999999999997 454 589999999998754 34
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCCC--C-----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNED--A-----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~--~-----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++|+||++.+|+.|++||+.++... . .++++.++++..++.+++ ++.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEV-------KDKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcch-------hhhhhCCcccCCHHHH
Confidence 6788999999999999999999999864211 1 123345555555543332 2234456678999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999855 999999999999999999999
Q ss_pred hhcccc
Q 000851 1230 LRKENG 1235 (1253)
Q Consensus 1230 l~~~~g 1235 (1253)
.+.+..
T Consensus 233 ~~~~~~ 238 (250)
T PRK14245 233 FTNPEK 238 (250)
T ss_pred hcCCCC
Confidence 864433
No 267
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=386.78 Aligned_cols=219 Identities=32% Similarity=0.595 Sum_probs=185.7
Q ss_pred EEEEEEEEECCCCC---CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCC----CHHH
Q 000851 377 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL----QLKW 449 (1253)
Q Consensus 377 i~~~~v~f~y~~~~---~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~ 449 (1253)
|+++||+|+|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997422 2499999999999999999999999999999999999999999999999998653 3456
Q ss_pred HhcccEEEeccC--ccCcccHHHHHhcCCCC--CCHHHHHHHHHHhCcHHHHhcCCCCccc-cccCCCCCCChHHHHHHH
Q 000851 450 LREQMGLVSQEP--ALFATSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQT-QVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 450 ~r~~i~~v~Q~~--~lf~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~g~~g~~LSgGq~qria 524 (1253)
+|++||||+|+| .+|..|+.|||.++... .+.++..+. +.+.++.+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999997 68888999999987422 233332221 22334444 6653 445677899999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhhh
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
|||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999884 4799999999999985 589999999999999999988876
Q ss_pred c
Q 000851 602 K 602 (1253)
Q Consensus 602 ~ 602 (1253)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 268
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=381.09 Aligned_cols=218 Identities=29% Similarity=0.509 Sum_probs=186.1
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCC--CCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~ 448 (1253)
.|+++||+++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+..
T Consensus 6 ~l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGDF--QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECCe--eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 58999999999743 49999999999999999999999999999999999975 689999999999864 3455
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCC--C-C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKED--A-S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.+|+.|+|++|++.+|+.|++||+.++... . . .+++.++++..++.+++ .+..+..+.+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-------KDRLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHHHHH
Confidence 778899999999999989999999875311 1 1 23445555555554332 22345667799999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999865 8999999999999999998886
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 237 ~~ 238 (253)
T PRK14242 237 TR 238 (253)
T ss_pred cC
Confidence 54
No 269
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=9.3e-42 Score=370.41 Aligned_cols=203 Identities=27% Similarity=0.468 Sum_probs=178.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++||+++|+ +.++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... ..+|++++
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 47899999996 34699999999999999999999999999999999999999999999999998764 56788999
Q ss_pred EEccCCCccc-ccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000851 1086 LVQQEPALFS-TTIYENIKYGNE--DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 1162 (1253)
Q Consensus 1086 ~V~Qdp~Lf~-gTIreNl~~g~~--~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~ 1162 (1253)
||||++.+|+ .|++||+.++.. ..+++++.++++..++.+...+ ....||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKK-----------KVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhh-----------hHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998884 799999976521 2345667778888877665443 2357999999999999999999
Q ss_pred CCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEec
Q 000851 1163 PSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1163 p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1224 (1253)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999865 47899999999999865 9999999999999865
No 270
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.7e-41 Score=367.08 Aligned_cols=200 Identities=36% Similarity=0.583 Sum_probs=181.8
Q ss_pred EEEEeEEEECCCCCC--cccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcc
Q 000851 1006 IELRNVSFKYPVRPD--ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 1083 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~--~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~ 1083 (1253)
|+++||+++|++..+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 479999999974311 3699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000851 1084 IGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 1163 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p 1163 (1253)
|+|+||+|.+|++|++||+.++.. .++++..++++.+++.+++..+|.|+++.+++.+.+||||||||++|||||+.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998643 3456777888888999999999999999999999999999999999999999999
Q ss_pred CEEEEecccCCCChHHHHHHHH-HHHHHc-CCceEEEEccCchhhhccCEEEEEeCCE
Q 000851 1164 SILLLDEATSALDTASENLIQE-ALDKLM-EGRTTIMVAHRLSTIRNADKIAVLQQGK 1219 (1253)
Q Consensus 1164 ~ILlLDEaTS~LD~~te~~I~~-~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ 1219 (1253)
+++||||||++||+++.+.+.+ .+++.. +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999998887 456553 4789999999999998899999999985
No 271
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=386.32 Aligned_cols=216 Identities=29% Similarity=0.489 Sum_probs=182.3
Q ss_pred EEEEEEEEECCCCC---CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCC----CCHHH
Q 000851 377 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS----LQLKW 449 (1253)
Q Consensus 377 i~~~~v~f~y~~~~---~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~ 449 (1253)
++++|++|+|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997421 349999999999999999999999999999999999999999999999999863 34556
Q ss_pred HhcccEEEeccC--ccCcccHHHHHhcCCCC--CCHH----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 450 LREQMGLVSQEP--ALFATSIANNILLGKED--ASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 450 ~r~~i~~v~Q~~--~lf~~ti~~ni~~g~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.|+.||||+|+| .+|+.|++|||.++... .+.+ ++.++++..++.+ ......+.+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPE----------ELLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCh----------hhhhCCcccCCHHHHH
Confidence 788999999998 68888999999987432 2222 2333444443321 1234556789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcch
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVD 598 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 598 (1253)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+.++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998853 7899999999999864 89999999999999999988
Q ss_pred hhhc
Q 000851 599 LISK 602 (1253)
Q Consensus 599 l~~~ 602 (1253)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8654
No 272
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=380.54 Aligned_cols=219 Identities=32% Similarity=0.525 Sum_probs=185.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC--C---CccEEEECCccCCCC--CH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD--P---ISGTVLIDGYDIRTL--NL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~--p---~~G~I~idG~di~~i--~~ 1077 (1253)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999973 469999999999999999999999999999999999954 6 489999999998643 34
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC--C-C----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--D-A----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~-~----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++||||++.+|+.|++||+.++.. . . .++++.++++.+++.+.+. +..+....+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 1 1 1233445555555543222 233455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999998865 999999999999999999999
Q ss_pred hhcc
Q 000851 1230 LRKE 1233 (1253)
Q Consensus 1230 l~~~ 1233 (1253)
++.+
T Consensus 235 ~~~~ 238 (252)
T PRK14239 235 FMNP 238 (252)
T ss_pred HhCC
Confidence 8643
No 273
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=397.68 Aligned_cols=205 Identities=36% Similarity=0.591 Sum_probs=177.3
Q ss_pred ccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHH----hcceEEEccCCCccc-c
Q 000851 1022 TIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL----RRKIGLVQQEPALFS-T 1096 (1253)
Q Consensus 1022 ~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~l----R~~i~~V~Qdp~Lf~-g 1096 (1253)
++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+...+ |++++||+|++.+|+ .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998876554 468999999999997 5
Q ss_pred cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEec
Q 000851 1097 TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDE 1170 (1253)
Q Consensus 1097 TIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDE 1170 (1253)
|++||+.++.. ..+ ++++.++++..++.++..+.| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987521 111 234556666666655554433 5799999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhcccchH
Q 000851 1171 ATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKENGIY 1237 (1253)
Q Consensus 1171 aTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y 1237 (1253)
|||+||+.+.+.+++.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++...|
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999999999999874 47899999999999865 99999999999999999999987554444
No 274
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=8.3e-41 Score=375.84 Aligned_cols=241 Identities=27% Similarity=0.464 Sum_probs=203.9
Q ss_pred HHHHHHHhccCCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHc
Q 000851 347 ANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQR 426 (1253)
Q Consensus 347 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~ 426 (1253)
+.+.+++..+++.+ +..+.+...+.|+++|+++.. .++|+|+||+|++||+++|+||||||||||+++|+|
T Consensus 15 ~~~~~~~~~~~~~~-----~~~~~~~~~~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~G 85 (282)
T cd03291 15 EGFGELLEKAKQEN-----NDRKHSSDDNNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILG 85 (282)
T ss_pred HHHHHHHhcccccc-----cccccCCCCCeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 34556665544322 112223344679999999962 249999999999999999999999999999999999
Q ss_pred cCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccc
Q 000851 427 LYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQT 506 (1253)
Q Consensus 427 ~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 506 (1253)
+++|++|+|.++| .|+|++|++.+|+.|++||+.++... ...++.++++..++.+.+..+|.++++
T Consensus 86 l~~p~~G~I~i~g-------------~i~yv~q~~~l~~~tv~enl~~~~~~-~~~~~~~~l~~~~l~~~l~~~~~~~~~ 151 (282)
T cd03291 86 ELEPSEGKIKHSG-------------RISFSSQFSWIMPGTIKENIIFGVSY-DEYRYKSVVKACQLEEDITKFPEKDNT 151 (282)
T ss_pred CCCCCCcEEEECC-------------EEEEEeCcccccccCHHHHhhccccc-CHHHHHHHHHHhCCHHHHHhccccccc
Confidence 9999999999998 39999999999999999999987432 334556667777888999999999999
Q ss_pred cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHH-HHHcCCCeEEEEccCchhhhhcCEEEEE
Q 000851 507 QVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRAL-EKIMSNRTTIVVAHRLSTVRDVDTIMVL 585 (1253)
Q Consensus 507 ~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l-~~~~~~~t~i~itH~l~~~~~~d~i~vl 585 (1253)
.+++.+.+||||||||++|||||+.+|++|||||||++||+.+...+.+.+ +.+.+++|+|++||+++.+..||++++|
T Consensus 152 ~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l 231 (282)
T cd03291 152 VLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILIL 231 (282)
T ss_pred eecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999888754 5666689999999999999889999999
Q ss_pred eCCEEEEeeCcchhhhcCchHHHHH
Q 000851 586 KNGQVVESGTHVDLISKGGEYAALV 610 (1253)
Q Consensus 586 ~~G~i~~~g~~~~l~~~~~~y~~~~ 610 (1253)
++|++++.|+++++......|...+
T Consensus 232 ~~G~i~~~g~~~~~~~~~~~~~~~~ 256 (282)
T cd03291 232 HEGSSYFYGTFSELQSLRPDFSSKL 256 (282)
T ss_pred ECCEEEEECCHHHHHhcchHHHHHH
Confidence 9999999999999876555554433
No 275
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-41 Score=378.31 Aligned_cols=221 Identities=27% Similarity=0.447 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-Hhcce
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRKI 1084 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~-lR~~i 1084 (1253)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999973 46999999999999999999999999999999999999999999999999998877654 45679
Q ss_pred EEEccCCCcccc-cHHHHhccCCCCCCH--HH---HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1085 GLVQQEPALFST-TIYENIKYGNEDASE--IE---LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~~~~~d--~e---i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
+|+||++.+|++ |++||+.++...... .. .........+.++++.+ |++.........||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999986 999999875321000 00 00000111223333333 34444455667899999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998778999999999999975 99999999999999999999875
No 276
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-41 Score=375.10 Aligned_cols=214 Identities=36% Similarity=0.555 Sum_probs=181.1
Q ss_pred EEEEEEEEECCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH---HHh
Q 000851 377 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLR 451 (1253)
Q Consensus 377 i~~~~v~f~y~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r 451 (1253)
|+++|++++|+++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999997531 1599999999999999999999999999999999999999999999999999776543 347
Q ss_pred cccEEEeccCccCc-ccHHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 452 EQMGLVSQEPALFA-TSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 452 ~~i~~v~Q~~~lf~-~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
+.|+|++|++.+|. .|++||+.++... .. .+++.++++..+ ++........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVG-----------LEDKADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCC-----------ChhhhhcChhhCCHHHHHHHH
Confidence 78999999999997 5999999875321 11 123333444443 333444455789999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
||||++.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999865 89999999999999999887754
No 277
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=5.1e-42 Score=375.41 Aligned_cols=204 Identities=35% Similarity=0.499 Sum_probs=172.1
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH----H
Q 000851 1006 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS----L 1080 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~----l 1080 (1253)
|+++||+++|+... ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999997321 146999999999999999999999999999999999999999999999999998776432 4
Q ss_pred hcceEEEccCCCcccc-cHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1081 RRKIGLVQQEPALFST-TIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1081 R~~i~~V~Qdp~Lf~g-TIreNl~~g~~~--~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
|++++|+||++.+|.+ |++||+.++... .. ++++.++++..++ +........+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGL-----------GDRLNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCC-----------chhhhcChhhcCHHHHHHH
Confidence 6789999999999986 999999875321 11 1233444444444 3333444568999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhccCEEEEEeCCEE
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKV 1220 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~i 1220 (1253)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7899999999999888999999999974
No 278
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=386.32 Aligned_cols=216 Identities=25% Similarity=0.449 Sum_probs=181.0
Q ss_pred EEEEEEEEECCCCC---CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCC---------
Q 000851 377 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS--------- 444 (1253)
Q Consensus 377 i~~~~v~f~y~~~~---~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--------- 444 (1253)
|+++||+|+|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999997532 249999999999999999999999999999999999999999999999987632
Q ss_pred ---------------CCHHHHhcccEEEeccC--ccCcccHHHHHhcCCCC--CCHHH----HHHHHHHhCcHHHHhcCC
Q 000851 445 ---------------LQLKWLREQMGLVSQEP--ALFATSIANNILLGKED--ASMDR----VIEAAKAANAHSFVEGLP 501 (1253)
Q Consensus 445 ---------------~~~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~g~~~--~~~~~----~~~~~~~~~~~~~i~~l~ 501 (1253)
.+...+|+.||||+|+| .+|..|++|||.|+... .+.++ +.++++..++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~------- 155 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLD------- 155 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCC-------
Confidence 13456788999999986 67888999999987432 22222 33344433332
Q ss_pred CCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhh-hc
Q 000851 502 DGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVR-DV 579 (1253)
Q Consensus 502 ~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~ 579 (1253)
.........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+. .|
T Consensus 156 ---~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~a 232 (305)
T PRK13651 156 ---ESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWT 232 (305)
T ss_pred ---hhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhC
Confidence 023445667999999999999999999999999999999999999999999999875 4899999999999875 59
Q ss_pred CEEEEEeCCEEEEeeCcchhhhc
Q 000851 580 DTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 580 d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|+|++|++|++++.|+.+++.+.
T Consensus 233 drv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 233 KRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999888654
No 279
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=379.82 Aligned_cols=220 Identities=32% Similarity=0.530 Sum_probs=187.8
Q ss_pred CCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCC--CC
Q 000851 374 AGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQ 446 (1253)
Q Consensus 374 ~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 446 (1253)
.+.|+++|++++|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGKF--HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCCe--EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 3569999999999743 49999999999999999999999999999999999986 589999999999853 45
Q ss_pred HHHHhcccEEEeccCccCcccHHHHHhcCCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHH
Q 000851 447 LKWLREQMGLVSQEPALFATSIANNILLGKED---ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 519 (1253)
Q Consensus 447 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 519 (1253)
...+|++|+|++|++.+|+.|++||+.++... .+. +++.++++..++.+. +....++...+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNE-------VKDKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChh-------hHHHHhcCCCCCCHHH
Confidence 56788899999999999999999999876321 122 334455555544322 2234556778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcch
Q 000851 520 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVD 598 (1253)
Q Consensus 520 ~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 598 (1253)
|||++||||++.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778899999999999865 89999999999999999988
Q ss_pred hhhc
Q 000851 599 LISK 602 (1253)
Q Consensus 599 l~~~ 602 (1253)
+...
T Consensus 242 ~~~~ 245 (260)
T PRK10744 242 IFTK 245 (260)
T ss_pred HHhC
Confidence 8654
No 280
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=379.95 Aligned_cols=227 Identities=31% Similarity=0.516 Sum_probs=190.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCCC--CH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTL--NL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~i--~~ 1077 (1253)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 3899999999963 4699999999999999999999999999999999999984 899999999998753 34
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC---CC----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE---DA----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~---~~----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++|+||+|.+|+.|++||+.++.. .. .++++.++++..++.+.+. ...+....+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVK-------SELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhH-------HHHhCChhhcCHHHH
Confidence 567889999999999999999999986421 11 1233555666666543332 223455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998755 999999999999999999999
Q ss_pred hhcccchHHHHH
Q 000851 1230 LRKENGIYKQLI 1241 (1253)
Q Consensus 1230 l~~~~g~y~~L~ 1241 (1253)
.+.....|...+
T Consensus 233 ~~~~~~~~~~~~ 244 (250)
T PRK14262 233 VERPKNKLTEEY 244 (250)
T ss_pred HhCCCChHHHHH
Confidence 864433354443
No 281
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.3e-41 Score=388.54 Aligned_cols=213 Identities=27% Similarity=0.502 Sum_probs=182.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+ +..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++|
T Consensus 7 ~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 599999999996 346999999999999999999999999999999999999999999999999997654 4578999
Q ss_pred EEEccCCCccc-ccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFS-TTIYENIKYGNE--DASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~-gTIreNl~~g~~--~~~d~e----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
|||||++.+|. .|++||+.+... ..+..+ +.++++..+ +++..++++ .+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAK-------LENKADAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchHhcCch----hhCCHHHHHHHHHHH
Confidence 99999999886 699999985321 122222 223333333 333445555 469999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
||+.+|++|||||||++||+.+.+.+++.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999975 47899999999999966 999999999999999999999763
No 282
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.8e-41 Score=379.16 Aligned_cols=218 Identities=34% Similarity=0.550 Sum_probs=182.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC--------H
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN--------L 1077 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~--------~ 1077 (1253)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 899999999973 46999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcceEEEccCCCccc-ccHHHHhccCC---CCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1078 RSLRRKIGLVQQEPALFS-TTIYENIKYGN---EDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~---~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
..+|++++||||++.+|+ .|++||+.++. .....++..+. +.+.++.+ |++........+||||||||+
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv 153 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATAR-----ARELLAKV--GLAGKETSYPRRLSGGQQQRV 153 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCcchhhCChhhCChHHHHHH
Confidence 567889999999999886 69999997641 11122221111 12233332 343334456678999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
+|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999875 48899999999999966 99999999999999999999876
Q ss_pred cc
Q 000851 1232 KE 1233 (1253)
Q Consensus 1232 ~~ 1233 (1253)
..
T Consensus 234 ~~ 235 (250)
T PRK11264 234 DP 235 (250)
T ss_pred CC
Confidence 43
No 283
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=382.38 Aligned_cols=213 Identities=33% Similarity=0.563 Sum_probs=184.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC-HHHHhcce
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN-LRSLRRKI 1084 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~-~~~lR~~i 1084 (1253)
++++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+++++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 345999999999999999999999999999999999999999999999999998765 46788899
Q ss_pred EEEccCCC--cccccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1085 GLVQQEPA--LFSTTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1085 ~~V~Qdp~--Lf~gTIreNl~~g~~~--~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
+|+||+|. +++.|++|||.++... .+ ++++.++++..++.++.. .....||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRH-----------RSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhc-----------CCcccCCHHHHHHHHHH
Confidence 99999985 6778999999875321 22 233445555555544433 33467999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhh
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||+.+|+||||||||++||+.+...+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999865 4899999999999998899999999999999999999875
No 284
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=379.60 Aligned_cols=218 Identities=32% Similarity=0.512 Sum_probs=184.3
Q ss_pred cCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCC-------
Q 000851 1003 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL------- 1075 (1253)
Q Consensus 1003 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i------- 1075 (1253)
.+.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 3 ~~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (257)
T PRK10619 3 ENKLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQL 79 (257)
T ss_pred CccEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccc
Confidence 35699999999997 34699999999999999999999999999999999999999999999999988642
Q ss_pred ------CHHHHhcceEEEccCCCccc-ccHHHHhccCC---CCCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCC
Q 000851 1076 ------NLRSLRRKIGLVQQEPALFS-TTIYENIKYGN---EDAS----EIELMKATKAANAHGFISRMPEGYQSHVGDR 1141 (1253)
Q Consensus 1076 ------~~~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~---~~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~ 1141 (1253)
....+|++++||||++.+|+ .|++||+.++. .... ++++.++++..++.++. ....
T Consensus 80 ~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~ 149 (257)
T PRK10619 80 KVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKY 149 (257)
T ss_pred ccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCC
Confidence 13467889999999999997 49999997632 1112 22344445544443322 1344
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCE
Q 000851 1142 GVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGK 1219 (1253)
Q Consensus 1142 G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ 1219 (1253)
...||||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 57899999999999999999999999999999999999999999999875 48999999999999986 99999999999
Q ss_pred EEEecChhHHhhcc
Q 000851 1220 VAEIGSHEQLLRKE 1233 (1253)
Q Consensus 1220 ive~Gt~~eLl~~~ 1233 (1253)
+++.|+++++.+..
T Consensus 230 i~~~~~~~~~~~~~ 243 (257)
T PRK10619 230 IEEEGAPEQLFGNP 243 (257)
T ss_pred EEEeCCHHHhhhCc
Confidence 99999999997643
No 285
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=379.90 Aligned_cols=221 Identities=28% Similarity=0.480 Sum_probs=190.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++..++...+++.++
T Consensus 3 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 78999999996 346999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccCCCcccc-cHHHHhccCCCC----------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000851 1086 LVQQEPALFST-TIYENIKYGNED----------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~~~----------~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrla 1154 (1253)
|+||++.+|.+ |++||+.++... ..++++.++++..++.++.. .....||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLAD-----------RRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHc-----------CCcccCCHHHHHHHH
Confidence 99999998876 999999875211 11234555666666554433 334679999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
||||++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~- 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT- 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC-
Confidence 9999999999999999999999999999999999865 47899999999999865 99999999999999999999875
Q ss_pred ccchHHHHHH
Q 000851 1233 ENGIYKQLIR 1242 (1253)
Q Consensus 1233 ~~g~y~~L~~ 1242 (1253)
...+.+.+.
T Consensus 228 -~~~~~~~~~ 236 (255)
T PRK11231 228 -PGLLRTVFD 236 (255)
T ss_pred -HHHHHHHhC
Confidence 244555553
No 286
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.1e-41 Score=373.95 Aligned_cols=216 Identities=26% Similarity=0.441 Sum_probs=179.4
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHH-hcccE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL-REQMG 455 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i~ 455 (1253)
|+++||+++|++. ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.... +++++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGKS--QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCCe--eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 5789999999743 49999999999999999999999999999999999999999999999999987776544 66799
Q ss_pred EEeccCccCcc-cHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000851 456 LVSQEPALFAT-SIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPK 534 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ 534 (1253)
|++|++.+|.. |++||+.++.......+..+. ...+.+.+.. ++......+.+||||||||++||||++.+|+
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~--~~~~l~~~~~----l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 152 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKAR--LERVYELFPR----LKERRKQLAGTLSGGEQQMLAIARALMSRPK 152 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHH--HHHHHHHHHh----hhhhhhCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999986 999999886533211111111 1111122212 2333445667899999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 535 ILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 535 ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
+|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 153 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 153 LLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 999999999999999999999999875 57899999999998765 8999999999999999887764
No 287
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-41 Score=377.96 Aligned_cols=224 Identities=29% Similarity=0.498 Sum_probs=188.1
Q ss_pred cCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC--C---CccEEEECCccCCCC--
Q 000851 1003 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD--P---ISGTVLIDGYDIRTL-- 1075 (1253)
Q Consensus 1003 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~--p---~~G~I~idG~di~~i-- 1075 (1253)
++.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 356999999999963 469999999999999999999999999999999999986 4 689999999998653
Q ss_pred CHHHHhcceEEEccCCCccc-ccHHHHhccCCC--C-CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000851 1076 NLRSLRRKIGLVQQEPALFS-TTIYENIKYGNE--D-AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSG 1147 (1253)
Q Consensus 1076 ~~~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~-~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSg 1147 (1253)
+...+|++++|+||++.+|. .|++||+.++.. . .+ ++++.++++..++.+++.. ..+..+.+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKD-------RLKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcCcCCH
Confidence 34577899999999999998 599999986421 1 11 2334555556655443321 23345678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecCh
Q 000851 1148 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSH 1226 (1253)
Q Consensus 1148 GQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~ 1226 (1253)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998778899999999999855 999999999999999999
Q ss_pred hHHhhcccch
Q 000851 1227 EQLLRKENGI 1236 (1253)
Q Consensus 1227 ~eLl~~~~g~ 1236 (1253)
+++...+...
T Consensus 232 ~~~~~~~~~~ 241 (252)
T PRK14256 232 KKIFTTPEKK 241 (252)
T ss_pred HHHHhCCCcH
Confidence 9998654433
No 288
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-41 Score=396.09 Aligned_cols=212 Identities=31% Similarity=0.513 Sum_probs=182.6
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+.. +++|+
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999974 3499999999999999999999999999999999999999999999999999876543 46799
Q ss_pred EEeccCccCcc-cHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 456 LVSQEPALFAT-SIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
||+|++.+|.. |++||+.|+... .+. +++.++++..++.++. .....+||||||||++||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-----------~~~~~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLL-----------DRKPKALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------cCChhhCCHHHHHHHHHHHH
Confidence 99999999965 999999987431 121 2344555555544433 34456899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|+.+|++||||||||+||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999998865 899999999999999999988754
No 289
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.1e-41 Score=371.31 Aligned_cols=203 Identities=34% Similarity=0.616 Sum_probs=174.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999973 4699999999999999999999999999999999999999999999999998766543 57899
Q ss_pred EEccCCCccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~-gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|+||++.+|. .|++||+.++.. ..+ ++++.++++..++.++... ...+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDR-----------KPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhC-----------ChhhCCHHHHHHHHHHHH
Confidence 9999999885 699999987521 112 2234455566655544433 346799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEec
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1224 (1253)
|+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999875 37899999999999876 9999999999999876
No 290
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-41 Score=382.71 Aligned_cols=215 Identities=31% Similarity=0.524 Sum_probs=188.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCc---cEEEECCccCCCCCHHHHh
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPIS---GTVLIDGYDIRTLNLRSLR 1081 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~---G~I~idG~di~~i~~~~lR 1081 (1253)
.|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+|
T Consensus 5 ~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 5 IVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred eEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 58999999999732 2469999999999999999999999999999999999999987 8999999999887777889
Q ss_pred cceEEEccCC--CcccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1082 RKIGLVQQEP--ALFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1082 ~~i~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
++++||||+| .+++.|++|||.++.. ..+. +++.++++..++.++..+.| .+||||||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHH
Confidence 9999999998 4678899999987532 2233 33556677777665554433 68999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhh
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
+|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|++++++.
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998753 789999999999998899999999999999999998875
No 291
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-41 Score=388.20 Aligned_cols=227 Identities=29% Similarity=0.477 Sum_probs=188.5
Q ss_pred cEEEEeEEEECCCCC-------CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCH
Q 000851 1005 NIELRNVSFKYPVRP-------DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~-------~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~ 1077 (1253)
-|+++|++++|+.+. ..++|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999997421 2468999999999999999999999999999999999999999999999999988875
Q ss_pred H---HHhcceEEEccCCC--ccc-ccHHHHhccC---CCCCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCC
Q 000851 1078 R---SLRRKIGLVQQEPA--LFS-TTIYENIKYG---NEDAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQ 1144 (1253)
Q Consensus 1078 ~---~lR~~i~~V~Qdp~--Lf~-gTIreNl~~g---~~~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~ 1144 (1253)
. .+|++|+||+|+|. |++ -|+.+|+... ..... .+.+.++++.+++.+ ..++. ...+
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~----~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDR----YPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcC----CCcc
Confidence 3 56889999999994 555 4898888532 11112 234555666665532 12233 3467
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEE
Q 000851 1145 LSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVA 1221 (1253)
Q Consensus 1145 LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~iv 1221 (1253)
||||||||++|||||+.+|++||+||||++||..+.+.|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 8899999999999975 9999999999999
Q ss_pred EecChhHHhhcccchHHHHH
Q 000851 1222 EIGSHEQLLRKENGIYKQLI 1241 (1253)
Q Consensus 1222 e~Gt~~eLl~~~~g~y~~L~ 1241 (1253)
|.|+++++++++...|.+.+
T Consensus 235 e~g~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQAL 254 (327)
T ss_pred EECCHHHHhcCCCCHHHHHH
Confidence 99999999986555566543
No 292
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.1e-41 Score=376.04 Aligned_cols=213 Identities=32% Similarity=0.545 Sum_probs=181.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC--HHHHhcc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN--LRSLRRK 1083 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~--~~~lR~~ 1083 (1253)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 789999999963 46999999999999999999999999999999999999999999999999987643 4567889
Q ss_pred eEEEccCCCccc-ccHHHHhccCCC---CCCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1084 IGLVQQEPALFS-TTIYENIKYGNE---DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~-gTIreNl~~g~~---~~~d~----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
++|+||++.+|. .|+++|+.++.. ..+.+ ++.++++.. |++.........||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKV-----------GLAERAHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHc-----------CChHHHhcChhhcCHHHHHHHHH
Confidence 999999999886 599999987421 11222 233333333 34433444557899999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999999999875 47999999999999965 999999999999999999998763
No 293
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-41 Score=368.26 Aligned_cols=199 Identities=31% Similarity=0.531 Sum_probs=171.5
Q ss_pred EEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEE
Q 000851 378 EFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLV 457 (1253)
Q Consensus 378 ~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 457 (1253)
+++|++++|++. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++|+|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 368999999752 349999999999999999999999999999999999999999999999998753 4567789999
Q ss_pred eccC--ccCcccHHHHHhcCCCCC--CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 458 SQEP--ALFATSIANNILLGKEDA--SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 458 ~Q~~--~lf~~ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
+|++ .++..|++||+.++.+.. ..+++.++++..++.++..+. ..+||||||||++||||++.+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERH-----------PLSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCC-----------chhCCHHHHHHHHHHHHHHhCC
Confidence 9998 467789999999864332 234566667766665554443 3589999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHH-cCCCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 000851 534 KILLLDEATSALDAESELIVQRALEKI-MSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVV 591 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~~l~~~-~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~ 591 (1253)
++|||||||++||+.+.+.+.+.|+++ .+++|+|++||+++.+.. ||++++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999999999999999987 457899999999999875 8999999999975
No 294
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=376.25 Aligned_cols=212 Identities=30% Similarity=0.474 Sum_probs=179.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCC------CCCHHH
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIR------TLNLRS 1079 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~------~i~~~~ 1079 (1253)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 46999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhcceEEEccCCCcccc-cHHHHhccCC---CCCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1080 LRRKIGLVQQEPALFST-TIYENIKYGN---EDASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1080 lR~~i~~V~Qdp~Lf~g-TIreNl~~g~---~~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
+|++++|+||++.+|++ |++||+.++. ..... +++.+.++..+ ++..+.....+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLR-----------LKPYADRFPLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------ChhhhhCChhhCCHHHHH
Confidence 78899999999999975 9999997421 11122 22333344443 333344445689999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999875 48999999999999865 999999999999999999987
Q ss_pred hh
Q 000851 1230 LR 1231 (1253)
Q Consensus 1230 l~ 1231 (1253)
.+
T Consensus 229 ~~ 230 (242)
T PRK11124 229 TQ 230 (242)
T ss_pred cC
Confidence 65
No 295
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-41 Score=376.65 Aligned_cols=218 Identities=30% Similarity=0.549 Sum_probs=186.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC-----ccEEEECCccCCCC--CH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI-----SGTVLIDGYDIRTL--NL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~-----~G~I~idG~di~~i--~~ 1077 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 46999999999999999999999999999999999999997 69999999998643 45
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~-~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|+.++||||+|.+|+.|++||+.++.. .. . ++.+.++++..++.+.+. ......+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 678999999999999999999999987531 11 1 123444455555543332 234556778999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988668999999999999876 899999999999999999998
Q ss_pred hhc
Q 000851 1230 LRK 1232 (1253)
Q Consensus 1230 l~~ 1232 (1253)
...
T Consensus 234 ~~~ 236 (251)
T PRK14249 234 FSR 236 (251)
T ss_pred HhC
Confidence 764
No 296
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-41 Score=374.06 Aligned_cols=218 Identities=26% Similarity=0.412 Sum_probs=181.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-Hhcc
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRK 1083 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~-lR~~ 1083 (1253)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|++
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 46999999999999999999999999999999999999999999999999998887654 6788
Q ss_pred eEEEccCCCcccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000851 1084 IGLVQQEPALFST-TIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 1162 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~g-TIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~ 1162 (1253)
++|+||++.+|++ |+++|+.++....+.++..+.+ .+.++.++. ++.........||||||||++|||||+++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~~-l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFPR-LHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHHH-HHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 9999998753222222222211 111222111 11112234567999999999999999999
Q ss_pred CCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1163 PSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1163 p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|+||||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999999875 48999999999998755 99999999999999999999975
No 297
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-41 Score=378.49 Aligned_cols=220 Identities=30% Similarity=0.493 Sum_probs=188.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~--i~~ 1077 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 469999999999999999999999999999999999986 479999999998853 455
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCCC--C---CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNED--A---SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~--~---~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQr 1152 (1253)
..+|++++|++|++.+|+.|++||+.++... . .++++.++++.+++.+++.. .....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 6788999999999999989999999875321 1 12345556677776554432 2344567899999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEe---------CCEEEE
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ---------QGKVAE 1222 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~---------~G~ive 1222 (1253)
++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999999865 99999998 899999
Q ss_pred ecChhHHhhccc
Q 000851 1223 IGSHEQLLRKEN 1234 (1253)
Q Consensus 1223 ~Gt~~eLl~~~~ 1234 (1253)
.|+++|+.+.+.
T Consensus 240 ~~~~~~~~~~~~ 251 (264)
T PRK14243 240 FDRTEKIFNSPQ 251 (264)
T ss_pred eCCHHHHHhCCC
Confidence 999999986443
No 298
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-41 Score=375.65 Aligned_cols=212 Identities=30% Similarity=0.467 Sum_probs=180.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-Hhcce
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRKI 1084 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~-lR~~i 1084 (1253)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999973 46999999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEccCCCcccc-cHHHHhccCCCCC--CHHH-HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000851 1085 GLVQQEPALFST-TIYENIKYGNEDA--SEIE-LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 1160 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~~~~--~d~e-i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALl 1160 (1253)
+|+||++.+|+. |+++|+.++.... ..++ ..++++..+ +++........+||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999986 9999998753221 1111 122222222 1223334455679999999999999999
Q ss_pred cCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1161 KNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1161 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999999998753 7899999999999986 9999999999999999999974
No 299
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-41 Score=377.70 Aligned_cols=227 Identities=30% Similarity=0.500 Sum_probs=190.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCCC--CH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTL--NL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~i--~~ 1077 (1253)
.|+++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYG---EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEEC---CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 489999999996 34699999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCCC--C-C----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNED--A-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~--~-~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
...|+.++|++|++.+|+.|++||+.++... . . ++.+.++++.+++.+. +.+..+..+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDE-------VKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchh-------hHHHhhcChhhCCHHHH
Confidence 6778899999999999999999999875321 1 1 2234445555544322 22335566778999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+.+|+++||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999999965 999999999999999999999
Q ss_pred hhcccchHHHHH
Q 000851 1230 LRKENGIYKQLI 1241 (1253)
Q Consensus 1230 l~~~~g~y~~L~ 1241 (1253)
.+++...+.+.+
T Consensus 236 ~~~~~~~~~~~~ 247 (253)
T PRK14261 236 FENPHEELTENY 247 (253)
T ss_pred HhCCCcHHHHHH
Confidence 864444455544
No 300
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-41 Score=380.49 Aligned_cols=218 Identities=30% Similarity=0.520 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 376 QIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
-|+++||+++|++.. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.+...+++.|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 489999999997432 3499999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEeccCc--cCcccHHHHHhcCCC--CCCHH----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 455 GLVSQEPA--LFATSIANNILLGKE--DASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 455 ~~v~Q~~~--lf~~ti~~ni~~g~~--~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
+||+|+|. ++..|+.|||.++.. ..+.+ ++.++++..++.++... ...+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 99999983 667899999987632 12222 34455566555554433 3468999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhcCc
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISKGG 604 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~ 604 (1253)
|||+++|++|||||||++||+.+.+.+.+.|.++.+ |+|+|++||+++.+..||+|++|++|++++.|++++++...+
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 232 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATSE 232 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHH
Confidence 999999999999999999999999999999998854 799999999999998899999999999999999999876533
No 301
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=373.22 Aligned_cols=205 Identities=35% Similarity=0.521 Sum_probs=174.4
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1006 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
|+++|++++|+... ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997311 1469999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEccCCCccc-ccHHHHhccCCC--CC----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFS-TTIYENIKYGNE--DA----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~-gTIreNl~~g~~--~~----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
+||||+|.+|+ .|++||+.++.. .. .++++.++++..++.++..+ ...+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENA-----------YPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------CcccCCHHHHHHHHHHH
Confidence 99999999987 699999986421 11 12345556666666544433 33579999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEe--CCEEEEecCh
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQ--QGKVAEIGSH 1226 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~--~G~ive~Gt~ 1226 (1253)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999874 37899999999998865 99999999 7999998764
No 302
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-41 Score=380.13 Aligned_cols=220 Identities=29% Similarity=0.503 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~--i~~ 1077 (1253)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999973 469999999999999999999999999999999999997 699999999999853 345
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC--CCCH-----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DASE-----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~~d-----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++|+||+|.+|..|++||+.++.. ..++ +.+.++++..++. +++.......+.+||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIW-------DELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc-------chHHHHHhcCcccCCHHHH
Confidence 677899999999999999999999986421 1221 1223333333322 1233334556678999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhccc
Q 000851 1230 LRKEN 1234 (1253)
Q Consensus 1230 l~~~~ 1234 (1253)
.+.+.
T Consensus 254 ~~~~~ 258 (271)
T PRK14238 254 FSNPS 258 (271)
T ss_pred HcCCC
Confidence 86443
No 303
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-41 Score=368.35 Aligned_cols=203 Identities=26% Similarity=0.489 Sum_probs=175.5
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++||+|+|+++ ++|+|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..+++.++|
T Consensus 1 i~~~~~~~~~~~~--~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGKK--RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECCE--EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 5789999999753 4999999999999 99999999999999999999999999999999999987766 667889999
Q ss_pred EeccCccCcc-cHHHHHhcCCC--CCC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALFAT-SIANNILLGKE--DAS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
++|++.+|.. |++||+.+... ... .+++.++++..++.++.+ ....+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHHHHH
Confidence 9999999976 99999986421 111 234555566665544432 33458999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEee
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 594 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 594 (1253)
+++|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998777999999999999865 8999999999998765
No 304
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.9e-41 Score=371.67 Aligned_cols=205 Identities=30% Similarity=0.498 Sum_probs=172.7
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---Hh
Q 000851 1006 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS---LR 1081 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~---lR 1081 (1253)
|+++||+++|+... ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999997321 246999999999999999999999999999999999999999999999999998877644 34
Q ss_pred -cceEEEccCCCccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1082 -RKIGLVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1082 -~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
++++||||++.+|+ .|++||+.++.. ..+ .+++.++++..++ +.........||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGL-----------EHRINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHHHHH
Confidence 68999999999986 599999986321 111 1233344444443 3333444568999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhccCEEEEEeCCEEE
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRNADKIAVLQQGKVA 1221 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~iv 1221 (1253)
+|||||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999875 378999999999999889999999999986
No 305
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-41 Score=372.83 Aligned_cols=209 Identities=29% Similarity=0.515 Sum_probs=177.5
Q ss_pred cEEEEEEEEECCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH---H
Q 000851 376 QIEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW---L 450 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~ 450 (1253)
-++++||+|+|+++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999997432 34999999999999999999999999999999999999999999999999998877543 3
Q ss_pred h-cccEEEeccCccCcc-cHHHHHhcCCC--CCCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 451 R-EQMGLVSQEPALFAT-SIANNILLGKE--DASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 451 r-~~i~~v~Q~~~lf~~-ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
| +.|+|++|++.+|+. |++||+.++.. .... +++.++++.. |++........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAV-----------GLEHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhhCChhhCCHHHHHH
Confidence 3 679999999998876 99999987421 1111 2233333333 44444555667899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeC
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGT 595 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 595 (1253)
++||||++.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4799999999999999899999999999998875
No 306
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-41 Score=371.47 Aligned_cols=203 Identities=34% Similarity=0.521 Sum_probs=171.8
Q ss_pred EEEEEEEEECCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH----HH
Q 000851 377 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK----WL 450 (1253)
Q Consensus 377 i~~~~v~f~y~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~----~~ 450 (1253)
|+++||+++|++.. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999997421 3499999999999999999999999999999999999999999999999998876532 24
Q ss_pred hcccEEEeccCccCcc-cHHHHHhcCCCCC--C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 000851 451 REQMGLVSQEPALFAT-SIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 523 (1253)
Q Consensus 451 r~~i~~v~Q~~~lf~~-ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qri 523 (1253)
+++++|++|++.+|.. |++||+.++.... . .+++.++++.. |++......+.+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERV-----------GLGDRLNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHc-----------CCchhhhcChhhcCHHHHHHH
Confidence 5789999999999976 9999998864321 1 12233333333 444444556678999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000851 524 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQV 590 (1253)
Q Consensus 524 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i 590 (1253)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999999854 7899999999999888999999999974
No 307
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-41 Score=380.13 Aligned_cols=220 Identities=30% Similarity=0.500 Sum_probs=187.1
Q ss_pred CCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCC--CC
Q 000851 374 AGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQ 446 (1253)
Q Consensus 374 ~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 446 (1253)
.+.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|+++|+++.. .+
T Consensus 17 ~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~ 94 (267)
T PRK14235 17 EIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLD 94 (267)
T ss_pred CceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccc
Confidence 457999999999974 3499999999999999999999999999999999999975 89999999999864 34
Q ss_pred HHHHhcccEEEeccCccCcccHHHHHhcCCC--CC--C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChH
Q 000851 447 LKWLREQMGLVSQEPALFATSIANNILLGKE--DA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGG 518 (1253)
Q Consensus 447 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgG 518 (1253)
...+|+.|+||+|++.+|+.|+.||+.++.. .. + .+++.++++..++.+++ ....+..+.+||||
T Consensus 95 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG 167 (267)
T PRK14235 95 VVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-------KDRLHEPGTGLSGG 167 (267)
T ss_pred hHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHH
Confidence 5667889999999999998899999987531 10 1 23344555555543322 12345567789999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcc
Q 000851 519 QKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHV 597 (1253)
Q Consensus 519 q~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 597 (1253)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 168 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 247 (267)
T PRK14235 168 QQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTE 247 (267)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778899999999999865 8999999999999999998
Q ss_pred hhhhc
Q 000851 598 DLISK 602 (1253)
Q Consensus 598 ~l~~~ 602 (1253)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14235 248 KMFTN 252 (267)
T ss_pred HHHhC
Confidence 88643
No 308
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-41 Score=381.15 Aligned_cols=220 Identities=29% Similarity=0.545 Sum_probs=186.9
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCC--CC
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRT--LN 1076 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~--i~ 1076 (1253)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 35999999999963 469999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhcceEEEccCCCcccccHHHHhccCCC-----CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1077 LRSLRRKIGLVQQEPALFSTTIYENIKYGNE-----DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1077 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-----~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
...+|++++||||++.+|+.|++||+.++.. ...++++.++++..++...+. ........+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVK-------DQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhH-------HHHhCCcccCCHHHHH
Confidence 5678899999999999999999999986421 112345666666666543322 1234455789999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEE-EEeCCEEEEecChhHH
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIA-VLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~-Vl~~G~ive~Gt~~eL 1229 (1253)
|++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 99975 5799999999999998
Q ss_pred hhcc
Q 000851 1230 LRKE 1233 (1253)
Q Consensus 1230 l~~~ 1233 (1253)
.++.
T Consensus 268 ~~~~ 271 (285)
T PRK14254 268 FENP 271 (285)
T ss_pred HhCc
Confidence 7643
No 309
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-41 Score=381.98 Aligned_cols=215 Identities=29% Similarity=0.502 Sum_probs=184.2
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCC--CCCHHHHhcc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK--SLQLKWLREQ 453 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~r~~ 453 (1253)
-|+++||+|+|++ ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+.
T Consensus 5 ~l~~~~l~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSD-GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 4899999999963 234999999999999999999999999999999999999999999999999984 3445678889
Q ss_pred cEEEeccC--ccCcccHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 000851 454 MGLVSQEP--ALFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 525 (1253)
Q Consensus 454 i~~v~Q~~--~lf~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriai 525 (1253)
|||++|++ .+|+.|++||+.++... .+. +++.++++..++.+ .....+.+||||||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEH-----------LKDKPTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhCCcccCCHHHHHHHHH
Confidence 99999998 57888999999875321 122 23444445554433 3345567999999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 526 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 526 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+. .||++++|++|++++.|+++++.+.
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999998854 799999999999987 5999999999999999999988764
No 310
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.8e-41 Score=363.56 Aligned_cols=199 Identities=38% Similarity=0.585 Sum_probs=181.0
Q ss_pred EEEEEEEEECCCCC---CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000851 377 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQ 453 (1253)
Q Consensus 377 i~~~~v~f~y~~~~---~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 453 (1253)
|+++||+++|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57899999997542 2599999999999999999999999999999999999999999999998 5
Q ss_pred cEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 454 MGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 454 i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
|+|++|+|.+|+.|++||+.++.. ...++..++++.+++.+++..+|.|+++.+++.+.+||||||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998743 3455677788888999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHH-HHHHH-cCCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000851 534 KILLLDEATSALDAESELIVQR-ALEKI-MSNRTTIVVAHRLSTVRDVDTIMVLKNGQ 589 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~-~l~~~-~~~~t~i~itH~l~~~~~~d~i~vl~~G~ 589 (1253)
+++||||||++||+++.+.+.+ .+++. .+++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 45655 34789999999999998899999999985
No 311
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2e-41 Score=357.89 Aligned_cols=178 Identities=37% Similarity=0.661 Sum_probs=166.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+.+ +.++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23699999999999999999999999999999999999999999999999988766 567889999
Q ss_pred EEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000851 1086 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 1165 (1253)
Q Consensus 1086 ~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1165 (1253)
|+||+|.+|+.|++||+ ..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 357999999999999999999999
Q ss_pred EEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhccCEEEEEeCCEEEEec
Q 000851 1166 LLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1166 LlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~G 1224 (1253)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999999865
No 312
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.5e-41 Score=370.61 Aligned_cols=201 Identities=37% Similarity=0.569 Sum_probs=174.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH---HHhc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLRR 1082 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~---~lR~ 1082 (1253)
|+++|++++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 34699999999999999999999999999999999999999999999999999887643 4688
Q ss_pred ceEEEccCCCccc-ccHHHHhccCCC------CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1083 KIGLVQQEPALFS-TTIYENIKYGNE------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1083 ~i~~V~Qdp~Lf~-gTIreNl~~g~~------~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
+++|+||+|.+|. .|++||+.++.. ...++++.++++..++.++..+.| .+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999986 699999987421 112345667777777665544433 5799999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCE
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGK 1219 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ 1219 (1253)
||||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999874 48999999999999976 99999999985
No 313
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-41 Score=392.42 Aligned_cols=214 Identities=29% Similarity=0.499 Sum_probs=183.7
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
..|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.++ .++.|
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 35999999999974 349999999999999999999999999999999999999999999999999987654 46789
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 455 GLVSQEPALFAT-SIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
|||+|++.||+. |++|||.|+... .+. +++.+.++..++.++. .....+||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFA-----------KRKPHQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHH
Confidence 999999999976 999999987431 122 2344455555544443 3444689999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
||+.+|++||||||||+||+.+...+.+.|+++. .+.|+|+|||+++++.. ||+|++|++|++++.|+++|+..+.
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999999999888764 37899999999998754 8999999999999999999987653
No 314
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4e-41 Score=378.69 Aligned_cols=226 Identities=29% Similarity=0.471 Sum_probs=185.1
Q ss_pred EEEEeEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH
Q 000851 1006 IELRNVSFKYPVR------PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS 1079 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~ 1079 (1253)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 1356999999999999999999999999999999999999999999999999998876543
Q ss_pred ---HhcceEEEccCCC--cc-cccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000851 1080 ---LRRKIGLVQQEPA--LF-STTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 1146 (1253)
Q Consensus 1080 ---lR~~i~~V~Qdp~--Lf-~gTIreNl~~g~~---~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1146 (1253)
+|++|+|+||+|. ++ ..|++||+.++.. ... ++++.++++..++.+ ......+.+||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhCC
Confidence 6788999999983 44 3799999964311 111 223334444443321 22344567899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEe
Q 000851 1147 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEI 1223 (1253)
Q Consensus 1147 gGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~ 1223 (1253)
||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999998753 7899999999999975 999999999999999
Q ss_pred cChhHHhhcccchHHHHH
Q 000851 1224 GSHEQLLRKENGIYKQLI 1241 (1253)
Q Consensus 1224 Gt~~eLl~~~~g~y~~L~ 1241 (1253)
|++++++..++..++.+.
T Consensus 233 g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 233 CDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred CCHHHHcCCCCHHHHHHH
Confidence 999999874333444443
No 315
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-41 Score=375.25 Aligned_cols=204 Identities=31% Similarity=0.478 Sum_probs=178.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 4999999999963 46999999999999999999999999999999999999999999999998753 567899
Q ss_pred EEEccCCCccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000851 1085 GLVQQEPALFS-TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNP 1163 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~-gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p 1163 (1253)
+|++|++.+|+ .|++||+.++.....++++.++++..++.++. .....+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRA-----------NEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 69999998754322345566667776665443 3344689999999999999999999
Q ss_pred CEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChh
Q 000851 1164 SILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHE 1227 (1253)
Q Consensus 1164 ~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~ 1227 (1253)
++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999999864 37899999999999865 9999999999999988764
No 316
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.1e-41 Score=373.50 Aligned_cols=216 Identities=29% Similarity=0.519 Sum_probs=183.5
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+... ++.++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 689999999974 34999999999999999999999999999999999999999999999999987766544 458999
Q ss_pred EeccCccC-cccHHHHHhcCCCC--CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 457 VSQEPALF-ATSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 457 v~Q~~~lf-~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
++|++.++ ..|++||+.++... ...++..+ .+.++++.+ |++......+.+||||||||++||||++++|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p 151 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRP 151 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999875 56999999875321 12221111 122344444 5555566777899999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 534 KILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 152 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 152 ALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 9999999999999999999999999885 47999999999999988999999999999999999888765
No 317
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-41 Score=378.11 Aligned_cols=220 Identities=32% Similarity=0.512 Sum_probs=187.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~--i~~ 1077 (1253)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 7 AIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred eEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 5999999999963 4699999999999999999999999999999999999985 48999999999864 345
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC------CCC-HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE------DAS-EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~------~~~-d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++||||++.+|+.|++||+.++.. +.. ++.+.++++.+++.+++.. .....+..||||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHHH
Confidence 678899999999999999999999986421 111 2334566777776544332 23345568999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEe-----CCEEEEec
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ-----QGKVAEIG 1224 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~-----~G~ive~G 1224 (1253)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999998778999999999999866 99999998 59999999
Q ss_pred ChhHHhhccc
Q 000851 1225 SHEQLLRKEN 1234 (1253)
Q Consensus 1225 t~~eLl~~~~ 1234 (1253)
+++++.+.+.
T Consensus 237 ~~~~~~~~~~ 246 (259)
T PRK14260 237 VTTQIFSNPL 246 (259)
T ss_pred CHHHHhcCCC
Confidence 9999976433
No 318
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-41 Score=369.28 Aligned_cols=209 Identities=26% Similarity=0.466 Sum_probs=177.8
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++++|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++|
T Consensus 1 i~~~~~~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGDF--EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECCE--EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 5789999999743 499999999999999999999999999999999999999999999999988653 3566788999
Q ss_pred EeccCccCcc-cHHHHHhcCCC--CCC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALFAT-SIANNILLGKE--DAS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
++|++.++.. |++||+.++.. ... .+++.++++..++.++... ...+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADR-----------LVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------ChhhCCHHHHHHHHHHHHH
Confidence 9999998875 99999987421 111 2344555555555444333 3458999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchh
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 599 (1253)
+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999998753 7899999999999876 899999999999999887664
No 319
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-41 Score=376.11 Aligned_cols=212 Identities=30% Similarity=0.463 Sum_probs=185.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999973 46999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccCCCc-ccccHHHHhccCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPAL-FSTTIYENIKYGNEDA------SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~L-f~gTIreNl~~g~~~~------~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|+||++.+ ++.|++||+.++.... .++.+.++++..++.++.. .....||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAG-----------RDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHHH
Confidence 99999987 6789999998753211 1234555666666544332 3346899999999999999
Q ss_pred hc------cCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1159 IL------KNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1159 Ll------r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
|+ ++|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999875 47899999999999865 999999999999999999998
Q ss_pred hh
Q 000851 1230 LR 1231 (1253)
Q Consensus 1230 l~ 1231 (1253)
.+
T Consensus 229 ~~ 230 (258)
T PRK13548 229 LT 230 (258)
T ss_pred hC
Confidence 76
No 320
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.1e-41 Score=374.35 Aligned_cols=216 Identities=29% Similarity=0.481 Sum_probs=182.7
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH-HhcccE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQMG 455 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i~ 455 (1253)
++++||+++|+++ .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGKR--KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCCE--EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 4789999999743 4999999999999999999999999999999999999999999999999988776554 356799
Q ss_pred EEeccCccCcc-cHHHHHhcCCCCC--CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000851 456 LVSQEPALFAT-SIANNILLGKEDA--SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRN 532 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~ 532 (1253)
|++|++.+|.. |++||+.++.+.. ..++..+ .+++.++.+ |++........+||||||||++||||++.+
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 151 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALATN 151 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999986 9999998754211 1111111 122344444 555556667789999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 533 PKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 533 p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 152 PKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 99999999999999999999999999875 47899999999987765 89999999999999999888754
No 321
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-41 Score=375.67 Aligned_cols=223 Identities=32% Similarity=0.530 Sum_probs=190.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCCC--CHH
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRTL--NLR 1078 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~i--~~~ 1078 (1253)
++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||.++... +..
T Consensus 4 l~~~~v~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 4 IEVENLNTYFD---DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEeEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 78999999996 3469999999999999999999999999999999999975 3899999999998753 456
Q ss_pred HHhcceEEEccCCCcccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1079 SLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1079 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~-~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
.+|++++|+||+|.+|+.|++||+.++.. .. + ++++.++++.+++.+++.. .++..+.+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKD-------KLDKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHH-------HHhCCcccCCHHHHH
Confidence 78999999999999999999999986521 11 1 2345566777777655442 133456789999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999866 9999999999999999999997
Q ss_pred hcccchHH
Q 000851 1231 RKENGIYK 1238 (1253)
Q Consensus 1231 ~~~~g~y~ 1238 (1253)
..+.+.+.
T Consensus 234 ~~~~~~~~ 241 (250)
T PRK14266 234 INPKDKRT 241 (250)
T ss_pred hCCCChHH
Confidence 65555443
No 322
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-41 Score=379.72 Aligned_cols=216 Identities=31% Similarity=0.559 Sum_probs=187.2
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCC---cEEEECCeeCCCCCHHHHhc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS---GKILLDGHDLKSLQLKWLRE 452 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~---G~i~~~g~~~~~~~~~~~r~ 452 (1253)
.|+++|++|+|++...++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...+++
T Consensus 5 ~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~ 84 (282)
T PRK13640 5 IVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIRE 84 (282)
T ss_pred eEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHh
Confidence 589999999997533359999999999999999999999999999999999999998 89999999998777777888
Q ss_pred ccEEEeccCc--cCcccHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 453 QMGLVSQEPA--LFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 453 ~i~~v~Q~~~--lf~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
+||||+|++. +++.|+.||+.++.+. .+. +++.++++..++.++.... ..+||||||||++
T Consensus 85 ~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LS~G~~qrv~ 153 (282)
T PRK13640 85 KVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSE-----------PANLSGGQKQRVA 153 (282)
T ss_pred heEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHHHH
Confidence 9999999984 5678999999986432 223 2355566666665544443 4689999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 154 laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 154 IAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999998753 7899999999999988999999999999999999887653
No 323
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-41 Score=376.83 Aligned_cols=218 Identities=30% Similarity=0.467 Sum_probs=184.5
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCC--CCCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLK--SLQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~--~~~~~ 448 (1253)
.|+++||+++|++. ++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++. +.+..
T Consensus 4 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGSN--HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCCe--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 48999999999753 499999999999999999999999999999999999987 4999999999986 44556
Q ss_pred HHhcccEEEeccCccCcc-cHHHHHhcCCC--C--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHH
Q 000851 449 WLREQMGLVSQEPALFAT-SIANNILLGKE--D--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 519 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~-ti~~ni~~g~~--~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 519 (1253)
.+|++++|++|++.+|.. |+.||+.++.. . ... +++.++++..++.+++ .......+.+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEV-------KDRLNDYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccch-------hhhhccChhhCCHHH
Confidence 778899999999999976 99999987531 1 011 2334444444433222 123455677899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcch
Q 000851 520 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVD 598 (1253)
Q Consensus 520 ~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 598 (1253)
|||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999865 89999999999999999998
Q ss_pred hhhc
Q 000851 599 LISK 602 (1253)
Q Consensus 599 l~~~ 602 (1253)
+...
T Consensus 235 ~~~~ 238 (253)
T PRK14267 235 VFEN 238 (253)
T ss_pred HHhC
Confidence 8754
No 324
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-41 Score=379.57 Aligned_cols=215 Identities=31% Similarity=0.482 Sum_probs=185.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999742 24589999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCC--cccccHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHH
Q 000851 1085 GLVQQEPA--LFSTTIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIA 1156 (1253)
Q Consensus 1085 ~~V~Qdp~--Lf~gTIreNl~~g~~~--~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLA 1156 (1253)
+|+||+|. ++..|+++|+.++... .. ++++.++++..++.++. .....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-----------DYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHHHHHH
Confidence 99999994 4556899999875321 12 22344555555544332 234468999999999999
Q ss_pred HHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhccCEEEEEeCCEEEEecChhHHhh
Q 000851 1157 RAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1157 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
||++.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 231 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFD 231 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999999998753 789999999999998899999999999999999999876
No 325
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-41 Score=378.48 Aligned_cols=216 Identities=29% Similarity=0.566 Sum_probs=184.9
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.++++|++++|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.|+
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 48999999999643345999999999999999999999999999999999999999999999999998777778889999
Q ss_pred EEeccCc--cCcccHHHHHhcCCCC--CCHH----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 456 LVSQEPA--LFATSIANNILLGKED--ASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 456 ~v~Q~~~--lf~~ti~~ni~~g~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
||+|++. ++..|++||+.++... .+.+ ++.++++..++.+++ .....+||||||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-----------DKEPQNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCCcccCCHHHHHHHHHHH
Confidence 9999983 4567999999886321 2222 234444555554444 3445689999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998753 4899999999999888999999999999999998887653
No 326
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-41 Score=375.38 Aligned_cols=218 Identities=33% Similarity=0.559 Sum_probs=182.8
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
++++||+++|++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999752 349999999999999999999999999999999999999999999999999988777778889999
Q ss_pred EeccCccCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhCcHHHHhcCCCCccc--cccCCCCCCChHHHHHHHHHHHhcc
Q 000851 457 VSQEPALFA-TSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQT--QVGEGGTQLSGGQKQRIAIARAVLR 531 (1253)
Q Consensus 457 v~Q~~~lf~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t--~~g~~g~~LSgGq~qriaiARal~~ 531 (1253)
++|++.+|. .|++||+.++... ...++.. ..+.+.++.+ |+.. ...+.+.+||||||||++||||+++
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~~ 152 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIR-----ERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALAA 152 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHhc
Confidence 999999986 5999999875321 1111111 1112333333 3332 3456678999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 532 NPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 532 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 153 ~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 153 DPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999998853 7999999999998765 899999999999999998887643
No 327
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-41 Score=377.42 Aligned_cols=220 Identities=29% Similarity=0.494 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCCCC-HH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTLN-LR 1078 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~i~-~~ 1078 (1253)
.++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~---~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFA---GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEEC---CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 589999999997 34699999999999999999999999999999999999986 6999999999987663 45
Q ss_pred HHhcceEEEccCCCcccccHHHHhccCCC---CCCHHHHH----HHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1079 SLRRKIGLVQQEPALFSTTIYENIKYGNE---DASEIELM----KATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1079 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~---~~~d~ei~----~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
.+|++++|+||+|.+|+.|+++|+.++.. ..++++.. +.++..++. ..+++.+...+.+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLW-------DAVKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCC-------chhhhHhhCCcccCCHHHHH
Confidence 67899999999999999999999987531 12333332 223333332 22223445667789999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
|++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999999865 9999999999999999999998
Q ss_pred hccc
Q 000851 1231 RKEN 1234 (1253)
Q Consensus 1231 ~~~~ 1234 (1253)
+.+.
T Consensus 251 ~~~~ 254 (276)
T PRK14271 251 SSPK 254 (276)
T ss_pred hCcC
Confidence 7433
No 328
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.5e-41 Score=391.92 Aligned_cols=210 Identities=28% Similarity=0.433 Sum_probs=177.8
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCc----cCCCCCHHHH---h-cceEEEccCCC
Q 000851 1021 ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGY----DIRTLNLRSL---R-RKIGLVQQEPA 1092 (1253)
Q Consensus 1021 ~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~----di~~i~~~~l---R-~~i~~V~Qdp~ 1092 (1253)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++...+...+ | ++|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35799999999999999999999999999999999999999999999995 6777766554 3 58999999999
Q ss_pred ccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000851 1093 LFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 1165 (1253)
Q Consensus 1093 Lf~-gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1165 (1253)
+|+ .|++||+.++.. ..+ .+...++++.+++.++..+ ...+||||||||++|||||+.+|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~-----------~~~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADK-----------KPGELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 998 799999987631 112 2345566666666554433 3357999999999999999999999
Q ss_pred EEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHHhhcccchHHHHH
Q 000851 1166 LLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLI 1241 (1253)
Q Consensus 1166 LlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~L~ 1241 (1253)
||||||||+||+.+.+.+++.|.+..+ ++|+|+|||+++.+. .||+|++|++|++++.|++++++.++...|.+.+
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~~~ 264 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVADF 264 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHHHH
Confidence 999999999999999999999998753 789999999999985 5999999999999999999999875555454433
No 329
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-41 Score=380.25 Aligned_cols=212 Identities=29% Similarity=0.454 Sum_probs=181.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCC--CCCHHHHhcc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIR--TLNLRSLRRK 1083 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~--~i~~~~lR~~ 1083 (1253)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999963 46999999999999999999999999999999999999999999999999985 3345678899
Q ss_pred eEEEccCCC--cccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1084 IGLVQQEPA--LFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1084 i~~V~Qdp~--Lf~gTIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
++||||+|. +|..|+.+|+.++.. ..+. +++.++++..++.++. .....+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-----------HQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-----------cCCchhCCHHHHHHHHH
Confidence 999999986 577899999986421 1222 2334455555554432 22346799999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||++++|++|++++.|+++++..
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999875 47899999999999965 99999999999999999999876
No 330
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-41 Score=375.11 Aligned_cols=218 Identities=31% Similarity=0.511 Sum_probs=186.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCCC--CH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTL--NL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~i--~~ 1077 (1253)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 4699999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCCC--C-C----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNED--A-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~--~-~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++|+||++.+|+.|++||+.++... . + .+++.++++.+++.+.+. .........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVK-------DDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHH
Confidence 5678999999999999999999999865211 1 1 123455666665533222 223345678999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999866 999999999999999999999
Q ss_pred hhc
Q 000851 1230 LRK 1232 (1253)
Q Consensus 1230 l~~ 1232 (1253)
...
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 764
No 331
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-41 Score=373.90 Aligned_cols=217 Identities=27% Similarity=0.471 Sum_probs=184.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-Hhcc
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRK 1083 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~-lR~~ 1083 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|++
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3889999999963 46999999999999999999999999999999999999999999999999998877644 5789
Q ss_pred eEEEccCCCccc-ccHHHHhccCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000851 1084 IGLVQQEPALFS-TTIYENIKYGNE---DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 1159 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~-gTIreNl~~g~~---~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARAL 1159 (1253)
++|+||++.+|+ .|++||+.++.. ..+.++. ...+.++++.+ |++.........||||||||++|||||
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 999999999887 499999987521 1122211 12233444444 444445556678999999999999999
Q ss_pred ccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1160 LKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1160 lr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
+++|++|||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+.. ||++++|++|++++.|++++++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999998865 48899999999988755 99999999999999999999875
No 332
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-41 Score=381.51 Aligned_cols=215 Identities=33% Similarity=0.560 Sum_probs=181.1
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCC----CHHH
Q 000851 1006 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL----NLRS 1079 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i----~~~~ 1079 (1253)
|+++||+++|+... ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13641 3 IKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLKK 82 (287)
T ss_pred EEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997321 14699999999999999999999999999999999999999999999999998653 3456
Q ss_pred HhcceEEEccCC--CcccccHHHHhccCCC--CCCHHH----HHHHHHHhcHHHHHHhCCCCccc-cccCCCCCCChhHH
Q 000851 1080 LRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIE----LMKATKAANAHGFISRMPEGYQS-HVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1080 lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d~e----i~~al~~a~l~~~I~~lp~gldt-~vge~G~~LSgGQk 1150 (1253)
.|+.++|+||+| .+|+.|++|||.++.. ..+.++ +.++++..+ ++. .......+||||||
T Consensus 83 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g-----------L~~~~~~~~~~~LSgGq~ 151 (287)
T PRK13641 83 LRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVG-----------LSEDLISKSPFELSGGQM 151 (287)
T ss_pred HHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------CChhHhhCCcccCCHHHH
Confidence 788999999998 5888899999986421 122222 233333333 331 23445568999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1228 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~e 1228 (1253)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. ++.|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKE 231 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999875 47899999999999865 99999999999999999999
Q ss_pred Hhh
Q 000851 1229 LLR 1231 (1253)
Q Consensus 1229 Ll~ 1231 (1253)
+++
T Consensus 232 ~~~ 234 (287)
T PRK13641 232 IFS 234 (287)
T ss_pred Hhc
Confidence 876
No 333
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-41 Score=380.10 Aligned_cols=212 Identities=33% Similarity=0.536 Sum_probs=180.3
Q ss_pred EEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHH----hcc
Q 000851 378 EFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL----REQ 453 (1253)
Q Consensus 378 ~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~ 453 (1253)
.++|++++|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+..++ +++
T Consensus 26 ~~~~~~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQT--VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCCc--eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 466888888643 48999999999999999999999999999999999999999999999999987765443 457
Q ss_pred cEEEeccCccCc-ccHHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 454 MGLVSQEPALFA-TSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 454 i~~v~Q~~~lf~-~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
++|++|++.+|. .|++||+.++... .. .+++.++++..++.+++...| .+||||||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 999999999885 5999999875311 11 234555566666555554443 48999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||++.+|++|||||||++||+.+.+.+.+.|.++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999999999874 37999999999998865 899999999999999999998754
No 334
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-41 Score=372.65 Aligned_cols=211 Identities=38% Similarity=0.612 Sum_probs=183.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+. .++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 478999999973 469999999999999999999999999999999999999999999999999987654 368899
Q ss_pred EEccCCCcccc-cHHHHhccCCC------CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFST-TIYENIKYGNE------DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~~------~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|++|++.+|.+ |+++|+.++.. ...++++.++++..++.++..+.| ..||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 99999986421 111334556666666655554433 5899999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
|+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999998753 8999999999999865 999999999999999999998764
No 335
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.8e-41 Score=367.76 Aligned_cols=206 Identities=26% Similarity=0.444 Sum_probs=175.0
Q ss_pred EEEEEEEEECCCCCC--cccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 377 IEFSEVCFAYPSRPH--MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~--~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
|+++||+++|++... ++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999975421 49999999999999999999999999999999999999999999999999875 345678899
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 455 GLVSQEPALFAT-SIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
+|++|++.+|.. |++||+.+.... ... +++.++++.. |++......+.+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRL-----------GMEELLDRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCHHHHhhhhhhcCHHHHHHHHHHH
Confidence 999999999985 999999764221 111 2333344444 3444445566789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEee
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 594 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 594 (1253)
|++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999875 47999999999998865 8999999999998764
No 336
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.1e-41 Score=365.41 Aligned_cols=203 Identities=25% Similarity=0.469 Sum_probs=176.4
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ..+++.++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 478999999964 3499999999999999999999999999999999999999999999999988654 456778999
Q ss_pred EeccCccCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 457 VSQEPALFA-TSIANNILLGKE--DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 457 v~Q~~~lf~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
|+|++.+|. .|++||+.++.. ..+.+++.++++..++.+... ..+.+||||||||++||||++.+|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAK-----------KKVKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHh-----------hhHhhCCHHHHHHHHHHHHHhcCC
Confidence 999998885 699999987532 223456666777776655443 334689999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEee
Q 000851 534 KILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 594 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 594 (1253)
+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999875 47999999999999865 8999999999998765
No 337
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.1e-41 Score=368.71 Aligned_cols=201 Identities=42% Similarity=0.682 Sum_probs=172.0
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEE
Q 000851 1007 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGL 1086 (1253)
Q Consensus 1007 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1086 (1253)
+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 478999999732 2469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCCC--cccccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1087 VQQEPA--LFSTTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1087 V~Qdp~--Lf~gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
+||++. +++.|++||+.++.. ..+ ++++.+.++..++.++. ......||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLR-----------DRSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCHHHHHHHHHHHH
Confidence 999983 678899999987421 112 22344455555554433 33446899999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCE
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGK 1219 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ 1219 (1253)
|+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999875 47899999999999987 99999999985
No 338
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-41 Score=380.10 Aligned_cols=216 Identities=30% Similarity=0.508 Sum_probs=186.1
Q ss_pred cEEEEEEEEECCCC----CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCC-HHHH
Q 000851 376 QIEFSEVCFAYPSR----PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ-LKWL 450 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~----~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~ 450 (1253)
-++++|++|+|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.. ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999742 234999999999999999999999999999999999999999999999999987643 3557
Q ss_pred hcccEEEeccCc--cCcccHHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 451 REQMGLVSQEPA--LFATSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 451 r~~i~~v~Q~~~--lf~~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
|+.+|||+|+|. +|..|+.+|+.|+... .+ .+++.++++..++.+++.+. ..+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHA-----------PHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHH
Confidence 889999999984 6777999999986321 12 23455566666665555444 35899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhh
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
++|||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999885 379999999999999889999999999999999999987
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 65
No 339
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-41 Score=374.94 Aligned_cols=218 Identities=32% Similarity=0.470 Sum_probs=185.2
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCCCCHHHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSLQLKWL 450 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~~~ 450 (1253)
.++++||+++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...+
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQV--EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECCe--eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 48999999999753 499999999999999999999999999999999999974 79999999999988777788
Q ss_pred hcccEEEeccCccC-cccHHHHHhcCCCC----CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 451 REQMGLVSQEPALF-ATSIANNILLGKED----AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 451 r~~i~~v~Q~~~lf-~~ti~~ni~~g~~~----~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
|+.|+|++|++.+| ..|++||+.++... .. .+++.++++..++.+.+ +......+.+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEV-------KDRLDAPAGKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCCcccCCHHHHH
Confidence 89999999999766 56999999875321 01 12344455555443222 12234556789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 99999999999999999999999999999999999999877899999999999986 48999999999999999999886
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 234 ~~ 235 (250)
T PRK14247 234 TN 235 (250)
T ss_pred cC
Confidence 54
No 340
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.8e-41 Score=368.58 Aligned_cols=202 Identities=35% Similarity=0.532 Sum_probs=173.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCH---HHHhc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL---RSLRR 1082 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~---~~lR~ 1082 (1253)
|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999632 469999999999999999999999999999999999999999999999999987764 34788
Q ss_pred ceEEEccCCCccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1083 KIGLVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1083 ~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
+++||||+|.+|+ .|++||+.++.. ..+ ++++.++++..++.+...+ ...+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRA-----------LPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------ChhhcCHHHHHHHHH
Confidence 9999999999998 599999987521 111 2345556666665544333 335799999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEE
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKV 1220 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~i 1220 (1253)
||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 58999999999999976 999999999974
No 341
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-41 Score=382.55 Aligned_cols=221 Identities=33% Similarity=0.544 Sum_probs=181.6
Q ss_pred cCcEEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCC----C-
Q 000851 1003 KGNIELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT----L- 1075 (1253)
Q Consensus 1003 ~g~I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~----i- 1075 (1253)
.+.|+++|++++|+.++ ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 35799999999997432 1359999999999999999999999999999999999999999999999998852 2
Q ss_pred CHHHHhcceEEEccCC--CcccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHH--hCCCCccccccCCCCCCChhH
Q 000851 1076 NLRSLRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIELMKATKAANAHGFIS--RMPEGYQSHVGDRGVQLSGGQ 1149 (1253)
Q Consensus 1076 ~~~~lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d~ei~~al~~a~l~~~I~--~lp~gldt~vge~G~~LSgGQ 1149 (1253)
+...+|++|+|+||+| .+|+.|++||+.++.. ....++..+.+ .+.++ .+|++ .......+|||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~ll~~~~L~~~---~~~~~~~~LS~Gq 155 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKV-----PELLKLVQLPED---YVKRSPFELSGGQ 155 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHcCCChh---HhcCChhhCCHHH
Confidence 3567889999999998 4778899999987532 12222222211 11222 22222 2334557899999
Q ss_pred HHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecCh
Q 000851 1150 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSH 1226 (1253)
Q Consensus 1150 kQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~ 1226 (1253)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (289)
T PRK13645 156 KRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSP 235 (289)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999998753 7899999999999855 999999999999999999
Q ss_pred hHHhh
Q 000851 1227 EQLLR 1231 (1253)
Q Consensus 1227 ~eLl~ 1231 (1253)
+++.+
T Consensus 236 ~~~~~ 240 (289)
T PRK13645 236 FEIFS 240 (289)
T ss_pred HHHhc
Confidence 98865
No 342
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-41 Score=377.83 Aligned_cols=214 Identities=29% Similarity=0.447 Sum_probs=187.6
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcc
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRK 1083 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~ 1083 (1253)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 36999999999973 469999999999999999999999999999999999999999999999999988888888899
Q ss_pred eEEEccCCCccc-ccHHHHhccCC-CC---------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000851 1084 IGLVQQEPALFS-TTIYENIKYGN-ED---------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~-gTIreNl~~g~-~~---------~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQr 1152 (1253)
++|+||++.+|. .|++||+.++. +. ..++.+.++++..++.++.. ....+||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLAD-----------QSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCChHHHHH
Confidence 999999998875 69999998752 11 11234566666666655433 3446899999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
++||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998753 7899999999998865 999999999999999999998
Q ss_pred hh
Q 000851 1230 LR 1231 (1253)
Q Consensus 1230 l~ 1231 (1253)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 75
No 343
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-41 Score=386.35 Aligned_cols=228 Identities=26% Similarity=0.395 Sum_probs=185.9
Q ss_pred EEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC----CCccEEEECCccCCCCCHHHH
Q 000851 1006 IELRNVSFKYPVRPD-ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD----PISGTVLIDGYDIRTLNLRSL 1080 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~----p~~G~I~idG~di~~i~~~~l 1080 (1253)
++++||+++|+.+.. .++|+||||+|++||++||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 799999999974322 369999999999999999999999999999999999998 489999999999999887665
Q ss_pred h----cceEEEccCCC--ccc-ccHHHH----hccCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000851 1081 R----RKIGLVQQEPA--LFS-TTIYEN----IKYGNE---DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 1146 (1253)
Q Consensus 1081 R----~~i~~V~Qdp~--Lf~-gTIreN----l~~g~~---~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1146 (1253)
| ++|+||||+|. +++ -|+.+| +..... ....+++.++++.+++.+.. ........+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPA--------SRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhCCchhCC
Confidence 4 37999999995 443 355544 433211 11234456666666664321 12334557899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhh-ccCEEEEEeCCEEEEe
Q 000851 1147 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEI 1223 (1253)
Q Consensus 1147 gGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~ 1223 (1253)
||||||++|||||+.+|++||+||||++||+.+++.+.+.|+++.+ +.|+|+|||+++.+. .||+|+||++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998753 789999999999985 5999999999999999
Q ss_pred cChhHHhhcccchHHHHH
Q 000851 1224 GSHEQLLRKENGIYKQLI 1241 (1253)
Q Consensus 1224 Gt~~eLl~~~~g~y~~L~ 1241 (1253)
|+++++++++...|.+.+
T Consensus 236 g~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQAL 253 (326)
T ss_pred CCHHHHhhCCCChHHHHH
Confidence 999999986666666543
No 344
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.9e-41 Score=369.36 Aligned_cols=198 Identities=30% Similarity=0.530 Sum_probs=169.3
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEE
Q 000851 1007 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGL 1086 (1253)
Q Consensus 1007 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~ 1086 (1253)
+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 46999999999999999999999999999999999999999999999998764 47889999
Q ss_pred EccCCCc---ccccHHHHhccCCCC----------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1087 VQQEPAL---FSTTIYENIKYGNED----------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1087 V~Qdp~L---f~gTIreNl~~g~~~----------~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
|||+|.+ |+.|++||+.++... ..++++.++++..++.++..+ ...+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-----------QIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHH
Confidence 9999986 568999999875321 112345666666666554433 3357999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEec
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1224 (1253)
+|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999875 67899999999999866 9999999886 55554
No 345
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-41 Score=381.32 Aligned_cols=219 Identities=33% Similarity=0.538 Sum_probs=182.1
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCC----CHHH
Q 000851 1006 IELRNVSFKYPVRP--DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL----NLRS 1079 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i----~~~~ 1079 (1253)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997422 14699999999999999999999999999999999999999999999999998764 3467
Q ss_pred HhcceEEEccCC--CcccccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChhHHHHHH
Q 000851 1080 LRRKIGLVQQEP--ALFSTTIYENIKYGNE--DASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1080 lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d~ei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSgGQkQrla 1154 (1253)
+|++|+|+||+| .+|+.|++||+.++.. ..+.++..+. +.++++.+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 889999999998 6888999999986421 1233332211 11222222 332 1234456789999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||++++|++|++++.|+++++++
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999875 47899999999999865 99999999999999999999876
No 346
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-41 Score=377.05 Aligned_cols=216 Identities=32% Similarity=0.522 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++|++++|++....+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.+.+...+|++|+
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 48999999999754334999999999999999999999999999999999999999999999999998888778889999
Q ss_pred EEeccCc-cC-cccHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 456 LVSQEPA-LF-ATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 456 ~v~Q~~~-lf-~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
||+|+|. +| ..|+++|+.++... ... +++.++++..++.++ ....+.+||||||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLER-----------ADYEPNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCCcccCCHHHHHHHHHHH
Confidence 9999985 44 56899999886432 122 233344444444332 33455689999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|++.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998753 7899999999999888999999999999999999988654
No 347
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.5e-41 Score=385.06 Aligned_cols=214 Identities=29% Similarity=0.504 Sum_probs=180.8
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
..|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++|
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 35999999999974 34999999999999999999999999999999999999999999999999987654 4578899
Q ss_pred EEEeccCccCc-ccHHHHHhcCCCC--CCHHH----HHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 455 GLVSQEPALFA-TSIANNILLGKED--ASMDR----VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 455 ~~v~Q~~~lf~-~ti~~ni~~g~~~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
|||||++.++. .|++||+.+.... .+..+ +.++++.. ++++..++.+ .+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-------~l~~~~~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFA-------KLENKADAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-------CCchHhcCch----hhCCHHHHHHHHHHH
Confidence 99999999886 5999999853211 12222 22223322 2333334444 579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||+.+|++|||||||++||+.+.+.+++.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999985 47999999999999976 899999999999999999998654
No 348
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.9e-41 Score=387.48 Aligned_cols=229 Identities=28% Similarity=0.465 Sum_probs=187.7
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC---ccEEEECCccCCCCCHHHH
Q 000851 1005 NIELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI---SGTVLIDGYDIRTLNLRSL 1080 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~---~G~I~idG~di~~i~~~~l 1080 (1253)
-++++|++++|+.+. ..++++||||+|++||++||+|+||||||||+++|+|+++|. +|+|.+||.++..++...+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 489999999996432 246999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cceEEEccCC--Cccc-ccHHHHhccC---CCCCCHHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000851 1081 R----RKIGLVQQEP--ALFS-TTIYENIKYG---NEDASEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 1146 (1253)
Q Consensus 1081 R----~~i~~V~Qdp--~Lf~-gTIreNl~~g---~~~~~d~e----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1146 (1253)
| ++|+||+|+| .+++ .|+.+|+... ....+.++ +.+.++.++ +|++. ..++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vg-------L~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVK-------MPEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-------CCChH-HHhcCCcccCC
Confidence 3 4899999999 4554 4777776421 11123222 233333333 34332 22456678899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEe
Q 000851 1147 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEI 1223 (1253)
Q Consensus 1147 gGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~ 1223 (1253)
||||||++|||||+.+|++||+|||||+||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998754 7899999999999965 999999999999999
Q ss_pred cChhHHhhcccchHHHHH
Q 000851 1224 GSHEQLLRKENGIYKQLI 1241 (1253)
Q Consensus 1224 Gt~~eLl~~~~g~y~~L~ 1241 (1253)
|+++++++.+...|.+.+
T Consensus 244 g~~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 244 GNARDVFYQPSHPYSIGL 261 (330)
T ss_pred CCHHHHHhCCCCHHHHHH
Confidence 999999987666676643
No 349
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-41 Score=377.73 Aligned_cols=213 Identities=30% Similarity=0.475 Sum_probs=185.7
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.++++||+++|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.++
T Consensus 11 ~l~i~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPGR--TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECCE--EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 58999999999743 4999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEeccCccCcc-cHHHHHhcCCCC----------CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 456 LVSQEPALFAT-SIANNILLGKED----------ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~----------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
|++|++.++.. |+.||+.++... ...+++.++++..++.+++... ..+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-----------VDSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----------cccCCHHHHHHHH
Confidence 99999877665 999999976321 1123455666666665544433 3489999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
||||++.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 99999999999999999999999999999999998853 7899999999999865 89999999999999999988765
No 350
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-41 Score=374.20 Aligned_cols=219 Identities=31% Similarity=0.547 Sum_probs=186.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCC-CCCHH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIR-TLNLR 1078 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~-~i~~~ 1078 (1253)
.++++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYG---ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEEC---CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 488999999997 34699999999999999999999999999999999999986 5999999999985 45667
Q ss_pred HHhcceEEEccCCCcccccHHHHhccCCC--CCC-----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHH
Q 000851 1079 SLRRKIGLVQQEPALFSTTIYENIKYGNE--DAS-----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQ 1151 (1253)
Q Consensus 1079 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~~-----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQ 1151 (1253)
.+|+.++|+||++.+|+.|++||+.++.. ... ++++.++++.+++.+.+ .........+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEV-------KDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhh-------hHHhhcCcccCCHHHHH
Confidence 88999999999999999999999987521 111 12334455555544322 22334455689999999
Q ss_pred HHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1152 RVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1152 rlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
|++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999876 9999999999999999999987
Q ss_pred hcc
Q 000851 1231 RKE 1233 (1253)
Q Consensus 1231 ~~~ 1233 (1253)
.++
T Consensus 233 ~~~ 235 (249)
T PRK14253 233 SNP 235 (249)
T ss_pred cCC
Confidence 543
No 351
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.8e-41 Score=384.76 Aligned_cols=213 Identities=29% Similarity=0.466 Sum_probs=180.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYG---DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeC---CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 489999999996 34699999999999999999999999999999999999999999999999998654 35678999
Q ss_pred EEEccCCCccc-ccHHHHhccCC--CCCCHHHH----HHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFS-TTIYENIKYGN--EDASEIEL----MKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~-gTIreNl~~g~--~~~~d~ei----~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
+|+||++.+|. .|++||+.+.. ...+..+. .++++..++ ++.+++.+ .+||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l-------~~~~~~~~----~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARL-------ESKADVRV----ALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCC-------hhHhcCch----hhCCHHHHHHHHHHH
Confidence 99999999885 69999997421 11233322 223333332 33334443 579999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
||+.+|++|||||||++||+.+.+.+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999874 48899999999999965 999999999999999999999763
No 352
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-41 Score=378.09 Aligned_cols=214 Identities=29% Similarity=0.530 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
++++||+++|++. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.++|
T Consensus 4 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 4 IETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred EEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 7899999999632 249999999999999999999999999999999999999999999999999987777778889999
Q ss_pred EeccC--ccCcccHHHHHhcCCC--CCCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 457 VSQEP--ALFATSIANNILLGKE--DASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 457 v~Q~~--~lf~~ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
|+|++ .+|+.|+.||+.++.. ..+. +++.++++..++.+++.+. +..||||||||++||||
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrl~lara 151 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRV-----------PHHLSGGEKKRVAIAGV 151 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHHHHHHHH
Confidence 99998 4778899999987532 1222 2345556666655544433 45899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|+.+|++|||||||++||+.+.+.+.+.++++.+ ++|+|++||+++.+. .||+|++|++|++++.|++++++..
T Consensus 152 L~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 152 IAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999999999999999999999998753 789999999999985 5899999999999999999998764
No 353
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=376.44 Aligned_cols=214 Identities=29% Similarity=0.532 Sum_probs=182.5
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCC-HHHHhcccE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ-LKWLREQMG 455 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~r~~i~ 455 (1253)
++++|++++|++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.|+
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 6899999999632 34999999999999999999999999999999999999999999999999997765 456788999
Q ss_pred EEeccCc--cCcccHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 456 LVSQEPA--LFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 456 ~v~Q~~~--lf~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
||+|+|. +++.|+.|||.++... .+. +++.++++..++.+ .....+..||||||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEK-----------YRHRSPKTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHH-----------HhcCCcccCCHHHHHHHHHHH
Confidence 9999985 5677999999886422 122 23334444444433 344455689999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEeeCcchhhhc
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999999875 48999999999999988999999999999999998887543
No 354
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=8.5e-41 Score=369.85 Aligned_cols=211 Identities=36% Similarity=0.551 Sum_probs=181.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+. .++|+|+||+|.+||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 478999999973 469999999999999999999999999999999999999999999999999876653 478899
Q ss_pred EEccCCCcccc-cHHHHhccCCCC--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFST-TIYENIKYGNED--AS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~~~--~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|+||+|.+|++ |++||+.++... .+ ++++.++++..++.++.. ....+|||||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGD-----------RYPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHHHHHHHHHHH
Confidence 99999999975 999999875321 11 233444455554443333 3346799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
|+++|+++||||||++||+++++.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998654 7999999999999865 999999999999999999999763
No 355
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-41 Score=375.93 Aligned_cols=218 Identities=32% Similarity=0.532 Sum_probs=184.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~--i~~ 1077 (1253)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999973 3699999999999999999999999999999999999974 69999999999853 445
Q ss_pred HHHhcceEEEccCCCccc-ccHHHHhccCCC---CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhH
Q 000851 1078 RSLRRKIGLVQQEPALFS-TTIYENIKYGNE---DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 1149 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~---~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQ 1149 (1253)
..+|+.++|++|++.+|+ .|++||+.++.. ..+ ++.+.++++..++.+.+ .........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-------KDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHH
Confidence 678899999999999997 599999986421 111 22344556566553322 123344557899999
Q ss_pred HHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEe------CCEEEE
Q 000851 1150 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ------QGKVAE 1222 (1253)
Q Consensus 1150 kQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~------~G~ive 1222 (1253)
|||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999998777899999999999865 99999997 899999
Q ss_pred ecChhHHhhc
Q 000851 1223 IGSHEQLLRK 1232 (1253)
Q Consensus 1223 ~Gt~~eLl~~ 1232 (1253)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999999764
No 356
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-41 Score=375.21 Aligned_cols=218 Identities=29% Similarity=0.453 Sum_probs=184.4
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC--C---CCcEEEECCeeCCC--CCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE--P---TSGKILLDGHDLKS--LQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~--~~~~ 448 (1253)
-|+++|++|.|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+..
T Consensus 12 ~l~i~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQH--HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECCe--eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 48999999999743 49999999999999999999999999999999999997 3 69999999999863 3455
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCCC---CHH----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKEDA---SMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~---~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.+|+.|+|++|++.+|+.|++||+.++.... ..+ ++.++++..++.+++ .+.....+.+|||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-------KDRLHTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhhhhCCcccCCHHHHH
Confidence 6788999999999999899999998763211 112 233344444443322 22345667789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999865 8999999999999999999886
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
.+
T Consensus 243 ~~ 244 (259)
T PRK14274 243 SN 244 (259)
T ss_pred hC
Confidence 54
No 357
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-41 Score=379.74 Aligned_cols=225 Identities=30% Similarity=0.479 Sum_probs=187.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCCC--CH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRTL--NL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~i--~~ 1077 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 39 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 5899999999963 359999999999999999999999999999999999865 4999999999998643 33
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~-~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++||+|+|.+|+.|++||+.++.. .. + ++++.++++..++.+.+. .........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS-------DRLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh-------hHhhCChhhCCHHHH
Confidence 467899999999999999999999987521 11 1 123445555555432221 122345568999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+.+|++|||||||++||+++.+.+.+.|+++.+++|||++||+++.+.. ||++++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999865 999999999999999999999
Q ss_pred hhcccchHHH
Q 000851 1230 LRKENGIYKQ 1239 (1253)
Q Consensus 1230 l~~~~g~y~~ 1239 (1253)
.+++...|.+
T Consensus 269 ~~~~~~~~~~ 278 (286)
T PRK14275 269 FTNPKDRMTE 278 (286)
T ss_pred HhCCCcHHHH
Confidence 8754444443
No 358
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-41 Score=376.23 Aligned_cols=221 Identities=30% Similarity=0.499 Sum_probs=188.8
Q ss_pred cCcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCC----
Q 000851 1003 KGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIR---- 1073 (1253)
Q Consensus 1003 ~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~---- 1073 (1253)
.+.|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 457999999999973 3699999999999999999999999999999999999985 7999999998874
Q ss_pred CCCHHHHhcceEEEccCCCcccccHHHHhccCCC--C-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000851 1074 TLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNE--D-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 1146 (1253)
Q Consensus 1074 ~i~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~-----~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1146 (1253)
..+...+|++++|+||++.+|++|++||+.++.. . ..++++.++++.+++.+.+ ....+.....||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEV-------KDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhh-------hHHHhCCcccCC
Confidence 2345578899999999999999999999986521 1 1134556666666554322 233445567899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecC
Q 000851 1147 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1225 (1253)
Q Consensus 1147 gGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt 1225 (1253)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998777899999999999965 99999999999999999
Q ss_pred hhHHhhcc
Q 000851 1226 HEQLLRKE 1233 (1253)
Q Consensus 1226 ~~eLl~~~ 1233 (1253)
++++....
T Consensus 244 ~~~~~~~~ 251 (265)
T PRK14252 244 TDTIFIKP 251 (265)
T ss_pred HHHHHhCC
Confidence 99997533
No 359
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=8.6e-41 Score=384.33 Aligned_cols=223 Identities=26% Similarity=0.389 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCC-----------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCC
Q 000851 376 QIEFSEVCFAYPSR-----------PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS 444 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~-----------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~ 444 (1253)
-++++|++++|+.+ ...+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 48999999999631 1349999999999999999999999999999999999999999999999999988
Q ss_pred CCHH---HHhcccEEEeccC--ccCc-ccHHHHHhcCC----CCCCHHHH----HHHHHHhCcHHHHhcCCCCccccccC
Q 000851 445 LQLK---WLREQMGLVSQEP--ALFA-TSIANNILLGK----EDASMDRV----IEAAKAANAHSFVEGLPDGYQTQVGE 510 (1253)
Q Consensus 445 ~~~~---~~r~~i~~v~Q~~--~lf~-~ti~~ni~~g~----~~~~~~~~----~~~~~~~~~~~~i~~l~~g~~t~~g~ 510 (1253)
.+.. .+|++|+||+|+| .|++ .||.|||.++. +..+.++. .+.++..++. +.....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~----------~~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLL----------PNLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCC----------hHHhcC
Confidence 7654 3577899999998 4774 59999997642 12233332 3333333331 113355
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeC
Q 000851 511 GGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKN 587 (1253)
Q Consensus 511 ~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~ 587 (1253)
.+.+||||||||++|||||+.+|++||+|||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 6678999999999999999999999999999999999999999999998854 7899999999999976 899999999
Q ss_pred CEEEEeeCcchhhhcC-chHHH
Q 000851 588 GQVVESGTHVDLISKG-GEYAA 608 (1253)
Q Consensus 588 G~i~~~g~~~~l~~~~-~~y~~ 608 (1253)
|+|++.|+.+++..+. ..|.+
T Consensus 238 G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHH
Confidence 9999999999998753 34544
No 360
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=6.5e-41 Score=375.43 Aligned_cols=212 Identities=28% Similarity=0.436 Sum_probs=184.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 2 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAG---GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEEC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 78999999996 346999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEccCCC-cccccHHHHhccCCCC----------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHH
Q 000851 1086 LVQQEPA-LFSTTIYENIKYGNED----------ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVA 1154 (1253)
Q Consensus 1086 ~V~Qdp~-Lf~gTIreNl~~g~~~----------~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrla 1154 (1253)
|+||++. .+..|++||+.++... ..++++.++++..++.+.. ......||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLA-----------DRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCHHHHHHHH
Confidence 9999996 4568999999875311 1122455556665554432 2344679999999999
Q ss_pred HHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHHhh
Q 000851 1155 IARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1155 LARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
||||++.+|+++||||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999999875 3789999999999995 599999999999999999999865
No 361
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=9.9e-41 Score=364.99 Aligned_cols=210 Identities=29% Similarity=0.499 Sum_probs=187.1
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCH----HHHhc
Q 000851 1007 ELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL----RSLRR 1082 (1253)
Q Consensus 1007 ~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~----~~lR~ 1082 (1253)
.+.|+.|+|+.+ .++++|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 567999999743 469999999999999999999999999999999999999999999999998876542 34577
Q ss_pred ceEEEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000851 1083 KIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 1162 (1253)
Q Consensus 1083 ~i~~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~ 1162 (1253)
.++|++|+|.+|+.|++||+.++.+ .++++..++++..++.+++..+|.|+++.++....+||||||||++||||++++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999998643 345667788888898888999999999999998999999999999999999999
Q ss_pred CCEEEEecccCCCChHHHHHHHH--HHHHHc-CCceEEEEccCchhhhccCEEEEEeCCE
Q 000851 1163 PSILLLDEATSALDTASENLIQE--ALDKLM-EGRTTIMVAHRLSTIRNADKIAVLQQGK 1219 (1253)
Q Consensus 1163 p~ILlLDEaTS~LD~~te~~I~~--~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ 1219 (1253)
|++|||||||++||+.+.+.+.+ .++... .+.|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 454443 3689999999999998899999999984
No 362
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=372.71 Aligned_cols=219 Identities=32% Similarity=0.560 Sum_probs=185.1
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCC--CCH
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQL 447 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 447 (1253)
+.|+++||+++|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.+ .+.
T Consensus 2 ~~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGDF--QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECCc--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 468999999999753 499999999999999999999999999999999999863 69999999999864 345
Q ss_pred HHHhcccEEEeccCccCcccHHHHHhcCCCCC---C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHH
Q 000851 448 KWLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 520 (1253)
Q Consensus 448 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~ 520 (1253)
..+|+.++||+|++.+|+.|++||+.++.... . .+++.++++..++.+.+ .......+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEV-------KDRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------HHHHhcCCCCCCHHHH
Confidence 56788999999999999899999998863211 1 22344444455443322 2234556778999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchh
Q 000851 521 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 521 qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 599 (1253)
||++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998865 899999999999999999887
Q ss_pred hhc
Q 000851 600 ISK 602 (1253)
Q Consensus 600 ~~~ 602 (1253)
...
T Consensus 233 ~~~ 235 (250)
T PRK14240 233 FTN 235 (250)
T ss_pred HhC
Confidence 643
No 363
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=5.6e-41 Score=365.84 Aligned_cols=203 Identities=33% Similarity=0.571 Sum_probs=172.4
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++++|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGNV--TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECCe--eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 4789999999753 499999999999999999999999999999999999999999999999998765432 467999
Q ss_pred EeccCccCc-ccHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALFA-TSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf~-~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
++|++.+|. .|++||+.++... ... +++.++++..++.++ ......+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHL-----------LDRKPKQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------HhCChhhCCHHHHHHHHHHHHH
Confidence 999999986 5999999875321 122 233344444444433 3444568999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEee
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 594 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 594 (1253)
+.+|+++||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999875 37899999999999876 8999999999999875
No 364
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=6.4e-41 Score=354.14 Aligned_cols=178 Identities=35% Similarity=0.658 Sum_probs=165.3
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++|+|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+|+.++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999975423599999999999999999999999999999999999999999999999988665 5667889999
Q ss_pred EeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 000851 457 VSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 536 (1253)
Q Consensus 457 v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~il 536 (1253)
++|++.+|+.|++||+ +.+||||||||++||||++++|++|
T Consensus 80 ~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~l 120 (178)
T cd03247 80 LNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPIV 120 (178)
T ss_pred EccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999998 3579999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEee
Q 000851 537 LLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESG 594 (1253)
Q Consensus 537 ilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 594 (1253)
||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 121 llDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 121 LLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999887789999999999999889999999999998764
No 365
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=7.9e-41 Score=366.85 Aligned_cols=208 Identities=30% Similarity=0.517 Sum_probs=171.9
Q ss_pred EEEEEEEEECCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH---Hh
Q 000851 377 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW---LR 451 (1253)
Q Consensus 377 i~~~~v~f~y~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 451 (1253)
|+++||+++|++.. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996422 34999999999999999999999999999999999999999999999999998776543 33
Q ss_pred -cccEEEeccCccCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 452 -EQMGLVSQEPALFA-TSIANNILLGKE--DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 452 -~~i~~v~Q~~~lf~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
+.|+||+|++.+|+ .|++||+.++.. .....+..+. +.++++.+ |++........+||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKER-----AYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 67999999999986 499999987421 1111111111 11233333 4444445556789999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhhcCEEEEEeCCEEE
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLKNGQVV 591 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~ 591 (1253)
|++.+|++|||||||++||+.+...+.+.|.++. .++|+|++||+++.+..+|+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999885 378999999999999889999999999985
No 366
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=7.1e-41 Score=374.40 Aligned_cols=213 Identities=34% Similarity=0.561 Sum_probs=180.8
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCC----------
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ---------- 446 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---------- 446 (1253)
|+++||+|+|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+++
T Consensus 1 i~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGIL--TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCCe--eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 5799999999743 4999999999999999999999999999999999999999999999999986543
Q ss_pred ---HHHHhcccEEEeccCccCc-ccHHHHHhcCCC---CCCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCC
Q 000851 447 ---LKWLREQMGLVSQEPALFA-TSIANNILLGKE---DASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQL 515 (1253)
Q Consensus 447 ---~~~~r~~i~~v~Q~~~lf~-~ti~~ni~~g~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~L 515 (1253)
...+|+.++|++|++.+|. .|+.||+.++.. .... +++.++++.. |++......+.+|
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~L 147 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMV-----------GLADKADHMPAQL 147 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CChhHhhcChhhc
Confidence 2456889999999999885 699999987521 1111 2233333333 4444445566789
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000851 516 SGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVE 592 (1253)
Q Consensus 516 SgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~ 592 (1253)
|||||||++|||||+.+|+++||||||++||+.++..+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T TIGR03005 148 SGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE 227 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998753 7899999999999864 89999999999999
Q ss_pred eeCcchhhhc
Q 000851 593 SGTHVDLISK 602 (1253)
Q Consensus 593 ~g~~~~l~~~ 602 (1253)
.|+++++...
T Consensus 228 ~g~~~~~~~~ 237 (252)
T TIGR03005 228 QGKPDEIFRQ 237 (252)
T ss_pred eCCHHHHhcC
Confidence 9999988654
No 367
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-41 Score=373.85 Aligned_cols=224 Identities=29% Similarity=0.435 Sum_probs=191.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCCC--CH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRTL--NL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~i--~~ 1077 (1253)
.+.+++++++|. +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 8 ~~~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYG---NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 488999999996 34699999999999999999999999999999999999987 799999999998643 44
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC-----CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE-----DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-----~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQr 1152 (1253)
..+|++++|+||++.+|..|++||+.++.. ....+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 567889999999999999999999987531 1123456777777776554432 2345667899999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEe--------CCEEEEe
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ--------QGKVAEI 1223 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~--------~G~ive~ 1223 (1253)
++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998778899999999999865 99999996 8999999
Q ss_pred cChhHHhhcccchHH
Q 000851 1224 GSHEQLLRKENGIYK 1238 (1253)
Q Consensus 1224 Gt~~eLl~~~~g~y~ 1238 (1253)
|+++++++.+...+.
T Consensus 238 g~~~~~~~~~~~~~~ 252 (261)
T PRK14263 238 GPTAQIFQNPREQLT 252 (261)
T ss_pred CCHHHHHhCCCcHHH
Confidence 999999874443343
No 368
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-41 Score=374.57 Aligned_cols=220 Identities=25% Similarity=0.455 Sum_probs=184.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHH-hcc
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSL-RRK 1083 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~l-R~~ 1083 (1253)
.++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 489999999996 3469999999999999999999999999999999999999999999999999988876554 556
Q ss_pred eEEEccCCCcccc-cHHHHhccCCCCCC--------------HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChh
Q 000851 1084 IGLVQQEPALFST-TIYENIKYGNEDAS--------------EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGG 1148 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~g-TIreNl~~g~~~~~--------------d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgG 1148 (1253)
++|+||+|.+|++ |++||+.++..... +.+..+. ...+.++++.+ |++........+||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~--gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERV--GLLEHANRQAGNLAYG 157 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhC--ChhhhhhCChhhCCHH
Confidence 9999999999985 99999997531100 0000000 11123334443 4555556667789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecC
Q 000851 1149 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1225 (1253)
Q Consensus 1149 QkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt 1225 (1253)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|.+..+ ++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~ 237 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGT 237 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999999999999999998753 7899999999999866 99999999999999999
Q ss_pred hhHHhh
Q 000851 1226 HEQLLR 1231 (1253)
Q Consensus 1226 ~~eLl~ 1231 (1253)
++++..
T Consensus 238 ~~~~~~ 243 (255)
T PRK11300 238 PEEIRN 243 (255)
T ss_pred HHHHhh
Confidence 999875
No 369
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=9e-41 Score=376.43 Aligned_cols=214 Identities=25% Similarity=0.461 Sum_probs=181.2
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH---HHhc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLRE 452 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~ 452 (1253)
-|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 4899999999974 3499999999999999999999999999999999999999999999999998766543 3577
Q ss_pred ccEEEeccCccCcc-cHHHHHhcCCCC---CCHH----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 453 QMGLVSQEPALFAT-SIANNILLGKED---ASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 453 ~i~~v~Q~~~lf~~-ti~~ni~~g~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
+|+|++|++.+|+. |+.||+.++... .+.+ ++.+.++.. |+.........+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAV-----------GLRGAAKLMPSELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHc-----------CChhhhhCChhhCCHHHHHHHH
Confidence 89999999999986 999999875211 1111 222333333 3333334455689999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999876 89999999999999999999876
Q ss_pred c
Q 000851 602 K 602 (1253)
Q Consensus 602 ~ 602 (1253)
.
T Consensus 234 ~ 234 (269)
T PRK11831 234 N 234 (269)
T ss_pred C
Confidence 4
No 370
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-41 Score=379.07 Aligned_cols=213 Identities=35% Similarity=0.566 Sum_probs=181.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCC--CCHHHHhcc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT--LNLRSLRRK 1083 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~--i~~~~lR~~ 1083 (1253)
|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2469999999999999999999999999999999999999999999999999852 234567899
Q ss_pred eEEEccCC--CcccccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1084 IGLVQQEP--ALFSTTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1084 i~~V~Qdp--~Lf~gTIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
|+|+||+| .+|+.|++||+.++.. ..+. +++.++++..++.++. .....+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFE-----------NKPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhh-----------cCChhhCCHHHHHHHHH
Confidence 99999998 4788999999986421 1222 2344555555554332 22345799999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhh
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~ 1231 (1253)
||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999875 48899999999999875 99999999999999999999876
No 371
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.6e-41 Score=371.50 Aligned_cols=217 Identities=31% Similarity=0.553 Sum_probs=182.3
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCC--CHHHHhccc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL--QLKWLREQM 454 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~--~~~~~r~~i 454 (1253)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +..++++.+
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999974 3499999999999999999999999999999999999999999999999998764 345678899
Q ss_pred EEEeccCccCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000851 455 GLVSQEPALFA-TSIANNILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVL 530 (1253)
Q Consensus 455 ~~v~Q~~~lf~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~ 530 (1253)
+|++|++.++. .|++||+.++.. ..+.++..+ .+.+.++.+ |++.........||||||||++||||++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~ 152 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARALA 152 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHHh
Confidence 99999998886 599999987631 112221111 112333333 4444455566789999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 531 RNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 531 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
.+|+++||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 153 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 153 VKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 9999999999999999999999999999875 47999999999999865 899999999999999998887653
No 372
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-41 Score=374.18 Aligned_cols=220 Identities=26% Similarity=0.465 Sum_probs=187.3
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
++++|++++|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+..++++.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999974 349999999999999999999999999999999999999999999999999988777788889999
Q ss_pred EeccCccCcc-cHHHHHhcCCCC----------CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 000851 457 VSQEPALFAT-SIANNILLGKED----------ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 525 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~~----------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriai 525 (1253)
++|++.++.+ |+.||+.++... ...+++.++++..++.+.. ...+..||||||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLA-----------DRRLTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHH-----------cCCcccCCHHHHHHHHH
Confidence 9999998876 999999986321 0122344555555544333 34456899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 526 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 526 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
|||++.+|++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+.+++...
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~- 228 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP- 228 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH-
Confidence 999999999999999999999999999999999875 47899999999999865 899999999999999999888653
Q ss_pred chHHHHH
Q 000851 604 GEYAALV 610 (1253)
Q Consensus 604 ~~y~~~~ 610 (1253)
..+.+.+
T Consensus 229 ~~~~~~~ 235 (255)
T PRK11231 229 GLLRTVF 235 (255)
T ss_pred HHHHHHh
Confidence 3334443
No 373
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=7.8e-41 Score=366.85 Aligned_cols=204 Identities=30% Similarity=0.472 Sum_probs=173.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH---HHhc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLRR 1082 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~---~lR~ 1082 (1253)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 34699999999999999999999999999999999999999999999999999877654 3688
Q ss_pred ceEEEccCCCcc-cccHHHHhccCC--CCCCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1083 KIGLVQQEPALF-STTIYENIKYGN--EDASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1083 ~i~~V~Qdp~Lf-~gTIreNl~~g~--~~~~d~----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
+++|+||+|.+| ..|++||+.++. ...+++ ++.++++..++.+... ....+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAK-----------NFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCchhCCHHHHHHHHH
Confidence 999999999874 679999998752 112222 3445555555544433 3346799999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEE
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAE 1222 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive 1222 (1253)
||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999874 47899999999999976 99999999999863
No 374
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-41 Score=367.56 Aligned_cols=204 Identities=34% Similarity=0.517 Sum_probs=172.4
Q ss_pred EEEEEEEEECCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 377 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 377 i~~~~v~f~y~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
|+++|++++|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997421 349999999999999999999999999999999999999999999999998863 35789
Q ss_pred EEEeccCccCc-ccHHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHH
Q 000851 455 GLVSQEPALFA-TSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIAR 527 (1253)
Q Consensus 455 ~~v~Q~~~lf~-~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiAR 527 (1253)
+||+|++.+|. .|++||+.++... .. .+++.++++..++.++. .....+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFE-----------NAYPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hCCcccCCHHHHHHHHHHH
Confidence 99999999987 5999999875321 11 23344445555444433 3444689999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEe--CCEEEEeeCc
Q 000851 528 AVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLK--NGQVVESGTH 596 (1253)
Q Consensus 528 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~--~G~i~~~g~~ 596 (1253)
||+.+|+++||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||++++|+ +|+++++++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999874 37899999999998765 89999999 7999998864
No 375
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.1e-41 Score=364.99 Aligned_cols=201 Identities=36% Similarity=0.636 Sum_probs=170.5
Q ss_pred EEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEE
Q 000851 378 EFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLV 457 (1253)
Q Consensus 378 ~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 457 (1253)
+++|++++|++....+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.|+|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 36899999975223499999999999999999999999999999999999999999999999999877777888899999
Q ss_pred eccCc--cCcccHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 458 SQEPA--LFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 458 ~Q~~~--lf~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
+|++. +++.|++||+.++... ... +++.+.++..++. ........+||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLE-----------GLRDRSPFTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcH-----------hhhcCCcccCCHHHHHHHHHHHHH
Confidence 99983 5678999999875321 111 2233344444433 334455578999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQ 589 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~ 589 (1253)
+.+|++|||||||++||+.+.+.+.+.|.++. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999999885 47899999999999987 89999999985
No 376
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=370.67 Aligned_cols=204 Identities=31% Similarity=0.464 Sum_probs=176.4
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++.++
T Consensus 12 ~l~i~~l~~~~~~~--~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i~ 84 (257)
T PRK11247 12 PLLLNAVSKRYGER--TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDTR 84 (257)
T ss_pred cEEEEEEEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCceE
Confidence 59999999999753 4999999999999999999999999999999999999999999999998763 4577899
Q ss_pred EEeccCccCc-ccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000851 456 LVSQEPALFA-TSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPK 534 (1253)
Q Consensus 456 ~v~Q~~~lf~-~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ 534 (1253)
|++|++.+|+ .|++||+.++......+++.++++..++.+. ....+.+||||||||++|||||+++|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADR-----------ANEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999987 5999999986432223455555655555443 344557899999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcc
Q 000851 535 ILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHV 597 (1253)
Q Consensus 535 ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 597 (1253)
+|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999999999874 37899999999999865 8999999999999988754
No 377
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=7.1e-41 Score=382.64 Aligned_cols=212 Identities=22% Similarity=0.430 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
++++|++++|+ +..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++
T Consensus 3 l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 78999999996 3469999999999999999999999999999999999999999999999999876 4567889999
Q ss_pred EEccCCCcccc-cHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFST-TIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|+||+|.+|++ |++||+.+... ..+. +++.++++..+ ++........+||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVG-----------LRPEQHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCC-----------CchHhcCchhhCCHHHHHHHHHHHH
Confidence 99999999976 99999975321 1121 23333343333 4444445567899999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
|+++|++|||||||++||+.+.+.+++.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999998778999999999999876 999999999999999999999763
No 378
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-41 Score=373.89 Aligned_cols=225 Identities=32% Similarity=0.516 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC-----ccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI-----SGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~-----~G~I~idG~di~~--i~~ 1077 (1253)
-++++||+++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYG---DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEEC---CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 388999999996 346999999999999999999999999999999999999874 8999999999875 345
Q ss_pred HHHhcceEEEccCCCccc-ccHHHHhccCCC--CC-CHHHHHH----HHHHhcHHHHHHhCCCCccccccCCCCCCChhH
Q 000851 1078 RSLRRKIGLVQQEPALFS-TTIYENIKYGNE--DA-SEIELMK----ATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 1149 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~-~d~ei~~----al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQ 1149 (1253)
..+|++++|++|++.+|+ .|++||+.++.. .. .+++..+ .++..++.+.+ ++.++. ...+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKT----PATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcC----CcccCCHHH
Confidence 578899999999999998 499999986421 11 2222222 23333332221 223333 356799999
Q ss_pred HHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhH
Q 000851 1150 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1228 (1253)
Q Consensus 1150 kQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~e 1228 (1253)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999976 99999999999999999999
Q ss_pred HhhcccchHHH
Q 000851 1229 LLRKENGIYKQ 1239 (1253)
Q Consensus 1229 Ll~~~~g~y~~ 1239 (1253)
++..+...+..
T Consensus 234 ~~~~~~~~~~~ 244 (252)
T PRK14272 234 LFTNPRDERTE 244 (252)
T ss_pred HHhCcCcHHHH
Confidence 98755444443
No 379
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-41 Score=374.72 Aligned_cols=222 Identities=29% Similarity=0.503 Sum_probs=188.4
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC-----ccEEEECCccCCC--CC
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI-----SGTVLIDGYDIRT--LN 1076 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~-----~G~I~idG~di~~--i~ 1076 (1253)
+.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 35999999999963 35999999999999999999999999999999999999985 8999999999853 34
Q ss_pred HHHHhcceEEEccCCCcccccHHHHhccCC------CCCC-HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhH
Q 000851 1077 LRSLRRKIGLVQQEPALFSTTIYENIKYGN------EDAS-EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQ 1149 (1253)
Q Consensus 1077 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~------~~~~-d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQ 1149 (1253)
...+|+.++|+||++.+|+.|++||+.++. +... ++.+.++++..++.+++.. ..+..+..|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 567889999999999999999999998642 1111 2335566666666544432 2345567899999
Q ss_pred HHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeC-----CEEE
Q 000851 1150 KQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQ-----GKVA 1221 (1253)
Q Consensus 1150 kQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~-----G~iv 1221 (1253)
|||++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999853 48999999999999865 999999999 9999
Q ss_pred EecChhHHhhcccc
Q 000851 1222 EIGSHEQLLRKENG 1235 (1253)
Q Consensus 1222 e~Gt~~eLl~~~~g 1235 (1253)
+.|+++++...+..
T Consensus 236 ~~~~~~~~~~~~~~ 249 (261)
T PRK14258 236 EFGLTKKIFNSPHD 249 (261)
T ss_pred EeCCHHHHHhCCCC
Confidence 99999999864443
No 380
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=9.3e-41 Score=367.97 Aligned_cols=208 Identities=29% Similarity=0.428 Sum_probs=177.4
Q ss_pred cEEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---H
Q 000851 1005 NIELRNVSFKYPVRPD-ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS---L 1080 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~---l 1080 (1253)
.|+++||+++|+.... .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999974211 35999999999999999999999999999999999999999999999999998877653 3
Q ss_pred -hcceEEEccCCCcccc-cHHHHhccCC--CCC----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000851 1081 -RRKIGLVQQEPALFST-TIYENIKYGN--EDA----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1081 -R~~i~~V~Qdp~Lf~g-TIreNl~~g~--~~~----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQr 1152 (1253)
+++++|+||+|.+|+. |++||+.++. ... ..+++.++++..++.++..+. ...||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHL-----------PAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHH
Confidence 3689999999999875 9999997631 111 123456666666665554433 35799999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-C-CceEEEEccCchhhhccCEEEEEeCCEEEEe
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-E-GRTTIMVAHRLSTIRNADKIAVLQQGKVAEI 1223 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~-~~TvI~IaHrl~ti~~~D~I~Vl~~G~ive~ 1223 (1253)
++|||||+++|++|||||||++||+.+.+.+.+.|++.. + ++|||+|||+++.+..||++++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999999874 3 7899999999999988999999999999874
No 381
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=375.16 Aligned_cols=219 Identities=30% Similarity=0.494 Sum_probs=185.4
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCC--CCH
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQL 447 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 447 (1253)
..|+++||+++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 12 ~~l~i~nl~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~ 89 (269)
T PRK14259 12 IIISLQNVTISYGTF--EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDP 89 (269)
T ss_pred ceEEEEeEEEEECCE--EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCH
Confidence 359999999999743 49999999999999999999999999999999999987 699999999999863 456
Q ss_pred HHHhcccEEEeccCccCcccHHHHHhcCCCCC--C---HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 448 KWLREQMGLVSQEPALFATSIANNILLGKEDA--S---MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 448 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
..+|+.|+||+|++.+|..|++||+.++.... . .+++.++++..++.. +.+........+||||||||
T Consensus 90 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~qr 162 (269)
T PRK14259 90 VEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-------ECKDKLNESGYSLSGGQQQR 162 (269)
T ss_pred HHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-------hhhhhhCCCcccCCHHHHHH
Confidence 67888999999999999889999999864321 1 223344444444322 22334556677899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeC-----------CEE
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKN-----------GQV 590 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~-----------G~i 590 (1253)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++ |++
T Consensus 163 l~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~ 242 (269)
T PRK14259 163 LCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYL 242 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceE
Confidence 99999999999999999999999999999999999998778999999999998865 899999996 679
Q ss_pred EEeeCcchhhhc
Q 000851 591 VESGTHVDLISK 602 (1253)
Q Consensus 591 ~~~g~~~~l~~~ 602 (1253)
++.|+.+++...
T Consensus 243 ~~~~~~~~~~~~ 254 (269)
T PRK14259 243 VEFNETKKIFNS 254 (269)
T ss_pred EEeCCHHHHHhC
Confidence 999999888654
No 382
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=376.21 Aligned_cols=218 Identities=28% Similarity=0.468 Sum_probs=183.1
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCC--CCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~ 448 (1253)
-|+++|++|+|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5899999999974 349999999999999999999999999999999999864 799999999999864 3445
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCCC---C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.++++++|++|++.+|+.|++||+.++.... . .+.+.++++..++.+ +.....+..+.+|||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWD-------EVKDRLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCc-------chHHHHhcCcccCCHHHHH
Confidence 6788999999999999999999998753211 1 122334444443321 1112345667799999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778899999999998865 8999999999999999998886
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 252 ~~ 253 (268)
T PRK14248 252 TS 253 (268)
T ss_pred hC
Confidence 54
No 383
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=374.38 Aligned_cols=220 Identities=30% Similarity=0.467 Sum_probs=187.4
Q ss_pred CCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCC--CC
Q 000851 374 AGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQ 446 (1253)
Q Consensus 374 ~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 446 (1253)
...|+++|++|+|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 18 ~~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 18 EIALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred CeEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 346999999999964 349999999999999999999999999999999999997 589999999999864 34
Q ss_pred HHHHhcccEEEeccCccCcccHHHHHhcCCCCC---C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHH
Q 000851 447 LKWLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 519 (1253)
Q Consensus 447 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 519 (1253)
...+|+.|+||+|++.+|..|++||+.++.... . .+++.++++..++.+++ ++..+..+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-------KDDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-------hhhhcCCcccCCHHH
Confidence 556788999999999999899999998863211 1 12344445555443332 234566778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcch
Q 000851 520 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVD 598 (1253)
Q Consensus 520 ~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 598 (1253)
|||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999998855 89999999999999999998
Q ss_pred hhhc
Q 000851 599 LISK 602 (1253)
Q Consensus 599 l~~~ 602 (1253)
+...
T Consensus 249 ~~~~ 252 (267)
T PRK14237 249 IFTN 252 (267)
T ss_pred HhcC
Confidence 8654
No 384
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=7.5e-41 Score=376.44 Aligned_cols=222 Identities=30% Similarity=0.448 Sum_probs=183.3
Q ss_pred EEEEEEEEECCCC-------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH-
Q 000851 377 IEFSEVCFAYPSR-------PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK- 448 (1253)
Q Consensus 377 i~~~~v~f~y~~~-------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~- 448 (1253)
|+++||+|+|++. ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 23599999999999999999999999999999999999999999999999999876654
Q ss_pred --HHhcccEEEeccCc--cCc-ccHHHHHhcCCC---CCC----HHHHHHHHHHhCcHHHHhcCCCCcc-ccccCCCCCC
Q 000851 449 --WLREQMGLVSQEPA--LFA-TSIANNILLGKE---DAS----MDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEGGTQL 515 (1253)
Q Consensus 449 --~~r~~i~~v~Q~~~--lf~-~ti~~ni~~g~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~L 515 (1253)
.+|+.|+||+|++. ++. .|++||+.++.. ... .+++.++ ++.+ |++ ......+.+|
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~---------l~~~--gl~~~~~~~~~~~L 151 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAEL---------LDMV--GLRSEDADKLPRQL 151 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHH---------HHHc--CCChhhhhCChhhC
Confidence 36778999999983 443 599999975421 111 1223333 3333 443 2345667789
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000851 516 SGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVE 592 (1253)
Q Consensus 516 SgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~ 592 (1253)
|||||||++||||++.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999998853 7899999999999975 89999999999999
Q ss_pred eeCcchhhhcCc-hHHHH
Q 000851 593 SGTHVDLISKGG-EYAAL 609 (1253)
Q Consensus 593 ~g~~~~l~~~~~-~y~~~ 609 (1253)
.|+++++..... .++.+
T Consensus 232 ~g~~~~~~~~~~~~~~~~ 249 (265)
T TIGR02769 232 ECDVAQLLSFKHPAGRNL 249 (265)
T ss_pred ECCHHHHcCCCCHHHHHH
Confidence 999999987433 34334
No 385
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=367.05 Aligned_cols=209 Identities=34% Similarity=0.544 Sum_probs=183.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++||+++|+. . ..|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 789999999962 2 249999999999999999999999999999999999999999999999876654 357899
Q ss_pred EEccCCCcccc-cHHHHhccCC-CC-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFST-TIYENIKYGN-ED-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~-~~-----~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|+||++.+|.+ |++||+.++. +. ..++++.++++..++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999985 9999998642 11 12445777888888877666554 4799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999865 999999999999999999999863
No 386
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.8e-41 Score=363.26 Aligned_cols=201 Identities=33% Similarity=0.540 Sum_probs=174.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+. .. .|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|++++
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 578999999963 22 39999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEccCCCcccc-cHHHHhccCCC-C-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFST-TIYENIKYGNE-D-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~~-~-----~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|++|++.+|++ |++||+.++.. . .+++++.++++..++.++..+.| .+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 99999986532 1 12345677787777766655443 4799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEec
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1224 (1253)
|+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 37899999999999966 9999999999998765
No 387
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.5e-41 Score=370.98 Aligned_cols=211 Identities=28% Similarity=0.461 Sum_probs=179.4
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH-HhcccE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQMG 455 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i~ 455 (1253)
|+++||+++|++. ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQS--HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCCe--EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 4789999999743 4999999999999999999999999999999999999999999999999998776554 467899
Q ss_pred EEeccCccCcc-cHHHHHhcCCCCCC--HHH-HHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000851 456 LVSQEPALFAT-SIANNILLGKEDAS--MDR-VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 531 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~~~--~~~-~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~ 531 (1253)
|++|++.+|+. |++||+.++..... .++ ..++.+..+ +++........+||||||||++||||+++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999986 99999987643221 111 122222211 22333455667899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchh
Q 000851 532 NPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 532 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 599 (1253)
+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|+++++|++++.|+++++
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999999999998764 7899999999999986 899999999999999999887
No 388
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=376.03 Aligned_cols=219 Identities=31% Similarity=0.498 Sum_probs=186.9
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCC--CCH
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQL 447 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 447 (1253)
+.|+++|++|+|+++ .+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 24 ~~l~~~nl~~~~~~~--~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~ 101 (272)
T PRK14236 24 TALEVRNLNLFYGDK--QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDV 101 (272)
T ss_pred cEEEEEEEEEEECCe--eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCH
Confidence 469999999999743 499999999999999999999999999999999999984 89999999999864 345
Q ss_pred HHHhcccEEEeccCccCcccHHHHHhcCCCC--C-C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHH
Q 000851 448 KWLREQMGLVSQEPALFATSIANNILLGKED--A-S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 520 (1253)
Q Consensus 448 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~ 520 (1253)
.++|+.++|++|++.+|+.|++||+.++... . . .+++.++++..++.+++ .+..+..+.+||||||
T Consensus 102 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 174 (272)
T PRK14236 102 AELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-------KDRLHENAFGLSGGQQ 174 (272)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-------HHHhhCCcccCCHHHH
Confidence 6778899999999999988999999875321 1 1 12344455555443322 2345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchh
Q 000851 521 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 521 qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 599 (1253)
||++||||++++|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 175 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 175 QRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 899999999999999999888
Q ss_pred hhc
Q 000851 600 ISK 602 (1253)
Q Consensus 600 ~~~ 602 (1253)
...
T Consensus 255 ~~~ 257 (272)
T PRK14236 255 FTS 257 (272)
T ss_pred hcC
Confidence 654
No 389
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-41 Score=390.53 Aligned_cols=200 Identities=33% Similarity=0.557 Sum_probs=172.9
Q ss_pred ccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHH----hcccEEEeccCccCcc-c
Q 000851 393 VFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL----REQMGLVSQEPALFAT-S 467 (1253)
Q Consensus 393 ~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~lf~~-t 467 (1253)
+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+ +++|+||+|++.+|.. |
T Consensus 43 ~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~T 122 (400)
T PRK10070 43 GVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMT 122 (400)
T ss_pred EEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCC
Confidence 7999999999999999999999999999999999999999999999999988776543 4579999999999965 9
Q ss_pred HHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCc
Q 000851 468 IANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEA 541 (1253)
Q Consensus 468 i~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ 541 (1253)
++||+.++... .. .+++.++++..++.++..+ ...+||||||||++|||||+.+|++||||||
T Consensus 123 v~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~-----------~~~~LSgGq~QRv~LArAL~~~P~iLLLDEP 191 (400)
T PRK10070 123 VLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS-----------YPDELSGGMRQRVGLARALAINPDILLMDEA 191 (400)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhc-----------CcccCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 99999986321 11 2344555555555444444 4458999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 542 TSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 542 ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
||+||+.+.+.+++.|.++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 192 ts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~ 256 (400)
T PRK10070 192 FSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNP 256 (400)
T ss_pred CccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCc
Confidence 99999999999999999874 47899999999999865 8999999999999999999987653
No 390
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=369.90 Aligned_cols=216 Identities=27% Similarity=0.503 Sum_probs=179.8
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCC------CCCHHHH
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK------SLQLKWL 450 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~------~~~~~~~ 450 (1253)
++++|++++|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+
T Consensus 3 l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 3 IQLNGINCFYGAH--QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEeeEEEECCe--eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 7899999999753 4999999999999999999999999999999999999999999999999873 1234567
Q ss_pred hcccEEEeccCccCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 451 REQMGLVSQEPALFAT-SIANNILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 451 r~~i~~v~Q~~~lf~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
|++|+|++|++.+|.. |++||+.++.. ....++..+ .+.++++.+ |++........+||||||||++||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la 153 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALA-----RAEKLLERL--RLKPYADRFPLHLSGGQQQRVAIA 153 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHH
Confidence 8899999999999975 99999975311 111111111 122333333 444445555678999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
||++.+|+++||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 154 ral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 154 RALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 99999999999999999999999999999999875 47999999999999865 89999999999999999887653
No 391
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1e-40 Score=371.04 Aligned_cols=221 Identities=24% Similarity=0.449 Sum_probs=184.7
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH-HhcccE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQMG 455 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i~ 455 (1253)
|+++|++++|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.++
T Consensus 3 i~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDGF--KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCCe--EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 7899999999743 4999999999999999999999999999999999999999999999999988776554 355799
Q ss_pred EEeccCccCcc-cHHHHHhcCCCCCC-H-HH---HHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 456 LVSQEPALFAT-SIANNILLGKEDAS-M-DR---VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~~~-~-~~---~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
|++|++.+|++ |++||+.++..... . .. .........+.+.++.+ |++........+||||||||++||||+
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~laral 158 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGMLL 158 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999999986 99999988642100 0 00 00000111223444444 555555667789999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 159 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 159 MQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred hcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 9999999999999999999999999999998778999999999999975 89999999999999999988764
No 392
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-41 Score=357.52 Aligned_cols=221 Identities=33% Similarity=0.583 Sum_probs=194.1
Q ss_pred cEEEEEEEEECCCCCC----------------------cccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCc
Q 000851 376 QIEFSEVCFAYPSRPH----------------------MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSG 433 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~----------------------~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 433 (1253)
.|+++||++-|+.++. .-++|+||+|+.||+..|.|-||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 5889999988864321 147899999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHh----cccEEEeccCccCc-ccHHHHHhcCCCCC------CHHHHHHHHHHhCcHHHHhcCCC
Q 000851 434 KILLDGHDLKSLQLKWLR----EQMGLVSQEPALFA-TSIANNILLGKEDA------SMDRVIEAAKAANAHSFVEGLPD 502 (1253)
Q Consensus 434 ~i~~~g~~~~~~~~~~~r----~~i~~v~Q~~~lf~-~ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~ 502 (1253)
+|++||.|+..++.++|| +++++|+|+..||+ .||.||..||.+-. ..+...++++.+++++|-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999987764 47999999999986 49999999997532 23456677888888888877775
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-c
Q 000851 503 GYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-V 579 (1253)
Q Consensus 503 g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~ 579 (1253)
+||||+|||+.|||||..||+||++|||+|||||--+..+|+.|.++.+ .||+++|||++++.-+ .
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 8999999999999999999999999999999999999999999988753 6999999999998655 6
Q ss_pred CEEEEEeCCEEEEeeCcchhhhcCc-hHH
Q 000851 580 DTIMVLKNGQVVESGTHVDLISKGG-EYA 607 (1253)
Q Consensus 580 d~i~vl~~G~i~~~g~~~~l~~~~~-~y~ 607 (1253)
|||..|++|+|++.||++|++.++. .|-
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV 261 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYV 261 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHH
Confidence 9999999999999999999988743 343
No 393
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=376.05 Aligned_cols=213 Identities=30% Similarity=0.468 Sum_probs=179.9
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCC--CCCHHHHhccc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLK--SLQLKWLREQM 454 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~r~~i 454 (1253)
|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. +.+...+|++|
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 689999999974 34999999999999999999999999999999999999999999999999985 33445678899
Q ss_pred EEEeccCc--cCcccHHHHHhcCCC--CCCHH----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 455 GLVSQEPA--LFATSIANNILLGKE--DASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 455 ~~v~Q~~~--lf~~ti~~ni~~g~~--~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
+||+|++. ++..|+.+|+.++.. ..+.+ ++.++++..++.++. .....+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-----------HQPIQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-----------cCCchhCCHHHHHHHHHH
Confidence 99999985 567799999987521 11222 233444444443332 334568999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999875 47899999999999865 899999999999999999887654
No 394
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=373.04 Aligned_cols=218 Identities=29% Similarity=0.475 Sum_probs=183.3
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccC--CC---CCcEEEECCeeCCCC--CHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLY--EP---TSGKILLDGHDLKSL--QLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~---~~G~i~~~g~~~~~~--~~~ 448 (1253)
-++++||+++|+++ .+|+|+||+|++||+++|+||||||||||+++|+|++ .| ++|+|.++|+++... +..
T Consensus 5 ~l~~~~l~~~~~~~--~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNKK--KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECCe--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 48999999999743 4999999999999999999999999999999999995 46 599999999998643 345
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCC--C-C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKED--A-S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.+|+.++||+|++.+|+.|++||+.++... . . .+++.++++..++.+.+ .+..+..+.+|||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEV-------KDRLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhH-------HHHHhcCcccCCHHHHH
Confidence 678899999999999999999999875311 1 1 12333344444433222 23445667789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999998765 8999999999999999999986
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
+.
T Consensus 236 ~~ 237 (252)
T PRK14239 236 MN 237 (252)
T ss_pred hC
Confidence 54
No 395
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-41 Score=364.25 Aligned_cols=201 Identities=25% Similarity=0.518 Sum_probs=170.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
++++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+|++++
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 47899999996 3469999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEccCCCcccc-cHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFST-TIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|+||++.+|++ |++||+.++.. ..+ ++++.++++..++ +........+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLEL-----------SEYANKRVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCC-----------hHHHhCcHhhCCHHHHHHHHHHHH
Confidence 99999999875 99999976421 111 1233344444443 333344556899999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEec
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1224 (1253)
|+++|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999999999999864 47899999999999865 9999999999998865
No 396
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.6e-40 Score=373.86 Aligned_cols=229 Identities=28% Similarity=0.460 Sum_probs=189.3
Q ss_pred cEEEEeEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH
Q 000851 1005 NIELRNVSFKYPVR------PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR 1078 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~ 1078 (1253)
.|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999998765666
Q ss_pred HHhcceEEEccCCC--ccc-ccHHHHhccCC---CCC----CHHHHHHHHHHhcHH-HHHHhCCCCccccccCCCCCCCh
Q 000851 1079 SLRRKIGLVQQEPA--LFS-TTIYENIKYGN---EDA----SEIELMKATKAANAH-GFISRMPEGYQSHVGDRGVQLSG 1147 (1253)
Q Consensus 1079 ~lR~~i~~V~Qdp~--Lf~-gTIreNl~~g~---~~~----~d~ei~~al~~a~l~-~~I~~lp~gldt~vge~G~~LSg 1147 (1253)
..+++++|+||+|. +++ -|+.+|+.+.. ... .++++.++++..++. +... ....+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHAS-----------YYPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHh-----------cCchhcCH
Confidence 66788999999985 444 38899986421 111 123456667776662 2222 22357999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEec
Q 000851 1148 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1148 GQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~G 1224 (1253)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998753 7899999999999986 9999999999999999
Q ss_pred ChhHHhhcc-cchHHHHHHHh
Q 000851 1225 SHEQLLRKE-NGIYKQLIRLQ 1244 (1253)
Q Consensus 1225 t~~eLl~~~-~g~y~~L~~~~ 1244 (1253)
+++++.+.+ ...+++++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhc
Confidence 999998743 34566777644
No 397
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=367.59 Aligned_cols=218 Identities=25% Similarity=0.418 Sum_probs=181.0
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH-HHhccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK-WLREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~-~~r~~i 454 (1253)
-|+++|++++|+++ .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..++.+
T Consensus 5 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGKI--QALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCCc--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 38999999999743 499999999999999999999999999999999999999999999999999877754 467789
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 455 GLVSQEPALFAT-SIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
+|++|++.+|.. |++||+.++......++..+.+ .+.+..++. ++........+||||||||++||||++.+|
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~~-l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFPR-LHERRIQRAGTMSGGEQQMLAIGRALMSQP 156 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHHH-HHHHHhCchhhCCHHHHHHHHHHHHHHhCC
Confidence 999999999985 9999998864322222222211 111222211 111223456789999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 534 KILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
+||||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 157 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 157 RLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 9999999999999999999999999875 48999999999997754 89999999999999999998864
No 398
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.3e-40 Score=365.45 Aligned_cols=209 Identities=29% Similarity=0.498 Sum_probs=180.1
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
-|+++||++.|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 7 ~i~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGDA--KILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCCc--eeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 48999999999743 4999999999999999999999999999999999999999999999999998888877888999
Q ss_pred EEeccCccCcccHHHHHhcCCC---CC-CHHHHHHHHHHhCcHHHHhcCCCCcc-ccccCCCCCCChHHHHHHHHHHHhc
Q 000851 456 LVSQEPALFATSIANNILLGKE---DA-SMDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEGGTQLSGGQKQRIAIARAVL 530 (1253)
Q Consensus 456 ~v~Q~~~lf~~ti~~ni~~g~~---~~-~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgGq~qriaiARal~ 530 (1253)
|++|++.+|+.|++||+.++.. .. ..+++.+ .++.+ |+. +.....+.+||||||||++|||||+
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~---------~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLD---------DLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHH---------HHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999998899999986421 11 1122223 33333 342 3456667899999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhhcCEEEEEe-CCEEEEeeCcc
Q 000851 531 RNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRDVDTIMVLK-NGQVVESGTHV 597 (1253)
Q Consensus 531 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~-~G~i~~~g~~~ 597 (1253)
++|+++||||||++||+.+.+.+.+.|+++. .++|+|++||+++.++.||++++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999999875 3789999999999998899999995 67778889885
No 399
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.1e-40 Score=370.53 Aligned_cols=217 Identities=30% Similarity=0.534 Sum_probs=181.9
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCC--------HH
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQ--------LK 448 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--------~~ 448 (1253)
++++||+++|+++ .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ..
T Consensus 4 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (250)
T PRK11264 4 IEVKNLVKKFHGQ--TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIR 81 (250)
T ss_pred EEEeceEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHH
Confidence 8899999999743 4999999999999999999999999999999999999999999999999986432 34
Q ss_pred HHhcccEEEeccCccCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 449 WLREQMGLVSQEPALFA-TSIANNILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
.+|+.++||+|++.+|+ .|++||+.++.. ....++..+. +.+.++.+ |++......+.+||||||||++
T Consensus 82 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv~ 154 (250)
T PRK11264 82 QLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATAR-----ARELLAKV--GLAGKETSYPRRLSGGQQQRVA 154 (250)
T ss_pred HhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCcchhhCChhhCChHHHHHHH
Confidence 56788999999999886 599999987421 1122211111 12333333 4444455667899999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||||++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 155 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 234 (250)
T PRK11264 155 IARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFAD 234 (250)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999875 47899999999999865 899999999999999999887654
No 400
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=372.99 Aligned_cols=218 Identities=31% Similarity=0.495 Sum_probs=183.4
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCC--CCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~ 448 (1253)
.|+++|++|+|++. ++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+..
T Consensus 4 ~l~~~~l~~~~~~~--~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGNY--EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 48999999999743 49999999999999999999999999999999999997 489999999999854 3445
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCCC---C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.+|+.++|++|++.+|+.|++||+.++.... . .+++.++++..++++. ........+.+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKE-------TKDNLDRNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcc-------hHHHhccChhhCCHHHHH
Confidence 6788899999999999999999998763211 1 1233344444443211 112234566799999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++++|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999865 8999999999999999999886
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 235 ~~ 236 (251)
T PRK14251 235 IA 236 (251)
T ss_pred hC
Confidence 54
No 401
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-41 Score=372.90 Aligned_cols=218 Identities=30% Similarity=0.496 Sum_probs=183.2
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcc---CCC--CCcEEEECCeeCCCC--CHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRL---YEP--TSGKILLDGHDLKSL--QLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~---~~~--~~G~i~~~g~~~~~~--~~~ 448 (1253)
.|+++|+++.|++ ..+|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.++|+++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 4889999999974 3499999999999999999999999999999999997 454 599999999998653 345
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCCC---C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.+|+.|+|++|++.+|+.|++||+.++.... . .+++.++++..++.++ ..+.....+.+|||||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDE-------VKDKLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcc-------hhhhhhCCcccCCHHHHH
Confidence 6788999999999999889999998753211 1 1223344444433222 223455677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999855 8999999999999999999986
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 234 ~~ 235 (250)
T PRK14245 234 TN 235 (250)
T ss_pred cC
Confidence 54
No 402
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=372.28 Aligned_cols=221 Identities=32% Similarity=0.521 Sum_probs=185.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC--C---CccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD--P---ISGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~--p---~~G~I~idG~di~~--i~~ 1077 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999973 469999999999999999999999999999999999975 4 58999999999864 344
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCC--CC-C----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNE--DA-S----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~-~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
..+|++++|+||++.+|+.|+++|+.++.. .. . ++++.++++.+++.+.+ .........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEV-------KDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccch-------hhHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1 22344455555443222 2233445578999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767899999999999865 999999999999999999998
Q ss_pred hhcccc
Q 000851 1230 LRKENG 1235 (1253)
Q Consensus 1230 l~~~~g 1235 (1253)
...+..
T Consensus 235 ~~~~~~ 240 (252)
T PRK14255 235 FLNPKE 240 (252)
T ss_pred hcCCCC
Confidence 864443
No 403
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=9.1e-41 Score=385.07 Aligned_cols=213 Identities=30% Similarity=0.506 Sum_probs=181.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+ +..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ..+|++|
T Consensus 41 ~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 499999999996 346999999999999999999999999999999999999999999999999987654 5678999
Q ss_pred EEEccCCCcc-cccHHHHhccCCC--CCCHHHHH----HHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALF-STTIYENIKYGNE--DASEIELM----KATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf-~gTIreNl~~g~~--~~~d~ei~----~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
+|+||++.+| ..|++||+.+... ..+..+.. ++++.. .+++..++.+ .+||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~-------~L~~~~~~~~----~~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFA-------RLESKADARV----SDLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-------CCchhhCCCh----hhCCHHHHHHHHHHH
Confidence 9999999987 4699999975321 12222222 222222 2344445554 469999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
||+.+|++|||||||++||+.+.+.+++.|+++. +|+|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999875 48999999999999966 999999999999999999999763
No 404
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=372.35 Aligned_cols=220 Identities=33% Similarity=0.503 Sum_probs=187.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC-----CccEEEECCccCCC--CCH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP-----ISGTVLIDGYDIRT--LNL 1077 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p-----~~G~I~idG~di~~--i~~ 1077 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 20 ~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 6999999999973 4699999999999999999999999999999999999864 58999999999864 344
Q ss_pred HHHhcceEEEccCCCcccccHHHHhccCCCC-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHH
Q 000851 1078 RSLRRKIGLVQQEPALFSTTIYENIKYGNED-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~-----~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQr 1152 (1253)
..+|++|+|+||++.+|+.|+.+|+.++... ..++++.++++.+++.+++.. ........||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHHH
Confidence 5678999999999999999999999875311 123345566666666544432 2334556899999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEEEEEe---------CCEEEE
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKIAVLQ---------QGKVAE 1222 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~---------~G~ive 1222 (1253)
++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998778999999999999865 99999997 899999
Q ss_pred ecChhHHhhccc
Q 000851 1223 IGSHEQLLRKEN 1234 (1253)
Q Consensus 1223 ~Gt~~eLl~~~~ 1234 (1253)
.|+++++...+.
T Consensus 250 ~g~~~~~~~~~~ 261 (274)
T PRK14265 250 FSPTEQMFGSPQ 261 (274)
T ss_pred eCCHHHHHhCCC
Confidence 999999986443
No 405
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=377.98 Aligned_cols=223 Identities=27% Similarity=0.490 Sum_probs=181.8
Q ss_pred CCcEEEEEEEEECCCCC---CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCC----C-
Q 000851 374 AGQIEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS----L- 445 (1253)
Q Consensus 374 ~~~i~~~~v~f~y~~~~---~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~- 445 (1253)
.+.|+++|++++|+++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999997532 249999999999999999999999999999999999999999999999999852 2
Q ss_pred CHHHHhcccEEEeccC--ccCcccHHHHHhcCCCC--CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 446 QLKWLREQMGLVSQEP--ALFATSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 446 ~~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
+...+|+.|+||+|++ .+|..|++||+.++... ...++..+.+. .+.+.+ .+|++ .....+.+|||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~--~ll~~~-~L~~~---~~~~~~~~LS~Gq~q 157 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVP--ELLKLV-QLPED---YVKRSPFELSGGQKR 157 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHH--HHHHHc-CCChh---HhcCChhhCCHHHHH
Confidence 3456788999999998 46778999999886421 22222221111 111111 23222 334566789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcch
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVD 598 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 598 (1253)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 158 rv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 237 (289)
T PRK13645 158 RVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFE 237 (289)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999875 37899999999998765 89999999999999999888
Q ss_pred hhhc
Q 000851 599 LISK 602 (1253)
Q Consensus 599 l~~~ 602 (1253)
+...
T Consensus 238 ~~~~ 241 (289)
T PRK13645 238 IFSN 241 (289)
T ss_pred HhcC
Confidence 7653
No 406
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=370.70 Aligned_cols=216 Identities=26% Similarity=0.494 Sum_probs=183.8
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH-HhcccE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQMG 455 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i~ 455 (1253)
++++|++++|+++ .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .|+.++
T Consensus 4 l~~~~l~~~~~~~--~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 81 (241)
T PRK10895 4 LTAKNLAKAYKGR--RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIG 81 (241)
T ss_pred EEEeCcEEEeCCE--EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeE
Confidence 7899999999743 4999999999999999999999999999999999999999999999999998776543 577899
Q ss_pred EEeccCccCcc-cHHHHHhcCCCC---CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000851 456 LVSQEPALFAT-SIANNILLGKED---ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 531 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~ 531 (1253)
|++|++.+|.. |++||+.++... .+.++. ...+.+.++.+ |++........+||||||||++||||++.
T Consensus 82 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 154 (241)
T PRK10895 82 YLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALAA 154 (241)
T ss_pred EeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHhc
Confidence 99999998875 999999875321 111111 11223445554 55555666778999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 532 NPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 532 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
+|++|||||||++||+.+.+.+.+.+.++. +++|+|++||+++.+.. ||++++|++|++++.|++++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 155 NPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 999999999999999999999999998875 48999999999987755 89999999999999999988764
No 407
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=376.66 Aligned_cols=220 Identities=30% Similarity=0.537 Sum_probs=181.9
Q ss_pred cEEEEEEEEECCCCC---CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCC----CHH
Q 000851 376 QIEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL----QLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~---~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~ 448 (1253)
.|+++|++++|++.. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997421 3499999999999999999999999999999999999999999999999998643 245
Q ss_pred HHhcccEEEeccC--ccCcccHHHHHhcCCC--CCCHHHHHHHHHHhCcHHHHhcCCCCcc-ccccCCCCCCChHHHHHH
Q 000851 449 WLREQMGLVSQEP--ALFATSIANNILLGKE--DASMDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEGGTQLSGGQKQRI 523 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~--~lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgGq~qri 523 (1253)
..++.|+|++|+| .+|..|++||+.++.. ..+.++..+. +.+.++.+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEK-----ALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6778899999998 5777899999987532 1222222111 12233333 443 234556678999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 524 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 524 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999885 47899999999999865 89999999999999999988765
Q ss_pred c
Q 000851 602 K 602 (1253)
Q Consensus 602 ~ 602 (1253)
.
T Consensus 235 ~ 235 (287)
T PRK13641 235 D 235 (287)
T ss_pred C
Confidence 3
No 408
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.1e-40 Score=367.77 Aligned_cols=211 Identities=35% Similarity=0.540 Sum_probs=174.0
Q ss_pred EEEEEEEEECCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCH---HHHh
Q 000851 377 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL---KWLR 451 (1253)
Q Consensus 377 i~~~~v~f~y~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r 451 (1253)
|+++||+++|++.. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999997531 249999999999999999999999999999999999999999999999999987763 5678
Q ss_pred cccEEEeccC--ccC-cccHHHHHhcCCC----CCCHHHHHHHHHHhCcHHHHhcCCCCcc-ccccCCCCCCChHHHHHH
Q 000851 452 EQMGLVSQEP--ALF-ATSIANNILLGKE----DASMDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEGGTQLSGGQKQRI 523 (1253)
Q Consensus 452 ~~i~~v~Q~~--~lf-~~ti~~ni~~g~~----~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgGq~qri 523 (1253)
++++|++|++ .++ ..|++||+.++.. ....+....++ .+.++.+ |+. ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 8999999999 344 4699999986421 11111111111 1233333 332 345666788999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEee
Q 000851 524 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESG 594 (1253)
Q Consensus 524 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g 594 (1253)
+||||++.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998854 799999999999987 58999999999998764
No 409
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=376.53 Aligned_cols=219 Identities=31% Similarity=0.516 Sum_probs=181.9
Q ss_pred EEEEEEEEECCCCC---CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCC----CHHH
Q 000851 377 IEFSEVCFAYPSRP---HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL----QLKW 449 (1253)
Q Consensus 377 i~~~~v~f~y~~~~---~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~ 449 (1253)
|+++||+|+|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 2499999999999999999999999999999999999999999999999998753 3466
Q ss_pred HhcccEEEeccC--ccCcccHHHHHhcCCCC--CCHHHHHHHHHHhCcHHHHhcCCCCcc-ccccCCCCCCChHHHHHHH
Q 000851 450 LREQMGLVSQEP--ALFATSIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 450 ~r~~i~~v~Q~~--~lf~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgGq~qria 524 (1253)
+|+.|+|++|++ .+|+.|++||+.++... .+.++..+.+ .+.++.+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALA-----REKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 67888999999875321 2233222211 1222222 333 2345566789999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|||||+.+|++|||||||++||+.+.+.+.+.|.++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999875 47899999999999865 899999999999999999887653
No 410
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=9.2e-40 Score=413.00 Aligned_cols=104 Identities=31% Similarity=0.534 Sum_probs=94.2
Q ss_pred Cccc-cccCCCCCCChhHHHHHHHHHHhccCC---CEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhh
Q 000851 1133 GYQS-HVGDRGVQLSGGQKQRVAIARAILKNP---SILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIR 1207 (1253)
Q Consensus 1133 gldt-~vge~G~~LSgGQkQrlaLARALlr~p---~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~ 1207 (1253)
|++. .++.....||||||||++|||+|+++| +++||||||++||+.+.+.+.+.|+++. +|+|||+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5554 467778899999999999999999999 9999999999999999999999999875 5899999999999999
Q ss_pred ccCEEEEE------eCCEEEEecChhHHhhcccch
Q 000851 1208 NADKIAVL------QQGKVAEIGSHEQLLRKENGI 1236 (1253)
Q Consensus 1208 ~~D~I~Vl------~~G~ive~Gt~~eLl~~~~g~ 1236 (1253)
.||+|++| ++|+|++.|+++++.+.+++.
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~s~ 932 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEASY 932 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcccH
Confidence 99999999 799999999999999755443
No 411
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-40 Score=370.25 Aligned_cols=212 Identities=28% Similarity=0.480 Sum_probs=182.7
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++++|+++ .+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 3 l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 3 LEARNLSVRLGGR--TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred EEEEeEEEEeCCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 7899999999753 49999999999999999999999999999999999999999999999999988777777889999
Q ss_pred EeccCcc-CcccHHHHHhcCCCCC--C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPAL-FATSIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~l-f~~ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
++|++.+ +..|++||+.++.... . .+++.++++..++.+ .......+||||||||++|||||
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGe~qrv~la~al 149 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAH-----------LAGRDYPQLSGGEQQRVQLARVL 149 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHh-----------HhcCCcccCCHHHHHHHHHHHHH
Confidence 9999987 5679999998864211 1 123444444444433 33444568999999999999999
Q ss_pred c------cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 530 L------RNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 530 ~------~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
+ .+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 150 ~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 150 AQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred hcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHh
Confidence 9 5999999999999999999999999999875 47899999999999874 8999999999999999998876
Q ss_pred h
Q 000851 601 S 601 (1253)
Q Consensus 601 ~ 601 (1253)
.
T Consensus 230 ~ 230 (258)
T PRK13548 230 T 230 (258)
T ss_pred C
Confidence 5
No 412
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=373.61 Aligned_cols=218 Identities=29% Similarity=0.455 Sum_probs=183.4
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCCC--CHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSL--QLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~~ 448 (1253)
.|+++|++++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 5999999999974 3499999999999999999999999999999999999985 899999999998643 234
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCC--CCHH----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKED--ASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
.+|+.++|++|++.+|+.|++||+.++... .+.+ ++.++++..++.++ ..........+||||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgG~~qr 162 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDE-------TSDRLKSPALSLSGGQQQR 162 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcc-------hhhhhcCChhhCCHHHHHH
Confidence 567889999999999999999999875321 1222 23344444433221 1223345667899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999998778999999999999865 89999999999999999998865
Q ss_pred c
Q 000851 602 K 602 (1253)
Q Consensus 602 ~ 602 (1253)
.
T Consensus 243 ~ 243 (258)
T PRK14268 243 N 243 (258)
T ss_pred C
Confidence 4
No 413
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=372.61 Aligned_cols=218 Identities=29% Similarity=0.464 Sum_probs=186.3
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCC--CCCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLK--SLQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~--~~~~~ 448 (1253)
.|+++||+++|++. ++|+|+||+|++||+++|+||||||||||+++|+|++. |++|+|.++|.++. ..+..
T Consensus 10 ~l~i~~v~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGSF--LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECCE--EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 48999999999743 49999999999999999999999999999999999986 48999999999985 34556
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCCC-----CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKEDA-----SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 523 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qri 523 (1253)
.+|++|+||+|++.+|+.|++||+.++.... ..+++.++++.+++.+++. ......+.+||||||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHHHH
Confidence 7788999999999999889999999864321 1233444555555544432 234556778999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEe---------CCEEEEe
Q 000851 524 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLK---------NGQVVES 593 (1253)
Q Consensus 524 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~---------~G~i~~~ 593 (1253)
+|||||+++|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|+ +|++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999998777899999999998865 79999998 8999999
Q ss_pred eCcchhhhc
Q 000851 594 GTHVDLISK 602 (1253)
Q Consensus 594 g~~~~l~~~ 602 (1253)
|+++|+.+.
T Consensus 241 ~~~~~~~~~ 249 (264)
T PRK14243 241 DRTEKIFNS 249 (264)
T ss_pred CCHHHHHhC
Confidence 999998654
No 414
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=383.21 Aligned_cols=228 Identities=22% Similarity=0.365 Sum_probs=187.7
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC----CCccEEEECCccCCCCCHHHH
Q 000851 1006 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD----PISGTVLIDGYDIRTLNLRSL 1080 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~----p~~G~I~idG~di~~i~~~~l 1080 (1253)
|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||.++.+++...+
T Consensus 4 L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (330)
T PRK15093 4 LDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRER 83 (330)
T ss_pred EEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 79999999996432 2469999999999999999999999999999999999986 589999999999998887654
Q ss_pred h----cceEEEccCCC--ccc-ccHHHHhccCC------C----C--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCC
Q 000851 1081 R----RKIGLVQQEPA--LFS-TTIYENIKYGN------E----D--ASEIELMKATKAANAHGFISRMPEGYQSHVGDR 1141 (1253)
Q Consensus 1081 R----~~i~~V~Qdp~--Lf~-gTIreNl~~g~------~----~--~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~ 1141 (1253)
+ ++|+||+|+|. +++ .||.+|+.... . . ...+++.++++.+++.+.-. .....
T Consensus 84 ~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~~~~~ 155 (330)
T PRK15093 84 RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD--------AMRSF 155 (330)
T ss_pred HHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH--------HHhCC
Confidence 3 47999999996 333 58999885310 0 0 01234556666666643210 12233
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCC
Q 000851 1142 GVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQG 1218 (1253)
Q Consensus 1142 G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G 1218 (1253)
..+||||||||++|||||+.+|+|||||||||+||+.+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 468999999999999999999999999999999999999999999998753 7899999999999965 9999999999
Q ss_pred EEEEecChhHHhhcccchHHHHH
Q 000851 1219 KVAEIGSHEQLLRKENGIYKQLI 1241 (1253)
Q Consensus 1219 ~ive~Gt~~eLl~~~~g~y~~L~ 1241 (1253)
+|+|.|+++++++.+...|.+.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~~l 258 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQAL 258 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHHHH
Confidence 99999999999876666776543
No 415
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.6e-40 Score=380.54 Aligned_cols=217 Identities=28% Similarity=0.486 Sum_probs=178.9
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+|++||
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 4899999999974 3499999999999999999999999999999999999999999999999998653 355688999
Q ss_pred EEeccCccCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000851 456 LVSQEPALFA-TSIANNILLGKE--DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRN 532 (1253)
Q Consensus 456 ~v~Q~~~lf~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~ 532 (1253)
||+|++.++. .|++||+.+... ..+..+..+.++ +.++.+ |+.........+||||||||++|||||+.+
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~ 153 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIP-----SLLEFA--RLESKADVRVALLSGGMKRRLTLARALIND 153 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHH-----HHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 9999999885 599999975211 122222222111 112211 222223344468999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 533 PKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 533 p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 154 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 154 PQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999999874 47899999999999865 899999999999999999988653
No 416
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.9e-40 Score=365.92 Aligned_cols=212 Identities=35% Similarity=0.556 Sum_probs=173.7
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCH---HHHh
Q 000851 1006 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL---RSLR 1081 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~---~~lR 1081 (1253)
|+++||+++|+.+. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999997421 1269999999999999999999999999999999999999999999999999988764 5778
Q ss_pred cceEEEccCC--Ccc-cccHHHHhccCC----CCCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChhHHHHH
Q 000851 1082 RKIGLVQQEP--ALF-STTIYENIKYGN----EDASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1082 ~~i~~V~Qdp--~Lf-~gTIreNl~~g~----~~~~d~ei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSgGQkQrl 1153 (1253)
++++|++|+| .++ ..|+++|+.++. +...+++...+. .+.++.+ |++ ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 9999999999 344 479999997531 111111111110 1223332 332 234555678999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhh-ccCEEEEEeCCEEEEec
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~G 1224 (1253)
+|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998754 789999999999997 49999999999998865
No 417
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.2e-40 Score=365.72 Aligned_cols=210 Identities=30% Similarity=0.492 Sum_probs=180.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.|+++||+++|+ +.++++|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 499999999996 34699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccCCCcccccHHHHhccCC---CCC-CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000851 1085 GLVQQEPALFSTTIYENIKYGN---EDA-SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 1160 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~gTIreNl~~g~---~~~-~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALl 1160 (1253)
+|++|++.+|+.|++||+.++. ... .++++.++++..++. ++.......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALP----------DTILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCC----------hHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999998631 111 122333444444332 12334556789999999999999999
Q ss_pred cCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhccCEEEEEe-CCEEEEecChh
Q 000851 1161 KNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQ-QGKVAEIGSHE 1227 (1253)
Q Consensus 1161 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~-~G~ive~Gt~~ 1227 (1253)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||++++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999999998753 789999999999998899999995 66677888885
No 418
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.1e-40 Score=363.78 Aligned_cols=201 Identities=31% Similarity=0.531 Sum_probs=172.0
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH---HHhcc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLREQ 453 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~~ 453 (1253)
++++|++++|+++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+++.. .+++.
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 6899999999522 3499999999999999999999999999999999999999999999999999876543 46788
Q ss_pred cEEEeccCccCc-ccHHHHHhcCCCC--C----CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 454 MGLVSQEPALFA-TSIANNILLGKED--A----SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 454 i~~v~Q~~~lf~-~ti~~ni~~g~~~--~----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
++|++|++.+|. .|++||+.++... . ..+++.++++..++.+++.+. ..+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAF-----------PEQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHHHH
Confidence 999999999986 5999999875211 1 123455566666655544433 358999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQ 589 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~ 589 (1253)
|||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999875 48999999999999876 89999999985
No 419
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=7.1e-41 Score=365.13 Aligned_cols=201 Identities=34% Similarity=0.576 Sum_probs=170.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCC--CCHHHHhcc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRT--LNLRSLRRK 1083 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~--i~~~~lR~~ 1083 (1253)
|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999973 469999999999999999999999999999999999999999999999999853 345678899
Q ss_pred eEEEccCCCccc-ccHHHHhccCCC---CCCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHH
Q 000851 1084 IGLVQQEPALFS-TTIYENIKYGNE---DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAI 1155 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~-gTIreNl~~g~~---~~~d~----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaL 1155 (1253)
++|+||+|.+|+ .|++||+.++.. ..+.+ ++.++++..++. ..+.....+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLA-----------DKADAYPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCH-----------hHhhhCccccCHHHHHHHHH
Confidence 999999999986 699999987521 12222 233344444433 33334446899999999999
Q ss_pred HHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEE
Q 000851 1156 ARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKV 1220 (1253)
Q Consensus 1156 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~i 1220 (1253)
||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875 47899999999999965 999999999975
No 420
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=4.7e-40 Score=368.94 Aligned_cols=227 Identities=28% Similarity=0.441 Sum_probs=186.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCcc-----CCCCCHHH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYD-----IRTLNLRS 1079 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~d-----i~~i~~~~ 1079 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999973 469999999999999999999999999999999999999999999999998 87776554
Q ss_pred ----HhcceEEEccCCC--cc-cccHHHHhccCC---CCCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChh
Q 000851 1080 ----LRRKIGLVQQEPA--LF-STTIYENIKYGN---EDASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGG 1148 (1253)
Q Consensus 1080 ----lR~~i~~V~Qdp~--Lf-~gTIreNl~~g~---~~~~d~ei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSgG 1148 (1253)
+|+.++||||++. ++ ..|+.+|+.+.. ...+..++. ..+.++++.++ ++ +..+..+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~~--l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERVE--IDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHcC--CChhHHhCCCccCCHH
Confidence 3668999999984 33 358888886421 111111221 12345555553 33 3456677899999
Q ss_pred HHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecC
Q 000851 1149 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1225 (1253)
Q Consensus 1149 QkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt 1225 (1253)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998653 7899999999999975 99999999999999999
Q ss_pred hhHHhhcccchHHHHH
Q 000851 1226 HEQLLRKENGIYKQLI 1241 (1253)
Q Consensus 1226 ~~eLl~~~~g~y~~L~ 1241 (1253)
++++..++...|.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~ 251 (258)
T PRK11701 236 TDQVLDDPQHPYTQLL 251 (258)
T ss_pred HHHHhcCCCCHHHHHH
Confidence 9999865444565443
No 421
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.2e-40 Score=350.21 Aligned_cols=172 Identities=44% Similarity=0.741 Sum_probs=162.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+.. ..++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999742 246999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEccCCCcccccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000851 1086 LVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSI 1165 (1253)
Q Consensus 1086 ~V~Qdp~Lf~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~I 1165 (1253)
|++|+|.+|++|++||+ ||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhccCEEEEEeCCEE
Q 000851 1166 LLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRNADKIAVLQQGKV 1220 (1253)
Q Consensus 1166 LlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~i 1220 (1253)
|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999999875 48899999999999988999999999974
No 422
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.4e-40 Score=363.04 Aligned_cols=202 Identities=33% Similarity=0.528 Sum_probs=171.4
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCH---HHHhcc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL---KWLREQ 453 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~~ 453 (1253)
++++|++++|+++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 349999999999999999999999999999999999999999999999999977654 346788
Q ss_pred cEEEeccCccCcc-cHHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 454 MGLVSQEPALFAT-SIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 454 i~~v~Q~~~lf~~-ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
++||+|++.+|.. |++||+.++... .+ .+++.++++..++.+.. .....+||||||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKH-----------RALPAELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhcCHHHHHHHHHH
Confidence 9999999999975 999999875321 11 12344445555444433 334458999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQV 590 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i 590 (1253)
||++.+|+++||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999874 57999999999999976 899999999974
No 423
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=371.09 Aligned_cols=227 Identities=26% Similarity=0.463 Sum_probs=189.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEEC------CccCCCCCHH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLID------GYDIRTLNLR 1078 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~id------G~di~~i~~~ 1078 (1253)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |.++.+.+..
T Consensus 10 ~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 5999999999963 469999999999999999999999999999999999999998666555 5777777777
Q ss_pred HHhcceEEEccCCCcccc-cHHHHhccCCC--CC-CHHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHH
Q 000851 1079 SLRRKIGLVQQEPALFST-TIYENIKYGNE--DA-SEIE----LMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1079 ~lR~~i~~V~Qdp~Lf~g-TIreNl~~g~~--~~-~d~e----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQk 1150 (1253)
.+|++++|+||+|.+|.+ |+++|+.++.. .. .+++ +.++++..++.+++. ......+..||||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVY-------DRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccch-------hhhcCCcccCCHHHH
Confidence 889999999999999975 99999986522 11 2222 344555555433221 123345678999999
Q ss_pred HHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhh-ccCEEEEEeCCEEEEecChhHH
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIR-NADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1151 QrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
||++||||++++|++|||||||++||+.+++.+.+.|++..+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999998877899999999999995 5999999999999999999999
Q ss_pred hhcccchHHHHH
Q 000851 1230 LRKENGIYKQLI 1241 (1253)
Q Consensus 1230 l~~~~g~y~~L~ 1241 (1253)
.+.+...|.+.+
T Consensus 240 ~~~~~~~~~~~~ 251 (257)
T PRK14246 240 FTSPKNELTEKY 251 (257)
T ss_pred HhCCCcHHHHHH
Confidence 875555565554
No 424
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=386.83 Aligned_cols=212 Identities=31% Similarity=0.498 Sum_probs=184.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCC----CHHHHh
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTL----NLRSLR 1081 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i----~~~~lR 1081 (1253)
|++ |++++|.+ . .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++... +....|
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999963 2 23 99999999999999999999999999999999999999999999998653 244568
Q ss_pred cceEEEccCCCccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000851 1082 RKIGLVQQEPALFS-TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 1160 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALl 1160 (1253)
++++||+|++.+|+ .|++||+.++......+++.++++..++.++..+. ..+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRY-----------PGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCC-----------cccCCHHHHHHHHHHHHHH
Confidence 89999999999997 59999999875444455677777777665554443 3679999999999999999
Q ss_pred cCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhccc
Q 000851 1161 KNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKEN 1234 (1253)
Q Consensus 1161 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~ 1234 (1253)
++|++||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 99999999999999999999999999998753 7899999999998865 99999999999999999999988654
No 425
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=370.57 Aligned_cols=218 Identities=31% Similarity=0.514 Sum_probs=185.2
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCC-----CcEEEECCeeCCC--CCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT-----SGKILLDGHDLKS--LQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~~~ 448 (1253)
.|+++|++|+|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.+ .+..
T Consensus 4 ~l~~~~l~~~~~~~--~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHKH--QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECCe--eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 58999999999743 4999999999999999999999999999999999999997 6999999999864 3455
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCC--C-CH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKED--A-SM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.+|+.++||+|++.+|+.|++||+.++... . .. +.+.++++..++.++ ........+.+|||||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDE-------VKDNLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchh-------hhhHhhCCcccCCHHHHH
Confidence 778899999999999989999999886321 1 11 223333333443332 223456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999999876 7999999999999999998876
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 235 ~~ 236 (251)
T PRK14249 235 SR 236 (251)
T ss_pred hC
Confidence 54
No 426
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.4e-40 Score=385.71 Aligned_cols=206 Identities=28% Similarity=0.450 Sum_probs=173.7
Q ss_pred cccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCe----eCCCCCHHHH---h-cccEEEeccCcc
Q 000851 392 MVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGH----DLKSLQLKWL---R-EQMGLVSQEPAL 463 (1253)
Q Consensus 392 ~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~----~~~~~~~~~~---r-~~i~~v~Q~~~l 463 (1253)
.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||. ++...+...+ | ++|+||+|++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 3899999999999999999999999999999999999999999999997 5666655443 3 579999999999
Q ss_pred Cc-ccHHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 000851 464 FA-TSIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 536 (1253)
Q Consensus 464 f~-~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~il 536 (1253)
|+ .|++||+.++... .+ .+++.++++..++.++.. ....+||||||||++|||||+.+|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~-----------~~~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWAD-----------KKPGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 97 5999999987421 11 233455555555544433 344589999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhhhcC-chHHH
Q 000851 537 LLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISKG-GEYAA 608 (1253)
Q Consensus 537 ilDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~-~~y~~ 608 (1253)
|||||||+||+.+.+.+++.|.++.+ ++|+|+|||+++.+. .||+|++|++|++++.|++++++.++ ..|.+
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 262 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVA 262 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHH
Confidence 99999999999999999999998854 799999999999975 58999999999999999999998653 34443
No 427
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=371.86 Aligned_cols=215 Identities=29% Similarity=0.522 Sum_probs=181.9
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCC---------
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL--------- 445 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~--------- 445 (1253)
+.++++||+++|+++ .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (257)
T PRK10619 4 NKLNVIDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKV 81 (257)
T ss_pred ccEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccc
Confidence 469999999999743 499999999999999999999999999999999999999999999999988542
Q ss_pred ----CHHHHhcccEEEeccCccCcc-cHHHHHhcCCC---CCCH----HHHHHHHHHhCcHHHHhcCCCCccccc-cCCC
Q 000851 446 ----QLKWLREQMGLVSQEPALFAT-SIANNILLGKE---DASM----DRVIEAAKAANAHSFVEGLPDGYQTQV-GEGG 512 (1253)
Q Consensus 446 ----~~~~~r~~i~~v~Q~~~lf~~-ti~~ni~~g~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~-g~~g 512 (1253)
....+++.++||+|++.+|.. |++||+.++.. .... +++.++++.. |+.... ...+
T Consensus 82 ~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~ 150 (257)
T PRK10619 82 ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKV-----------GIDERAQGKYP 150 (257)
T ss_pred ccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----------CCChhhhhCCc
Confidence 134667889999999999975 99999986421 1111 2233333333 333332 4556
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000851 513 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQV 590 (1253)
Q Consensus 513 ~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i 590 (1253)
.+||||||||++|||||+++|+++||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 7899999999999999999999999999999999999999999999885 48999999999999986 899999999999
Q ss_pred EEeeCcchhhhc
Q 000851 591 VESGTHVDLISK 602 (1253)
Q Consensus 591 ~~~g~~~~l~~~ 602 (1253)
++.|+++++...
T Consensus 231 ~~~~~~~~~~~~ 242 (257)
T PRK10619 231 EEEGAPEQLFGN 242 (257)
T ss_pred EEeCCHHHhhhC
Confidence 999999988654
No 428
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.7e-40 Score=371.74 Aligned_cols=224 Identities=26% Similarity=0.416 Sum_probs=187.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC---ccEEEECCccCCCC-----C
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI---SGTVLIDGYDIRTL-----N 1076 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~---~G~I~idG~di~~i-----~ 1076 (1253)
-|+++||+++|+ +.++|+|+||+|++||+++|+|+||||||||+++|.|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFN---QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeC---CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 489999999996 346999999999999999999999999999999999999986 49999999998653 2
Q ss_pred HHHHhcceEEEccCCCccc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCC
Q 000851 1077 LRSLRRKIGLVQQEPALFS-TTIYENIKYGNED--------------ASEIELMKATKAANAHGFISRMPEGYQSHVGDR 1141 (1253)
Q Consensus 1077 ~~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~~--------------~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~ 1141 (1253)
...+|++++|+||++.+|+ .|+++|+.++... ...+++.++++..++.+.. ...
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFA-----------HQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHH-----------hCC
Confidence 4567889999999999887 5999999865311 0122345555555554433 334
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhh-ccCEEEEEeCC
Q 000851 1142 GVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIR-NADKIAVLQQG 1218 (1253)
Q Consensus 1142 G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G 1218 (1253)
..+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46799999999999999999999999999999999999999999999875 3789999999999875 59999999999
Q ss_pred EEEEecChhHHhhcccchHHHHHHHhh
Q 000851 1219 KVAEIGSHEQLLRKENGIYKQLIRLQQ 1245 (1253)
Q Consensus 1219 ~ive~Gt~~eLl~~~~g~y~~L~~~~~ 1245 (1253)
++++.|+++++ . .....+++....
T Consensus 230 ~i~~~g~~~~~-~--~~~~~~~~~~~~ 253 (262)
T PRK09984 230 HVFYDGSSQQF-D--NERFDHLYRSIN 253 (262)
T ss_pred EEEEeCCHHHh-c--cHHHHHHHhhhh
Confidence 99999999997 3 245666766544
No 429
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=8.3e-41 Score=364.39 Aligned_cols=198 Identities=33% Similarity=0.558 Sum_probs=167.2
Q ss_pred EEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEE
Q 000851 378 EFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLV 457 (1253)
Q Consensus 378 ~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 457 (1253)
+++||+++|+++ .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. .+|++++||
T Consensus 1 ~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGGH--PVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECCE--EeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 368999999743 4999999999999999999999999999999999999999999999998764 467789999
Q ss_pred eccCcc---CcccHHHHHhcCCCCC----------CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHH
Q 000851 458 SQEPAL---FATSIANNILLGKEDA----------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIA 524 (1253)
Q Consensus 458 ~Q~~~l---f~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qria 524 (1253)
+|++.+ ++.|++||+.++.... ..+++.++++..++.++.. ....+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHH
Confidence 999876 5679999998864311 1234455555555544433 344689999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEee
Q 000851 525 IARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 594 (1253)
Q Consensus 525 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 594 (1253)
|||||+.+|++|||||||++||+.+.+.+.+.|.++. +++|+|++||+++.+.. ||+|++|++| +++.|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999999875 67899999999999866 8999999886 55544
No 430
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.9e-40 Score=348.73 Aligned_cols=172 Identities=44% Similarity=0.748 Sum_probs=161.9
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++++|++....+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 47899999997533459999999999999999999999999999999999999999999999999988888888899999
Q ss_pred EeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 000851 457 VSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL 536 (1253)
Q Consensus 457 v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~il 536 (1253)
++|++.+|+.|++||+ ||||||||++||||++.+|++|
T Consensus 81 ~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~l 118 (173)
T cd03246 81 LPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRIL 118 (173)
T ss_pred ECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999997 9999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000851 537 LLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRDVDTIMVLKNGQV 590 (1253)
Q Consensus 537 ilDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~i 590 (1253)
||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+..||++++|++|++
T Consensus 119 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 119 VLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 9999999999999999999999875 47899999999999988999999999974
No 431
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=372.84 Aligned_cols=217 Identities=29% Similarity=0.503 Sum_probs=182.5
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCCCC--HHH
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKSLQ--LKW 449 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~~--~~~ 449 (1253)
-+++||+|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999974 349999999999999999999999999999999999986 47999999999886543 335
Q ss_pred HhcccEEEeccCccCcccHHHHHhcCCC--CC--C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 450 LREQMGLVSQEPALFATSIANNILLGKE--DA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 450 ~r~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
+|+.++||+|++.+|+.|++||+.++.. +. . .+++.++++..++.+++ .+.++..+.+|||||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHHH
Confidence 6889999999999999999999987621 11 1 12334444544443221 22345667789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999875 8999999999999999998886
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 237 ~~ 238 (251)
T PRK14244 237 KN 238 (251)
T ss_pred cC
Confidence 54
No 432
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=370.12 Aligned_cols=219 Identities=28% Similarity=0.490 Sum_probs=184.6
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC--C---CCcEEEECCeeCCCC--CH
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE--P---TSGKILLDGHDLKSL--QL 447 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~~--~~ 447 (1253)
+.|+++|++|+|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.++... +.
T Consensus 3 ~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 80 (252)
T PRK14256 3 NKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDP 80 (252)
T ss_pred cEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCCh
Confidence 56999999999974 349999999999999999999999999999999999986 4 699999999998643 44
Q ss_pred HHHhcccEEEeccCccCc-ccHHHHHhcCCCC---CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHH
Q 000851 448 KWLREQMGLVSQEPALFA-TSIANNILLGKED---AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQ 519 (1253)
Q Consensus 448 ~~~r~~i~~v~Q~~~lf~-~ti~~ni~~g~~~---~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 519 (1253)
..+|+.|+|++|++.+|. .|++||+.++... .+ .+++.++++..++.+++. ...+..+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 153 (252)
T PRK14256 81 VSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVK-------DRLKSNAMELSGGQ 153 (252)
T ss_pred HHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcCcCCHHH
Confidence 567889999999999997 5999999875311 11 123444555555433222 22345667899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcch
Q 000851 520 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVD 598 (1253)
Q Consensus 520 ~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 598 (1253)
|||++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 154 ~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14256 154 QQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKK 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999778999999999999865 89999999999999999998
Q ss_pred hhhc
Q 000851 599 LISK 602 (1253)
Q Consensus 599 l~~~ 602 (1253)
+...
T Consensus 234 ~~~~ 237 (252)
T PRK14256 234 IFTT 237 (252)
T ss_pred HHhC
Confidence 8654
No 433
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.4e-40 Score=360.77 Aligned_cols=210 Identities=28% Similarity=0.449 Sum_probs=186.1
Q ss_pred EEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCH----HHHhcc
Q 000851 378 EFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL----KWLREQ 453 (1253)
Q Consensus 378 ~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~----~~~r~~ 453 (1253)
.+.|+.|+|+.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 578999999754 359999999999999999999999999999999999999999999999998866542 345678
Q ss_pred cEEEeccCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 454 MGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 454 i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
++|++|++.+|+.|++||+.++.+ ...++..++++..++.+++..+|.|+++.++....+||||||||++||||++.+|
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 999999999998899999998754 2445667778888888889999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHH--HHHHHc-CCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000851 534 KILLLDEATSALDAESELIVQR--ALEKIM-SNRTTIVVAHRLSTVRDVDTIMVLKNGQ 589 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~--~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~ 589 (1253)
++|||||||++||+.+...+.+ .++.++ +++|+|++||+.+.+..||++++|++|+
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 9999999999999999998887 555554 3789999999999998899999999884
No 434
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=372.49 Aligned_cols=214 Identities=26% Similarity=0.440 Sum_probs=185.3
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhccc
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQM 454 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 454 (1253)
..|+++||+++|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|
T Consensus 6 ~~l~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGKY--TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECCE--EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 368999999999743 499999999999999999999999999999999999999999999999999888877888899
Q ss_pred EEEeccCccCc-ccHHHHHhcCC-CC------C---CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 000851 455 GLVSQEPALFA-TSIANNILLGK-ED------A---SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 523 (1253)
Q Consensus 455 ~~v~Q~~~lf~-~ti~~ni~~g~-~~------~---~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qri 523 (1253)
+||+|++.+|. .|++||+.++. +. . ..+++.++++..++.++. ...+.+||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLA-----------DQSVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHh-----------cCCcccCChHHHHHH
Confidence 99999998875 59999998753 11 0 122345555555554433 345568999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 524 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 524 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
+||||++.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998853 7899999999998865 8999999999999999998876
Q ss_pred h
Q 000851 601 S 601 (1253)
Q Consensus 601 ~ 601 (1253)
.
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 5
No 435
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=373.39 Aligned_cols=218 Identities=30% Similarity=0.478 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCC--CCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~ 448 (1253)
-++++|++|+|++. .+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+..
T Consensus 24 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 101 (271)
T PRK14238 24 VFDTQNLNLWYGED--HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVE 101 (271)
T ss_pred EEEEeeeEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHH
Confidence 59999999999743 49999999999999999999999999999999999997 699999999999853 3456
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCC--CCCHH-----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKE--DASMD-----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~~~~-----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.++++++|++|++.+|..|++||+.++.. ...++ .+.++++..++. +++.......+.+|||||||
T Consensus 102 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~l~~~~~~~~~~LSgGe~q 174 (271)
T PRK14238 102 ELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIW-------DELKDRLHDNAYGLSGGQQQ 174 (271)
T ss_pred HHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc-------chHHHHHhcCcccCCHHHHH
Confidence 67889999999999998999999987532 11111 122223222221 12333456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 175 rv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 175 RLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999865 8999999999999999999886
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 255 ~~ 256 (271)
T PRK14238 255 SN 256 (271)
T ss_pred cC
Confidence 54
No 436
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-40 Score=371.14 Aligned_cols=212 Identities=26% Similarity=0.395 Sum_probs=183.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCC--------ccEEEECCccCCCCCH
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPI--------SGTVLIDGYDIRTLNL 1077 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~--------~G~I~idG~di~~i~~ 1077 (1253)
|+++|++++|+ +.++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARR---HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEEC---CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 78999999996 346999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhcceEEEccCCC-cccccHHHHhccCCC-C------CC---HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000851 1078 RSLRRKIGLVQQEPA-LFSTTIYENIKYGNE-D------AS---EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 1146 (1253)
Q Consensus 1078 ~~lR~~i~~V~Qdp~-Lf~gTIreNl~~g~~-~------~~---d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1146 (1253)
..+|+.++|+||++. +|+.|++||+.++.. . .+ ++.+.++++..++ ++.++....+||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGA-----------TALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCc-----------HhhhcCCcccCC
Confidence 888889999999986 578899999987521 1 01 1223444444444 444455567899
Q ss_pred hhHHHHHHHHHHhc---------cCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEE
Q 000851 1147 GGQKQRVAIARAIL---------KNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAV 1214 (1253)
Q Consensus 1147 gGQkQrlaLARALl---------r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~V 1214 (1253)
||||||++|||||+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.+ ||++++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998753 7899999999999964 999999
Q ss_pred EeCCEEEEecChhHHhh
Q 000851 1215 LQQGKVAEIGSHEQLLR 1231 (1253)
Q Consensus 1215 l~~G~ive~Gt~~eLl~ 1231 (1253)
|++|++++.|++++++.
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999999875
No 437
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=369.42 Aligned_cols=218 Identities=26% Similarity=0.444 Sum_probs=185.0
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCCC--CHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSL--QLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~~ 448 (1253)
-|+++|++|+|+++ .+|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++... +..
T Consensus 6 ~i~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGEK--HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECCe--eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 48999999999743 499999999999999999999999999999999999763 489999999998765 456
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCCC---C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
..++.|+|++|++.+|+.|++||+.++.... . ++++.++++..++.+ ++.+..++.+.+|||||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWD-------EVKDRLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCch-------hhHHHhhcChhhCCHHHHH
Confidence 6788899999999999899999999864211 1 122333444433322 2334456777899999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999965 8999999999999999998886
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 237 ~~ 238 (253)
T PRK14261 237 EN 238 (253)
T ss_pred hC
Confidence 54
No 438
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.7e-40 Score=382.89 Aligned_cols=217 Identities=28% Similarity=0.499 Sum_probs=180.1
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.|+++|++++|++. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.+.+ ...++.||
T Consensus 41 ~i~i~nl~k~y~~~--~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGDK--AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 49999999999743 4999999999999999999999999999999999999999999999999987654 46788999
Q ss_pred EEeccCccCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000851 456 LVSQEPALFA-TSIANNILLGKE--DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRN 532 (1253)
Q Consensus 456 ~v~Q~~~lf~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~ 532 (1253)
||||++.++. .|++||+.+... ..+.++..+.++ .+.++ .++++..++. ..+||||||||++|||||+.+
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~ll~~-~~L~~~~~~~----~~~LS~G~kqrv~lA~aL~~~ 190 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIP--SLLEF-ARLESKADAR----VSDLSGGMKRRLTLARALIND 190 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHH--HHHHH-cCCchhhCCC----hhhCCHHHHHHHHHHHHHhcC
Confidence 9999999875 599999985321 112222222111 11111 1334333443 457999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 533 PKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 533 p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|+++..|+.+++...
T Consensus 191 P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 191 PQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999999885 48999999999999965 899999999999999999998653
No 439
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=377.56 Aligned_cols=219 Identities=29% Similarity=0.527 Sum_probs=186.9
Q ss_pred CcEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC-----CCccEEEECCccCCCC--C
Q 000851 1004 GNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD-----PISGTVLIDGYDIRTL--N 1076 (1253)
Q Consensus 1004 g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~-----p~~G~I~idG~di~~i--~ 1076 (1253)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46999999999973 469999999999999999999999999999999999986 6899999999998653 4
Q ss_pred HHHHhcceEEEccCCCcccccHHHHhccCCCC-------------------CCHHHHHHHHHHhcHHHHHHhCCCCcccc
Q 000851 1077 LRSLRRKIGLVQQEPALFSTTIYENIKYGNED-------------------ASEIELMKATKAANAHGFISRMPEGYQSH 1137 (1253)
Q Consensus 1077 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~-------------------~~d~ei~~al~~a~l~~~I~~lp~gldt~ 1137 (1253)
...+|++++||||++.+|++|++||+.++... ..++++.++++.+++. .++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALW-------DEVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCc-------hhhhHH
Confidence 56788999999999999999999999875211 0122344455554442 233445
Q ss_pred ccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcCCceEEEEccCchhhhc-cCEE-EEE
Q 000851 1138 VGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN-ADKI-AVL 1215 (1253)
Q Consensus 1138 vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I-~Vl 1215 (1253)
+...+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++ ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 56667899999999999999999999999999999999999999999999998777899999999999865 9997 578
Q ss_pred eCCEEEEecChhHHhhc
Q 000851 1216 QQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1216 ~~G~ive~Gt~~eLl~~ 1232 (1253)
++|++++.|+++++.+.
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999999764
No 440
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=368.67 Aligned_cols=217 Identities=29% Similarity=0.485 Sum_probs=184.7
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCC-CCCHHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLK-SLQLKW 449 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~-~~~~~~ 449 (1253)
.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4789999999974 3499999999999999999999999999999999999986 5999999999985 445667
Q ss_pred HhcccEEEeccCccCcccHHHHHhcCCCC--CC-----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 450 LREQMGLVSQEPALFATSIANNILLGKED--AS-----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 450 ~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
+|+.++|++|++.+|..|++||+.++... .. .+++.++++..++.+.+ .+.....+.+||||||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEV-------KDRLKSHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhh-------hHHhhcCcccCCHHHHHH
Confidence 88899999999999999999999876321 11 12333444444443322 234455677899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++..
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999998778999999999999876 89999999999999999887754
No 441
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=379.06 Aligned_cols=223 Identities=27% Similarity=0.453 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCC--------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCH
Q 000851 376 QIEFSEVCFAYPSR--------PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQL 447 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~--------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~ 447 (1253)
-|+++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 48999999999631 1349999999999999999999999999999999999999999999999999988764
Q ss_pred H---HHhcccEEEeccCc--cCcc-cHHHHHhcCC---CCCC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCC
Q 000851 448 K---WLREQMGLVSQEPA--LFAT-SIANNILLGK---EDAS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQ 514 (1253)
Q Consensus 448 ~---~~r~~i~~v~Q~~~--lf~~-ti~~ni~~g~---~~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 514 (1253)
. .+|++|+||+|+|. |++. |+.+|+..+. .... .+++.++++..++.+ + .....+.+
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~----~~~~~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------E----HYDRYPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------H----HhcCCCcc
Confidence 3 46778999999983 5553 9999886421 1111 233444555554421 1 12344568
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 000851 515 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVV 591 (1253)
Q Consensus 515 LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~ 591 (1253)
||||||||++|||||+.+|++||+||||++||..++..+.+.|.++.+ |.|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998853 7899999999999975 8999999999999
Q ss_pred EeeCcchhhhcC-chHHH
Q 000851 592 ESGTHVDLISKG-GEYAA 608 (1253)
Q Consensus 592 ~~g~~~~l~~~~-~~y~~ 608 (1253)
|.|+.++++++. ..|.+
T Consensus 235 e~g~~~~~~~~p~hpyt~ 252 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQ 252 (327)
T ss_pred EECCHHHHhcCCCCHHHH
Confidence 999999998763 34544
No 442
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.6e-40 Score=363.28 Aligned_cols=207 Identities=28% Similarity=0.374 Sum_probs=175.6
Q ss_pred cEEEEEEEEECCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH---H
Q 000851 376 QIEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW---L 450 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~ 450 (1253)
.|+++|++++|++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 489999999997532 24999999999999999999999999999999999999999999999999998776543 2
Q ss_pred -hcccEEEeccCccCcc-cHHHHHhcCCC--CCC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 451 -REQMGLVSQEPALFAT-SIANNILLGKE--DAS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 451 -r~~i~~v~Q~~~lf~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
++.++|++|++.+|.. |++||+.++.. ... .+++.++++..++.+++.. ...+||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDH-----------LPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------ChhhCCHHHHHH
Confidence 3579999999999875 99999986421 111 2345555555555544443 345899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-S-NRTTIVVAHRLSTVRDVDTIMVLKNGQVVES 593 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~ 593 (1253)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++. + ++|+|++||+++.+..||++++|++|+++++
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999999874 3 7899999999999888999999999999764
No 443
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-40 Score=365.21 Aligned_cols=210 Identities=36% Similarity=0.606 Sum_probs=182.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|+. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++...+. .|++++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 478999999962 27999999999999999999999999999999999999999999999999887654 378999
Q ss_pred EEccCCCccc-ccHHHHhccCCCC--C----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFS-TTIYENIKYGNED--A----SEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~-gTIreNl~~g~~~--~----~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|++|++.+|+ .|++||+.++... . .++++.++++..++.+++.+. ..+||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRK-----------PETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcC-----------cccCCHHHHHHHHHHHH
Confidence 9999999985 7999999864321 1 123455666666665554433 35799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
++++|++|+|||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 220 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKK 220 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999998653 8999999999999875 999999999999999999999874
No 444
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-41 Score=337.23 Aligned_cols=213 Identities=28% Similarity=0.477 Sum_probs=181.8
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
+++.+++++|++ ...+++||||+++.||+++|.|||||||||++++|..++.|++|.|++||.|... ++...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcce
Confidence 678999999985 3348999999999999999999999999999999999999999999999999865 45667889999
Q ss_pred EeccCccCcc-cHHHHHhcCCCCC--C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALFAT-SIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
++-+.-|+.. |++|||.|...-. . ..++.+..+..+ ++.....+..++|-|+||||+|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~-----------l~~~~~rRv~~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQ-----------LLEYLDRRVGEFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhC-----------hHHHHHHHHhhhchhhHHHHHHHHHH
Confidence 9988888866 9999998742211 1 122333333333 33334445567999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
++||++++||||||+||..+.+.+++.+.+++. |+++|+.||.+++++. ||+++++++|+++..|+.+++.++
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 999999999999999999999999999999876 8999999999999985 999999999999999999988765
No 445
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=369.05 Aligned_cols=218 Identities=28% Similarity=0.457 Sum_probs=184.9
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCCC--CHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSL--QLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~~ 448 (1253)
.|+++|++++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999974 3499999999999999999999999999999999999875 799999999998643 345
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCCC---C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKEDA---S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.+|+.++|++|++.+|+.|++||+.++.... + .+++.++++..++.+.+ .......+..|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEV-------KDDLKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHHHH
Confidence 6788899999999999999999998763211 1 12334455555443222 22344567789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999876 8999999999999999999886
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 235 ~~ 236 (251)
T PRK14270 235 LE 236 (251)
T ss_pred cC
Confidence 54
No 446
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.5e-40 Score=378.19 Aligned_cols=216 Identities=23% Similarity=0.445 Sum_probs=183.6
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +...+|+.+||
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999974 349999999999999999999999999999999999999999999999999876 34567889999
Q ss_pred EeccCccCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 457 VSQEPALFAT-SIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
+||++.+|.. |+.||+.+.... ...++..+. +++.++.+ |++........+||||||||++|||||+.+|
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~p 152 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQR-----VEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHDP 152 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcCC
Confidence 9999999976 999999763211 111111111 12233333 4554555667789999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 534 KILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
++|||||||++||+.+.+.+++.++++.+++|+|++||+++.+.. ||+|++|++|+++..|+.+++.+.
T Consensus 153 ~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 153 KVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 999999999999999999999999999878999999999999876 899999999999999999998654
No 447
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.8e-40 Score=381.95 Aligned_cols=225 Identities=27% Similarity=0.449 Sum_probs=184.4
Q ss_pred cEEEEEEEEECCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCC---CcEEEECCeeCCCCCHHHH
Q 000851 376 QIEFSEVCFAYPSR--PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT---SGKILLDGHDLKSLQLKWL 450 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~~~~~~~~~~ 450 (1253)
-++++|++++|+.. ...+|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.+||.++..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 58999999999642 234999999999999999999999999999999999999996 9999999999988876655
Q ss_pred h----cccEEEeccC--ccCc-ccHHHHHhcCC---CCCCHHH----HHHHHHHhCcHHHHhcCCCCccccccCCCCCCC
Q 000851 451 R----EQMGLVSQEP--ALFA-TSIANNILLGK---EDASMDR----VIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLS 516 (1253)
Q Consensus 451 r----~~i~~v~Q~~--~lf~-~ti~~ni~~g~---~~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 516 (1253)
+ +.|+||+|+| .+++ .|+.+|+.... ...+.++ +.+.++.. ++|++. ..++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~v-------gL~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAV-------KMPEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-------CCCChH-HHhcCCcccCC
Confidence 3 4799999998 4554 38888775321 1122222 22222222 344433 23567788999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEe
Q 000851 517 GGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVES 593 (1253)
Q Consensus 517 gGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~ 593 (1253)
||||||++|||||+.+|++||+|||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998854 7899999999999875 899999999999999
Q ss_pred eCcchhhhcC-chHHH
Q 000851 594 GTHVDLISKG-GEYAA 608 (1253)
Q Consensus 594 g~~~~l~~~~-~~y~~ 608 (1253)
|+++++.+.. ..|.+
T Consensus 244 g~~~~i~~~p~~pyt~ 259 (330)
T PRK09473 244 GNARDVFYQPSHPYSI 259 (330)
T ss_pred CCHHHHHhCCCCHHHH
Confidence 9999998763 34554
No 448
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-40 Score=358.58 Aligned_cols=201 Identities=28% Similarity=0.519 Sum_probs=173.1
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++++|++. . .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 i~~~~l~~~~~~~---~-~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ---P-MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE---e-cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999742 2 39999999999999999999999999999999999999999999999876554 3578999
Q ss_pred EeccCccCcc-cHHHHHhcCCC-C-----CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALFAT-SIANNILLGKE-D-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~-~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
++|++.+|.. |++||+.++.. . ...+++.++++..++.+.....| .+||||||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999976 99999987642 1 12335666666666665554443 48999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEee
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 594 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 594 (1253)
+.+|++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999875 37899999999999866 8999999999998764
No 449
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=368.71 Aligned_cols=218 Identities=31% Similarity=0.521 Sum_probs=184.3
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCCC--CHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSL--QLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~~ 448 (1253)
-|+++|++|+|+++ ++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGEK--KAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCCc--eeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 38999999999743 499999999999999999999999999999999999984 899999999998653 344
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCC---CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKED---AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~---~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.+++.++|++|++.+|..|++||+.++... .. ++++.++++..++.+.+ +......+.+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-------KSELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-------HHHHhCChhhcCHHHHH
Confidence 667889999999999999999999875311 11 12234445555443322 22345667899999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999998778999999999998755 8999999999999999999887
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 234 ~~ 235 (250)
T PRK14262 234 ER 235 (250)
T ss_pred hC
Confidence 54
No 450
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-40 Score=370.22 Aligned_cols=218 Identities=27% Similarity=0.479 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCCCC-HHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSLQ-LKW 449 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~-~~~ 449 (1253)
.++++||+|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 5899999999974 3499999999999999999999999999999999999986 7999999999987653 456
Q ss_pred HhcccEEEeccCccCcccHHHHHhcCCCC---CCHHHHHH----HHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 450 LREQMGLVSQEPALFATSIANNILLGKED---ASMDRVIE----AAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 450 ~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~---~~~~~~~~----~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
+++.|+|++|++.+|+.|++||+.++... .+.++..+ .++..+ +++.+.+.+...+.+||||||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVG-------LWDAVKDRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcC-------CCchhhhHhhCCcccCCHHHHHH
Confidence 78899999999999999999999876321 23333322 222222 22222344566778999999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhh
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999998777899999999999865 89999999999999999999876
Q ss_pred c
Q 000851 602 K 602 (1253)
Q Consensus 602 ~ 602 (1253)
.
T Consensus 252 ~ 252 (276)
T PRK14271 252 S 252 (276)
T ss_pred C
Confidence 5
No 451
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-40 Score=378.70 Aligned_cols=224 Identities=26% Similarity=0.410 Sum_probs=181.5
Q ss_pred EEEEEEEEECCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC----CCCcEEEECCeeCCCCCHHHH
Q 000851 377 IEFSEVCFAYPSRP--HMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE----PTSGKILLDGHDLKSLQLKWL 450 (1253)
Q Consensus 377 i~~~~v~f~y~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~~~g~~~~~~~~~~~ 450 (1253)
++++|++++|+... ..+|+||||+|++||++||||+||||||||+++|+|+++ |++|+|.++|+|+.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 79999999997532 249999999999999999999999999999999999998 489999999999988877655
Q ss_pred h----cccEEEeccCc--cCcc-cHHHHHhc----CCCCC---CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCC
Q 000851 451 R----EQMGLVSQEPA--LFAT-SIANNILL----GKEDA---SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLS 516 (1253)
Q Consensus 451 r----~~i~~v~Q~~~--lf~~-ti~~ni~~----g~~~~---~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 516 (1253)
+ +.|+||+|+|. +++. |+.+|+.. ..... ..+++.++++..++.+. ....+..+.+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~--------~~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDP--------ASRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------HHHHhCCchhCC
Confidence 4 36999999985 4432 66655532 11111 12334455555544321 123456677999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEe
Q 000851 517 GGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVES 593 (1253)
Q Consensus 517 gGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~ 593 (1253)
||||||++|||||+.+|++||+|||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+. .||+|+||++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999999853 789999999999985 4899999999999999
Q ss_pred eCcchhhhcC-chHHH
Q 000851 594 GTHVDLISKG-GEYAA 608 (1253)
Q Consensus 594 g~~~~l~~~~-~~y~~ 608 (1253)
|+.+++.++. ..|.+
T Consensus 236 g~~~~~~~~p~hpyt~ 251 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQ 251 (326)
T ss_pred CCHHHHhhCCCChHHH
Confidence 9999998763 34543
No 452
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.5e-40 Score=369.55 Aligned_cols=212 Identities=26% Similarity=0.470 Sum_probs=182.1
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
++++|+++.|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 2 l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGGR--LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECCE--EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 6899999999753 49999999999999999999999999999999999999999999999999988888888888999
Q ss_pred EeccCcc-CcccHHHHHhcCCCCC----------CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHH
Q 000851 457 VSQEPAL-FATSIANNILLGKEDA----------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAI 525 (1253)
Q Consensus 457 v~Q~~~l-f~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriai 525 (1253)
++|++.+ +..|++||+.++.... ..+++.++++..++. ......+..||||||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELS-----------HLADRDMSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcH-----------hhhcCCcccCCHHHHHHHHH
Confidence 9999864 4579999998863210 112334444444433 33344567899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC-CCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhhh
Q 000851 526 ARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS-NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLIS 601 (1253)
Q Consensus 526 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 601 (1253)
|||++.+|+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999998854 789999999999995 589999999999999999988754
No 453
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.6e-40 Score=380.36 Aligned_cols=200 Identities=28% Similarity=0.477 Sum_probs=172.2
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceEEEccCCCcccc-cHH
Q 000851 1021 ITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFST-TIY 1099 (1253)
Q Consensus 1021 ~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~Lf~g-TIr 1099 (1253)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|+||++.+|+. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999876 445678999999999999875 999
Q ss_pred HHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccC
Q 000851 1100 ENIKYGNE--DAS----EIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATS 1173 (1253)
Q Consensus 1100 eNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS 1173 (1253)
||+.+... ..+ ++++.++++..++.+. ......+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEA-----------ADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhH-----------hCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99986421 112 2234445555554332 223346799999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1174 ALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1174 ~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
+||+.+.+.+++.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999875 47899999999999976 999999999999999999999764
No 454
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.3e-40 Score=368.85 Aligned_cols=213 Identities=24% Similarity=0.367 Sum_probs=175.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhcc--CCCCccEEEECCccCCCCCHHHH-hc
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRF--YDPISGTVLIDGYDIRTLNLRSL-RR 1082 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~--~~p~~G~I~idG~di~~i~~~~l-R~ 1082 (1253)
|+++||+++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+ ++|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVE---DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEEC---CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 47899999996 34699999999999999999999999999999999999 47999999999999988877654 45
Q ss_pred ceEEEccCCCcccc-cHHHHhccCCCC---------CCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCC-CCCh
Q 000851 1083 KIGLVQQEPALFST-TIYENIKYGNED---------ASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGV-QLSG 1147 (1253)
Q Consensus 1083 ~i~~V~Qdp~Lf~g-TIreNl~~g~~~---------~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~-~LSg 1147 (1253)
.++||||+|.+|++ |++||+.+.... .+. +.+.++++..++.+ . ....... .|||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~---~~~~~~~~~LS~ 147 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDE-------E---FLNRSVNEGFSG 147 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCch-------h---hcccccccCcCH
Confidence 69999999999875 899998653110 111 12333333333321 1 1122222 4999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc--cCEEEEEeCCEEEEec
Q 000851 1148 GQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN--ADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1148 GQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~--~D~I~Vl~~G~ive~G 1224 (1253)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999875 47899999999999976 7999999999999999
Q ss_pred ChhHHhh
Q 000851 1225 SHEQLLR 1231 (1253)
Q Consensus 1225 t~~eLl~ 1231 (1253)
+++++..
T Consensus 228 ~~~~~~~ 234 (243)
T TIGR01978 228 DVELAKE 234 (243)
T ss_pred CHHHhcc
Confidence 9986543
No 455
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4.7e-40 Score=360.72 Aligned_cols=204 Identities=30% Similarity=0.484 Sum_probs=171.9
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH---HHhcc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK---WLREQ 453 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~~ 453 (1253)
|+++|++++|++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|+.
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 6899999999422 3499999999999999999999999999999999999999999999999999876543 36789
Q ss_pred cEEEeccCccC-cccHHHHHhcCCC--CCCHH----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 454 MGLVSQEPALF-ATSIANNILLGKE--DASMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 454 i~~v~Q~~~lf-~~ti~~ni~~g~~--~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
++|++|++.++ +.|++||+.++.. ..+.+ ++.++++..++.+++ .....+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKA-----------KNFPIQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCCchhCCHHHHHHHHHH
Confidence 99999999875 5699999987531 12222 233444444443333 344568999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVE 592 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~ 592 (1253)
||++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|+++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999999875 47899999999999976 79999999999864
No 456
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.2e-40 Score=358.54 Aligned_cols=202 Identities=35% Similarity=0.585 Sum_probs=176.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
++++||+++|+. +++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+ .+|+.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999961 468999999999999999999999999999999999999999999999987643 4678899
Q ss_pred EEccCCCcccc-cHHHHhccCC-CC-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFST-TIYENIKYGN-ED-----ASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~-~~-----~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
||||+|.+|.+ |++||+.++. +. ..++++.++++..++.+...+.| .+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999874 9999997642 11 12345667788888776665544 4799999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecC
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1225 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt 1225 (1253)
++++|+++||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998753 7899999999999865 99999999999999875
No 457
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-40 Score=372.85 Aligned_cols=214 Identities=32% Similarity=0.567 Sum_probs=180.8
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCC--CCHHHHhccc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS--LQLKWLREQM 454 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--~~~~~~r~~i 454 (1253)
|+++||+++|++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++.|
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 6899999999632 349999999999999999999999999999999999999999999999999852 2345678899
Q ss_pred EEEeccC--ccCcccHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHH
Q 000851 455 GLVSQEP--ALFATSIANNILLGKED--ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIA 526 (1253)
Q Consensus 455 ~~v~Q~~--~lf~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiA 526 (1253)
+|++|++ .+|+.|+.||+.++... .+. +++.++++..++.++ ....+.+||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGF-----------ENKPPHHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchh-----------hcCChhhCCHHHHHHHHHH
Confidence 9999997 57888999999876321 122 233444444444322 2334568999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 527 RAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 527 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
||++.+|++|||||||++||+.+...+.+.|.++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999885 47999999999999874 899999999999999999988653
No 458
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=370.15 Aligned_cols=219 Identities=32% Similarity=0.484 Sum_probs=186.1
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCC--CCH
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQL 447 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 447 (1253)
+.++++||+++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.+ .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 36899999999974 3499999999999999999999999999999999999985 48999999999854 445
Q ss_pred HHHhcccEEEeccCccCcccHHHHHhcCCCC------CC-HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHH
Q 000851 448 KWLREQMGLVSQEPALFATSIANNILLGKED------AS-MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 520 (1253)
Q Consensus 448 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~------~~-~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~ 520 (1253)
..++++|+||+|++.+|+.|++||+.++... .. .+.+.++++..++.+++.. .....+..||||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHHH
Confidence 6778899999999999999999999875311 11 1234555666665443322 23456678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEe-----CCEEEEee
Q 000851 521 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLK-----NGQVVESG 594 (1253)
Q Consensus 521 qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~-----~G~i~~~g 594 (1253)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999998778999999999999876 89999998 59999999
Q ss_pred Ccchhhhc
Q 000851 595 THVDLISK 602 (1253)
Q Consensus 595 ~~~~l~~~ 602 (1253)
+++++.+.
T Consensus 237 ~~~~~~~~ 244 (259)
T PRK14260 237 VTTQIFSN 244 (259)
T ss_pred CHHHHhcC
Confidence 99998653
No 459
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-40 Score=369.18 Aligned_cols=222 Identities=24% Similarity=0.455 Sum_probs=184.8
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHH-hccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWL-REQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 454 (1253)
-++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 4899999999974 349999999999999999999999999999999999999999999999999987765544 4569
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCCCCH----------HHH--HHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 455 GLVSQEPALFAT-SIANNILLGKEDASM----------DRV--IEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~~~~----------~~~--~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
+|++|++.+|.. |++||+.++...... ... ........+.++++.+ |++......+.+|||||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~q 160 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQR 160 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHHH
Confidence 999999999986 999999986321000 000 0000111223444454 5666667778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcch
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVD 598 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 598 (1253)
|++||||++.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 161 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 240 (255)
T PRK11300 161 RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE 240 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHH
Confidence 99999999999999999999999999999999999998753 7899999999999866 89999999999999999888
Q ss_pred hhh
Q 000851 599 LIS 601 (1253)
Q Consensus 599 l~~ 601 (1253)
+..
T Consensus 241 ~~~ 243 (255)
T PRK11300 241 IRN 243 (255)
T ss_pred Hhh
Confidence 754
No 460
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-40 Score=340.71 Aligned_cols=221 Identities=27% Similarity=0.454 Sum_probs=189.3
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHH-Hhccc
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKW-LREQM 454 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 454 (1253)
-++++|++-.|+.. .+|++|||++++||+++|+|+||+||||+++.|+|+.+|.+|+|.++|+|+...+++. .|..|
T Consensus 3 mL~v~~l~~~YG~~--~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGKI--QALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccce--eEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 37899999999753 4999999999999999999999999999999999999999999999999999987665 57789
Q ss_pred EEEeccCccCcc-cHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 455 GLVSQEPALFAT-SIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 455 ~~v~Q~~~lf~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
+||||.-.+|.. ||+||+.+|......++. .....++..+-+| -+......++.+|||||||.+||||||+.+|
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~----~~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~P 155 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEA----QERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSRP 155 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhccccccc----ccccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcCC
Confidence 999999999977 999999987432221110 1111223334455 3556677888999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 534 KILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
++|+|||||.+|-|.-.+.|.+.|+++++ +.|+++|-++..... -|||.+||++|+|+.+|+.+||.++.
T Consensus 156 klLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 156 KLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred CEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 99999999999999999999999999974 569999999999875 48999999999999999999998764
No 461
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.6e-40 Score=360.70 Aligned_cols=205 Identities=35% Similarity=0.558 Sum_probs=170.8
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCC--CCHHHHhccc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKS--LQLKWLREQM 454 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--~~~~~~r~~i 454 (1253)
|+++||+++|+++ ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...+++.|
T Consensus 1 l~~~~l~~~~~~~--~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGDF--HVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECCe--EeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 4789999999753 49999999999999999999999999999999999999999999999999853 3455678899
Q ss_pred EEEeccCccCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000851 455 GLVSQEPALFA-TSIANNILLGKE---DASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVL 530 (1253)
Q Consensus 455 ~~v~Q~~~lf~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~ 530 (1253)
+|++|++.+|. .|++||+.++.. ....++..+. +.+.++.+ |++........+||||||||++||||++
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~ 151 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEER-----ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARALA 151 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHH-----HHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHHh
Confidence 99999999986 599999987532 1222221111 12233333 4444445556789999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000851 531 RNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQV 590 (1253)
Q Consensus 531 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i 590 (1253)
.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++
T Consensus 152 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 152 MNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999885 47899999999999965 899999999974
No 462
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=5.5e-40 Score=367.29 Aligned_cols=228 Identities=27% Similarity=0.437 Sum_probs=186.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCC----CccEEEECCccCCCCCHHHH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDP----ISGTVLIDGYDIRTLNLRSL 1080 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p----~~G~I~idG~di~~i~~~~l 1080 (1253)
.|+++||+++| . .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 48999999999 2 3599999999999999999999999999999999999999 999999999998632 223
Q ss_pred hcceEEEccCCC-ccc--ccHHHHhccC----CCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1081 RRKIGLVQQEPA-LFS--TTIYENIKYG----NEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1081 R~~i~~V~Qdp~-Lf~--gTIreNl~~g----~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
++.++||||++. .|. .|+.+|+... .....++++.++++..++.++ ++.++....+||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 568999999985 343 5888886431 112234556666766665432 1234555678999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHh
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl 1230 (1253)
+|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998743 7899999999999865 9999999999999999999998
Q ss_pred hcccc-hHHHHHHHhhc
Q 000851 1231 RKENG-IYKQLIRLQQD 1246 (1253)
Q Consensus 1231 ~~~~g-~y~~L~~~~~~ 1246 (1253)
+.... .++.++..+..
T Consensus 230 ~~~~~~~~~~~~~~~~~ 246 (254)
T PRK10418 230 NAPKHAVTRSLVSAHLA 246 (254)
T ss_pred hCCCCHHHHHHHHhhhh
Confidence 75444 45556665543
No 463
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-40 Score=361.40 Aligned_cols=210 Identities=30% Similarity=0.528 Sum_probs=181.5
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++||+++|++. ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEEE
Confidence 6899999999732 2499999999999999999999999999999999999999999999998765442 567999
Q ss_pred EeccCccCcc-cHHHHHhcCC-CC-----CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALFAT-SIANNILLGK-ED-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~-~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
++|++.+|.+ |+.||+.++. +. ..++++.++++..++.+.+.+.| ..||||||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999975 9999998753 11 11345666777777666655554 48999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
+++|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~~ 221 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSGK 221 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCh
Confidence 999999999999999999999999999998743 7899999999999866 8999999999999999998887643
No 464
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=383.58 Aligned_cols=211 Identities=27% Similarity=0.429 Sum_probs=182.0
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCC----CHHHHhc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSL----QLKWLRE 452 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~~r~ 452 (1253)
|++ |++++|++. .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+. +....++
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 899999642 33 89999999999999999999999999999999999999999999998653 2345678
Q ss_pred ccEEEeccCccCcc-cHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000851 453 QMGLVSQEPALFAT-SIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLR 531 (1253)
Q Consensus 453 ~i~~v~Q~~~lf~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~ 531 (1253)
+|+||+|++.+|+. |++||+.++......+++.+.++..++.++.. ....+||||||||++|||||+.
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLD-----------RYPGSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHHHHHHHHc
Confidence 89999999999964 99999999865444455666666665544443 3446899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhcC
Q 000851 532 NPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISKG 603 (1253)
Q Consensus 532 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 603 (1253)
+|++||||||||+||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..+.
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 9999999999999999999999999998753 7899999999998865 8999999999999999999998764
No 465
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=8.3e-40 Score=367.80 Aligned_cols=222 Identities=27% Similarity=0.430 Sum_probs=183.0
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCC---CcEEEECCeeCCCC-----CH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT---SGKILLDGHDLKSL-----QL 447 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~~~~~-----~~ 447 (1253)
-|+++||+++|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 4 ~l~~~nl~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQH--QALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCCe--EEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 48999999999743 4999999999999999999999999999999999999986 49999999998643 23
Q ss_pred HHHhcccEEEeccCccCcc-cHHHHHhcCCCCC--------------CHHHHHHHHHHhCcHHHHhcCCCCccccccCCC
Q 000851 448 KWLREQMGLVSQEPALFAT-SIANNILLGKEDA--------------SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGG 512 (1253)
Q Consensus 448 ~~~r~~i~~v~Q~~~lf~~-ti~~ni~~g~~~~--------------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g 512 (1253)
..+++.++|++|++.+|.. |++||+.++.... ..+++.++++..++.+ ......
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVH-----------FAHQRV 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHH-----------HHhCCc
Confidence 5667889999999998875 9999998764211 0123334444444333 334455
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhh-hcCEEEEEeCCE
Q 000851 513 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVR-DVDTIMVLKNGQ 589 (1253)
Q Consensus 513 ~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~vl~~G~ 589 (1253)
.+||||||||++||||++.+|++|||||||++||+++.+.+.+.|+++. +|+|+|++||+++.+. .||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6899999999999999999999999999999999999999999999985 3799999999999875 489999999999
Q ss_pred EEEeeCcchhhhcCchHHHHHHh
Q 000851 590 VVESGTHVDLISKGGEYAALVNL 612 (1253)
Q Consensus 590 i~~~g~~~~l~~~~~~y~~~~~~ 612 (1253)
+++.|+++++ . .....+++..
T Consensus 231 i~~~g~~~~~-~-~~~~~~~~~~ 251 (262)
T PRK09984 231 VFYDGSSQQF-D-NERFDHLYRS 251 (262)
T ss_pred EEEeCCHHHh-c-cHHHHHHHhh
Confidence 9999999886 2 2344455443
No 466
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=8e-40 Score=368.29 Aligned_cols=225 Identities=26% Similarity=0.443 Sum_probs=185.5
Q ss_pred cEEEEEEEEECCCC-------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHH
Q 000851 376 QIEFSEVCFAYPSR-------PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~-------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~ 448 (1253)
-|+++||+++|+.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 13499999999999999999999999999999999999999999999999998765556
Q ss_pred HHhcccEEEeccCc--cCcc-cHHHHHhcCCC---CCC----HHHHHHHHHHhCcH-HHHhcCCCCccccccCCCCCCCh
Q 000851 449 WLREQMGLVSQEPA--LFAT-SIANNILLGKE---DAS----MDRVIEAAKAANAH-SFVEGLPDGYQTQVGEGGTQLSG 517 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~--lf~~-ti~~ni~~g~~---~~~----~~~~~~~~~~~~~~-~~i~~l~~g~~t~~g~~g~~LSg 517 (1253)
..++.|+||+|++. +++. |+.+|+.++.. ... .+++.++++..++. +.. .....+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA-----------SYYPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH-----------hcCchhcCH
Confidence 66778999999985 4443 89999875321 111 23445555555552 222 223458999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEee
Q 000851 518 GQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 594 (1253)
Q Consensus 518 Gq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 594 (1253)
|||||++||||++.+|++|||||||++||+.+.+.+.+.|.++. .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999985 37899999999999986 8999999999999999
Q ss_pred CcchhhhcC--chHHHHHH
Q 000851 595 THVDLISKG--GEYAALVN 611 (1253)
Q Consensus 595 ~~~~l~~~~--~~y~~~~~ 611 (1253)
+++++.... ..++.++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 233 STADVLASPLHELTKRLIA 251 (267)
T ss_pred CHHHHhcCCCCHHHHHHHH
Confidence 999987653 34555654
No 467
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.7e-40 Score=363.54 Aligned_cols=214 Identities=26% Similarity=0.419 Sum_probs=171.0
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC---CCccEEEECCccCCCCCHHHHh
Q 000851 1006 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD---PISGTVLIDGYDIRTLNLRSLR 1081 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~---p~~G~I~idG~di~~i~~~~lR 1081 (1253)
++|+||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 67999999998532 3579999999999999999999999999999999999999 99999999999875 35678
Q ss_pred cceEEEccCCCcccc-cHHHHhccCCCCCCHHHHHHHHHHhcHHH-HHHhCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000851 1082 RKIGLVQQEPALFST-TIYENIKYGNEDASEIELMKATKAANAHG-FISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 1159 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~g-TIreNl~~g~~~~~d~ei~~al~~a~l~~-~I~~lp~gldt~vge~G~~LSgGQkQrlaLARAL 1159 (1253)
++++|+||++.+|++ |++||+.++..........++.+....++ .+..+ +++.........||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 999999999999987 99999986421110000000111111111 22221 233333345578999999999999999
Q ss_pred ccCCCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCc-hhh-hccCEEEEEeCCEEEEec
Q 000851 1160 LKNPSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRL-STI-RNADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1160 lr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl-~ti-~~~D~I~Vl~~G~ive~G 1224 (1253)
+++|++|||||||++||+.+.+.+.+.|++.. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999875 478999999998 465 559999999999999876
No 468
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-40 Score=364.07 Aligned_cols=211 Identities=33% Similarity=0.541 Sum_probs=181.5
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++|+|++. .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.+.+.. ++.++|
T Consensus 1 l~~~~l~~~~~~~--~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~--~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGGF--VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPH--KRPVNT 76 (232)
T ss_pred CEEEeEEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChh--hcceEE
Confidence 4789999999753 499999999999999999999999999999999999999999999999999766543 578999
Q ss_pred EeccCccCcc-cHHHHHhcCCCC--CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALFAT-SIANNILLGKED--AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
|+|++.+|.+ |++||+.++... .+ .+++.++++..++.+++... ..+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRK-----------PSQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHHHH
Confidence 9999999975 999999875311 11 23445555555555554444 458999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
+.+|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999999999999999999999998864 8999999999999865 899999999999999998887653
No 469
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-40 Score=358.69 Aligned_cols=205 Identities=25% Similarity=0.509 Sum_probs=170.5
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
++++|+++.|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ..++.++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 478999999974 349999999999999999999999999999999999999999999999988753 45778999
Q ss_pred EeccCccCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000851 457 VSQEPALFAT-SIANNILLGKED--ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNP 533 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p 533 (1253)
++|++.++.. |++||+.++... ....+.. ..+.++++.+ |++........+||||||||++||||++.+|
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 147 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHDP 147 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcCC
Confidence 9999999875 999999874311 1111111 1122333333 4444445566789999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEee
Q 000851 534 KILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESG 594 (1253)
Q Consensus 534 ~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 594 (1253)
+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 148 ~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 148 ELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 9999999999999999999999999875 47899999999999865 8999999999998754
No 470
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-40 Score=368.73 Aligned_cols=218 Identities=32% Similarity=0.535 Sum_probs=182.6
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCC--CCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~~ 448 (1253)
.++++||+++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+..
T Consensus 4 ~l~i~~v~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGSF--HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECCE--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 48999999999753 499999999999999999999999999999999999974 79999999999853 3455
Q ss_pred HHhcccEEEeccCccCcc-cHHHHHhcCCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHH
Q 000851 449 WLREQMGLVSQEPALFAT-SIANNILLGKED---ASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 520 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~-ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~ 520 (1253)
.+|+.++|++|++.+|.. |++||+.++... ... +++.++++..++.+.+ .......+.+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-------KDRLDKPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHHH
Confidence 678899999999999874 999999875311 111 2333444444443222 2234556678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhh-hcCEEEEEe------CCEEEEe
Q 000851 521 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLK------NGQVVES 593 (1253)
Q Consensus 521 qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~-~~d~i~vl~------~G~i~~~ 593 (1253)
||++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|+ +|+|++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 999999999999999999999999999999999999999877899999999999986 489999997 8999999
Q ss_pred eCcchhhhc
Q 000851 594 GTHVDLISK 602 (1253)
Q Consensus 594 g~~~~l~~~ 602 (1253)
|+++++...
T Consensus 235 ~~~~~~~~~ 243 (258)
T PRK14241 235 DDTEKIFSN 243 (258)
T ss_pred CCHHHHHhC
Confidence 999988653
No 471
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=7.3e-40 Score=362.37 Aligned_cols=211 Identities=34% Similarity=0.526 Sum_probs=179.7
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
|+++|++++|+++ .+|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 i~i~~l~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGSF--QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECCe--eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 4789999999753 49999999999999999999999999999999999999999999999999876543 4678999
Q ss_pred EeccCccCcc-cHHHHHhcCCCCC--C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALFAT-SIANNILLGKEDA--S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
|+|++.+|++ |++||+.++.+.. + .+++.++++..++.++ ......+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGL-----------GDRYPNQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhCChhhCCHHHHHHHHHHHHH
Confidence 9999999975 9999998764311 1 1233334444443333 3344568999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
+++|+++||||||++||+++++.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999999998754 7999999999999866 899999999999999999988653
No 472
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-40 Score=370.44 Aligned_cols=219 Identities=28% Similarity=0.488 Sum_probs=184.2
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCC--CCH
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKS--LQL 447 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 447 (1253)
..|+++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.+ .+.
T Consensus 38 ~~l~i~~l~~~~~~~--~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGDE--QALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECCE--eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 358999999999743 49999999999999999999999999999999999997 689999999999864 345
Q ss_pred HHHhcccEEEeccCccCcccHHHHHhcCCCC-----CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHH
Q 000851 448 KWLREQMGLVSQEPALFATSIANNILLGKED-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQR 522 (1253)
Q Consensus 448 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qr 522 (1253)
..+++.++||+|++.+|..|++||+.++... ...+++.++++..++.+.+ ......++.+||||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LSgGe~qr 188 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEV-------KDQLDSSGLDLSGGQQQR 188 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchh-------HHHHhCCcccCCHHHHHH
Confidence 5678899999999999988999999875311 1123445555555443222 123456677999999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEE-EEeCCEEEEeeCcchhh
Q 000851 523 IAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIM-VLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 523 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~-vl~~G~i~~~g~~~~l~ 600 (1253)
++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+++ +|++|+|++.|+++++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998777899999999999876 89975 57999999999988876
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
.+
T Consensus 269 ~~ 270 (285)
T PRK14254 269 EN 270 (285)
T ss_pred hC
Confidence 53
No 473
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-40 Score=338.02 Aligned_cols=220 Identities=30% Similarity=0.475 Sum_probs=189.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-Hhcc
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRS-LRRK 1083 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~-lR~~ 1083 (1253)
-++++||+..|. ...+|+||||++++||+++++||||+||||++++|+|+.+|.+|+|.++|.||...+++. .|..
T Consensus 3 mL~v~~l~~~YG---~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYG---KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeeccc---ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 378999999996 356999999999999999999999999999999999999999999999999999998875 6889
Q ss_pred eEEEccCCCccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000851 1084 IGLVQQEPALFS-TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 1162 (1253)
Q Consensus 1084 i~~V~Qdp~Lf~-gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~ 1162 (1253)
|+||||...+|+ -||.|||..|.-...+++- ....+++.-+-+| -|......++.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~----~~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEA----QERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccc----ccccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 999999999997 5999999987422222111 1111223333445 355566677889999999999999999999
Q ss_pred CCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1163 PSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1163 p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
|++|+|||||.+|-|.--+.|.++|++..+ +.||+.|-++...... +||.+||++|+|+..|+.+||.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999874 6699999999998754 999999999999999999999984
No 474
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-40 Score=372.19 Aligned_cols=219 Identities=28% Similarity=0.458 Sum_probs=183.3
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCCC--CH
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKSL--QL 447 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~~ 447 (1253)
..|+++||+++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||.++... +.
T Consensus 38 ~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 38 PHVVAKNFSIYYGEF--EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred eEEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 358999999999743 49999999999999999999999999999999999864 4999999999998643 33
Q ss_pred HHHhcccEEEeccCccCcccHHHHHhcCCCC--C-C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHH
Q 000851 448 KWLREQMGLVSQEPALFATSIANNILLGKED--A-S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 520 (1253)
Q Consensus 448 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~ 520 (1253)
..+|++|+||+|++.+|+.|++||+.++... . + .+++.++++..++.+.+ .......+..||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEV-------SDRLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccch-------hhHhhCChhhCCHHHH
Confidence 4578899999999999988999999986321 1 1 12233444444432211 1233456678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchh
Q 000851 521 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 521 qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 599 (1253)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 899999999999999999988
Q ss_pred hhc
Q 000851 600 ISK 602 (1253)
Q Consensus 600 ~~~ 602 (1253)
..+
T Consensus 269 ~~~ 271 (286)
T PRK14275 269 FTN 271 (286)
T ss_pred HhC
Confidence 764
No 475
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-40 Score=366.97 Aligned_cols=202 Identities=30% Similarity=0.460 Sum_probs=171.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... ++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999963 4699999999999999999999999999999999999999999999999988642 34699
Q ss_pred EEccCCCccc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFS-TTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~-gTIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
|++|++.+|+ .|++||+.++.. ..+. +++.++++..++.+. ......+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGA-----------EKRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhH-----------hhCChhhCCHHHHHHHHHHHH
Confidence 9999999887 699999986421 1121 234445555544333 233456899999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEe--CCEEEEecCh
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQ--QGKVAEIGSH 1226 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~--~G~ive~Gt~ 1226 (1253)
|+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999999863 38999999999999865 99999998 5999998764
No 476
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=366.55 Aligned_cols=216 Identities=25% Similarity=0.410 Sum_probs=182.9
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCC--------CcEEEECCeeCCCCCHH
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT--------SGKILLDGHDLKSLQLK 448 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~--------~G~i~~~g~~~~~~~~~ 448 (1253)
|+++|++++|+++ .+|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...+..
T Consensus 2 l~~~nl~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRHR--AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECCE--eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 6899999999743 4999999999999999999999999999999999999998 99999999999887777
Q ss_pred HHhcccEEEeccCc-cCcccHHHHHhcCCCCC-C-----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPA-LFATSIANNILLGKEDA-S-----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~-lf~~ti~~ni~~g~~~~-~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.+++.++||+|++. +|..|++||+.++.... . .++.. ..+.+.++.+ |+++..+....+|||||||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 152 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDG-----EIAWQALALA--GATALVGRDVTTLSGGELA 152 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHH-----HHHHHHHHHc--CcHhhhcCCcccCCHHHHH
Confidence 88888999999986 56789999998863211 0 01100 1112233333 5555666777899999999
Q ss_pred HHHHHHHhc---------cCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhh-hcCEEEEEeCCE
Q 000851 522 RIAIARAVL---------RNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVR-DVDTIMVLKNGQ 589 (1253)
Q Consensus 522 riaiARal~---------~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~ 589 (1253)
|++|||||+ .+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+. .||++++|++|+
T Consensus 153 rv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~ 232 (272)
T PRK13547 153 RVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGA 232 (272)
T ss_pred HHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCe
Confidence 999999999 59999999999999999999999999998753 789999999999986 489999999999
Q ss_pred EEEeeCcchhhh
Q 000851 590 VVESGTHVDLIS 601 (1253)
Q Consensus 590 i~~~g~~~~l~~ 601 (1253)
+++.|++++++.
T Consensus 233 i~~~g~~~~~~~ 244 (272)
T PRK13547 233 IVAHGAPADVLT 244 (272)
T ss_pred EEEecCHHHHcC
Confidence 999999988865
No 477
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=6.5e-40 Score=365.13 Aligned_cols=210 Identities=26% Similarity=0.398 Sum_probs=173.4
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcc--CCCCCcEEEECCeeCCCCCHHHH-hcc
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRL--YEPTSGKILLDGHDLKSLQLKWL-REQ 453 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~--~~~~~G~i~~~g~~~~~~~~~~~-r~~ 453 (1253)
|+++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+ ++|++|+|.++|+++...+.... +..
T Consensus 1 l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVEDK--EILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECCE--EEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 4789999999743 499999999999999999999999999999999999 47999999999999987776554 456
Q ss_pred cEEEeccCccCcc-cHHHHHhcCCCC---------CCH----HHHHHHHHHhCcHHHHhcCCCCccc-cccCCCC-CCCh
Q 000851 454 MGLVSQEPALFAT-SIANNILLGKED---------ASM----DRVIEAAKAANAHSFVEGLPDGYQT-QVGEGGT-QLSG 517 (1253)
Q Consensus 454 i~~v~Q~~~lf~~-ti~~ni~~g~~~---------~~~----~~~~~~~~~~~~~~~i~~l~~g~~t-~~g~~g~-~LSg 517 (1253)
++||+|++.+|++ |++||+.+.... .+. +++.++++.. |++. ....... +|||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~~~LS~ 147 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALL-----------GMDEEFLNRSVNEGFSG 147 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHc-----------CCchhhcccccccCcCH
Confidence 9999999999876 999999764211 011 1222233322 2221 1223333 5999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh--cCEEEEEeCCEEEEee
Q 000851 518 GQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD--VDTIMVLKNGQVVESG 594 (1253)
Q Consensus 518 Gq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~--~d~i~vl~~G~i~~~g 594 (1253)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999885 47899999999999976 7999999999999999
Q ss_pred Ccchh
Q 000851 595 THVDL 599 (1253)
Q Consensus 595 ~~~~l 599 (1253)
+++++
T Consensus 228 ~~~~~ 232 (243)
T TIGR01978 228 DVELA 232 (243)
T ss_pred CHHHh
Confidence 88754
No 478
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-40 Score=368.01 Aligned_cols=220 Identities=29% Similarity=0.458 Sum_probs=186.9
Q ss_pred CCcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCC----C
Q 000851 374 AGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLK----S 444 (1253)
Q Consensus 374 ~~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~----~ 444 (1253)
.+.|+++|++++|++. ++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++. .
T Consensus 14 ~~~l~~~~l~~~~~~~--~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~ 91 (265)
T PRK14252 14 QQKSEVNKLNFYYGGY--QALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPE 91 (265)
T ss_pred CceEEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccccc
Confidence 4579999999999743 499999999999999999999999999999999999975 7999999998874 2
Q ss_pred CCHHHHhcccEEEeccCccCcccHHHHHhcCCC--CC-----CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCCh
Q 000851 445 LQLKWLREQMGLVSQEPALFATSIANNILLGKE--DA-----SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSG 517 (1253)
Q Consensus 445 ~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSg 517 (1253)
.+...+++.|+|++|++.+|..|++||+.++.. .. ..+++.++++.+++.+ ++.+..+....+|||
T Consensus 92 ~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~ 164 (265)
T PRK14252 92 VDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-------EVKDRLGDLAFNLSG 164 (265)
T ss_pred cCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-------hhhHHHhCCcccCCH
Confidence 344567889999999999998999999987631 11 1234455555554432 223445666789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCc
Q 000851 518 GQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTH 596 (1253)
Q Consensus 518 Gq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~ 596 (1253)
|||||++||||++++|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|++
T Consensus 165 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~~ 244 (265)
T PRK14252 165 GQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGAT 244 (265)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998778999999999999865 899999999999999999
Q ss_pred chhhhc
Q 000851 597 VDLISK 602 (1253)
Q Consensus 597 ~~l~~~ 602 (1253)
+++...
T Consensus 245 ~~~~~~ 250 (265)
T PRK14252 245 DTIFIK 250 (265)
T ss_pred HHHHhC
Confidence 888643
No 479
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=376.70 Aligned_cols=224 Identities=23% Similarity=0.368 Sum_probs=182.5
Q ss_pred EEEEEEEEECCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC----CCCcEEEECCeeCCCCCHHHH
Q 000851 377 IEFSEVCFAYPSR--PHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE----PTSGKILLDGHDLKSLQLKWL 450 (1253)
Q Consensus 377 i~~~~v~f~y~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~~~g~~~~~~~~~~~ 450 (1253)
++++|++++|+.. ...+|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++...+.+.+
T Consensus 4 L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (330)
T PRK15093 4 LDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRER 83 (330)
T ss_pred EEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 7899999999632 2349999999999999999999999999999999999986 589999999999988776554
Q ss_pred h----cccEEEeccCc--cCc-ccHHHHHhcCCC---C-----CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCC
Q 000851 451 R----EQMGLVSQEPA--LFA-TSIANNILLGKE---D-----AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEG 511 (1253)
Q Consensus 451 r----~~i~~v~Q~~~--lf~-~ti~~ni~~g~~---~-----~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~ 511 (1253)
+ +.|+||+|+|. ++. .||.+|+..... . .. .+++.+.++..++.+.- ......
T Consensus 84 ~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~~~~~ 155 (330)
T PRK15093 84 RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHK--------DAMRSF 155 (330)
T ss_pred HHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChH--------HHHhCC
Confidence 3 47999999996 333 489999864210 0 01 12344455555443210 123445
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCC
Q 000851 512 GTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNG 588 (1253)
Q Consensus 512 g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G 588 (1253)
+.+||||||||++|||||+.+|++||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 578999999999999999999999999999999999999999999999864 7899999999999965 8999999999
Q ss_pred EEEEeeCcchhhhcC-chHHH
Q 000851 589 QVVESGTHVDLISKG-GEYAA 608 (1253)
Q Consensus 589 ~i~~~g~~~~l~~~~-~~y~~ 608 (1253)
+|++.|+.+++.... ..|.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHH
Confidence 999999999987753 45654
No 480
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1e-39 Score=367.46 Aligned_cols=232 Identities=28% Similarity=0.449 Sum_probs=188.4
Q ss_pred EEEEeEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCH--
Q 000851 1006 IELRNVSFKYPVR------PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNL-- 1077 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~-- 1077 (1253)
|+++||+++|+.. .++++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 8899999999731 13579999999999999999999999999999999999999999999999999987765
Q ss_pred -HHHhcceEEEccCCC--cc-cccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccc-cccCCCCCCChhHHHH
Q 000851 1078 -RSLRRKIGLVQQEPA--LF-STTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQS-HVGDRGVQLSGGQKQR 1152 (1253)
Q Consensus 1078 -~~lR~~i~~V~Qdp~--Lf-~gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt-~vge~G~~LSgGQkQr 1152 (1253)
..+|+.++|++|++. ++ ..|+++|+.+...... .+........+.+.++.+ |+++ ..+.....||||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge~qr 159 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLL--SLDKAERLARASEMLRAV--DLDDSVLDKRPPQLSGGQLQR 159 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhc--cCCHHHHHHHHHHHHHHc--CCChhHhhCCCccCChHHHHH
Confidence 347889999999983 44 4699999864211000 000111122334455544 5653 4556678899999999
Q ss_pred HHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHH
Q 000851 1153 VAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQL 1229 (1253)
Q Consensus 1153 laLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eL 1229 (1253)
++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 160 l~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 239 (268)
T PRK10419 160 VCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDK 239 (268)
T ss_pred HHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhc
Confidence 9999999999999999999999999999999999998753 7899999999999975 999999999999999999999
Q ss_pred hhcccchHHHHHH
Q 000851 1230 LRKENGIYKQLIR 1242 (1253)
Q Consensus 1230 l~~~~g~y~~L~~ 1242 (1253)
.. ..+.|..-+.
T Consensus 240 ~~-~~~~~~~~~~ 251 (268)
T PRK10419 240 LT-FSSPAGRVLQ 251 (268)
T ss_pred cC-CCCHHHHHHH
Confidence 86 4555544443
No 481
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=6.7e-40 Score=382.15 Aligned_cols=212 Identities=31% Similarity=0.500 Sum_probs=179.0
Q ss_pred eEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCC----HHHHhcceE
Q 000851 1010 NVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLN----LRSLRRKIG 1085 (1253)
Q Consensus 1010 ~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~----~~~lR~~i~ 1085 (1253)
|++++|++ .. + |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|++++
T Consensus 4 ~l~~~~~~---~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 89999963 23 4 999999999999999999999999999999999999999999999986542 345688999
Q ss_pred EEccCCCcccc-cHHHHhccCCCCCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000851 1086 LVQQEPALFST-TIYENIKYGNEDASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAIL 1160 (1253)
Q Consensus 1086 ~V~Qdp~Lf~g-TIreNl~~g~~~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALl 1160 (1253)
||+|++.+|+. |++||+.++...... +.+.+.++..++.+ .......+||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGH-----------LLGRLPGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChh-----------HhcCChhhCCHHHHHHHHHHHHHH
Confidence 99999999975 999999986432221 22444444444433 344445689999999999999999
Q ss_pred cCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhcccchH
Q 000851 1161 KNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRKENGIY 1237 (1253)
Q Consensus 1161 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~~~g~y 1237 (1253)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...++..|
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 99999999999999999999999999998753 7899999999999865 99999999999999999999987655444
No 482
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.1e-40 Score=369.47 Aligned_cols=214 Identities=30% Similarity=0.535 Sum_probs=185.2
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccE
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMG 455 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 455 (1253)
.++++|++++|+. ...+|+||||+|++||++|++||||||||||+++|+|+..|++|+|.++|.+...- ....|++||
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999973 13499999999999999999999999999999999999999999999999998755 677888999
Q ss_pred EEeccCccCcc-cHHHHHhcC-----CCC-CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000851 456 LVSQEPALFAT-SIANNILLG-----KED-ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARA 528 (1253)
Q Consensus 456 ~v~Q~~~lf~~-ti~~ni~~g-----~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARa 528 (1253)
||||+|.+++. |++||+.|. .+. ...+++.+.++..++.+.- ......||+|||||++||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHHH
Confidence 99999998876 999999873 221 2245666777666554311 33456899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC-C-CeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 529 VLRNPKILLLDEATSALDAESELIVQRALEKIMS-N-RTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 529 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~-~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|+.+|++|||||||++|||.+...+.+.|+++.+ + +|++++||.++.+.. ||+|++|++|+++..|+.+++...
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999999865 4 799999999999987 899999999999999988886543
No 483
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-40 Score=366.53 Aligned_cols=218 Identities=33% Similarity=0.533 Sum_probs=181.1
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCC-----CcEEEECCeeCCC--CCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT-----SGKILLDGHDLKS--LQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~~~ 448 (1253)
-++++||+|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.+ .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 3789999999974 34999999999999999999999999999999999999874 8999999999864 3445
Q ss_pred HHhcccEEEeccCccCcc-cHHHHHhcCCCC--C-CHHHHHHH----HHHhCcHHHHhcCCCCccccccCCCCCCChHHH
Q 000851 449 WLREQMGLVSQEPALFAT-SIANNILLGKED--A-SMDRVIEA----AKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 520 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~-ti~~ni~~g~~~--~-~~~~~~~~----~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~ 520 (1253)
.+|+.|+|++|++.+|.. |+.||+.++... . ..++..+. ++..++.+. +++ .....+.+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~---l~~----~~~~~~~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE---VKD----RLKTPATGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh---hhh----hhcCCcccCCHHHH
Confidence 678889999999999885 999999875321 1 22222222 222222221 112 22344678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchh
Q 000851 521 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDL 599 (1253)
Q Consensus 521 qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 599 (1253)
||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999886 899999999999999999998
Q ss_pred hhc
Q 000851 600 ISK 602 (1253)
Q Consensus 600 ~~~ 602 (1253)
+..
T Consensus 235 ~~~ 237 (252)
T PRK14272 235 FTN 237 (252)
T ss_pred HhC
Confidence 764
No 484
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=331.59 Aligned_cols=213 Identities=31% Similarity=0.538 Sum_probs=183.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||++++|..++.|++|+|+|||.|+.+ ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 678999999984 3348999999999999999999999999999999999999999999999999877 5678899999
Q ss_pred EEccCCCccc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000851 1086 LVQQEPALFS-TTIYENIKYGNE--DASE----IELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARA 1158 (1253)
Q Consensus 1086 ~V~Qdp~Lf~-gTIreNl~~g~~--~~~d----~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARA 1158 (1253)
+++-+.-|+. -|.||||.|... +.++ .++.+.-+..++.++. |..+| +||-|+|||++||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~-------~rRv~----~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYL-------DRRVG----EFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHH-------HHHHh----hhchhhHHHHHHHHH
Confidence 9997777876 599999988632 1222 2333334444444443 34444 599999999999999
Q ss_pred hccCCCEEEEecccCCCChHHHHHHHHHHHHHcC-CceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1159 ILKNPSILLLDEATSALDTASENLIQEALDKLME-GRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1159 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
|+++|+|++||||||+||..+.+.+++-+.+... |++||.-||.++.++. ||+|+++.+|+++..|+++++.++
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999999999865 9999999999999985 999999999999999999999874
No 485
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.4e-40 Score=370.68 Aligned_cols=214 Identities=34% Similarity=0.565 Sum_probs=187.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcce
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKI 1084 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i 1084 (1253)
.++++||+.+|.. +..+|+||||+|++||.+|++||||||||||+++|+|+..|++|+|.++|.|...- ...+|+++
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4789999999962 34699999999999999999999999999999999999999999999999998765 77899999
Q ss_pred EEEccCCCcccc-cHHHHhccCC-----C-CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHH
Q 000851 1085 GLVQQEPALFST-TIYENIKYGN-----E-DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIAR 1157 (1253)
Q Consensus 1085 ~~V~Qdp~Lf~g-TIreNl~~g~-----~-~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLAR 1157 (1253)
|||||+|.+++. |++|||.+.. + ...++.+.+.++..++.+.- ......||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHH
Confidence 999999998864 9999998742 1 12245677778777775421 2334579999999999999
Q ss_pred HhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC-C-ceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhHHhhc
Q 000851 1158 AILKNPSILLLDEATSALDTASENLIQEALDKLME-G-RTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQLLRK 1232 (1253)
Q Consensus 1158 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~-~-~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~eLl~~ 1232 (1253)
||+.+|++|||||||++||+.+...+.+.|+++.+ + +||++.||.++.+.. ||+|++|++|+++..|+++++.+.
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999865 5 799999999999987 999999999999999999998763
No 486
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=365.90 Aligned_cols=218 Identities=30% Similarity=0.458 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCC--CCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKS--LQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~~ 448 (1253)
-|+++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+..
T Consensus 20 ~l~~~nl~~~~~~~--~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~ 97 (274)
T PRK14265 20 VFEVEGVKVFYGGF--LALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSV 97 (274)
T ss_pred eEEEeeEEEEeCCe--EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhH
Confidence 69999999999743 499999999999999999999999999999999999863 69999999999864 3445
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCCC-----CHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKEDA-----SMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 523 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qri 523 (1253)
.+|+.|+|++|++.+|+.|+.||+.++.... .++++.++++.+++.+++. ......+.+||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qrv 170 (274)
T PRK14265 98 KLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVK-------DKLKEKGTALSGGQQQRL 170 (274)
T ss_pred HHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhH-------HHhcCCcccCCHHHHHHH
Confidence 6788999999999999889999998863211 1233444555555543332 234456678999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEe---------CCEEEEe
Q 000851 524 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLK---------NGQVVES 593 (1253)
Q Consensus 524 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~---------~G~i~~~ 593 (1253)
+|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 171 ~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~ 250 (274)
T PRK14265 171 CIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEF 250 (274)
T ss_pred HHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999998778999999999999865 89999998 8999999
Q ss_pred eCcchhhhc
Q 000851 594 GTHVDLISK 602 (1253)
Q Consensus 594 g~~~~l~~~ 602 (1253)
|+.+++...
T Consensus 251 g~~~~~~~~ 259 (274)
T PRK14265 251 SPTEQMFGS 259 (274)
T ss_pred CCHHHHHhC
Confidence 999998654
No 487
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=363.83 Aligned_cols=218 Identities=31% Similarity=0.503 Sum_probs=186.4
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCCC--CHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKSL--QLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~~~ 448 (1253)
.++++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||+++.+. +..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999974 349999999999999999999999999999999999864 4899999999998653 455
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCC--C-C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKED--A-S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.+++.++||+|++.+|+.|++||+.++... . + .+++.++++..++.+++.. ..+..+.+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKD-------KLDKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHH-------HHhCCcccCCHHHHH
Confidence 678899999999999999999999875321 1 1 1334556666666554432 234567789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. +|++++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999998876 7999999999999999999886
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 234 ~~ 235 (250)
T PRK14266 234 IN 235 (250)
T ss_pred hC
Confidence 54
No 488
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=365.48 Aligned_cols=219 Identities=30% Similarity=0.498 Sum_probs=185.5
Q ss_pred CcEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCC-----CcEEEECCeeCCC--CCH
Q 000851 375 GQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPT-----SGKILLDGHDLKS--LQL 447 (1253)
Q Consensus 375 ~~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~~ 447 (1253)
+.|+++||+|+|++. .+|+|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.. .+.
T Consensus 6 ~~l~~~nl~~~~~~~--~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDTQ--KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCCe--eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 469999999999743 4999999999999999999999999999999999999985 8999999999853 344
Q ss_pred HHHhcccEEEeccCccCcccHHHHHhcCCCC---CC----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHH
Q 000851 448 KWLREQMGLVSQEPALFATSIANNILLGKED---AS----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQK 520 (1253)
Q Consensus 448 ~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~---~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~ 520 (1253)
..+|+.++|++|++.+|+.|++||+.++... .+ .+++.++++..++.+++. ...++.+.+||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIK-------HKIHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhh-------hHhcCCcccCCHHHH
Confidence 5678899999999999999999999875211 01 123445555555443332 234566779999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEccCchhhhh-cCEEEEEeC-----CEEEE
Q 000851 521 QRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIM--SNRTTIVVAHRLSTVRD-VDTIMVLKN-----GQVVE 592 (1253)
Q Consensus 521 qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~-----G~i~~ 592 (1253)
||++||||++++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++ |++++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999999864 48999999999999875 899999999 99999
Q ss_pred eeCcchhhhc
Q 000851 593 SGTHVDLISK 602 (1253)
Q Consensus 593 ~g~~~~l~~~ 602 (1253)
.|+++++...
T Consensus 237 ~~~~~~~~~~ 246 (261)
T PRK14258 237 FGLTKKIFNS 246 (261)
T ss_pred eCCHHHHHhC
Confidence 9999998654
No 489
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.5e-39 Score=364.95 Aligned_cols=218 Identities=26% Similarity=0.434 Sum_probs=181.3
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCee-----CCCCCHHH-
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHD-----LKSLQLKW- 449 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~-----~~~~~~~~- 449 (1253)
-++++|++++|+++ .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGPR--KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCCc--eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 48999999999753 49999999999999999999999999999999999999999999999998 77665543
Q ss_pred ---HhcccEEEeccCc--cCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhCcHHHHhcCCCCcc-ccccCCCCCCChHH
Q 000851 450 ---LREQMGLVSQEPA--LFA-TSIANNILLGK---EDASMDRVIEAAKAANAHSFVEGLPDGYQ-TQVGEGGTQLSGGQ 519 (1253)
Q Consensus 450 ---~r~~i~~v~Q~~~--lf~-~ti~~ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgGq 519 (1253)
+++.++||+|++. ++. .|+.+|+.+.. ......+..+ .++++++.+ |++ +..+..+.+|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~Gq 156 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGGM 156 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHHH
Confidence 3567999999984 443 48899986421 0111122211 234555555 343 45667788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCc
Q 000851 520 KQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTH 596 (1253)
Q Consensus 520 ~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~ 596 (1253)
|||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~ 236 (258)
T PRK11701 157 QQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLT 236 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999998753 7899999999999975 899999999999999999
Q ss_pred chhhhc
Q 000851 597 VDLISK 602 (1253)
Q Consensus 597 ~~l~~~ 602 (1253)
+++..+
T Consensus 237 ~~~~~~ 242 (258)
T PRK11701 237 DQVLDD 242 (258)
T ss_pred HHHhcC
Confidence 998754
No 490
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.7e-39 Score=353.84 Aligned_cols=202 Identities=33% Similarity=0.552 Sum_probs=174.5
Q ss_pred EEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEE
Q 000851 377 IEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGL 456 (1253)
Q Consensus 377 i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 456 (1253)
++++||+++|+. .++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.+.+ .+++.++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999962 578999999999999999999999999999999999999999999999987543 35678999
Q ss_pred EeccCccCcc-cHHHHHhcCC-CC-----CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000851 457 VSQEPALFAT-SIANNILLGK-ED-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAV 529 (1253)
Q Consensus 457 v~Q~~~lf~~-ti~~ni~~g~-~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal 529 (1253)
|+|++.+|.. |++||+.++. +. ...+++.++++..++.+...+.| .+||||||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999875 9999998642 11 12335566667666665555544 48999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeC
Q 000851 530 LRNPKILLLDEATSALDAESELIVQRALEKIMS--NRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGT 595 (1253)
Q Consensus 530 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 595 (1253)
+.+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998753 7899999999999865 89999999999999874
No 491
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=364.67 Aligned_cols=218 Identities=29% Similarity=0.443 Sum_probs=187.4
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCC-----CCcEEEECCeeCCCC--CHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEP-----TSGKILLDGHDLKSL--QLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~~ 448 (1253)
.+.+++.+++|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++... +..
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999964 3499999999999999999999999999999999999987 799999999998643 344
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCC-----CCHHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKED-----ASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRI 523 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qri 523 (1253)
.+|+.|+|++|++.+|+.|+.||+.++... ...+++.++++..++.+.+.. ..++.+.+||||||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHHH
Confidence 677889999999999989999999886421 112456666666665444322 23456778999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEe--------CCEEEEee
Q 000851 524 AIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLK--------NGQVVESG 594 (1253)
Q Consensus 524 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~--------~G~i~~~g 594 (1253)
+||||++++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999998778999999999998865 89999996 89999999
Q ss_pred Ccchhhhc
Q 000851 595 THVDLISK 602 (1253)
Q Consensus 595 ~~~~l~~~ 602 (1253)
+++++++.
T Consensus 239 ~~~~~~~~ 246 (261)
T PRK14263 239 PTAQIFQN 246 (261)
T ss_pred CHHHHHhC
Confidence 99998764
No 492
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=8.7e-40 Score=374.19 Aligned_cols=204 Identities=25% Similarity=0.457 Sum_probs=172.4
Q ss_pred ECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECCeeCCCCCHHHHhcccEEEeccCccC
Q 000851 385 AYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALF 464 (1253)
Q Consensus 385 ~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf 464 (1253)
+|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++||||+|++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4653 349999999999999999999999999999999999999999999999999875 3456788899999999998
Q ss_pred cc-cHHHHHhcCCC--CCCH----HHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEE
Q 000851 465 AT-SIANNILLGKE--DASM----DRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILL 537 (1253)
Q Consensus 465 ~~-ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~qriaiARal~~~p~ili 537 (1253)
.. |++||+.+... ..+. +++.++++..++ +........+||||||||++|||||+.+|++||
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFEL-----------GEAADRPVGTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------hhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 76 99999987421 1111 223334444433 333344556899999999999999999999999
Q ss_pred EeCcCCCCCHHHHHHHHHHHHHHc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhhhc
Q 000851 538 LDEATSALDAESELIVQRALEKIM-SNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLISK 602 (1253)
Q Consensus 538 lDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 602 (1253)
|||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999999885 47899999999999875 899999999999999999988654
No 493
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-40 Score=349.82 Aligned_cols=224 Identities=35% Similarity=0.595 Sum_probs=195.9
Q ss_pred cEEEEeEEEECCCCCCc---------------------ccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCcc
Q 000851 1005 NIELRNVSFKYPVRPDI---------------------TIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISG 1063 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~---------------------~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G 1063 (1253)
.|+++||+.-+..++.. --++|+||+|+.||+.-|.|-||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 48888888877643321 127999999999999999999999999999999999999999
Q ss_pred EEEECCccCCCCCHHHH----hcceEEEccCCCccc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcHHHHHHhCCC
Q 000851 1064 TVLIDGYDIRTLNLRSL----RRKIGLVQQEPALFS-TTIYENIKYGNE--DAS----EIELMKATKAANAHGFISRMPE 1132 (1253)
Q Consensus 1064 ~I~idG~di~~i~~~~l----R~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~----d~ei~~al~~a~l~~~I~~lp~ 1132 (1253)
+|++||.|+..++.++| |++++.|+|.--||+ .||.||..||.+ ..+ .+...++++.+|+.+|-.+.|
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp- 162 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP- 162 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc-
Confidence 99999999999998776 457999999999987 599999999853 122 344667899999999988877
Q ss_pred CccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhh-hcc
Q 000851 1133 GYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTI-RNA 1209 (1253)
Q Consensus 1133 gldt~vge~G~~LSgGQkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti-~~~ 1209 (1253)
.+||||+|||+.|||||..+|+|||+|||.|+|||--+..+|+.|.++.+ ++|+++|||+|++. +--
T Consensus 163 ----------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 163 ----------NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred ----------ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 47999999999999999999999999999999999999999999988653 78999999999986 559
Q ss_pred CEEEEEeCCEEEEecChhHHhhcccchHHH
Q 000851 1210 DKIAVLQQGKVAEIGSHEQLLRKENGIYKQ 1239 (1253)
Q Consensus 1210 D~I~Vl~~G~ive~Gt~~eLl~~~~g~y~~ 1239 (1253)
|||..|++|+|+..|||+|++.++...|-+
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~ 262 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVR 262 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHH
Confidence 999999999999999999999877655543
No 494
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=363.25 Aligned_cols=218 Identities=29% Similarity=0.484 Sum_probs=183.6
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCCCCCcEEEECC------eeCCCCCHHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKILLDG------HDLKSLQLKW 449 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g------~~~~~~~~~~ 449 (1253)
-++++|++++|+++ .+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| +++...+...
T Consensus 10 ~i~~~~~~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 10 VFNISRLYLYINDK--AILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred heeeeeEEEecCCc--eeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 58999999999753 499999999999999999999999999999999999999997766665 5666667777
Q ss_pred HhcccEEEeccCccCcc-cHHHHHhcCCCC--C-CHH----HHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 450 LREQMGLVSQEPALFAT-SIANNILLGKED--A-SMD----RVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 450 ~r~~i~~v~Q~~~lf~~-ti~~ni~~g~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
+|+.++|++|++.+|.+ |++||+.++... . ..+ ++.++++..++++++ ....++.+..|||||||
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~q 160 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEV-------YDRLNSPASQLSGGQQQ 160 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccc-------hhhhcCCcccCCHHHHH
Confidence 88999999999999976 999999976321 1 222 233444444443222 12344567789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhh-hcCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVR-DVDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++.+|+++||||||++||+.+++.+.+.|.++.+++|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 161 rl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 161 RLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999877899999999999995 58999999999999999999987
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 241 ~~ 242 (257)
T PRK14246 241 TS 242 (257)
T ss_pred hC
Confidence 65
No 495
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.2e-39 Score=356.86 Aligned_cols=204 Identities=31% Similarity=0.468 Sum_probs=173.6
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHH---HHh
Q 000851 1006 IELRNVSFKYPVRP-DITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLR---SLR 1081 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~---~lR 1081 (1253)
++++||+++|+... ..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996321 25699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cceEEEccCCCccc-ccHHHHhccCCC---CCCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHH
Q 000851 1082 RKIGLVQQEPALFS-TTIYENIKYGNE---DASEI----ELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRV 1153 (1253)
Q Consensus 1082 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~---~~~d~----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrl 1153 (1253)
+.++|+||+|.+|. .|+.||+.++.. ..+.+ ++.++++..++.+++. ....+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLD-----------YYPHNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHH
Confidence 89999999999998 699999986531 12222 3444455555444443 34468999999999
Q ss_pred HHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEccCchhhhccCEEEEEeCCEE
Q 000851 1154 AIARAILKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVAHRLSTIRNADKIAVLQQGKV 1220 (1253)
Q Consensus 1154 aLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~i 1220 (1253)
+|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999998753 7999999999997777999999999986
No 496
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=364.12 Aligned_cols=218 Identities=29% Similarity=0.467 Sum_probs=181.9
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC--C---CCcEEEECCeeCCC--CCHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE--P---TSGKILLDGHDLKS--LQLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~--~~~~ 448 (1253)
-|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999974 349999999999999999999999999999999999975 5 59999999999864 3345
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCC--CC-C----HHHHHHHHHHhCcHHHHhcCCCCccccccCCCCCCChHHHH
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKE--DA-S----MDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLSGGQKQ 521 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq~q 521 (1253)
.+++.++|++|++.+|+.|+++|+.++.. .. . .+++.++++..++.+. ........+.+|||||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------i~~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDE-------VKDHLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccc-------hhhHHhcCcccCCHHHHH
Confidence 67788999999999998999999987521 11 1 1223333444433222 223345566799999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEeeCcchhh
Q 000851 522 RIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTIMVLKNGQVVESGTHVDLI 600 (1253)
Q Consensus 522 riaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 600 (1253)
|++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+..+..
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999998777899999999999865 8999999999999999888776
Q ss_pred hc
Q 000851 601 SK 602 (1253)
Q Consensus 601 ~~ 602 (1253)
..
T Consensus 236 ~~ 237 (252)
T PRK14255 236 LN 237 (252)
T ss_pred cC
Confidence 54
No 497
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.3e-39 Score=357.38 Aligned_cols=205 Identities=28% Similarity=0.464 Sum_probs=177.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCccCCCCCHHHHhcceE
Q 000851 1006 IELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIG 1085 (1253)
Q Consensus 1006 I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~di~~i~~~~lR~~i~ 1085 (1253)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.... ++.++
T Consensus 1 l~l~~v~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~ 73 (223)
T TIGR03740 1 LETKNLSKRFGK---QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIG 73 (223)
T ss_pred CEEEeEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEE
Confidence 478999999973 46999999999999999999999999999999999999999999999999875322 35799
Q ss_pred EEccCCCccc-ccHHHHhccCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000851 1086 LVQQEPALFS-TTIYENIKYGNE--DASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKN 1162 (1253)
Q Consensus 1086 ~V~Qdp~Lf~-gTIreNl~~g~~--~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARALlr~ 1162 (1253)
|+||++.+|. .|++||+.++.. ..+++++.++++..++.+.... ...+||||||||++||||++++
T Consensus 74 ~~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~~rv~laral~~~ 142 (223)
T TIGR03740 74 SLIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKK-----------KAKQFSLGMKQRLGIAIALLNH 142 (223)
T ss_pred EEcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhh-----------hHhhCCHHHHHHHHHHHHHhcC
Confidence 9999999886 699999975321 2245566777777776554332 3357999999999999999999
Q ss_pred CCEEEEecccCCCChHHHHHHHHHHHHHc-CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecChhH
Q 000851 1163 PSILLLDEATSALDTASENLIQEALDKLM-EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGSHEQ 1228 (1253)
Q Consensus 1163 p~ILlLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt~~e 1228 (1253)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++.+
T Consensus 143 p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 143 PKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999999999875 47899999999999865 99999999999999999865
No 498
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.7e-39 Score=362.08 Aligned_cols=227 Identities=28% Similarity=0.423 Sum_probs=184.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCCCCccEEEECCcc-----CCCCCHHH
Q 000851 1005 NIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYD-----IRTLNLRS 1079 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~p~~G~I~idG~d-----i~~i~~~~ 1079 (1253)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +..++...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (253)
T TIGR02323 3 LLQVSGLSKSYGG---GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAE 79 (253)
T ss_pred eEEEeeeEEEeCC---ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHH
Confidence 4899999999963 358999999999999999999999999999999999999999999999988 77666543
Q ss_pred ----HhcceEEEccCCC--c-ccccHHHHhccCC---CCCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChh
Q 000851 1080 ----LRRKIGLVQQEPA--L-FSTTIYENIKYGN---EDASEIELMKATKAANAHGFISRMPEGYQ-SHVGDRGVQLSGG 1148 (1253)
Q Consensus 1080 ----lR~~i~~V~Qdp~--L-f~gTIreNl~~g~---~~~~d~ei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSgG 1148 (1253)
+++.++|++|+|. + +..|+.+|+.... ......+. ...+.++++.+ |++ +........||||
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~LSgG 152 (253)
T TIGR02323 80 RRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEV--EIDPTRIDDLPRAFSGG 152 (253)
T ss_pred HHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHc--CCChhhhhcCchhcCHH
Confidence 3467999999985 2 3458888875310 00011111 12334555555 333 3556667889999
Q ss_pred HHHHHHHHHHhccCCCEEEEecccCCCChHHHHHHHHHHHHHc--CCceEEEEccCchhhhc-cCEEEEEeCCEEEEecC
Q 000851 1149 QKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLM--EGRTTIMVAHRLSTIRN-ADKIAVLQQGKVAEIGS 1225 (1253)
Q Consensus 1149 QkQrlaLARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~ive~Gt 1225 (1253)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. .+.|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 153 ~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~ 232 (253)
T TIGR02323 153 MQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGL 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999999999999864 37899999999999975 99999999999999999
Q ss_pred hhHHhhcccchHHHHH
Q 000851 1226 HEQLLRKENGIYKQLI 1241 (1253)
Q Consensus 1226 ~~eLl~~~~g~y~~L~ 1241 (1253)
++++..++...|.+++
T Consensus 233 ~~~~~~~~~~~~~~~~ 248 (253)
T TIGR02323 233 TDQVLDDPQHPYTQLL 248 (253)
T ss_pred HHHHhcCCCCHHHHHH
Confidence 9999865444555443
No 499
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-39 Score=350.05 Aligned_cols=191 Identities=25% Similarity=0.389 Sum_probs=164.1
Q ss_pred cEEEEeEEEECCCC-CCcccccceeEEEeCCcEEEEEcCCCCcHHHHHHHHhccCC---CCccEEEECCccCCCCCHHHH
Q 000851 1005 NIELRNVSFKYPVR-PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYD---PISGTVLIDGYDIRTLNLRSL 1080 (1253)
Q Consensus 1005 ~I~~~~Vsf~Y~~~-~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTL~~lL~r~~~---p~~G~I~idG~di~~i~~~~l 1080 (1253)
.+.++||+|.|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 37899999999853 35679999999999999999999999999999999999999 89999999999988764 457
Q ss_pred hcceEEEccCCCccc-ccHHHHhccCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000851 1081 RRKIGLVQQEPALFS-TTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAI 1159 (1253)
Q Consensus 1081 R~~i~~V~Qdp~Lf~-gTIreNl~~g~~~~~d~ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSgGQkQrlaLARAL 1159 (1253)
|++++|++|++.+|. .|++||+.++.. . . ..+....||||||||++|||||
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~------~----~------------------~~~~~~~LS~Ge~qrl~laral 133 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALR------C----K------------------GNEFVRGISGGERKRVSIAEAL 133 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhh------h----c------------------cccchhhCCHHHHHHHHHHHHH
Confidence 889999999998887 599999986421 0 0 1223457999999999999999
Q ss_pred ccCCCEEEEecccCCCChHHHHHHHHHHHHHcC--CceEEEEc-cCchhhh-ccCEEEEEeCCEEEEec
Q 000851 1160 LKNPSILLLDEATSALDTASENLIQEALDKLME--GRTTIMVA-HRLSTIR-NADKIAVLQQGKVAEIG 1224 (1253)
Q Consensus 1160 lr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~Ia-Hrl~ti~-~~D~I~Vl~~G~ive~G 1224 (1253)
+++|++|||||||++||+++++.+.+.|++..+ ++|+|+++ |+++.+. .||++++|++|++++.|
T Consensus 134 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 134 VSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999999998754 56766665 5556764 59999999999999865
No 500
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=371.14 Aligned_cols=218 Identities=28% Similarity=0.477 Sum_probs=184.9
Q ss_pred cEEEEEEEEECCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHccCC-----CCCcEEEECCeeCCCC--CHH
Q 000851 376 QIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYE-----PTSGKILLDGHDLKSL--QLK 448 (1253)
Q Consensus 376 ~i~~~~v~f~y~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~~~ 448 (1253)
.|+++|++++|+++ .+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++... +..
T Consensus 45 ~l~i~nl~~~~~~~--~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~~ 122 (305)
T PRK14264 45 KLSVEDLDVYYGDD--HALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNLV 122 (305)
T ss_pred eEEEEEEEEEeCCe--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccHH
Confidence 58999999999753 49999999999999999999999999999999999986 6899999999998643 355
Q ss_pred HHhcccEEEeccCccCcccHHHHHhcCCCCC-------------------CHHHHHHHHHHhCcHHHHhcCCCCcccccc
Q 000851 449 WLREQMGLVSQEPALFATSIANNILLGKEDA-------------------SMDRVIEAAKAANAHSFVEGLPDGYQTQVG 509 (1253)
Q Consensus 449 ~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~-------------------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g 509 (1253)
.+|+.|+||+|++.+|+.|++||+.++.... ..+++.++++..+ +++++++...
T Consensus 123 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~ 195 (305)
T PRK14264 123 ELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAA-------LWDEVNDRLD 195 (305)
T ss_pred HHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcC-------CchhhhHHhc
Confidence 6788999999999999999999999763210 0122333333333 3334455667
Q ss_pred CCCCCCChHHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcCCCeEEEEccCchhhhh-cCEE-EEEeC
Q 000851 510 EGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRD-VDTI-MVLKN 587 (1253)
Q Consensus 510 ~~g~~LSgGq~qriaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i-~vl~~ 587 (1253)
..+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++ ++|++
T Consensus 196 ~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~ 275 (305)
T PRK14264 196 DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTG 275 (305)
T ss_pred CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecC
Confidence 778899999999999999999999999999999999999999999999998777999999999999865 8997 56799
Q ss_pred CEEEEeeCcchhhhc
Q 000851 588 GQVVESGTHVDLISK 602 (1253)
Q Consensus 588 G~i~~~g~~~~l~~~ 602 (1253)
|++++.|+++++...
T Consensus 276 G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 276 GELVEYDDTDKIFEN 290 (305)
T ss_pred CEEEEeCCHHHHHhC
Confidence 999999999888653
Done!