Query 000851
Match_columns 1253
No_of_seqs 400 out of 4592
Neff 8.2
Searched_HMMs 29240
Date Tue Mar 26 18:05:52 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000851.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_619-623//hhsearch_pdb/000851hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1770.7 133.4 1215 29-1248 54-1320(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1556.7 119.1 1218 29-1249 27-1275(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 852.2 73.1 578 665-1245 58-654 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 780.9 59.4 577 667-1246 33-627 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 736.4 64.0 571 34-615 22-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 735.0 70.8 570 37-615 11-580 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 730.3 65.9 571 37-613 2-576 (578)
8 3qf4_B Uncharacterized ABC tra 1.0 1 1 729.7 65.8 572 667-1248 23-594 (598)
9 3qf4_A ABC transporter, ATP-bi 1.0 1 1 728.8 71.9 569 671-1247 13-581 (587)
10 4a82_A Cystic fibrosis transme 1.0 1 1 726.0 68.0 571 670-1245 3-577 (578)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1770.75 Aligned_cols=1215 Identities=37% Similarity=0.569 Sum_probs=1055.8
Q ss_pred CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------------C---CCCHHHH
Q ss_conf 78776317999999621456889999999999999667899999999998832378-------------9---9610143
Q 000851 29 PSKKQSGSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLS-------------S---HPHRLTS 92 (1253)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~-------------~---~~~~~~~ 92 (1253)
+++..+..++++|+|+++++++++++|++++++.|+..|++++++|+++|.+.... . ....+..
T Consensus 54 ~~~~~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (1321)
T 4f4c_A 54 EEVVNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEH 133 (1321)
T ss_dssp -CCSSCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHH
T ss_pred HCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 02568779999731567678999999999999999999999999999999997010001454300034431001689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 58999999999999999999999999999999999999999999998099223502688118999999789999999989
Q 000851 93 RISEHALYLVYLGLVALVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGD 172 (1253)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~g~l~~~~~~D~~~i~~~~~~ 172 (1253)
.+...++++++++++.+++.+++.++|.+.++|+..++|.++|+|++++|++|||+ .++|++++|+++|++.+++++.+
T Consensus 134 ~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~-~~~G~l~sr~~~D~~~i~~~~~~ 212 (1321)
T 4f4c_A 134 DVMNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDT-NHSGTLATKLFDNLERVKEGTGD 212 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH-TCCTTHHHHHHHHHHHHHHTSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-CCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999997889899879-98489999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999989999999999999897889999999999999999999999989999999999999999999993699999981
Q 000851 173 KTGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFV 252 (1253)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~ 252 (1253)
.++.++..+..++++++++|+++|.++++.++.+|++.++...+.++.++..++.++..++.++.+.|.++|+++||+|+
T Consensus 213 ~l~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~ 292 (1321)
T 4f4c_A 213 KIGMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLN 292 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999998999999999999999999999999999999999999999999999998399999821
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 09999999999999999998999999999999999999999999999999999809889678999999999999999999
Q 000851 253 GEAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQA 332 (1253)
Q Consensus 253 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~ 332 (1253)
+|+.+.++|.+..++..+...+.....+...+...++.++.+++++|+|++++.+|.+++|.+++++.+......++..+
T Consensus 293 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~ 372 (1321)
T 4f4c_A 293 GLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLA 372 (1321)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 42999999999999999999999999999999999999999999999999999959986999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC-CCCCCCCEEEEECCCEEEEEC
Q ss_conf 9999999999999999999972247898999998987899877589987899889999-964112028883899999985
Q 000851 333 APNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVG 411 (1253)
Q Consensus 333 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~-~~~l~~i~l~i~~g~~~~ivG 411 (1253)
.+.+..++++.++++|++++++.++..++. .+......+..+.|+|+||+|+||+++ .++|+|+||++++|++++|||
T Consensus 373 ~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~-~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG 451 (1321)
T 4f4c_A 373 GPQLAVLGTAQGAASGIYEVLDRKPVIDSS-SKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVG 451 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCSSCS-SSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEE
T ss_conf 999999999999999999997178534566-6556567788876799985540799998743333188622882789980
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 89993899999997158899758999996179988888740037880467668123899973399999999999999981
Q 000851 412 PSGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAA 491 (1253)
Q Consensus 412 ~sGsGKSTl~~ll~g~~~~~~G~i~i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~ 491 (1253)
|||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+||||++||+|||++|++++++++++++|+.+
T Consensus 452 ~sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a 531 (1321)
T 4f4c_A 452 SSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMA 531 (1321)
T ss_dssp CSSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHC
T ss_conf 58985778888754565164486157996501125999850466658753320786167886415522099999999875
Q ss_pred CCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 71888861998754412589987896899999999984249988898376888899989999999998708973999814
Q 000851 492 NAHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAH 571 (1253)
Q Consensus 492 ~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqrialARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH 571 (1253)
++++||+.||+||+|.+||+|.+||||||||||||||+|++|+|+|||||||+||+++|+.+++++.++.++||+|+|||
T Consensus 532 ~l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaH 611 (1321)
T 4f4c_A 532 NAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAH 611 (1321)
T ss_dssp TCHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECS
T ss_pred CCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 65468870888886075589887777787999999987259998998455446887899999999999847988999736
Q ss_pred CCHHHHHCCEEEEEECCEEEEEECCCHHHHCCCHHHHHHHHHHCCCCC-----CCC---CC---CC--CCCC--CCCCCC
Q ss_conf 923544049899996978988407202221194379999953012679-----998---64---67--8998--888777
Q 000851 572 RLSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSSEHLS-----NPS---SI---CY--SGSS--RYSSFR 636 (1253)
Q Consensus 572 ~~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~---~~---~~--~~~~--~~~~~~ 636 (1253)
|+++++.||+|++|++|+|+++|+|+||+++++.|++++..|...... ... .. .. .... ......
T Consensus 612 rls~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1321)
T 4f4c_A 612 RLSTIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMD 691 (1321)
T ss_dssp CTTTTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHHCC--------------------------
T ss_pred CHHHHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 38789868989996399651368999999853279999996221222233233443322321112222234222222211
Q ss_pred CCCCC---CC----CCH----HHHH----HH-HHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89898---66----411----1101----24-432014668789960299998973004579999999999988678899
Q 000851 637 DFPSS---RR----YDV----EFES----SK-RRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLF 700 (1253)
Q Consensus 637 ~~~~~---~~----~~~----~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (1253)
+.... .. ... +.+. .. ....+...........+++++++.+++++.++++..++.+.+...|.+
T Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 771 (1321)
T 4f4c_A 692 DIMNRVRSSTIGSITNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTY 771 (1321)
T ss_dssp ------------------------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHH
T ss_pred CHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02211101321245677402577753154038999999997078631099999998778999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99999999975199924677489899999999999999999999999999999999999999999998399764334678
Q 000851 701 ALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDEN 780 (1253)
Q Consensus 701 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~f~~~~~ 780 (1253)
...+..++..+...... .......|..++++++++..++.++..++..+.+.++..++|.++|++++++|++|||..++
T Consensus 772 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~ 850 (1321)
T 4f4c_A 772 SVFFTSFMNVFAGNPAD-FLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQN 850 (1321)
T ss_dssp HHHHHHHHHHTSSCSST-TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGG
T ss_pred HHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
T ss_conf 99999999875179345-56678999999999999999999999999999999999999999988873499333216788
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74689999995499999999888999999999999999999999699999999999999999999999995699999999
Q 000851 781 NTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRA 860 (1253)
Q Consensus 781 ~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~ 860 (1253)
++|++++|+++|++.++..++..+..++..++.+++.++++++++|++++++++++|++++..+...+.......+..+.
T Consensus 851 ~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1321)
T 4f4c_A 851 ASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASE 930 (1321)
T ss_dssp CHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSH
T ss_pred CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 84888850250599999999999999999865377770221378689999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999998811699997082799999999998489999999999998999999999999999999999999981698
Q 000851 861 YSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGS 940 (1253)
Q Consensus 861 ~~~~~~~~~e~l~g~~~Ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~ 940 (1253)
..+....+.|++.|+++||+|++++.+.+++.+..+...+...+......+..++...+..+..++++|+|..++..+..
T Consensus 931 ~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~ 1010 (1321)
T 4f4c_A 931 FADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPP 1010 (1321)
T ss_dssp HHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88898899999962798886141488999999999999999999999999999999999999999999875788753765
Q ss_pred CHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
Q ss_conf 988899--999999999999999998799999999989999997323356899998885455666749999688987999
Q 000851 941 NFGDIM--KSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVR 1018 (1253)
Q Consensus 941 ~~g~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~ 1018 (1253)
+.+.+. .++........++......++.+.....+.+|++++++.+++.+... ...+.++..|.|+|+||+|+||++
T Consensus 1011 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~-~~~~~~~~~g~I~f~nVsf~Y~~~ 1089 (1321)
T 4f4c_A 1011 TMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLS-LAGEKKKLYGKVIFKNVRFAYPER 1089 (1321)
T ss_dssp SSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTC-CCSBCCCCCCCEEEEEEEECCTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCEEEEEEEEEECCCC
T ss_conf 4214789999999987788999999999999999999998999860766577766-778788888818999879857999
Q ss_pred CCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECCCCCCCCCCH
Q ss_conf 89654112038774896899984999968899999842378984189999951799997877233288806787652138
Q 000851 1019 PDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTI 1098 (1253)
Q Consensus 1019 ~~~~vL~~isl~I~~Ge~iaIvG~SGSGKSTL~~lL~gl~~p~~G~I~idG~di~~i~~~~lR~~i~~v~Qd~~LF~gTI 1098 (1253)
++.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+|++++++++||++|++|||||+||+|||
T Consensus 1090 ~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTI 1169 (1321)
T 4f4c_A 1090 PEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSI 1169 (1321)
T ss_dssp CSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEH
T ss_pred CCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCH
T ss_conf 98821245169988989999989999819999999956863899789999998654999999854599878997327239
Q ss_pred HHHHCCCC--CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 88850299--8879999999999900989997287876542259999889249999999998605998789726668999
Q 000851 1099 YENIKYGN--EDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALD 1176 (1253)
Q Consensus 1099 reNL~~g~--~~~s~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILILDEpTSaLD 1176 (1253)
||||.+|. ++++|+++++|++.++++++|++||+||||.|||+|.+||||||||||||||++|+|+|||||||||+||
T Consensus 1170 reNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD 1249 (1321)
T 4f4c_A 1170 AENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALD 1249 (1321)
T ss_dssp HHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTT
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 99974549999999999999999829849997176789998238891569999999999999971799899968111578
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHCCC
Q ss_conf 698999999999872896499981591155504889999597898825956895001623899999962129
Q 000851 1177 TASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQDKN 1248 (1253)
Q Consensus 1177 ~~te~~I~~~l~~~~~~~TvI~IsHrl~~i~~aD~I~vl~~G~ive~G~~~eLl~~~~g~y~~l~~~~~~~~ 1248 (1253)
++||+.|+++|++.+++||+|+||||++|+++||+|+|||+|+|+|+|+|+||++ .+|.|++||+.|..+.
T Consensus 1250 ~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~-~~g~y~~L~~~Q~~e~ 1320 (1321)
T 4f4c_A 1250 TESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMS-EKGAYYKLTQKQMTEK 1320 (1321)
T ss_dssp SHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHH-CC--------------
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHH-CCCHHHHHHHHHHHCC
T ss_conf 9999999999999739998999606899999699999998989999888899984-9809999999998505
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1556.68 Aligned_cols=1218 Identities=39% Similarity=0.664 Sum_probs=1051.9
Q ss_pred CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------CCC---------CHHHHH
Q ss_conf 78776317999999621456889999999999999667899999999998832378------996---------101435
Q 000851 29 PSKKQSGSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLS------SHP---------HRLTSR 93 (1253)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~------~~~---------~~~~~~ 93 (1253)
++++....++++++|..+.++.+++++++++++.++..|++++++|.++|.+.... .+. ..+...
T Consensus 27 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (1284)
T 3g5u_A 27 KEKKPAVSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEE 106 (1284)
T ss_dssp ------CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 56666656999998726579999999999999999999999999999999986134443322222211111002446889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999999999999999999999980992235026881189999997899999999898
Q 000851 94 ISEHALYLVYLGLVALVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDK 173 (1253)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~g~l~~~~~~D~~~i~~~~~~~ 173 (1253)
+...++++++++++..++.+++.+++.+.++++..++|.++|++++++|+.|||+ .++|++++|+++|++.+++.+...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~-~~~G~l~sr~~~D~~~i~~~~~~~ 185 (1284)
T 3g5u_A 107 MTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV-HDVGELNTRLTDDVSKINEGIGDK 185 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHS-CCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999998699899756-887789999998899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999899999999999998978899999999999999999999999899999999999999999999936999999810
Q 000851 174 TGHALRYLSQFFVGFAVGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVG 253 (1253)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~ 253 (1253)
++.++..++.++++++++++++|.+++++++.+|++.++..++.+..++..++.++..++.++.+.|.++|+++||+|++
T Consensus 186 ~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~ 265 (1284)
T 3g5u_A 186 IGMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGG 265 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
T ss_conf 99999999999999999999989999999999999999999999999999999999999999999999978799998465
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999989999999999999999999999999999999998098896789999999999999999999
Q 000851 254 EAKAIESYSHSLKEALKQGKKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAA 333 (1253)
Q Consensus 254 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 333 (1253)
|+.+.++|.+..++..+...+.....+...++..++.++.+++++|+|++++..|.+++|.+++++++......++.++.
T Consensus 266 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~ 345 (1284)
T 3g5u_A 266 QKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQAS 345 (1284)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 39999999999999999999999999999999999999999999999999999299889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC-CCCCCCCEEEEECCCEEEEECC
Q ss_conf 999999999999999999972247898999998987899877589987899889999-9641120288838999999858
Q 000851 334 PNLAAIAKGKAAAANIISIIKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRP-HMVFENLNFSVDAGKTFAFVGP 412 (1253)
Q Consensus 334 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~-~~~l~~i~l~i~~g~~~~ivG~ 412 (1253)
+.+..++++..+++|++++++.+++.++. .+.+..+++..+.|+++||+|+|++++ .++|+|+||++++||+++||||
T Consensus 346 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~~-~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~ 424 (1284)
T 3g5u_A 346 PNIEAFANARGAAYEVFKIIDNKPSIDSF-SKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGN 424 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCCCCSSC-CSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECC
T ss_conf 99999999999999999997289867766-65677777777718999989976999987101254589759988999899
Q ss_pred CCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHC
Q ss_conf 99938999999971588997589999961799888887400378804676681238999733999999999999999817
Q 000851 413 SGSGKSTIISMVQRLYEPTSGKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAAN 492 (1253)
Q Consensus 413 sGsGKSTl~~ll~g~~~~~~G~i~i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~ 492 (1253)
||||||||+++|+|+|+|++|+|.+||.|+++++.+++|++++||+|+|++|++||+|||.+|.++.++++++++++.++
T Consensus 425 sGsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~ 504 (1284)
T 3g5u_A 425 SGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEAN 504 (1284)
T ss_dssp SSSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHC
T ss_conf 99979999999807889997389999998775799999865489868875377669999745798999999999999829
Q ss_pred CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 18888619987544125899878968999999999842499888983768888999899999999987089739998149
Q 000851 493 AHSFVEGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHR 572 (1253)
Q Consensus 493 ~~~~i~~l~~g~~t~i~~~g~~LSgGqkqrialARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~ 572 (1253)
++++++.+|+|++|.+|++|.+||||||||++||||++++|+|+|||||||+||+++++.+++.++...+++|+|+||||
T Consensus 505 ~~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~ 584 (1284)
T 3g5u_A 505 AYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHR 584 (1284)
T ss_dssp CHHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSC
T ss_pred CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 69999746563345014787865999999999999995299989997987777999999999999997399989999407
Q ss_pred CHHHHHCCEEEEEECCEEEEEECCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCC-CCCC----CCCCCC-------CCCC
Q ss_conf 235440498999969789884072022211943799999530126799986467-8998----888777-------8989
Q 000851 573 LSTVRDVDTIMVLKNGQVVESGTHVDLISKGGEYAALVNLQSSEHLSNPSSICY-SGSS----RYSSFR-------DFPS 640 (1253)
Q Consensus 573 ~~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~-------~~~~ 640 (1253)
++++..||+|++|++|+++++|+|+++++.++.|..++..+............. .... ...... ....
T Consensus 585 l~~i~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1284)
T 3g5u_A 585 LSTVRNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRST 664 (1284)
T ss_dssp HHHHTTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC--------------------------------------
T ss_pred HHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78997499899998999999788999986787799999974300221113333332222234433333333200034543
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-HHH
Q ss_conf 8664111101244320146687899602999989730045799999999999886788999999999997519992-467
Q 000851 641 SRRYDVEFESSKRRELQSSDQSFAPSPSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHD-SQI 719 (1253)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~ 719 (1253)
................++......+...+++++++.++.+++++++.+++.+.+...+.+++.+..++..+..... ...
T Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 744 (1284)
T 3g5u_A 665 RKSICGPHDQDRKLSTKEALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQ 744 (1284)
T ss_dssp -------------------CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 33445642233211024555313662589999998451579999999999999999999999999999998556850336
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 74898999999999999999999999999999999999999999999983997643346787468999999549999999
Q 000851 720 KRVVDQVALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSA 799 (1253)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~ 799 (1253)
......+..+++++++...+..+++.+...+.+.++..++|.++|++++++|++||+.+.+++|++++|+++|++.++..
T Consensus 745 ~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~ 824 (1284)
T 3g5u_A 745 RQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGA 824 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 77999999999999999999999999999999999999999999999983998887578998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 98889999999999999999999996999999999999999999999999956999999999999999999881169999
Q 000851 800 LADRLSIIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVA 879 (1253)
Q Consensus 800 ~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ir 879 (1253)
+...+..++.++..++..+++++.++|.+++++++.+|++++..+...+..+....+..+........+.|++.|+++||
T Consensus 825 ~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~ 904 (1284)
T 3g5u_A 825 TGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVV 904 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999996999999999999999999999999999999999999999999999998899999
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 70827999999999984899999999999989999999999999999999999999816989888999999999999999
Q 000851 880 AYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAV 959 (1253)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~ 959 (1253)
+|+.++.+.++|.+..+...+...+.....+...++...+.++..++++|+|.+++..+.++++.++.++.+......++
T Consensus 905 a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1284)
T 3g5u_A 905 SLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAV 984 (1284)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 84659999999999999999999999999999999999999999999999999999909806999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEE
Q ss_conf 99998799999999989999997323356899998885455666749999688987999896541120387748968999
Q 000851 960 AETLALAPDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAV 1039 (1253)
Q Consensus 960 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~iaI 1039 (1253)
..+....+.+.++..+..|+.++++.+++..........+++..+.|+|+||+|+|+++++.++|+|+||+|++||++||
T Consensus 985 ~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~i 1064 (1284)
T 3g5u_A 985 GQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLAL 1064 (1284)
T ss_dssp HHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEE
T ss_conf 99999999999999999999999838876666555665456777857999989977999987002030599769988999
Q ss_pred ECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCC--CCCHHHHHHH
Q ss_conf 84999968899999842378984189999951799997877233288806787652138888502998--8799999999
Q 000851 1040 VGQSGSGKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNE--DASEIELMKA 1117 (1253)
Q Consensus 1040 vG~SGSGKSTL~~lL~gl~~p~~G~I~idG~di~~i~~~~lR~~i~~v~Qd~~LF~gTIreNL~~g~~--~~s~~ei~~a 1117 (1253)
|||||||||||+++|+|+|+|++|+|.+||.|+++++++.+|++++||||||.+|++||+|||.++.+ ..++++++++
T Consensus 1065 vG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~ 1144 (1284)
T 3g5u_A 1065 VGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRA 1144 (1284)
T ss_dssp ECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 88999978999999946867899779899998000789999702689877874066669999746687789999999999
Q ss_pred HHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 99900989997287876542259999889249999999998605998789726668999698999999999872896499
Q 000851 1118 TKAANAHGFISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTI 1197 (1253)
Q Consensus 1118 l~~a~l~~~I~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILILDEpTSaLD~~te~~I~~~l~~~~~~~TvI 1197 (1253)
++.++++++++++|+||||.+||+|.+||||||||+|||||++++|+|||||||||+||+.+++.|++.+++..+|+|+|
T Consensus 1145 ~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi 1224 (1284)
T 3g5u_A 1145 AKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCI 1224 (1284)
T ss_dssp HHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEE
T ss_pred HHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99839599997270424561178889338999999999999974999999868755579999999999999867999899
Q ss_pred EECCCCHHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 9815911555048899995978988259568950016238999999621297
Q 000851 1198 MVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQDKNP 1249 (1253)
Q Consensus 1198 ~IsHrl~~i~~aD~I~vl~~G~ive~G~~~eLl~~~~g~y~~l~~~~~~~~~ 1249 (1253)
+||||++++..||+|+||++|+++|.|+|+||++ .+|.|++|++.|.....
T Consensus 1225 ~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~-~~g~y~~l~~~q~~~~~ 1275 (1284)
T 3g5u_A 1225 VIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLA-QKGIYFSMVSVQAGAKR 1275 (1284)
T ss_dssp EECSCTTGGGSCSEEEEEETBEEEEEECHHHHHH-SCSHHHHHHHHHC----
T ss_pred EEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH-CCCHHHHHHHHHHHCCC
T ss_conf 9955879998099899998998999778999984-77779999999761322
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=852.19 Aligned_cols=578 Identities=36% Similarity=0.594 Sum_probs=524.1
Q ss_pred CCCHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------------------CCHHHHHHHHH
Q ss_conf 96029999897300-457999999999998867889999999999975199------------------92467748989
Q 000851 665 PSPSIWELLKLNAA-EWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSP------------------HDSQIKRVVDQ 725 (1253)
Q Consensus 665 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------------------~~~~~~~~~~~ 725 (1253)
+..++++++++..+ .+..++++.+++++.|+..|++.+.++++++.+... ...........
T Consensus 58 ~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1321)
T 4f4c_A 58 NKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMN 137 (1321)
T ss_dssp SCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHH
T ss_pred CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 87799997315676789999999999999999999999999999999970100014543000344310016899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999983997643346787468999999549999999988899
Q 000851 726 VALIFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLS 805 (1253)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~l~ 805 (1253)
+.+.++++++...++.+++.+++.+.+++...++|.++|+|++++|++|||. +++|++++|+++|++.+++.+...+.
T Consensus 138 ~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~--~~~G~l~sr~~~D~~~i~~~~~~~l~ 215 (1321)
T 4f4c_A 138 VVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDT--NHSGTLATKLFDNLERVKEGTGDKIG 215 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH--TCCTTHHHHHHHHHHHHHHTSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999997889899879--98489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHH
Q ss_conf 99999999999999999996999999999999999999999999956999999999999999999881169999708279
Q 000851 806 IIVQNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEK 885 (1253)
Q Consensus 806 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ir~~~~~~ 885 (1253)
.++..++.++++++++++++|.+++++++.+|+++++.....+..++...+.++...+..+.+.|.++|+++||+|++|+
T Consensus 216 ~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 295 (1321)
T 4f4c_A 216 MAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLR 295 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999998399999821429
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999984899999999999989999999999999999999999999816989888999999999999999999987
Q 000851 886 RISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLAL 965 (1253)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 965 (1253)
.+.++|.+..++..+...+.....+...+...++..+..++++|+|.+++..+.++.|.+++++.+......|+..+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~ 375 (1321)
T 4f4c_A 296 YELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQ 375 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999959986999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCC
Q ss_conf 99999999989999997323356899998885455666749999688987999896541120387748968999849999
Q 000851 966 APDIVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGS 1045 (1253)
Q Consensus 966 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGS 1045 (1253)
...+..+..+.+|++++++.+++.+...+......+..+.|+|+||+|+||++++.++|+|+||+|++||++||||||||
T Consensus 376 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGs 455 (1321)
T 4f4c_A 376 LAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGC 455 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCC
T ss_conf 99999999999999999717853456665565677888767999855407999987433331886228827899805898
Q ss_pred CHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHH
Q ss_conf 68899999842378984189999951799997877233288806787652138888502998879999999999900989
Q 000851 1046 GKSTVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHG 1125 (1253)
Q Consensus 1046 GKSTL~~lL~gl~~p~~G~I~idG~di~~i~~~~lR~~i~~v~Qd~~LF~gTIreNL~~g~~~~s~~ei~~al~~a~l~~ 1125 (1253)
|||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||+|.||+|||||||.+|+++++++++++||+.+++++
T Consensus 456 GKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~ 535 (1321)
T 4f4c_A 456 GKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEK 535 (1321)
T ss_dssp CHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHH
T ss_conf 57788887545651644861579965011259998504666587533207861678864155220999999998756546
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHH
Q ss_conf 99728787654225999988924999999999860599878972666899969899999999987289649998159115
Q 000851 1126 FISRMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLST 1205 (1253)
Q Consensus 1126 ~I~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILILDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IsHrl~~ 1205 (1253)
+|++||+||||.|||+|.+||||||||||||||++++|+|+|||||||+||++||+.++++|+++.+++|+|+||||+++
T Consensus 536 ~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls~ 615 (1321)
T 4f4c_A 536 FIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLST 615 (1321)
T ss_dssp HHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTTT
T ss_pred HHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf 88708888860755898877777879999999872599989984554468878999999999998479889997363878
Q ss_pred HHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 5504889999597898825956895001623899999962
Q 000851 1206 IRNADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQ 1245 (1253)
Q Consensus 1206 i~~aD~I~vl~~G~ive~G~~~eLl~~~~g~y~~l~~~~~ 1245 (1253)
+++||+|+||++|+|+|+|+|+||++ .+|.|+++++.|.
T Consensus 616 i~~aD~Iivl~~G~ive~Gth~eL~~-~~g~y~~l~~~q~ 654 (1321)
T 4f4c_A 616 IRNADLIISCKNGQVVEVGDHRALMA-QQGLYYDLVTAQT 654 (1321)
T ss_dssp TTTCSEEEEEETTEEEEEECHHHHHT-TTCHHHHHHHHHH
T ss_pred HHHCCEEEEEECCEEECCCCHHHHHH-HHHHHHHHHHHHH
T ss_conf 98689899963996513689999998-5327999999622
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=780.93 Aligned_cols=577 Identities=39% Similarity=0.642 Sum_probs=513.7
Q ss_pred CHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------C--------HHHHHHHHHHHH
Q ss_conf 02999989730-04579999999999988678899999999999751999---------2--------467748989999
Q 000851 667 PSIWELLKLNA-AEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPH---------D--------SQIKRVVDQVAL 728 (1253)
Q Consensus 667 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~--------~~~~~~~~~~~~ 728 (1253)
..+++++++.. ..+..++++.+++++.++..|++++.++.+++.+.... . .........+..
T Consensus 33 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1284)
T 3g5u_A 33 VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAY 112 (1284)
T ss_dssp CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 56999998726579999999999999999999999999999999986134443322222211111002446889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999983997643346787468999999549999999988899999
Q 000851 729 IFVGLAVVTIPVYLLQHYFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIV 808 (1253)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~ 808 (1253)
.+++++++..++.+++.++..+.+.+...++|.++|++++++|++||+. +++|++++|+++|++.++..+...+..++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~--~~~G~l~sr~~~D~~~i~~~~~~~~~~~~ 190 (1284)
T 3g5u_A 113 YYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV--HDVGELNTRLTDDVSKINEGIGDKIGMFF 190 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHS--CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999998699899756--88778999999889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHH
Q ss_conf 99999999999999996999999999999999999999999956999999999999999999881169999708279999
Q 000851 809 QNVALTVTAFVIAFILSWRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRIS 888 (1253)
Q Consensus 809 ~~~~~~i~~~~~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ir~~~~~~~~~ 888 (1253)
..++.++..++++++++|++++++++.+|++.++.....+..++...+.++..++.++.+.|+++|+++||+||+|+.+.
T Consensus 191 ~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~ 270 (1284)
T 3g5u_A 191 QAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKEL 270 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHH
T ss_conf 99999999999999998999999999999999999999999999999999999999999999997879999846539999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999984899999999999989999999999999999999999999816989888999999999999999999987999
Q 000851 889 IQFASELSQPNKQALLRGHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPD 968 (1253)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 968 (1253)
++|.+..++..+...+.....+...++..++..+..++++|+|.+++..+.++.|.+++++.+......++..+...+..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1284)
T 3g5u_A 271 ERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEA 350 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999929988999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHH
Q ss_conf 99999989999997323356899998885455666749999688987999896541120387748968999849999688
Q 000851 969 IVKGSQALGPVFGILYRKTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKS 1048 (1253)
Q Consensus 969 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGSGKS 1048 (1253)
+..+..+..|++++++.+++.++..+....+++..+.|+|+||+|+|+++++.++|+|+||+|++||++|||||||||||
T Consensus 351 ~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKS 430 (1284)
T 3g5u_A 351 FANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKS 430 (1284)
T ss_dssp HHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHH
T ss_conf 99999999999999728986776665677777777718999989976999987101254589759988999899999799
Q ss_pred HHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHH
Q ss_conf 99999842378984189999951799997877233288806787652138888502998879999999999900989997
Q 000851 1049 TVISLVMRFYDPISGTVLIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFIS 1128 (1253)
Q Consensus 1049 TL~~lL~gl~~p~~G~I~idG~di~~i~~~~lR~~i~~v~Qd~~LF~gTIreNL~~g~~~~s~~ei~~al~~a~l~~~I~ 1128 (1253)
||+++|+|+|+|++|+|.+||.|+++++++++|++++||||+|.+|++||+|||.+|.++.++++++++++.++++++++
T Consensus 431 Tl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~ 510 (1284)
T 3g5u_A 431 TTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIM 510 (1284)
T ss_dssp HHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH
T ss_conf 99999807889997389999998775799999865489868875377669999745798999999999999829699997
Q ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHC
Q ss_conf 28787654225999988924999999999860599878972666899969899999999987289649998159115550
Q 000851 1129 RMPEGYQSHVGDRGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRN 1208 (1253)
Q Consensus 1129 ~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILILDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IsHrl~~i~~ 1208 (1253)
++|+|+||.+|++|.+||||||||+|||||++++|+|||||||||+||+++|+.+++.+++..+++|+|+||||++++..
T Consensus 511 ~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~~ 590 (1284)
T 3g5u_A 511 KLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRN 590 (1284)
T ss_dssp HSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHTT
T ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHC
T ss_conf 46563345014787865999999999999995299989997987777999999999999997399989999407789974
Q ss_pred CCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHC
Q ss_conf 48899995978988259568950016238999999621
Q 000851 1209 ADKIAVLQQGKVAEIGSHEQLLRKENGIYKQLIRLQQD 1246 (1253)
Q Consensus 1209 aD~I~vl~~G~ive~G~~~eLl~~~~g~y~~l~~~~~~ 1246 (1253)
||+|+||++|+++|.|+|+||++ .++.|++++..|..
T Consensus 591 ~d~i~vl~~G~i~~~g~~~~l~~-~~~~~~~~~~~~~~ 627 (1284)
T 3g5u_A 591 ADVIAGFDGGVIVEQGNHDELMR-EKGIYFKLVMTQTA 627 (1284)
T ss_dssp CSEEEECSSSCCCCEECHHHHHH-TTSHHHHHHHHTC-
T ss_pred CCEEEEEECCEEEEECCHHHHHH-CCCHHHHHHHHHHH
T ss_conf 99899998999999788999986-78779999997430
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=736.37 Aligned_cols=571 Identities=27% Similarity=0.419 Sum_probs=449.3
Q ss_pred CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 31799999962145688999999999999966789999999999883237899610143589999999999999999999
Q 000851 34 SGSFLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAW 113 (1253)
Q Consensus 34 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (1253)
...++++++|.++++ ..+++++++.++.+++.+..|+++++++|.+.... + ...+......++.+.++..++.+
T Consensus 22 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~ 95 (598)
T 3qf4_B 22 TATLRRLLGYLRPHT-FTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPR-R----FDLLPRYMLILGTIYALTSLLFW 95 (598)
T ss_dssp HHHHHHHGGGTGGGH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT-C----GGGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-C----HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999-99999999999999999999999999999997368-8----89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998099223502688118999999789999999989899999899999999999998
Q 000851 114 IGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFT 193 (1253)
Q Consensus 114 ~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~g~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1253)
++.+++.+.+.++..++|.++|++++++|+.||++ .++|++++|+++|++.+++.+...+..++..++.+++++++++.
T Consensus 96 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~-~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~ 174 (598)
T 3qf4_B 96 LQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDR-TPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFR 174 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCTHHHHH-SCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997799999768-88899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97889999999999999999999999989999999999999999999993699999981099999999999999999989
Q 000851 194 SVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGK 273 (1253)
Q Consensus 194 ~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 273 (1253)
++|.++++.++.+|+..++...+.+..++..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+..++..+...
T Consensus 175 ~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 254 (598)
T 3qf4_B 175 VNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGT 254 (598)
T ss_dssp HCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98999999999999999999999999999999999999999999999973799999748709999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999809889678999999999999999999999999999999999999997
Q 000851 274 KSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISII 353 (1253)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l 353 (1253)
+.....+...++..++..+..++++++|++++..|.+++|.+++++.+......++..+...+..++++..+++|+.+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l 334 (598)
T 3qf4_B 255 KAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEIL 334 (598)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999859978999999999999999999999999999999999999999997
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 22478989999989878998775899878998899999641120288838999999858999389999999715889975
Q 000851 354 KENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSG 433 (1253)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~g~~~~~~G 433 (1253)
+.+++.++ +.....++..+.|+++||+|+|+++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|
T Consensus 335 ~~~~~~~~---~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G 410 (598)
T 3qf4_B 335 DLEEEKDD---PDAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRG 410 (598)
T ss_dssp TSCCCCCC---SSCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEE
T ss_pred CCCCCCCC---CCCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCE
T ss_conf 68877777---7777777777718999989977999-8601222799869988999899999699999999458579980
Q ss_pred EEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf 89999961799888887400378804676681238999733999999999999999817188886199875441258998
Q 000851 434 KILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGT 513 (1253)
Q Consensus 434 ~i~i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~ 513 (1253)
+|.+||.|+.+.+.+++|++++||+|+|++|++|++||+.++.++.++++++++++.++++++++.+|+|++|.+|++|.
T Consensus 411 ~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~ 490 (598)
T 3qf4_B 411 QILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGE 490 (598)
T ss_dssp EEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHT
T ss_pred EEEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCC
T ss_conf 89999998301889999841089907982324639999744799999999999999969788897464532364227889
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEE
Q ss_conf 78968999999999842499888983768888999899999999987089739998149235440498999969789884
Q 000851 514 QLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVES 593 (1253)
Q Consensus 514 ~LSgGqkqrialARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~ 593 (1253)
+||||||||++||||++++|+++|||||||+||++++..+.+.++++.+++|+|+||||++.+..||+|++|++|++++.
T Consensus 491 ~LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~ 570 (598)
T 3qf4_B 491 DLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEM 570 (598)
T ss_dssp TSCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEEC
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 87999999999999996499999998976679999999999999998089989999427789971998999989999987
Q ss_pred ECCCHHHHCCCHHHHHHHHHHC
Q ss_conf 0720222119437999995301
Q 000851 594 GTHVDLISKGGEYAALVNLQSS 615 (1253)
Q Consensus 594 g~~~~l~~~~~~~~~~~~~~~~ 615 (1253)
|+|+|+++.++.|++++..+..
T Consensus 571 g~~~~l~~~~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 571 GKHDELIQKRGFYYELFTSQYG 592 (598)
T ss_dssp SCHHHHHHTTCHHHHHHHHHHG
T ss_pred CCHHHHHHCCCHHHHHHHHHHH
T ss_conf 7899998678779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=735.03 Aligned_cols=570 Identities=26% Similarity=0.375 Sum_probs=476.1
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999962145688999999999999966789999999999883237899610143589999999999999999999999
Q 000851 37 FLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRISEHALYLVYLGLVALVSAWIGV 116 (1253)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 116 (1253)
++++++|.+++++ .+++++++.++.+++.+..|+++++++|...... + ...+....+.++.+.++..++.++..
T Consensus 11 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (587)
T 3qf4_A 11 SKTLARYLKPYWI-FAVLAPLFMVVEVICDLSQPTLLARIVDEGIARG----D-FSLVLKTGILMLIVALIGAVGGIGCT 84 (587)
T ss_dssp CCCGGGGTGGGHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT----C-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----C-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999-9999999999999999999999999999987369----8-79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998099223502688118999999789999999989899999899999999999998978
Q 000851 117 AFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGFTSVW 196 (1253)
Q Consensus 117 ~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~g~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1253)
++..+.++++..++|.++|+|++++|+.||++ .++|++++|+++|++.+++.+...++.++..++.+++++++++.++|
T Consensus 85 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~-~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 163 (587)
T 3qf4_A 85 VFASYASQNFGADLRRDLFRKVLSFSISNVNR-FHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINV 163 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997889799765-88899999999999999999999999999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999989999999999999999999993699999981099999999999999999989999
Q 000851 197 QLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQGKKSG 276 (1253)
Q Consensus 197 ~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 276 (1253)
.++++.++.+|++.++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+..++..+...+..
T Consensus 164 ~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 243 (587)
T 3qf4_A 164 KLSSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAF 243 (587)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999985599999862149999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999999999809889678999999999999999999999999999999999999997224
Q 000851 277 VAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISIIKEN 356 (1253)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 356 (1253)
...+...++..++..+..++++|+|++++.+|.+++|.+++++.+......++..+...+..++++..+++|+.++++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~ 323 (587)
T 3qf4_A 244 SLIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEK 323 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999849938999999999999999999999999999999999999999997689
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 78989999989878998775899878998899999641120288838999999858999389999999715889975899
Q 000851 357 SHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTSGKIL 436 (1253)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~g~~~~~~G~i~ 436 (1253)
++..+. ......++..+.|+++|++|+|+++..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.
T Consensus 324 ~~~~~~--~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~ 401 (587)
T 3qf4_A 324 PAIEEA--DNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVE 401 (587)
T ss_dssp CSCCCC--TTCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEE
T ss_pred CCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 765788--776566888880799788998489997642111799869988999899999799999999278669986798
Q ss_pred ECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 99961799888887400378804676681238999733999999999999999817188886199875441258998789
Q 000851 437 LDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGGTQLS 516 (1253)
Q Consensus 437 i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LS 516 (1253)
+||+|+++++..++|++++||+|+|++|++|++||+.++.++.+++++.++++.++++++++.+|+|++|.++++|.+||
T Consensus 402 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LS 481 (587)
T 3qf4_A 402 VDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFS 481 (587)
T ss_dssp ESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSC
T ss_pred ECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCC
T ss_conf 99998340789999841389778986767559999852488999999999999968499997565312127518989929
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEEECC
Q ss_conf 68999999999842499888983768888999899999999987089739998149235440498999969789884072
Q 000851 517 GGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVESGTH 596 (1253)
Q Consensus 517 gGqkqrialARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~~g~~ 596 (1253)
||||||++||||++++|+++|||||||+||++++..+++.++++.+++|+|+||||++++..||+|++|++|++++.|+|
T Consensus 482 gGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 561 (587)
T 3qf4_A 482 GGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTH 561 (587)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCH
T ss_conf 99999999999997299999997975447999999999999986799989998227688981998999989989997889
Q ss_pred CHHHHCCCHHHHHHHHHHC
Q ss_conf 0222119437999995301
Q 000851 597 VDLISKGGEYAALVNLQSS 615 (1253)
Q Consensus 597 ~~l~~~~~~~~~~~~~~~~ 615 (1253)
+|+++.++.|.+++..+..
T Consensus 562 ~el~~~~~~~~~~~~~~~~ 580 (587)
T 3qf4_A 562 KELLEHCKPYREIYESQFG 580 (587)
T ss_dssp HHHHHHCHHHHHHHHHHC-
T ss_pred HHHHHCCCHHHHHHHHHHC
T ss_conf 9998678399999999846
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=730.31 Aligned_cols=571 Identities=28% Similarity=0.406 Sum_probs=501.5
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH----HHHHHHHHHHHHHHHHHH
Q ss_conf 9999996214568899999999999996678999999999988323789961014358----999999999999999999
Q 000851 37 FLSLFAAADKIDCVLMFLGSLGAFIHGATLPVFFILFGRMIDSLGHLSSHPHRLTSRI----SEHALYLVYLGLVALVSA 112 (1253)
Q Consensus 37 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~~ 112 (1253)
++++++|.+++++ .+++++++.++.+++.+..|++++.++|.+.... +... ...+ ...+..++.+.++..++.
T Consensus 2 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (578)
T 4a82_A 2 IKRYLQFVKPYKY-RIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNH-ALTT-DEKVHHLTIAIGIALFIFVIVRPPIE 78 (578)
T ss_dssp HHHHHHHHGGGHH-HHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCS-SCCH-HHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7999999889999-9999999999999999999999999999998168-7114-67788889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999809922350268811899999978999999998989999989999999999999
Q 000851 113 WIGVAFWMQTGERQTARLRLKYLQSVLKKDMSFFDTEARDSNIIFHISSDAILVQDAIGDKTGHALRYLSQFFVGFAVGF 192 (1253)
Q Consensus 113 ~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~g~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1253)
++..++..+.+.++..++|.++|+|++++|+.||++ .++|++++|+++|++.+++.+...+..++..++.+++++++++
T Consensus 79 ~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~-~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~ 157 (578)
T 4a82_A 79 FIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYAN-NQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMF 157 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHT-SCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999998789999768-9869999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89788999999999999999999999998999999999999999999999369999998109999999999999999998
Q 000851 193 TSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYGEAGKVAEEIISQVRAVYAFVGEAKAIESYSHSLKEALKQG 272 (1253)
Q Consensus 193 ~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~ 272 (1253)
.++|.++++.++.+|++.++...+.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+..++..+..
T Consensus 158 ~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~ 237 (578)
T 4a82_A 158 FLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRA 237 (578)
T ss_dssp HHCTTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99699999999999999999999999999999999999999999999998249999981664999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999980988967899999999999999999999999999999999999999
Q 000851 273 KKSGVAKGIGVGLTYGLLFCAWALLLWYAGILVRHGDTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKAAAANIISI 352 (1253)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~ 352 (1253)
.+.....+...++..++..+..++++++|++++..|.+++|.+++++.+......++..+...+..++++..+++|+.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~ 317 (578)
T 4a82_A 238 LKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQL 317 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999985995899999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 72247898999998987899877589987899889999964112028883899999985899938999999971588997
Q 000851 353 IKENSHSSERPGDDGITLPKLAGQIEFSEVCFAYPSRPHMVFENLNFSVDAGKTFAFVGPSGSGKSTIISMVQRLYEPTS 432 (1253)
Q Consensus 353 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~ll~g~~~~~~ 432 (1253)
++.+++..+. ......++..+.|+++|++|+|++...++|+|+||++++||+++|+||||||||||+++|+|+++|++
T Consensus 318 l~~~~~~~~~--~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~ 395 (578)
T 4a82_A 318 IDEDYDIKNG--VGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395 (578)
T ss_dssp HTCCCSSCCC--TTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSE
T ss_pred HCCCCCCCCC--CCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
T ss_conf 7689766678--77666677788079999999758999741343379987999999989999859999999846788999
Q ss_pred CEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 58999996179988888740037880467668123899973399999999999999981718888619987544125899
Q 000851 433 GKILLDGHDLKSLQLKWLREQMGLVSQEPALFATSIANNILLGKEDASMDRVIEAAKAANAHSFVEGLPDGYQTQVGEGG 512 (1253)
Q Consensus 433 G~i~i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g 512 (1253)
|+|.+||.|+++.+..++|++++||+|+|++|++|++||+.+|.++.+++++.++++.++++++++.+|+|++|.+|++|
T Consensus 396 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g 475 (578)
T 4a82_A 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERG 475 (578)
T ss_dssp EEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGG
T ss_pred CEEEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCC
T ss_conf 67999999844278999960068992898347645999985279998899999999880959999757330102530688
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEE
Q ss_conf 87896899999999984249988898376888899989999999998708973999814923544049899996978988
Q 000851 513 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQRALEKIMSNRTTIVVAHRLSTVRDVDTIMVLKNGQVVE 592 (1253)
Q Consensus 513 ~~LSgGqkqrialARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~vl~~G~i~~ 592 (1253)
.+||||||||++||||++++|++++||||||+||++++..+.+.++++.+++|+|+||||++.+..||+|++|++|++++
T Consensus 476 ~~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 555 (578)
T 4a82_A 476 VKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555 (578)
T ss_dssp TTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEE
T ss_conf 96799999999999999749999999786545799999999999999808997999831789997199899998998999
Q ss_pred EECCCHHHHCCCHHHHHHHHH
Q ss_conf 407202221194379999953
Q 000851 593 SGTHVDLISKGGEYAALVNLQ 613 (1253)
Q Consensus 593 ~g~~~~l~~~~~~~~~~~~~~ 613 (1253)
.|+|+|+++.++.|.+++..|
T Consensus 556 ~g~~~el~~~~~~~~~~~~~q 576 (578)
T 4a82_A 556 TGTHRELIAKQGAYEHLYSIQ 576 (578)
T ss_dssp EECHHHHHHTTSHHHHHHTTT
T ss_pred ECCHHHHHHCCCHHHHHHHHH
T ss_conf 888999985883899999850
No 8
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=729.67 Aligned_cols=572 Identities=28% Similarity=0.423 Sum_probs=513.3
Q ss_pred CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02999989730045799999999999886788999999999997519992467748989999999999999999999999
Q 000851 667 PSIWELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHY 746 (1253)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1253)
..+.+++++.+++++.++++.++..+.++..+..++.++.+++........ .....+..+++++.++..++.++..+
T Consensus 23 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (598)
T 3qf4_B 23 ATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRF---DLLPRYMLILGTIYALTSLLFWLQGK 99 (598)
T ss_dssp HHHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCG---GGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999999736888---99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999983997643346787468999999549999999988899999999999999999999969
Q 000851 747 FYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSW 826 (1253)
Q Consensus 747 ~~~~~~~~~~~~lr~~~~~~il~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~ 826 (1253)
...+.+.++..++|.++|++++++|+.||+. +++|++++|+++|++.++..+...+..++.+++.++..+++++.++|
T Consensus 100 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 177 (598)
T 3qf4_B 100 IMLTLSQDVVFRLRKELFEKLQRVPVGFFDR--TPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNV 177 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTHHHHH--SCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999997799999768--88899999999999999999999999999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999956999999999999999999881169999708279999999999848999999999
Q 000851 827 RLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRG 906 (1253)
Q Consensus 827 ~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ir~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (1253)
++++++++.+|+.+++.....+..++...+.++...+..+.+.|.++|+++||+||+++.+.++|.+..++..+...+..
T Consensus 178 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 257 (598)
T 3qf4_B 178 ILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQ 257 (598)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999973799999748709999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99989999999999999999999999999816989888999999999999999999987999999999899999973233
Q 000851 907 HISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRK 986 (1253)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 986 (1253)
...++...+..++..+..++++|+|++++..+.+++|.+++++.+......++..+...+..+..+..+.+|+.++++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~ 337 (598)
T 3qf4_B 258 IFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLE 337 (598)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999859978999999999999999999999999999999999999999997688
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 56899998885455666749999688987999896541120387748968999849999688999998423789841899
Q 000851 987 TAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVL 1066 (1253)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGSGKSTL~~lL~gl~~p~~G~I~ 1066 (1253)
++.+. +...+.++..+.|+++||+|+|++ +.++|+|+||+|++||++||+||||||||||+++|+|+|+|++|+|.
T Consensus 338 ~~~~~--~~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~ 413 (598)
T 3qf4_B 338 EEKDD--PDAVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQIL 413 (598)
T ss_dssp CCCCC--SSCCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEE
T ss_pred CCCCC--CCCCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEE
T ss_conf 77777--777777777771899998997799--98601222799869988999899999699999999458579980899
Q ss_pred ECCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99951799997877233288806787652138888502998879999999999900989997287876542259999889
Q 000851 1067 IDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLS 1146 (1253)
Q Consensus 1067 idG~di~~i~~~~lR~~i~~v~Qd~~LF~gTIreNL~~g~~~~s~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1146 (1253)
+||.|+++++.+++|++++||||+|.+|++|++||+.++.++.++++++++++.++++++++.+|+|+||.++++|.+||
T Consensus 414 ~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LS 493 (598)
T 3qf4_B 414 VDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLS 493 (598)
T ss_dssp ETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSC
T ss_pred ECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCC
T ss_conf 99998301889999841089907982324639999744799999999999999969788897464532364227889879
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCEEEEEECCEEEEECCH
Q ss_conf 24999999999860599878972666899969899999999987289649998159115550488999959789882595
Q 000851 1147 GGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSH 1226 (1253)
Q Consensus 1147 GGQrQRlaLARALlr~p~ILILDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IsHrl~~i~~aD~I~vl~~G~ive~G~~ 1226 (1253)
||||||+|||||++++|+|||||||||+||+.+++.+++.+++..+++|+|+||||+++++.||+|++|++|++++.|+|
T Consensus 494 gGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 573 (598)
T 3qf4_B 494 QGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKH 573 (598)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCH
T ss_conf 99999999999996499999998976679999999999999998089989999427789971998999989999987789
Q ss_pred HHHHHCCCCHHHHHHHHHHCCC
Q ss_conf 6895001623899999962129
Q 000851 1227 EQLLRKENGIYKQLIRLQQDKN 1248 (1253)
Q Consensus 1227 ~eLl~~~~g~y~~l~~~~~~~~ 1248 (1253)
+||++ .++.|+++++.|....
T Consensus 574 ~~l~~-~~~~~~~~~~~~~~~~ 594 (598)
T 3qf4_B 574 DELIQ-KRGFYYELFTSQYGLV 594 (598)
T ss_dssp HHHHH-TTCHHHHHHHHHHGGG
T ss_pred HHHHH-CCCHHHHHHHHHHHHH
T ss_conf 99986-7877999999976465
No 9
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=728.75 Aligned_cols=569 Identities=28% Similarity=0.419 Sum_probs=505.6
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99897300457999999999998867889999999999975199924677489899999999999999999999999999
Q 000851 671 ELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVVDQVALIFVGLAVVTIPVYLLQHYFYTL 750 (1253)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1253)
+++++.+++++.+.++.++..+.++..+..++.++.+++....... ......+..+++++.++..++.++..+...+
T Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (587)
T 3qf4_A 13 TLARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGD---FSLVLKTGILMLIVALIGAVGGIGCTVFASY 89 (587)
T ss_dssp CGGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999873698---7999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999839976433467874689999995499999999888999999999999999999999699999
Q 000851 751 MGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILSWRLAA 830 (1253)
Q Consensus 751 ~~~~~~~~lr~~~~~~il~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l 830 (1253)
.+.+...++|.++|++++++|+.||+. +++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.+++
T Consensus 90 ~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 167 (587)
T 3qf4_A 90 ASQNFGADLRRDLFRKVLSFSISNVNR--FHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSS 167 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999997889799765--888999999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999569999999999999999998811699997082799999999998489999999999998
Q 000851 831 VVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISG 910 (1253)
Q Consensus 831 ~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1253)
++++.+|++.+......+..++..++.++..++..+.+.|.++|+++||+|++++.+.++|.+..++..+...+......
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
T 3qf4_A 168 VLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIV 247 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999855999998621499999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999999999998169898889999999999999999999879999999998999999732335689
Q 000851 911 FGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYRKTAIQ 990 (1253)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 990 (1253)
...++..++..+..++++|+|.+++..+.+++|.+++++.+......++..+...+..+.++..+.+|+.++++.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 327 (587)
T 3qf4_A 248 FALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIE 327 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998499389999999999999999999999999999999999999999976897657
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 99988854556667499996889879998965411203877489689998499996889999984237898418999995
Q 000851 991 PDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTVLIDGY 1070 (1253)
Q Consensus 991 ~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGSGKSTL~~lL~gl~~p~~G~I~idG~ 1070 (1253)
+.. .....++..+.|+++||+|+|++. +.++|+|+||+|++||++||+||||||||||+++|+|+|+|++|+|.+||.
T Consensus 328 ~~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~ 405 (587)
T 3qf4_A 328 EAD-NALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDEL 405 (587)
T ss_dssp CCT-TCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSS
T ss_pred CCC-CCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf 887-765668888807997889984899-976421117998699889998999997999999992786699867989999
Q ss_pred CCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 17999978772332888067876521388885029988799999999999009899972878765422599998892499
Q 000851 1071 DIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQLSGGQK 1150 (1253)
Q Consensus 1071 di~~i~~~~lR~~i~~v~Qd~~LF~gTIreNL~~g~~~~s~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSGGQr 1150 (1253)
|+++++.+++|++++||||+|.+|++|++||+.++.++.++++++++++.++++++++++|+|+||.++++|.+||||||
T Consensus 406 ~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqr 485 (587)
T 3qf4_A 406 DVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQK 485 (587)
T ss_dssp BGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHH
T ss_pred ECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHH
T ss_conf 83407899998413897789867675599998524889999999999999684999975653121275189899299999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998605998789726668999698999999999872896499981591155504889999597898825956895
Q 000851 1151 QRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGSHEQLL 1230 (1253)
Q Consensus 1151 QRlaLARALlr~p~ILILDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IsHrl~~i~~aD~I~vl~~G~ive~G~~~eLl 1230 (1253)
||+|||||++++|+|+|||||||+||+.+++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+|+||+
T Consensus 486 Qrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~ 565 (587)
T 3qf4_A 486 QRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELL 565 (587)
T ss_dssp HHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999972999999979754479999999999999867999899982276889819989999899899978899998
Q ss_pred HCCCCHHHHHHHHHHCC
Q ss_conf 00162389999996212
Q 000851 1231 RKENGIYKQLIRLQQDK 1247 (1253)
Q Consensus 1231 ~~~~g~y~~l~~~~~~~ 1247 (1253)
+ .++.|+++++.|...
T Consensus 566 ~-~~~~~~~~~~~~~~~ 581 (587)
T 3qf4_A 566 E-HCKPYREIYESQFGN 581 (587)
T ss_dssp H-HCHHHHHHHHHHC--
T ss_pred H-CCCHHHHHHHHHHCC
T ss_conf 6-783999999998465
No 10
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=725.96 Aligned_cols=571 Identities=29% Similarity=0.439 Sum_probs=506.2
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999897300457999999999998867889999999999975199924677489----8999999999999999999999
Q 000851 670 WELLKLNAAEWPYAVLGSVGAILAGMEAPLFALGITHILTAFYSPHDSQIKRVV----DQVALIFVGLAVVTIPVYLLQH 745 (1253)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 745 (1253)
++++++.+++++.+.++.++..+..+..++.++.+..+++.............. ..+..+++++.++..++.++..
T Consensus 3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (578)
T 4a82_A 3 KRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQ 82 (578)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988999999999999999999999999999999999981687114677888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998399764334678746899999954999999998889999999999999999999996
Q 000851 746 YFYTLMGEHLTARVRLSMFSAILSNEIGWFDLDENNTGLLISTLAADATLVRSALADRLSIIVQNVALTVTAFVIAFILS 825 (1253)
Q Consensus 746 ~~~~~~~~~~~~~lr~~~~~~il~~~~~~f~~~~~~~G~l~~r~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~ 825 (1253)
+...+.+.++..++|.++|++++++|+.||+. +++|++++|+++|++.+++++...+..++.+++..+.++++++.++
T Consensus 83 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 83 YLAQWTSNKILYDIRKKLYNHLQALSARFYAN--NQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHT--SCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998789999768--9869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999995699999999999999999988116999970827999999999984899999999
Q 000851 826 WRLAAVVAASLPLLIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLR 905 (1253)
Q Consensus 826 ~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ir~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (1253)
|+++++.++.+|+++++.....+..++...+.++..++..+.+.|.++|+++||+|++++.+.++|.+..++..+...+.
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99998999999999999999999999999981698988899999999999999999998799999999989999997323
Q 000851 906 GHISGFGYGVSQLLSLCSYALGLWYASVLIKQKGSNFGDIMKSFMVLIITALAVAETLALAPDIVKGSQALGPVFGILYR 985 (1253)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 985 (1253)
.+..+...++..++..+..++++|+|.+++..+.+++|.+++++.+......|+..+...+..+..+..+.+|+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 35689999888545566674999968898799989654112038774896899984999968899999842378984189
Q 000851 986 KTAIQPDDPASKEVTEIKGNIELRNVSFKYPVRPDITIFENLNLKVSAGRSLAVVGQSGSGKSTVISLVMRFYDPISGTV 1065 (1253)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~iaIvG~SGSGKSTL~~lL~gl~~p~~G~I 1065 (1253)
+++..... ...+.++..+.|+++||+|+|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|
T Consensus 321 ~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 398 (578)
T 4a82_A 321 DYDIKNGV-GAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 398 (578)
T ss_dssp CCSSCCCT-TCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred CCCCCCCC-CCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 97666787-766667778807999999975899-9741343379987999999989999859999999846788999679
Q ss_pred EECCCCCCCCCHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99995179999787723328880678765213888850299887999999999990098999728787654225999988
Q 000851 1066 LIDGYDIRTLNLRSLRRKIGLVQQEPALFSTTIYENIKYGNEDASEIELMKATKAANAHGFISRMPEGYQSHVGDRGVQL 1145 (1253)
Q Consensus 1066 ~idG~di~~i~~~~lR~~i~~v~Qd~~LF~gTIreNL~~g~~~~s~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1145 (1253)
.+||.|+++++.+++|++++||||+|.+|++|++||+.++.++.++++++++++.++++++++++|+|+||.++++|.+|
T Consensus 399 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~L 478 (578)
T 4a82_A 399 LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKL 478 (578)
T ss_dssp EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTS
T ss_pred EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCC
T ss_conf 99999844278999960068992898347645999985279998899999999880959999757330102530688967
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCEEEEEECCEEEEECC
Q ss_conf 92499999999986059987897266689996989999999998728964999815911555048899995978988259
Q 000851 1146 SGGQKQRVAIARAILKNPSILLLDEATSALDTASENLIQEALDKLMEGRTTIMVAHRLSTIRNADKIAVLQQGKVAEIGS 1225 (1253)
Q Consensus 1146 SGGQrQRlaLARALlr~p~ILILDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IsHrl~~i~~aD~I~vl~~G~ive~G~ 1225 (1253)
|||||||++||||++++|+++|||||||+||+.+++.+++.+++..+++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 479 SgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 558 (578)
T 4a82_A 479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGT 558 (578)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999786545799999999999999808997999831789997199899998998999888
Q ss_pred HHHHHHCCCCHHHHHHHHHH
Q ss_conf 56895001623899999962
Q 000851 1226 HEQLLRKENGIYKQLIRLQQ 1245 (1253)
Q Consensus 1226 ~~eLl~~~~g~y~~l~~~~~ 1245 (1253)
|+||++ .++.|+++++.|.
T Consensus 559 ~~el~~-~~~~~~~~~~~q~ 577 (578)
T 4a82_A 559 HRELIA-KQGAYEHLYSIQN 577 (578)
T ss_dssp HHHHHH-TTSHHHHHHTTTT
T ss_pred HHHHHH-CCCHHHHHHHHHC
T ss_conf 999985-8838999998506
Done!